Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0010960

Physical Location & Seq

Genomic Coordinates Forward (+)

32846665 .. 32848011

Gene Structure 1347 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0205900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1278 bp

ATGGCAGTGCGACTGGCTGCATCTTTGGGACTGGTGGATGCACGCCGGCCGGTCGACCTGCGGCCTTCTCATGGTGAAGGATTACGTCGATCACAGACGTACCTTGTGGGGAAACTTTTGATAGCCAGAGCTTTCAACAAGAGATCCTTTATGGGGATGTTACGGCGAGCATGGCGGCTGAATGGTCGATACACCGTCCAAGAGCATGATGACCACTTACTCTTCACCTTGTCGGACCCAACTGATCGTAACTGGATTCTTCGGGGTGGTCCGTGGGGTTTTGACAGAGCCCCGATCAAGGTGCGTGGATCACCGCCGGATTTTCACAAGGATCGCTGCCTTAGGAGGATAGGCAGTGCCATAGGTCGGTTTGTTCAAAAGGATACCACAGAGTTTGATGCAGGCAGAATCCAGATTCGGGTTGAGTTGGACCTGCTGCAACGTATCATATTTCGACGTAGTTTCACGGTAGATGATGGTATTATGGTGGATTTGGAATTCTTCTTCGAGAATTTGTATGGTAGGTGCAGGGACTGTGGACTTGTCACCCATGTTGGCTTGCCGTGTTCTGGAACTCCTTTGCCTGTAGAGCTGCAAATTGATACTCCTGTAGCACGTAGAAACTTGGAGCGTGCTTTGAACCAGGTGGGTGTGATACAGCCGGCTGGGCCAATGTTGGTTTTTGGGGCACAGAATACCCCCCAGGTTGGGTTAGAGAGGTTTATGCCGACTGTTAAACCTAAGATGCGGAAAGAAATACGTCGGAGGCCTTCTGTTGGCAGTGGAGAGGGGAGCTCTGGGGTGCAGACAAATTCCAATGCGACGGAGCTTGATGGTGGTAGTGAGCCAAAGTCTAATGGCTCAGGCAAGGGGTTAGGTGGAGCAGACAGTTCGACAGAACATGCATCCAATCATGCCATGCATTCTCCTAGTTGTGGAATGCGTCGTAAGCGTATGGATGAAGATGAGATTTCTCCAAAGAAGCCGCGATTGAGTTTGGCAGTTGGAAGAACTAATTTGGATGCCATGACCATGGGGTTGTGCAATGTAAAGCCAGCTGAGAAGGTATACAAGAAGAGAGGTAGGCCAAAAGGTACAAAAAACAAAGCTAAGGAACTCAAGGTTGTTCAAGTATCTCCTATGGAAAAGTCTCCATCAAAGAAGAGTAAGTCTCCAAGAAAAGCGGAAAAAATGGTGAATGGTCTGCCAGAGTTTACTCTAGTTGAGGTTGTCAGTGGTTCTAACCCGTCTAAGGGGAAGGAACCTATAGTTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003824 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009653 GO:0009987 GO:0010016 GO:0010223 GO:0010346 GO:0010817 GO:0016106 GO:0016114 GO:0016853 GO:0016859 GO:0018130 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0048367 GO:0048646 GO:0048731 GO:0048856 GO:0065007 GO:0065008 GO:0071704 GO:1901334 GO:1901336 GO:1901360 GO:1901362 GO:1901576 GO:1901600 GO:1901601 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00906 map00906

Pfam Domains

Protein Families

DUF4033

Protein Analysis

425

Amino Acids

47.06

Weight (kDa)

10.19

Isoelectric Point (pI)

