Phytanoyl-CoA dioxygenase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01490 AT2G01490 |
| fragaria_vesca | FvH4_4g32640 |
| malus_domestica | MD13G1023900.v1.1 MD16G1026600.v1.1 |
| prunus_persica | Prupe.1G326800_v2.0.a1 |
| pyrus_communis | pycom16g02240 |
| rosa_chinensis | RchiOBHm_Chr4g0441521 |
| rosa_laevigata | RLG00000006088 |
| rosa_roxburghii | Rroxscaffold_5G00382370 Rroxscaffold_7G00185860 |
| rosa_rugosa | Rorug04G0334400 Rorug06G0150600 |
| rosa_samantha | Rh4BG399900 Rh4CG414900 |
| rosa_wichuraiana | Rw4G033320 Rw6G022810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3003 |
| AccII | CGCG | 4 cut(s) | 213, 1618, 2127, 2851 |
| AccIII | TCCGGA | 1 cut(s) | 2724 |
| AciI | CCGC | 6 cut(s) | 671, 1906, 2125, 2357, 2851, 2955 |
| AclI | AACGTT | 2 cut(s) | 634, 2152 |
| AclWI | GGATC | 6 cut(s) | 1032, 2268, 2281, 2437, 2909, 2927 |
| AcoI | YGGCCR | 2 cut(s) | 1682, 1988 |
| AcsI | RAATTY | 9 cut(s) | 709, 1330, 1358, 1927, 2183, 2220, 2589, 2720, 3254 |
| AcuI | CTGAAG | 3 cut(s) | 380, 1120, 1349 |
| AcvI | CACGTG | 1 cut(s) | 1688 |
| AcyI | GRCGYC | 2 cut(s) | 1448, 2882 |
| AfaI | GTAC | 4 cut(s) | 345, 2320, 2424, 2803 |
| AfeI | AGCGCT | 1 cut(s) | 2564 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 69, 214, 1011, 1443, 2519, 2620, 2894 |
| AflII | CTTAAG | 1 cut(s) | 2402 |
| AflIII | ACRYGT | 1 cut(s) | 1935 |
| AgeI | ACCGGT | 1 cut(s) | 2620 |
| AhlI | ACTAGT | 1 cut(s) | 1228 |
| AjnI | CCWGG | 5 cut(s) | 183, 598, 1442, 1532, 2366 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1984, 2016 |
| AleI | CACNNNNGTG | 2 cut(s) | 146, 2329 |
| Alw26I | GTCTC | 6 cut(s) | 3, 1158, 2494, 2889, 2984, 3330 |
| AlwI | GGATC | 6 cut(s) | 1032, 2268, 2281, 2437, 2909, 2927 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2936 |
| Ama87I | CYCGRG | 1 cut(s) | 282 |
| Aor13HI | TCCGGA | 1 cut(s) | 2724 |
| Aor51HI | AGCGCT | 1 cut(s) | 2564 |
| AoxI | GGCC | 8 cut(s) | 72, 602, 1551, 1682, 1988, 2108, 2255, 2853 |
| ApaI | GGGCCC | 1 cut(s) | 2857 |
| ApoI | RAATTY | 9 cut(s) | 709, 1330, 1358, 1927, 2183, 2220, 2589, 2720, 3254 |
| AseI | ATTAAT | 1 cut(s) | 2748 |
| AsiGI | ACCGGT | 1 cut(s) | 2620 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1203, 1432, 2205, 2393 |
| AspA2I | CCTAGG | 1 cut(s) | 2986 |
| AspLEI | GCGC | 3 cut(s) | 1618, 2565, 2851 |
| AsuC2I | CCSGG | 4 cut(s) | 404, 1565, 2813, 2895 |
| AsuHPI | GGTGA | 7 cut(s) | 128, 317, 505, 855, 1885, 2036, 2486 |
| AsuII | TTCGAA | 1 cut(s) | 2600 |
| AsuNHI | GCTAGC | 2 cut(s) | 295, 2647 |
| AvaI | CYCGRG | 1 cut(s) | 282 |
