Rorug06G0239600

Belongs to the complex I LYR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0011003
Physical Location & Seq
Reverse (-)
38213279 .. 38216595
3317 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0239600.1

Sequence Viewer

Length: 1593 bp
ATGGAGGAAATAACCGCCGCTCCGATTACACCCCGGCCGGTCACCACCGATGCTACTCCGGCAACCACCGCTGCTCCTCAGAGCTCAGAGCCGAAGATGTCCAAGGCGGCGTCCGTGTCCCGGGAACCGCTCGTGATTCCGCCACGCGGTGGAGTTGACCAGATAGAGATAAAGGCCAAAACCCCAAAATCCTTAACTCCGAGATCCCGTACTCCACGCTTCATGACTCCTATAGGGAGCCCCGTTAGGAGGGCTCTTCAGCTCACGAGGCTTGACCCCGAAGACGCCTGGCTTCCCATCACCGAGTCTAGAAATGGTAACGCTTACTATGCCGCCTTCCACACTCTTTGCTCCGGCATTGGGATTCAGGCCCTCGTGATCCCTGTCGCCTTCACCATTCTTGGGTGGACATGGGGGATTATATGCATGACGTTAGCGTTCTTATGGCAACTTTACACTCTGTTCCTGCTCGTGCAGCTTCATGAATCTTCTGAAACAGGCCTTCGCTATTGCAGATACATTCAACTTTGCAACGCATGTTTTGGTGAGAAGCTATCGAAGTTCTTAGCCCTGTTCCCAATTCTCTACCTCTCCGGCGGAACTTGCGTGGCGTTAATCGTCCTCGGAGGAGCAACATGCAAGATGTTCTTCCAAATCGTGTGCGGTCAAACATGCACCATCAAGACCTTAACACCCGCAGAGTGGTACTTGGTCTTTACATGCGCGGCAGTGATCCTGTCTCAGCTTCCCAACTTGAACTCCATCGCCGGAGTGTCTCTTGTTGGTGCCATCACTGCTATCGGCTATTGTACGCTCATTTGGGTTGTGTCTGTTGACAAGGGTAGACTACCTCATGTGTCCTACAATCCCCTGAAGGCCGACAAACAATTCATACAATTCTTCGATGTTCTGAATGCTCTTGGAATGATTGCTTTTGGCTTCAGAGGCCACAACCTTATCCTTGAGATCCAGGCTACAATGCCCTCTAGTGAAAAACACCCATCACGCGTGCCTATGTGGAGAGGTGTACGGTTTTCATACACACTTATAGCATTGTGCATCTTCCCTCTCGCAATTGGAGGTTATTGGGCATATGGTCAAAAGATACCGGAACAAGGGGGTATGTTTGCAGCCTTGTTCACCTTCCATTCGACTGACACCTCCCAATTCGTCCTAGGGCTAGCAAGTTTGTTTGTGATAGTCAATGCACTGAGCTCCTTCCAAATCTACGGCATGCCCATGTTCGACGAAATGGAGTCCCATTACACTAGGAGGTTCAAGAAGGCTGCTCCATGGTGGCTCAGGGCTATTATGCGAGCTATGTTTACTTACGGCTGCTACTTCGTAGCCGTGGCCATCCCCTTCTTGGGAAGCTTGGCTGGACTGATAGGAGGGATTGCATTGCCGGTGACTTTGGCTTATCCATGTTTCATGTGGCTCAAGATGAAGAAGCCAAAGAAGTACACTCCAAGCTGGTGGATCAATTGGGTACTTGGGGTTGTGGGTATGTGTTTAAGCGTGCTTTTGATTGTGTCTGGTACTTATGTCGTAATTGATACTGGTATTAAGGTGAGCTTCTTCAAACCAACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Complex1_LYR

Protein Analysis

530

Amino Acids

58.56

Weight (kDa)

9.3

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 105 - 518 7.5e-63 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011003)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62810 AT3G62810