47.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4283	PF14111	32 - 102	1.7e-06	Domain of unknown function (DUF4283)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010960)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03055 AT1G03055
fragaria_vesca	FvH4_2g22790
malus_domestica	MD03G1256200.v1.1 MD11G1277000.v1.1
prunus_persica	Prupe.8G233300_v2.0.a1
pyrus_communis	pycom11g24500
rosa_chinensis	RchiOBHm_Chr6g0289711
rosa_laevigata	RLG00000012273
rosa_multiflora	Rmu_sc0005640.1_g000030
rosa_roxburghii	Rroxscaffold_7G00177620 Rroxscaffold_7G00178120
rosa_rugosa	Rorug06G0205900 Rorug06G0206000 Rorug06G0206000
rosa_samantha	Rh6AG317600 Rh6BG325200 Rh6CG330800 Rh6DG316500
rosa_wichuraiana	Rw6G027390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	66, 441
AccI	GTMKAC	2 cut(s)	54, 1068
AccII	CGCG	1 cut(s)	988
AciI	CCGC	6 cut(s)	61, 175, 314, 748, 986, 1184
AclWI	GGATC	3 cut(s)	138, 316, 339
AcoI	YGGCCR	1 cut(s)	47
AcsI	RAATTY	3 cut(s)	497, 511, 811
AfaI	GTAC	2 cut(s)	101, 1096
AgsI	TTSAA	4 cut(s)	136, 377, 640, 1130
AjnI	CCWGG	2 cut(s)	642, 702
AluBI	AGCT	6 cut(s)	131, 592, 795, 829, 1058, 1109
AluI	AGCT	6 cut(s)	131, 592, 795, 829, 1058, 1109
Alw21I	GWGCWC	1 cut(s)	797
Alw26I	GTCTC	2 cut(s)	1155, 1176
AlwI	GGATC	3 cut(s)	138, 316, 339
AlwNI	CAGNNNCTG	1 cut(s)	534
AoxI	GGCC	5 cut(s)	47, 62, 668, 767, 1085
ApeKI	GCWGC	4 cut(s)	17, 336, 436, 592
ApoI	RAATTY	3 cut(s)	497, 511, 811
AspS9I	GGNCC	4 cut(s)	235, 269, 430, 668
AsuHPI	GGTGA	5 cut(s)	86, 217, 303, 538, 1207
AvaII	GGWCC	3 cut(s)	235, 269, 430
AxyI	CCTNAGG	1 cut(s)	341
BaeGI	GKGCMC	1 cut(s)	691
BaeI	ACNNNNGTAYC	4 cut(s)	83, 116, 594, 627
BanII	GRGCYC	2 cut(s)	292, 797
Bbv12I	GWGCWC	1 cut(s)	797
BbvI	GCAGC	4 cut(s)	4, 323, 423, 579
BccI	CCATC	3 cut(s)	470, 827, 1162
BceAI	ACGGC	2 cut(s)	179, 547
BcgI	CGANNNNNNTGC	4 cut(s)	283, 317, 873, 907
BciT130I	CCWGG	2 cut(s)	644, 704
BciVI	GTATCC	1 cut(s)	376
BcoDI	GTCTC	2 cut(s)	1155, 1176
BfaI	CTAG	2 cut(s)	930, 1220
BfmI	CTRYAG	3 cut(s)	585, 609, 1266
BfuAI	ACCTGC	2 cut(s)	66, 441
BfuI	GTATCC	1 cut(s)	376
BglI	GCCNNNNNGGC	1 cut(s)	667
BisI	GCNGC	7 cut(s)	18, 62, 176, 337, 437, 593, 986
BlsI	GCNGC	7 cut(s)	19, 63, 177, 338, 438, 594, 987
Bme1390I	CCNGG	2 cut(s)	644, 704
Bme18I	GGWCC	3 cut(s)	235, 269, 430