| AvaII | GGWCC | 6 cut(s) | 188, 400, 457, 1741, 1968, 2312 |
| AvrII | CCTAGG | 1 cut(s) | 2986 |
| AxyI | CCTNAGG | 1 cut(s) | 1794 |
| BaeGI | GKGCMC | 2 cut(s) | 598, 2857 |
| BalI | TGGCCA | 2 cut(s) | 1684, 1990 |
| BamHI | GGATCC | 1 cut(s) | 2273 |
| BanII | GRGCYC | 1 cut(s) | 2857 |
| BbrPI | CACGTG | 1 cut(s) | 1688 |
| BbsI | GAAGAC | 2 cut(s) | 144, 2208 |
| BceAI | ACGGC | 1 cut(s) | 2301 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 203, 237, 542, 576, 1885, 1919 |
| BciT130I | CCWGG | 5 cut(s) | 185, 600, 1444, 1534, 2368 |
| BciVI | GTATCC | 1 cut(s) | 3176 |
| BclI | TGATCA | 1 cut(s) | 336 |
| BcnI | CCSGG | 4 cut(s) | 404, 1565, 2813, 2895 |
| BcoDI | GTCTC | 6 cut(s) | 3, 1158, 2494, 2889, 2984, 3330 |
| BcuI | ACTAGT | 1 cut(s) | 1228 |
| BfmI | CTRYAG | 3 cut(s) | 2426, 2558, 2805 |
| BfoI | RGCGCY | 1 cut(s) | 2566 |
| BfrI | CTTAAG | 1 cut(s) | 2402 |
| BfuI | GTATCC | 1 cut(s) | 3176 |
| BglII | AGATCT | 1 cut(s) | 893 |
| BlnI | CCTAGG | 1 cut(s) | 2986 |
| Bme1390I | CCNGG | 9 cut(s) | 185, 404, 600, 1444, 1534, 1565, 2368, 2813, 2895 |
| Bme18I | GGWCC | 6 cut(s) | 188, 400, 457, 1741, 1968, 2312 |
| BmeT110I | CYCGRG | 1 cut(s) | 282 |
| BmiI | GGNNCC | 9 cut(s) | 189, 402, 459, 1512, 1742, 1743, 2275, 2855, 2856 |
| BmrFI | CCNGG | 9 cut(s) | 185, 404, 600, 1444, 1534, 1565, 2368, 2813, 2895 |
| BmrI | ACTGGG | 1 cut(s) | 836 |
| BmsI | GCATC | 8 cut(s) | 433, 742, 1482, 1547, 1562, 1707, 1850, 2046 |
| BmtI | GCTAGC | 2 cut(s) | 299, 2651 |
| BmuI | ACTGGG | 1 cut(s) | 836 |
| BpiI | GAAGAC | 2 cut(s) | 144, 2208 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 509, 541 |
| BpmI | CTGGAG | 1 cut(s) | 703 |
| Bpu14I | TTCGAA | 1 cut(s) | 2600 |
| BpuEI | CTTGAG | 2 cut(s) | 2198, 2348 |
| BpuMI | CCSGG | 4 cut(s) | 404, 1565, 2813, 2895 |
| BsaAI | YACGTR | 1 cut(s) | 1688 |
| BsaBI | GATNNNNATC | 1 cut(s) | 123 |
| BsaHI | GRCGYC | 2 cut(s) | 1448, 2882 |
| BsaI | GGTCTC | 3 cut(s) | 1158, 2494, 2984 |
| BsaWI | WCCGGW | 3 cut(s) | 309, 2620, 2724 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3148, 3178 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 69, 214, 1011, 1443, 2519, 2620, 2894 |
| Bse118I | RCCGGY | 1 cut(s) | 2620 |
| Bse1I | ACTGG | 4 cut(s) | 720, 842, 984, 2314 |
| Bse21I | CCTNAGG | 1 cut(s) | 1794 |
| Bse3DI | GCAATG | 2 cut(s) | 970, 3075 |
| Bse8I | GATNNNNATC | 1 cut(s) | 123 |
| BseAI | TCCGGA | 1 cut(s) | 2724 |
| BseBI | CCWGG | 5 cut(s) | 185, 600, 1444, 1534, 2368 |
| BseJI | GATNNNNATC | 1 cut(s) | 123 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 69, 214, 1011, 1443, 2519, 2620, 2894 |