fragaria_vesca FvH4_2g25692 FvH4_3g17380
malus_domestica MD03G1287900.v1.1 MD11G1310400.v1.1
prunus_persica Prupe.8G261100_v2.0.a1
pyrus_communis pycom16g13370
rosa_chinensis RchiOBHm_Chr6g0293971
rosa_laevigata RLG00000011911
rosa_multiflora Rmu_sc0005126.1_g000008 Rmu_sc0005647.1_g000004
rosa_roxburghii Rroxscaffold_7G00173780
rosa_rugosa Rorug05G0037400 Rorug06G0239600
rosa_samantha Rh6AG352700 Rh6BG359700 Rh6CG367000 Rh6DG353400
rosa_wichuraiana Rw6G030730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 785
AccB7I CCANNNNNTGG 1 cut(s) 149
AccBSI CCGCTC 2 cut(s) 20, 130
AccI GTMKAC 1 cut(s) 844
AccII CGCG 3 cut(s) 147, 725, 1008
AclWI GGATC 5 cut(s) 198, 373, 727, 961, 1487
AcoI YGGCCR 2 cut(s) 35, 1353
AcuI CTGAAG 3 cut(s) 242, 893, 925
AcyI GRCGYC 2 cut(s) 110, 285
AdeI CACNNNGTG 1 cut(s) 149
AfaI GTAC 7 cut(s) 211, 707, 811, 1029, 1463, 1491, 1540
AflIII ACRYGT 1 cut(s) 1006
AgsI TTSAA 4 cut(s) 524, 757, 1279, 1582
AjnI CCWGG 2 cut(s) 287, 969
Alw21I GWGCWC 2 cut(s) 86, 1217
Alw26I GTCTC 2 cut(s) 744, 780
AlwI GGATC 5 cut(s) 198, 373, 727, 961, 1487
Ama87I CYCGRG 1 cut(s) 120
AoxI GGCC 7 cut(s) 35, 174, 369, 499, 876, 946, 1353
ApeKI GCWGC 5 cut(s) 71, 475, 1130, 1286, 1335
AspA2I CCTAGG 1 cut(s) 1174
AspLEI GCGC 1 cut(s) 725
AspS9I GGNCC 1 cut(s) 370
AsuC2I CCSGG 3 cut(s) 34, 121, 122
AsuHPI GGTGA 7 cut(s) 34, 292, 385, 557, 1132, 1420, 1582
AsuNHI GCTAGC 1 cut(s) 1180
AvaI CYCGRG 1 cut(s) 120
AvrII CCTAGG 1 cut(s) 1174
BaeI ACNNNNGTAYC 2 cut(s) 1530, 1563
BalI TGGCCA 1 cut(s) 1355
BanI GGYRCC 1 cut(s) 785
BanII GRGCYC 4 cut(s) 86, 242, 256, 1217
BauI CACGAG 4 cut(s) 131, 265, 374, 470
BbsI GAAGAC 1 cut(s) 288
Bbv12I GWGCWC 2 cut(s) 86, 1217
BbvI GCAGC 5 cut(s) 58, 487, 1142, 1273, 1322
BccI CCATC 6 cut(s) 305, 686, 770, 797, 1009, 1364
BceAI ACGGC 3 cut(s) 1246, 1334, 1348
BciT130I CCWGG 2 cut(s) 289, 971
BcnI CCSGG 3 cut(s) 34, 121, 122
BcoDI GTCTC 2 cut(s) 744, 780
BfaI CTAG 5 cut(s) 309, 987, 1175, 1181, 1269
BfmI CTRYAG 1 cut(s) 231
BisI GCNGC 9 cut(s) 18, 72, 108, 333, 476, 726, 1131, 1287, 1336
BlnI CCTAGG 1 cut(s) 1174
BlsI GCNGC 9 cut(s) 19, 73, 109, 334, 477, 727, 1132, 1288, 1337
Bme1390I CCNGG 5 cut(s) 34, 121, 122, 289, 971
BmeT110I CYCGRG 1 cut(s) 120