BmgT120I	GGNCC	4 cut(s)	235, 269, 430, 668
BmiI	GGNNCC	2 cut(s)	237, 1263
BmrFI	CCNGG	2 cut(s)	644, 704
BmsI	GCATC	6 cut(s)	28, 29, 388, 735, 914, 1012
BplI	GAGNNNNNCTC	4 cut(s)	779, 811, 1156, 1188
Bpu10I	CCTNAGC	2 cut(s)	862, 1110
BpuEI	CTTGAG	1 cut(s)	1103
BsaAI	YACGTR	1 cut(s)	617
BsaJI	CCNNGG	3 cut(s)	272, 702, 1032
Bse118I	RCCGGY	3 cut(s)	45, 49, 661
Bse1I	ACTGG	3 cut(s)	18, 36, 257
Bse21I	CCTNAGG	1 cut(s)	341
Bse3DI	GCAATG	1 cut(s)	1051
BseBI	CCWGG	2 cut(s)	644, 704
BseDI	CCNNGG	3 cut(s)	272, 702, 1032
BseGI	GGATG	5 cut(s)	43, 162, 905, 964, 1027
BseMI	GCAATG	1 cut(s)	1051
BseMII	CTCAG	2 cut(s)	876, 1050
BseNI	ACTGG	3 cut(s)	18, 36, 257
BseSI	GKGCMC	1 cut(s)	691
BseX3I	CGGCCG	1 cut(s)	47
BseXI	GCAGC	4 cut(s)	4, 323, 423, 579
BseYI	CCCAGC	1 cut(s)	665
BsgI	GTGCAG	2 cut(s)	547, 824
Bsh1236I	CGCG	1 cut(s)	988
Bsh1285I	CGRYCG	2 cut(s)	50, 54
BshFI	GGCC	5 cut(s)	49, 64, 670, 769, 1087
BsiEI	CGRYCG	2 cut(s)	50, 54
BsiHKAI	GWGCWC	1 cut(s)	797
BsiSI	CCGG	4 cut(s)	46, 50, 317, 662
BslFI	GGGAC	2 cut(s)	42, 545
BsmAI	GTCTC	2 cut(s)	1155, 1176
BsmFI	GGGAC	2 cut(s)	42, 545
BsmI	GAATGC	2 cut(s)	922, 945
BsnI	GGCC	5 cut(s)	49, 64, 670, 769, 1087
Bsp1286I	GDGCHC	3 cut(s)	292, 691, 797
Bsp143I	GATC	6 cut(s)	89, 143, 244, 294, 308, 331
Bsp19I	CCATGG	1 cut(s)	1032
BspACI	CCGC	6 cut(s)	61, 175, 314, 748, 986, 1184
BspANI	GGCC	5 cut(s)	49, 64, 670, 769, 1087
BspCNI	CTCAG	2 cut(s)	875, 1051
BspFNI	CGCG	1 cut(s)	988
BspLI	GGNNCC	2 cut(s)	237, 1263
BspMI	ACCTGC	2 cut(s)	66, 441
BspPI	GGATC	3 cut(s)	138, 316, 339
BsrDI	GCAATG	1 cut(s)	1051
BsrFI	RCCGGY	3 cut(s)	45, 49, 661
BsrI	ACTGG	3 cut(s)	18, 36, 257
BssAI	RCCGGY	3 cut(s)	45, 49, 661
BssECI	CCNNGG	3 cut(s)	272, 702, 1032
BssMI	GATC	6 cut(s)	89, 143, 244, 294, 308, 331
BssNAI	GTATAC	1 cut(s)	1069
BssT1I	CCWWGG	1 cut(s)	1032
Bst1107I	GTATAC	1 cut(s)	1069
Bst2UI	CCWGG	2 cut(s)	644, 704
Bst4CI	ACNGT	5 cut(s)	196, 469, 536, 733, 890
Bst6I	CTCTTC	3 cut(s)	227, 1070, 1157
BstBAI	YACGTR	1 cut(s)	617
BstC8I	GCNNGC	8 cut(s)	43, 47, 168, 403, 560, 633, 663, 1056
BstDEI	CTNAG	7 cut(s)	341, 741, 862, 1059, 1110, 1251, 1275
BstDSI	CCRYGG	2 cut(s)	272, 1032
BstF5I	GGATG	5 cut(s)	43, 162, 905, 964, 1027
BstFNI	CGCG	1 cut(s)	988
BstKTI	GATC	6 cut(s)	92, 146, 247, 297, 311, 334
BstMAI	GTCTC	2 cut(s)	1155, 1176