| BseMI | GCAATG | 2 cut(s) | 970, 3075 |
| BseMII | CTCAG | 6 cut(s) | 1025, 1039, 1222, 1398, 2000, 2580 |
| BseNI | ACTGG | 4 cut(s) | 720, 842, 984, 2314 |
| BseRI | GAGGAG | 2 cut(s) | 533, 1164 |
| BseSI | GKGCMC | 2 cut(s) | 598, 2857 |
| BseYI | CCCAGC | 2 cut(s) | 1863, 2827 |
| BsgI | GTGCAG | 2 cut(s) | 2165, 2381 |
| Bsh1236I | CGCG | 4 cut(s) | 213, 1618, 2127, 2851 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1349 |
| BshFI | GGCC | 8 cut(s) | 74, 604, 1553, 1684, 1990, 2110, 2257, 2855 |
| BshTI | ACCGGT | 1 cut(s) | 2620 |
| BsiEI | CGRYCG | 1 cut(s) | 1349 |
| BsiHKCI | CYCGRG | 1 cut(s) | 282 |
| BsiSI | CCGG | 8 cut(s) | 310, 404, 1564, 2271, 2621, 2725, 2813, 2894 |
| BslFI | GGGAC | 4 cut(s) | 1132, 1515, 1754, 2999 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 69, 214, 1011, 1443, 2519, 2620, 2894 |
| BsmAI | GTCTC | 6 cut(s) | 3, 1158, 2494, 2889, 2984, 3330 |
| BsmBI | CGTCTC | 1 cut(s) | 2889 |
| BsmFI | GGGAC | 4 cut(s) | 1132, 1515, 1754, 2999 |
| BsmI | GAATGC | 1 cut(s) | 1432 |
| BsnI | GGCC | 8 cut(s) | 74, 604, 1553, 1684, 1990, 2110, 2257, 2855 |
| Bso31I | GGTCTC | 3 cut(s) | 1158, 2494, 2984 |
| BsoBI | CYCGRG | 1 cut(s) | 282 |
| Bsp119I | TTCGAA | 1 cut(s) | 2600 |
| Bsp120I | GGGCCC | 1 cut(s) | 2853 |
| Bsp1286I | GDGCHC | 2 cut(s) | 598, 2857 |
| Bsp13I | TCCGGA | 1 cut(s) | 2724 |
| Bsp68I | TCGCGA | 1 cut(s) | 213 |
| BspACI | CCGC | 6 cut(s) | 671, 1906, 2125, 2357, 2851, 2955 |
| BspANI | GGCC | 8 cut(s) | 74, 604, 1553, 1684, 1990, 2110, 2257, 2855 |
| BspCNI | CTCAG | 6 cut(s) | 1026, 1038, 1221, 1397, 2001, 2579 |
| BspEI | TCCGGA | 1 cut(s) | 2724 |
| BspFNI | CGCG | 4 cut(s) | 213, 1618, 2127, 2851 |
| BspLI | GGNNCC | 9 cut(s) | 189, 402, 459, 1512, 1742, 1743, 2275, 2855, 2856 |
| BspMAI | CTGCAG | 2 cut(s) | 2430, 2562 |
| BspOI | GCTAGC | 2 cut(s) | 299, 2651 |
| BspPI | GGATC | 6 cut(s) | 1032, 2268, 2281, 2437, 2909, 2927 |
| BspT104I | TTCGAA | 1 cut(s) | 2600 |
| BspTI | CTTAAG | 1 cut(s) | 2402 |
| BspTNI | GGTCTC | 3 cut(s) | 1158, 2494, 2984 |
| BsrDI | GCAATG | 2 cut(s) | 970, 3075 |
| BsrFI | RCCGGY | 1 cut(s) | 2620 |
| BsrI | ACTGG | 4 cut(s) | 720, 842, 984, 2314 |
| BssAI | RCCGGY | 1 cut(s) | 2620 |
| BssNI | GRCGYC | 2 cut(s) | 1448, 2882 |
| BssT1I | CCWWGG | 3 cut(s) | 2986, 3152, 3170 |
| Bst2UI | CCWGG | 5 cut(s) | 185, 600, 1444, 1534, 2368 |
| Bst6I | CTCTTC | 3 cut(s) | 532, 2428, 2987 |
| BstACI | GRCGYC | 2 cut(s) | 1448, 2882 |
| BstAFI | CTTAAG | 1 cut(s) | 2402 |
| BstBAI | YACGTR | 1 cut(s) | 1688 |