BmgT120I GGNCC 1 cut(s) 370
BmiI GGNNCC 3 cut(s) 126, 239, 787
BmrFI CCNGG 5 cut(s) 34, 121, 122, 289, 971
BmsI GCATC 2 cut(s) 40, 1068
BmtI GCTAGC 1 cut(s) 1184
BpiI GAAGAC 1 cut(s) 288
Bpu10I CCTNAGC 1 cut(s) 1301
BpuEI CTTGAG 2 cut(s) 983, 1424
BpuMI CCSGG 3 cut(s) 34, 121, 122
BsaHI GRCGYC 2 cut(s) 110, 285
BsaJI CCNNGG 7 cut(s) 32, 102, 120, 622, 1174, 1292, 1350
BsaWI WCCGGW 1 cut(s) 1108
BsaXI ACNNNNNCTCC 5 cut(s) 34, 58, 88, 743, 773
Bse118I RCCGGY 2 cut(s) 37, 1405
Bse1I ACTGG 1 cut(s) 1564
Bse3DI GCAATG 1 cut(s) 1400
BseBI CCWGG 2 cut(s) 289, 971
BseDI CCNNGG 7 cut(s) 32, 102, 120, 622, 1174, 1292, 1350
BseGI GGATG 1 cut(s) 1356
BseMI GCAATG 1 cut(s) 1400
BseMII CTCAG 5 cut(s) 92, 99, 755, 1202, 1315
BseNI ACTGG 1 cut(s) 1564
BseRI GAGGAG 2 cut(s) 66, 642
BseX3I CGGCCG 1 cut(s) 35
BseXI GCAGC 5 cut(s) 58, 487, 1142, 1273, 1322
BsgI GTGCAG 1 cut(s) 494
Bsh1236I CGCG 3 cut(s) 147, 725, 1008
Bsh1285I CGRYCG 1 cut(s) 38
BshFI GGCC 7 cut(s) 37, 176, 371, 501, 878, 948, 1355
BshNI GGYRCC 1 cut(s) 785
BsiEI CGRYCG 1 cut(s) 38
BsiHKAI GWGCWC 2 cut(s) 86, 1217
BsiHKCI CYCGRG 1 cut(s) 120
BsiSI CCGG 9 cut(s) 34, 38, 59, 121, 354, 594, 768, 1109, 1406
BslFI GGGAC 2 cut(s) 103, 1243
BsmAI GTCTC 2 cut(s) 744, 780
BsmFI GGGAC 2 cut(s) 103, 1243
BsmI GAATGC 1 cut(s) 919
BsnI GGCC 7 cut(s) 37, 176, 371, 501, 878, 948, 1355
BsoBI CYCGRG 1 cut(s) 120
Bsp1286I GDGCHC 4 cut(s) 86, 242, 256, 1217
Bsp143I GATC 5 cut(s) 203, 378, 732, 966, 1479
Bsp19I CCATGG 1 cut(s) 1292
BspANI GGCC 7 cut(s) 37, 176, 371, 501, 878, 948, 1355
BspCNI CTCAG 5 cut(s) 91, 98, 754, 1203, 1314
BspFNI CGCG 3 cut(s) 147, 725, 1008
BspHI TCATGA 2 cut(s) 222, 481
BspLI GGNNCC 3 cut(s) 126, 239, 787
BspOI GCTAGC 1 cut(s) 1184
BspPI GGATC 5 cut(s) 198, 373, 727, 961, 1487
BspQI GCTCTTC 1 cut(s) 261
BspT107I GGYRCC 1 cut(s) 785
BsrBI CCGCTC 2 cut(s) 20, 130
BsrDI GCAATG 1 cut(s) 1400
BsrFI RCCGGY 2 cut(s) 37, 1405
BsrI ACTGG 1 cut(s) 1564
BssAI RCCGGY 2 cut(s) 37, 1405
BssECI CCNNGG 7 cut(s) 32, 102, 120, 622, 1174, 1292, 1350
BssMI GATC 5 cut(s) 203, 378, 732, 966, 1479
BssNI GRCGYC 2 cut(s) 110, 285
BssSI CACGAG 4 cut(s) 131, 265, 374, 470
BssT1I CCWWGG 3 cut(s) 102, 1174, 1292