BstMBI	GATC	6 cut(s)	89, 143, 244, 294, 308, 331
BstMCI	CGRYCG	2 cut(s)	50, 54
BstMWI	GCNNNNNNNGC	4 cut(s)	172, 589, 667, 949
BstNI	CCWGG	2 cut(s)	644, 704
BstNSI	RCATGY	1 cut(s)	905
BstSCI	CCNGG	2 cut(s)	642, 702
BstSFI	CTRYAG	3 cut(s)	585, 609, 1266
BstSLI	GKGCMC	1 cut(s)	691
BstUI	CGCG	1 cut(s)	988
BstV1I	GCAGC	4 cut(s)	4, 323, 423, 579
BstX2I	RGATCY	1 cut(s)	143
BstXI	CCANNNNNNTGG	1 cut(s)	1033
BstYI	RGATCY	1 cut(s)	143
BstZ17I	GTATAC	1 cut(s)	1069
BstZI	CGGCCG	1 cut(s)	47
Bsu36I	CCTNAGG	1 cut(s)	341
BsuI	GTATCC	1 cut(s)	376
BsuRI	GGCC	5 cut(s)	49, 64, 670, 769, 1087
BtgI	CCRYGG	2 cut(s)	272, 1032
BtsCI	GGATG	5 cut(s)	43, 162, 905, 964, 1027
BtsI	GCAGTG	3 cut(s)	12, 361, 787
BtsIMutI	CAGTG	4 cut(s)	12, 361, 787, 1240
BveI	ACCTGC	2 cut(s)	66, 441
Cac8I	GCNNGC	8 cut(s)	43, 47, 168, 403, 560, 633, 663, 1056
CaiI	CAGNNNCTG	1 cut(s)	534
Cfr10I	RCCGGY	3 cut(s)	45, 49, 661
Cfr13I	GGNCC	4 cut(s)	235, 269, 430, 668
CseI	GACGC	1 cut(s)	932
CsiI	ACCWGGT	1 cut(s)	642
Csp6I	GTAC	2 cut(s)	100, 1095
CspCI	CAANNNNNGTGG	4 cut(s)	286, 321, 376, 411
CviAII	CATG	9 cut(s)	71, 171, 206, 551, 902, 914, 919, 1027, 1033
CviQI	GTAC	2 cut(s)	100, 1095
DdeI	CTNAG	7 cut(s)	341, 741, 862, 1059, 1110, 1251, 1275
DpnI	GATC	6 cut(s)	91, 145, 246, 296, 310, 333
DpnII	GATC	6 cut(s)	89, 143, 244, 294, 308, 331
EaeI	YGGCCR	1 cut(s)	47
EagI	CGGCCG	1 cut(s)	47
Eam1104I	CTCTTC	3 cut(s)	227, 1070, 1157
EarI	CTCTTC	3 cut(s)	227, 1070, 1157
Ecl136II	GAGCTC	1 cut(s)	795
EclXI	CGGCCG	1 cut(s)	47
Eco130I	CCWWGG	1 cut(s)	1032
Eco147I	AGGCCT	1 cut(s)	769
Eco24I	GRGCYC	2 cut(s)	292, 797
Eco47I	GGWCC	3 cut(s)	235, 269, 430
Eco52I	CGGCCG	1 cut(s)	47
Eco53kI	GAGCTC	1 cut(s)	795
Eco81I	CCTNAGG	1 cut(s)	341
EcoICRI	GAGCTC	1 cut(s)	795
EcoRI	GAATTC	1 cut(s)	497
EcoRII	CCWGG	2 cut(s)	642, 702
EcoT14I	CCWWGG	1 cut(s)	1032
EcoT22I	ATGCAT	2 cut(s)	907, 924
EcoT38I	GRGCYC	2 cut(s)	292, 797
ErhI	CCWWGG	1 cut(s)	1032
FaeI	CATG	9 cut(s)	74, 174, 209, 554, 905, 917, 922, 1030, 1036
FalI	AAGNNNNNCTT	2 cut(s)	131, 163
FaqI	GGGAC	2 cut(s)	42, 545
FatI	CATG	9 cut(s)	70, 170, 205, 550, 901, 913, 918, 1026, 1032
FblI	GTMKAC	2 cut(s)	54, 1068
Fnu4HI	GCNGC	7 cut(s)	18, 62, 176, 337, 437, 593, 986
FokI	GGATG	5 cut(s)	50, 169, 892, 971, 1034
FriOI	GRGCYC	2 cut(s)	292, 797