| BstBI | TTCGAA | 1 cut(s) | 2600 |
| BstC8I | GCNNGC | 8 cut(s) | 37, 57, 297, 1598, 2649, 2853, 2947, 3262 |
| BstEII | GGTNACC | 1 cut(s) | 305 |
| BstFNI | CGCG | 4 cut(s) | 213, 1618, 2127, 2851 |
| BstH2I | RGCGCY | 1 cut(s) | 2566 |
| BstHHI | GCGC | 3 cut(s) | 1618, 2565, 2851 |
| BstMAI | GTCTC | 6 cut(s) | 3, 1158, 2494, 2889, 2984, 3330 |
| BstMCI | CGRYCG | 1 cut(s) | 1349 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1565, 2457, 2466 |
| BstNI | CCWGG | 5 cut(s) | 185, 600, 1444, 1534, 2368 |
| BstNSI | RCATGY | 1 cut(s) | 1600 |
| BstPI | GGTNACC | 1 cut(s) | 305 |
| BstSCI | CCNGG | 9 cut(s) | 183, 402, 598, 1442, 1532, 1563, 2366, 2811, 2893 |
| BstSFI | CTRYAG | 3 cut(s) | 2426, 2558, 2805 |
| BstSLI | GKGCMC | 2 cut(s) | 598, 2857 |
| BstUI | CGCG | 4 cut(s) | 213, 1618, 2127, 2851 |
| BstV2I | GAAGAC | 2 cut(s) | 144, 2208 |
| BstX2I | RGATCY | 5 cut(s) | 893, 1037, 2273, 2442, 2932 |
| BstYI | RGATCY | 5 cut(s) | 893, 1037, 2273, 2442, 2932 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1794 |
| BsuI | GTATCC | 1 cut(s) | 3176 |
| BsuRI | GGCC | 8 cut(s) | 74, 604, 1553, 1684, 1990, 2110, 2257, 2855 |
| BtgZI | GCGATG | 3 cut(s) | 194, 1540, 2783 |
| BtsIMutI | CAGTG | 6 cut(s) | 438, 849, 1116, 1458, 2244, 2307 |
| BtuMI | TCGCGA | 1 cut(s) | 213 |
| Cac8I | GCNNGC | 8 cut(s) | 37, 57, 297, 1598, 2649, 2853, 2947, 3262 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2936 |
| CfoI | GCGC | 3 cut(s) | 1618, 2565, 2851 |
| Cfr10I | RCCGGY | 1 cut(s) | 2620 |
| CseI | GACGC | 3 cut(s) | 1437, 1607, 2871 |
| Csp6I | GTAC | 4 cut(s) | 344, 2319, 2423, 2802 |
| CspAI | ACCGGT | 1 cut(s) | 2620 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1674, 1709 |
| CviAII | CATG | 9 cut(s) | 253, 334, 422, 1321, 1597, 2236, 2410, 2535, 3089 |
| CviQI | GTAC | 4 cut(s) | 344, 2319, 2423, 2802 |
| DraI | TTTAAA | 2 cut(s) | 2734, 2758 |
| EaeI | YGGCCR | 2 cut(s) | 1682, 1988 |
| Eam1104I | CTCTTC | 3 cut(s) | 532, 2428, 2987 |
| EarI | CTCTTC | 3 cut(s) | 532, 2428, 2987 |
| EciI | GGCGGA | 1 cut(s) | 2970 |
| Eco130I | CCWWGG | 3 cut(s) | 2986, 3152, 3170 |
| Eco24I | GRGCYC | 1 cut(s) | 2857 |
| Eco31I | GGTCTC | 3 cut(s) | 1158, 2494, 2984 |
| Eco32I | GATATC | 2 cut(s) | 985, 3216 |
| Eco47I | GGWCC | 6 cut(s) | 188, 400, 457, 1741, 1968, 2312 |
| Eco47III | AGCGCT | 1 cut(s) | 2564 |
| Eco57I | CTGAAG | 3 cut(s) | 380, 1120, 1349 |
| Eco72I | CACGTG | 1 cut(s) | 1688 |
| Eco81I | CCTNAGG | 1 cut(s) | 1794 |
| Eco88I | CYCGRG | 1 cut(s) | 282 |
| Eco91I | GGTNACC | 1 cut(s) | 305 |
| EcoO109I | RGGNCCY | 4 cut(s) | 400, 457, 1741, 2854 |