Bst2BI CACGAG 4 cut(s) 131, 265, 374, 470
Bst2UI CCWGG 2 cut(s) 289, 971
Bst4CI ACNGT 1 cut(s) 1032
Bst6I CTCTTC 1 cut(s) 261
BstACI GRCGYC 2 cut(s) 110, 285
BstC8I GCNNGC 5 cut(s) 1010, 1182, 1235, 1317, 1520
BstDEI CTNAG 6 cut(s) 78, 85, 565, 741, 1211, 1301
BstDSI CCRYGG 2 cut(s) 1292, 1350
BstEII GGTNACC 1 cut(s) 40
BstF5I GGATG 1 cut(s) 1356
BstFNI CGCG 3 cut(s) 147, 725, 1008
BstHHI GCGC 1 cut(s) 725
BstKTI GATC 5 cut(s) 206, 381, 735, 969, 1482
BstMAI GTCTC 2 cut(s) 744, 780
BstMBI GATC 5 cut(s) 203, 378, 732, 966, 1479
BstMCI CGRYCG 1 cut(s) 38
BstMWI GCNNNNNNNGC 8 cut(s) 59, 68, 268, 329, 475, 603, 794, 945
BstNI CCWGG 2 cut(s) 289, 971
BstNSI RCATGY 5 cut(s) 540, 639, 675, 723, 1237
BstPI GGTNACC 1 cut(s) 40
BstSCI CCNGG 5 cut(s) 32, 119, 120, 287, 969
BstSFI CTRYAG 1 cut(s) 231
BstUI CGCG 3 cut(s) 147, 725, 1008
BstV1I GCAGC 5 cut(s) 58, 487, 1142, 1273, 1322
BstV2I GAAGAC 1 cut(s) 288
BstX2I RGATCY 2 cut(s) 203, 966
BstXI CCANNNNNNTGG 1 cut(s) 1476
BstYI RGATCY 2 cut(s) 203, 966
BstZI CGGCCG 1 cut(s) 35
BsuRI GGCC 7 cut(s) 37, 176, 371, 501, 878, 948, 1355
BtgI CCRYGG 2 cut(s) 1292, 1350
BtgZI GCGATG 1 cut(s) 748
BtsCI GGATG 1 cut(s) 1356
BtsI GCAGTG 2 cut(s) 735, 792
BtsIMutI CAGTG 3 cut(s) 735, 792, 1208
Cac8I GCNNGC 5 cut(s) 1010, 1182, 1235, 1317, 1520
CciI TCATGA 2 cut(s) 222, 481
CfoI GCGC 1 cut(s) 725
Cfr10I RCCGGY 2 cut(s) 37, 1405
Cfr13I GGNCC 1 cut(s) 370
Cfr9I CCCGGG 1 cut(s) 120
CseI GACGC 2 cut(s) 99, 293
Csp6I GTAC 7 cut(s) 210, 706, 810, 1028, 1462, 1490, 1539
CspCI CAANNNNNGTGG 2 cut(s) 329, 364
CviQI GTAC 7 cut(s) 210, 706, 810, 1028, 1462, 1490, 1539
DdeI CTNAG 6 cut(s) 78, 85, 565, 741, 1211, 1301
DpnI GATC 5 cut(s) 205, 380, 734, 968, 1481
DpnII GATC 5 cut(s) 203, 378, 732, 966, 1479
DraIII CACNNNGTG 1 cut(s) 149
EaeI YGGCCR 2 cut(s) 35, 1353
EagI CGGCCG 1 cut(s) 35
Eam1104I CTCTTC 1 cut(s) 261
EarI CTCTTC 1 cut(s) 261
EciI GGCGGA 2 cut(s) 129, 612
Ecl136II GAGCTC 2 cut(s) 84, 1215
EclXI CGGCCG 1 cut(s) 35
Eco130I CCWWGG 3 cut(s) 102, 1174, 1292
Eco147I AGGCCT 1 cut(s) 501
Eco24I GRGCYC 4 cut(s) 86, 242, 256, 1217
Eco52I CGGCCG 1 cut(s) 35
Eco53kI GAGCTC 2 cut(s) 84, 1215
Eco57I CTGAAG 3 cut(s) 242, 893, 925
Eco88I CYCGRG 1 cut(s) 120