Fsp4HI	GCNGC	7 cut(s)	18, 62, 176, 337, 437, 593, 986
FspBI	CTAG	2 cut(s)	930, 1220
GluI	GCNGC	7 cut(s)	18, 62, 176, 337, 437, 593, 986
GsaI	CCCAGC	1 cut(s)	669
HaeIII	GGCC	5 cut(s)	49, 64, 670, 769, 1087
HapII	CCGG	4 cut(s)	46, 50, 317, 662
HgaI	GACGC	1 cut(s)	932
Hin1II	CATG	9 cut(s)	74, 174, 209, 554, 905, 917, 922, 1030, 1036
HincII	GTYRAC	1 cut(s)	55
HindII	GTYRAC	1 cut(s)	55
HinfI	GANTC	3 cut(s)	256, 408, 415
HpaII	CCGG	4 cut(s)	46, 50, 317, 662
HphI	GGTGA	5 cut(s)	86, 217, 303, 538, 1207
Hpy166II	GTNNAC	4 cut(s)	55, 539, 1069, 1215
Hpy188I	TCNGA	2 cut(s)	235, 765
Hpy188III	TCNNGA	3 cut(s)	412, 508, 570
Hpy8I	GTNNAC	4 cut(s)	55, 539, 1069, 1215
Hpy99I	CGWCG	5 cut(s)	90, 459, 765, 826, 948
HpyAV	CCTTC	5 cut(s)	71, 75, 780, 1057, 1252
HpyCH4III	ACNGT	5 cut(s)	196, 469, 536, 733, 890
HpyCH4IV	ACGT	6 cut(s)	85, 98, 442, 457, 616, 760
HpyF10VI	GCNNNNNNNGC	4 cut(s)	172, 589, 667, 949
HpyF3I	CTNAG	7 cut(s)	341, 741, 862, 1059, 1110, 1251, 1275
HpySE526I	ACGT	6 cut(s)	85, 98, 442, 457, 616, 760
Hsp92II	CATG	9 cut(s)	74, 174, 209, 554, 905, 917, 922, 1030, 1036
KroI	GCCGGC	2 cut(s)	45, 661
KroNI	GCCGGC	2 cut(s)	47, 663
Kzo9I	GATC	6 cut(s)	89, 143, 244, 294, 308, 331
LmnI	GCTCC	4 cut(s)	628, 792, 826, 881
Lsp1109I	GCAGC	4 cut(s)	4, 323, 423, 579
LweI	GCATC	6 cut(s)	28, 29, 388, 735, 914, 1012
MabI	ACCWGGT	1 cut(s)	642
MaeI	CTAG	2 cut(s)	930, 1220
MaeII	ACGT	6 cut(s)	85, 98, 442, 457, 616, 760
MaeIII	GTNAC	3 cut(s)	159, 248, 544
MalI	GATC	6 cut(s)	91, 145, 246, 296, 310, 333
MboI	GATC	6 cut(s)	89, 143, 244, 294, 308, 331
MboII	GAAGA	8 cut(s)	214, 251, 493, 496, 974, 1020, 1087, 1174
MflI	RGATCY	1 cut(s)	143
MhlI	GDGCHC	3 cut(s)	292, 691, 797
MluCI	AATT	5 cut(s)	497, 511, 597, 811, 1015
MmeI	TCCRAC	4 cut(s)	213, 408, 743, 985
MnlI	CCTC	6 cut(s)	339, 711, 759, 781, 1073, 1219
Mph1103I	ATGCAT	2 cut(s)	907, 924
MroNI	GCCGGC	2 cut(s)	45, 661
MseI	TTAA	1 cut(s)	735
MslI	CAYNNNNRTG	1 cut(s)	1031
MspA1I	CMGCKG	1 cut(s)	1058
MspI	CCGG	4 cut(s)	46, 50, 317, 662
MspR9I	CCNGG	2 cut(s)	644, 704
Mva1269I	GAATGC	2 cut(s)	922, 945
MvaI	CCWGG	2 cut(s)	644, 704
MvnI	CGCG	1 cut(s)	988
MwoI	GCNNNNNNNGC	4 cut(s)	172, 589, 667, 949
NaeI	GCCGGC	2 cut(s)	47, 663
NcoI	CCATGG	1 cut(s)	1032
NdeII	GATC	6 cut(s)	89, 143, 244, 294, 308, 331
NgoMIV	GCCGGC	2 cut(s)	45, 661