| EcoO65I | GGTNACC | 1 cut(s) | 305 |
| EcoRI | GAATTC | 2 cut(s) | 1330, 2720 |
| EcoRII | CCWGG | 5 cut(s) | 183, 598, 1442, 1532, 2366 |
| EcoRV | GATATC | 2 cut(s) | 985, 3216 |
| EcoT14I | CCWWGG | 3 cut(s) | 2986, 3152, 3170 |
| EcoT22I | ATGCAT | 1 cut(s) | 3244 |
| EcoT38I | GRGCYC | 1 cut(s) | 2857 |
| ErhI | CCWWGG | 3 cut(s) | 2986, 3152, 3170 |
| Esp3I | CGTCTC | 1 cut(s) | 2889 |
| FaeI | CATG | 9 cut(s) | 256, 337, 425, 1324, 1600, 2239, 2413, 2538, 3092 |
| FaqI | GGGAC | 4 cut(s) | 1132, 1515, 1754, 2999 |
| FatI | CATG | 9 cut(s) | 252, 333, 421, 1320, 1596, 2235, 2409, 2534, 3088 |
| FauI | CCCGC | 2 cut(s) | 1899, 2844 |
| FbaI | TGATCA | 1 cut(s) | 336 |
| FriOI | GRGCYC | 1 cut(s) | 2857 |
| GlaI | GCGC | 3 cut(s) | 1617, 2564, 2850 |
| GsaI | CCCAGC | 2 cut(s) | 1867, 2831 |
| GsuI | CTGGAG | 1 cut(s) | 703 |
| HaeII | RGCGCY | 1 cut(s) | 2566 |
| HaeIII | GGCC | 8 cut(s) | 74, 604, 1553, 1684, 1990, 2110, 2257, 2855 |
| HapII | CCGG | 8 cut(s) | 310, 404, 1564, 2271, 2621, 2725, 2813, 2894 |
| HgaI | GACGC | 3 cut(s) | 1437, 1607, 2871 |
| HhaI | GCGC | 3 cut(s) | 1618, 2565, 2851 |
| Hin1I | GRCGYC | 2 cut(s) | 1448, 2882 |
| Hin1II | CATG | 9 cut(s) | 256, 337, 425, 1324, 1600, 2239, 2413, 2538, 3092 |
| Hin6I | GCGC | 3 cut(s) | 1616, 2563, 2849 |
| HinP1I | GCGC | 3 cut(s) | 1616, 2563, 2849 |
| HincII | GTYRAC | 2 cut(s) | 23, 2416 |
| HindII | GTYRAC | 2 cut(s) | 23, 2416 |
| HindIII | AAGCTT | 1 cut(s) | 1271 |
| HpaII | CCGG | 8 cut(s) | 310, 404, 1564, 2271, 2621, 2725, 2813, 2894 |
| HphI | GGTGA | 7 cut(s) | 128, 317, 505, 855, 1885, 2036, 2486 |
| Hpy166II | GTNNAC | 5 cut(s) | 23, 1675, 2416, 2532, 2865 |
| Hpy8I | GTNNAC | 5 cut(s) | 23, 1675, 2416, 2532, 2865 |
| HpyCH4IV | ACGT | 7 cut(s) | 169, 634, 1462, 1687, 1937, 2152, 3079 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1565, 2457, 2466 |
| HpySE526I | ACGT | 7 cut(s) | 169, 634, 1462, 1687, 1937, 2152, 3079 |
| Hsp92I | GRCGYC | 2 cut(s) | 1448, 2882 |
| Hsp92II | CATG | 9 cut(s) | 256, 337, 425, 1324, 1600, 2239, 2413, 2538, 3092 |
| HspAI | GCGC | 3 cut(s) | 1616, 2563, 2849 |
| KflI | GGGWCCC | 1 cut(s) | 1741 |
| Kpn2I | TCCGGA | 1 cut(s) | 2724 |
| Ksp22I | TGATCA | 1 cut(s) | 336 |
| LmnI | GCTCC | 4 cut(s) | 1757, 2034, 2456, 2788 |
| LweI | GCATC | 8 cut(s) | 433, 742, 1482, 1547, 1562, 1707, 1850, 2046 |
| MaeII | ACGT | 7 cut(s) | 169, 634, 1462, 1687, 1937, 2152, 3079 |
| MfeI | CAATTG | 1 cut(s) | 2056 |
| MflI | RGATCY | 5 cut(s) | 893, 1037, 2273, 2442, 2932 |
| MhlI | GDGCHC | 2 cut(s) | 598, 2857 |