Eco91I GGTNACC 1 cut(s) 40
EcoICRI GAGCTC 2 cut(s) 84, 1215
EcoO109I RGGNCCY 1 cut(s) 370
EcoO65I GGTNACC 1 cut(s) 40
EcoRII CCWGG 2 cut(s) 287, 969
EcoT14I CCWWGG 3 cut(s) 102, 1174, 1292
EcoT22I ATGCAT 1 cut(s) 428
EcoT38I GRGCYC 4 cut(s) 86, 242, 256, 1217
ErhI CCWWGG 3 cut(s) 102, 1174, 1292
FalI AAGNNNNNCTT 4 cut(s) 632, 664, 1559, 1591
FaqI GGGAC 2 cut(s) 103, 1243
FauI CCCGC 1 cut(s) 703
FauNDI CATATG 1 cut(s) 1093
FblI GTMKAC 1 cut(s) 844
Fnu4HI GCNGC 9 cut(s) 18, 72, 108, 333, 476, 726, 1131, 1287, 1336
FokI GGATG 1 cut(s) 1343
FriOI GRGCYC 4 cut(s) 86, 242, 256, 1217
Fsp4HI GCNGC 9 cut(s) 18, 72, 108, 333, 476, 726, 1131, 1287, 1336
FspBI CTAG 5 cut(s) 309, 987, 1175, 1181, 1269
GlaI GCGC 1 cut(s) 724
GluI GCNGC 9 cut(s) 18, 72, 108, 333, 476, 726, 1131, 1287, 1336
HaeIII GGCC 7 cut(s) 37, 176, 371, 501, 878, 948, 1355
HapII CCGG 9 cut(s) 34, 38, 59, 121, 354, 594, 768, 1109, 1406
HgaI GACGC 2 cut(s) 99, 293
HhaI GCGC 1 cut(s) 725
Hin1I GRCGYC 2 cut(s) 110, 285
Hin6I GCGC 1 cut(s) 723
HinP1I GCGC 1 cut(s) 723
HincII GTYRAC 2 cut(s) 157, 835
HindII GTYRAC 2 cut(s) 157, 835
HindIII AAGCTT 1 cut(s) 1372
HinfI GANTC 6 cut(s) 136, 226, 305, 364, 485, 1256
HpaII CCGG 9 cut(s) 34, 38, 59, 121, 354, 594, 768, 1109, 1406
HphI GGTGA 7 cut(s) 34, 292, 385, 557, 1132, 1420, 1582
Hpy166II GTNNAC 8 cut(s) 157, 408, 835, 845, 1028, 1140, 1326, 1464
Hpy188I TCNGA 8 cut(s) 24, 81, 88, 201, 493, 626, 912, 944
Hpy188III TCNNGA 9 cut(s) 133, 223, 265, 309, 376, 482, 682, 1279, 1441
Hpy8I GTNNAC 8 cut(s) 157, 408, 835, 845, 1028, 1140, 1326, 1464
Hpy99I CGWCG 1 cut(s) 1250
HpyAV CCTTC 8 cut(s) 346, 400, 512, 868, 1153, 1228, 1276, 1372
HpyCH4III ACNGT 1 cut(s) 1032
HpyCH4IV ACGT 2 cut(s) 431, 1589
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 68, 268, 329, 475, 603, 794, 945
HpyF3I CTNAG 6 cut(s) 78, 85, 565, 741, 1211, 1301
HpySE526I ACGT 2 cut(s) 431, 1589
Hsp92I GRCGYC 2 cut(s) 110, 285
HspAI GCGC 1 cut(s) 723
Kzo9I GATC 5 cut(s) 203, 378, 732, 966, 1479
LguI GCTCTTC 1 cut(s) 261
LmnI GCTCC 7 cut(s) 25, 79, 237, 356, 629, 1220, 1294
Lsp1109I GCAGC 5 cut(s) 58, 487, 1142, 1273, 1322
LweI GCATC 2 cut(s) 40, 1068
MaeI CTAG 5 cut(s) 309, 987, 1175, 1181, 1269