NlaIII	CATG	9 cut(s)	74, 174, 209, 554, 905, 917, 922, 1030, 1036
NlaIV	GGNNCC	2 cut(s)	237, 1263
NmuCI	GTSAC	1 cut(s)	544
NsiI	ATGCAT	2 cut(s)	907, 924
NspI	RCATGY	1 cut(s)	905
PceI	AGGCCT	1 cut(s)	769
PctI	GAATGC	2 cut(s)	922, 945
PdiI	GCCGGC	2 cut(s)	47, 663
PfeI	GAWTC	3 cut(s)	256, 408, 415
PkrI	GCNGC	7 cut(s)	19, 63, 177, 338, 438, 594, 987
Ppu21I	YACGTR	1 cut(s)	617
Psp124BI	GAGCTC	1 cut(s)	797
Psp6I	CCWGG	2 cut(s)	642, 702
PspFI	CCCAGC	1 cut(s)	665
PspGI	CCWGG	2 cut(s)	642, 702
PspN4I	GGNNCC	2 cut(s)	237, 1263
PspPI	GGNCC	4 cut(s)	235, 269, 430, 668
PstNI	CAGNNNCTG	1 cut(s)	534
PsuI	RGATCY	1 cut(s)	143
PvuII	CAGCTG	1 cut(s)	1058
RsaI	GTAC	2 cut(s)	101, 1096
RsaNI	GTAC	2 cut(s)	100, 1095
RseI	CAYNNNNRTG	1 cut(s)	1031
SacI	GAGCTC	1 cut(s)	797
SalI	GTCGAC	1 cut(s)	53
SaqAI	TTAA	1 cut(s)	735
SatI	GCNGC	7 cut(s)	18, 62, 176, 337, 437, 593, 986
Sau3AI	GATC	6 cut(s)	89, 143, 244, 294, 308, 331
Sau96I	GGNCC	4 cut(s)	235, 269, 430, 668
ScrFI	CCNGG	2 cut(s)	644, 704
SduI	GDGCHC	3 cut(s)	292, 691, 797
SexAI	ACCWGGT	1 cut(s)	642
SfaNI	GCATC	6 cut(s)	28, 29, 388, 735, 914, 1012
SfcI	CTRYAG	3 cut(s)	585, 609, 1266
SinI	GGWCC	3 cut(s)	235, 269, 430
SmiMI	CAYNNNNRTG	1 cut(s)	1031
SmlI	CTYRAG	1 cut(s)	1118
SmoI	CTYRAG	1 cut(s)	1118
Sse9I	AATT	5 cut(s)	497, 511, 597, 811, 1015
SseBI	AGGCCT	1 cut(s)	769
SsiI	CCGC	6 cut(s)	61, 175, 314, 748, 986, 1184
SspMI	CTAG	2 cut(s)	930, 1220
SstI	GAGCTC	1 cut(s)	797
StuI	AGGCCT	1 cut(s)	769
StyD4I	CCNGG	2 cut(s)	642, 702
StyI	CCWWGG	1 cut(s)	1032
TaaI	ACNGT	5 cut(s)	196, 469, 536, 733, 890
TaiI	ACGT	6 cut(s)	88, 101, 445, 460, 619, 763
TaqI	TCGA	6 cut(s)	54, 88, 187, 454, 507, 893
TasI	AATT	5 cut(s)	497, 511, 597, 811, 1015
TauI	GCSGC	3 cut(s)	64, 178, 988
TfiI	GAWTC	3 cut(s)	256, 408, 415
Tru1I	TTAA	1 cut(s)	735
Tru9I	TTAA	1 cut(s)	735
TscAI	CASTG	4 cut(s)	12, 361, 787, 1240
TseFI	GTSAC	1 cut(s)	544
TseI	GCWGC	4 cut(s)	17, 336, 436, 592
Tsp45I	GTSAC	1 cut(s)	544
TspDTI	ATGAA	1 cut(s)	975
TspGWI	ACGGA	2 cut(s)	261, 839
TspRI	CASTG	4 cut(s)	12, 361, 787, 1240
VpaK11BI	GGWCC	3 cut(s)	235, 269, 430
XapI	RAATTY	3 cut(s)	497, 511, 811
XceI	RCATGY	1 cut(s)	905
XmiI	GTMKAC	2 cut(s)	54, 1068
XspI	CTAG	2 cut(s)	930, 1220
Zsp2I	ATGCAT	2 cut(s)	907, 924

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.