| MlsI | TGGCCA | 2 cut(s) | 1684, 1990 |
| MluNI | TGGCCA | 2 cut(s) | 1684, 1990 |
| MlyI | GAGTC | 3 cut(s) | 1114, 1537, 3079 |
| MmeI | TCCRAC | 7 cut(s) | 77, 361, 2366, 2551, 2879, 3062, 3078 |
| Mox20I | TGGCCA | 2 cut(s) | 1684, 1990 |
| Mph1103I | ATGCAT | 1 cut(s) | 3244 |
| MroI | TCCGGA | 1 cut(s) | 2724 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1203, 1432, 2205, 2393 |
| MscI | TGGCCA | 2 cut(s) | 1684, 1990 |
| MslI | CAYNNNNRTG | 3 cut(s) | 146, 925, 2329 |
| Msp20I | TGGCCA | 2 cut(s) | 1684, 1990 |
| MspCI | CTTAAG | 1 cut(s) | 2402 |
| MspI | CCGG | 8 cut(s) | 310, 404, 1564, 2271, 2621, 2725, 2813, 2894 |
| MspR9I | CCNGG | 9 cut(s) | 185, 404, 600, 1444, 1534, 1565, 2368, 2813, 2895 |
| MunI | CAATTG | 1 cut(s) | 2056 |
| Mva1269I | GAATGC | 1 cut(s) | 1432 |
| MvaI | CCWGG | 5 cut(s) | 185, 600, 1444, 1534, 2368 |
| MvnI | CGCG | 4 cut(s) | 213, 1618, 2127, 2851 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1565, 2457, 2466 |
| NciI | CCSGG | 4 cut(s) | 404, 1565, 2813, 2895 |
| NheI | GCTAGC | 2 cut(s) | 295, 2647 |
| NlaIII | CATG | 9 cut(s) | 256, 337, 425, 1324, 1600, 2239, 2413, 2538, 3092 |
| NlaIV | GGNNCC | 9 cut(s) | 189, 402, 459, 1512, 1742, 1743, 2275, 2855, 2856 |
| NmuCI | GTSAC | 6 cut(s) | 305, 508, 861, 1873, 2120, 2132 |
| NruI | TCGCGA | 1 cut(s) | 213 |
| NsiI | ATGCAT | 1 cut(s) | 3244 |
| NspI | RCATGY | 1 cut(s) | 1600 |
| NspV | TTCGAA | 1 cut(s) | 2600 |
| OliI | CACNNNNGTG | 2 cut(s) | 146, 2329 |
| PaeI | GCATGC | 1 cut(s) | 1600 |
| PaeR7I | CTCGAG | 1 cut(s) | 282 |
| PasI | CCCWGGG | 3 cut(s) | 599, 1443, 1533 |
| PctI | GAATGC | 1 cut(s) | 1432 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1203, 1432, 2205, 2393 |
| PflFI | GACNNNGTC | 1 cut(s) | 2246 |
| PinAI | ACCGGT | 1 cut(s) | 2620 |
| PleI | GAGTC | 3 cut(s) | 1114, 1536, 3079 |
| PmaCI | CACGTG | 1 cut(s) | 1688 |
| PmlI | CACGTG | 1 cut(s) | 1688 |
| PpsI | GAGTC | 3 cut(s) | 1114, 1536, 3079 |
| Ppu21I | YACGTR | 1 cut(s) | 1688 |
| PpuMI | RGGWCCY | 3 cut(s) | 400, 457, 1741 |
| PshBI | ATTAAT | 1 cut(s) | 2748 |
| PsiI | TTATAA | 1 cut(s) | 3003 |
| Psp1406I | AACGTT | 2 cut(s) | 634, 2152 |
| Psp5II | RGGWCCY | 3 cut(s) | 400, 457, 1741 |
| Psp6I | CCWGG | 5 cut(s) | 183, 598, 1442, 1532, 2366 |
| PspCI | CACGTG | 1 cut(s) | 1688 |
| PspEI | GGTNACC | 1 cut(s) | 305 |
| PspFI | CCCAGC | 2 cut(s) | 1863, 2827 |
| PspGI | CCWGG | 5 cut(s) | 183, 598, 1442, 1532, 2366 |
| PspN4I | GGNNCC | 9 cut(s) | 189, 402, 459, 1512, 1742, 1743, 2275, 2855, 2856 |
| PspOMI | GGGCCC | 1 cut(s) | 2853 |
| PspPPI | RGGWCCY | 3 cut(s) | 400, 457, 1741 |
| PspXI | VCTCGAGB | 1 cut(s) | 282 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3170, 3202 |
| PstI | CTGCAG | 2 cut(s) | 2430, 2562 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2936 |
| PsuI | RGATCY | 5 cut(s) | 893, 1037, 2273, 2442, 2932 |
| PsyI | GACNNNGTC | 1 cut(s) | 2246 |
| RruI | TCGCGA | 1 cut(s) | 213 |
| RsaI | GTAC | 4 cut(s) | 345, 2320, 2424, 2803 |
| RsaNI | GTAC | 4 cut(s) | 344, 2319, 2423, 2802 |
| RseI | CAYNNNNRTG | 3 cut(s) | 146, 925, 2329 |
| SchI | GAGTC | 3 cut(s) | 1114, 1537, 3079 |
| ScrFI | CCNGG | 9 cut(s) | 185, 404, 600, 1444, 1534, 1565, 2368, 2813, 2895 |
| SduI | GDGCHC | 2 cut(s) | 598, 2857 |
| SfaNI | GCATC | 8 cut(s) | 433, 742, 1482, 1547, 1562, 1707, 1850, 2046 |
| SfcI | CTRYAG | 3 cut(s) | 2426, 2558, 2805 |
| Sfr274I | CTCGAG | 1 cut(s) | 282 |
| SfuI | TTCGAA | 1 cut(s) | 2600 |
| SinI | GGWCC | 6 cut(s) | 188, 400, 457, 1741, 1968, 2312 |
| SlaI | CTCGAG | 1 cut(s) | 282 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 146, 925, 2329 |
| SmlI | CTYRAG | 4 cut(s) | 282, 2177, 2327, 2402 |
| SmoI | CTYRAG | 4 cut(s) | 282, 2177, 2327, 2402 |
| SpeI | ACTAGT | 1 cut(s) | 1228 |
| SphI | GCATGC | 1 cut(s) | 1600 |
| SsiI | CCGC | 6 cut(s) | 671, 1906, 2125, 2357, 2851, 2955 |
| SspI | AATATT | 1 cut(s) | 1825 |
| StyD4I | CCNGG | 9 cut(s) | 183, 402, 598, 1442, 1532, 1563, 2366, 2811, 2893 |
| StyI | CCWWGG | 3 cut(s) | 2986, 3152, 3170 |
| TaiI | ACGT | 7 cut(s) | 172, 637, 1465, 1690, 1940, 2155, 3082 |
| TaqI | TCGA | 5 cut(s) | 283, 289, 1895, 2554, 2600 |
| TaqII | GACCGA | 2 cut(s) | 1627, 2476 |
| TatI | WGTACW | 1 cut(s) | 2318 |
| TscAI | CASTG | 6 cut(s) | 445, 849, 1116, 1458, 2251, 2314 |
| TseFI | GTSAC | 6 cut(s) | 305, 508, 861, 1873, 2120, 2132 |
| Tsp45I | GTSAC | 6 cut(s) | 305, 508, 861, 1873, 2120, 2132 |
| TspDTI | ATGAA | 6 cut(s) | 947, 1265, 1309, 2624, 2734, 3191 |
| TspGWI | ACGGA | 4 cut(s) | 260, 361, 2701, 2930 |
| TspRI | CASTG | 6 cut(s) | 445, 849, 1116, 1458, 2251, 2314 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2246 |
| Vha464I | CTTAAG | 1 cut(s) | 2402 |
| VpaK11BI | GGWCC | 6 cut(s) | 188, 400, 457, 1741, 1968, 2312 |
| VspI | ATTAAT | 1 cut(s) | 2748 |
| XapI | RAATTY | 9 cut(s) | 709, 1330, 1358, 1927, 2183, 2220, 2589, 2720, 3254 |
| XbaI | TCTAGA | 3 cut(s) | 1145, 1334, 3347 |
| XceI | RCATGY | 1 cut(s) | 1600 |
| XhoI | CTCGAG | 1 cut(s) | 282 |
| XmaJI | CCTAGG | 1 cut(s) | 2986 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1203, 1432, 2205, 2393 |
| Zsp2I | ATGCAT | 1 cut(s) | 3244 |