MaeII ACGT 2 cut(s) 431, 1589
MaeIII GTNAC 3 cut(s) 40, 317, 1408
MalI GATC 5 cut(s) 205, 380, 734, 968, 1481
MbiI CCGCTC 2 cut(s) 20, 130
MboI GATC 5 cut(s) 203, 378, 732, 966, 1479
MboII GAAGA 9 cut(s) 106, 248, 293, 480, 640, 892, 1054, 1459, 1570
MfeI CAATTG 2 cut(s) 1074, 1483
MflI RGATCY 2 cut(s) 203, 966
MhlI GDGCHC 4 cut(s) 86, 242, 256, 1217
MlsI TGGCCA 1 cut(s) 1355
MluCI AATT 7 cut(s) 579, 887, 896, 1074, 1166, 1483, 1551
MluI ACGCGT 1 cut(s) 1006
MluNI TGGCCA 1 cut(s) 1355
MlyI GAGTC 3 cut(s) 220, 314, 1265
Mox20I TGGCCA 1 cut(s) 1355
Mph1103I ATGCAT 1 cut(s) 428
MscI TGGCCA 1 cut(s) 1355
MseI TTAA 5 cut(s) 194, 614, 689, 1514, 1566
MslI CAYNNNNRTG 1 cut(s) 1238
Msp20I TGGCCA 1 cut(s) 1355
MspA1I CMGCKG 1 cut(s) 71
MspI CCGG 9 cut(s) 34, 38, 59, 121, 354, 594, 768, 1109, 1406
MspR9I CCNGG 5 cut(s) 34, 121, 122, 289, 971
MunI CAATTG 2 cut(s) 1074, 1483
Mva1269I GAATGC 1 cut(s) 919
MvaI CCWGG 2 cut(s) 289, 971
MvnI CGCG 3 cut(s) 147, 725, 1008
MwoI GCNNNNNNNGC 8 cut(s) 59, 68, 268, 329, 475, 603, 794, 945
NciI CCSGG 3 cut(s) 34, 121, 122
NcoI CCATGG 1 cut(s) 1292
NdeI CATATG 1 cut(s) 1093
NdeII GATC 5 cut(s) 203, 378, 732, 966, 1479
NheI GCTAGC 1 cut(s) 1180
NlaIV GGNNCC 3 cut(s) 126, 239, 787
NmuCI GTSAC 2 cut(s) 40, 1408
NsiI ATGCAT 1 cut(s) 428
NspI RCATGY 5 cut(s) 540, 639, 675, 723, 1237
PaeI GCATGC 1 cut(s) 1237
PagI TCATGA 2 cut(s) 222, 481
PceI AGGCCT 1 cut(s) 501
PciSI GCTCTTC 1 cut(s) 261
PctI GAATGC 1 cut(s) 919
PfeI GAWTC 3 cut(s) 136, 364, 485
PflMI CCANNNNNTGG 1 cut(s) 149
PkrI GCNGC 9 cut(s) 19, 73, 109, 334, 477, 727, 1132, 1288, 1337
PleI GAGTC 3 cut(s) 220, 313, 1264
PpsI GAGTC 3 cut(s) 220, 313, 1264
Psp124BI GAGCTC 2 cut(s) 86, 1217
Psp6I CCWGG 2 cut(s) 287, 969
PspEI GGTNACC 1 cut(s) 40
PspGI CCWGG 2 cut(s) 287, 969
PspN4I GGNNCC 3 cut(s) 126, 239, 787
PspPI GGNCC 1 cut(s) 370
PsuI RGATCY 2 cut(s) 203, 966
RsaI GTAC 7 cut(s) 211, 707, 811, 1029, 1463, 1491, 1540
RsaNI GTAC 7 cut(s) 210, 706, 810, 1028, 1462, 1490, 1539
RseI CAYNNNNRTG 1 cut(s) 1238
SacI GAGCTC 2 cut(s) 86, 1217
SapI GCTCTTC 1 cut(s) 261
SaqAI TTAA 5 cut(s) 194, 614, 689, 1514, 1566
SatI GCNGC 9 cut(s) 18, 72, 108, 333, 476, 726, 1131, 1287, 1336
Sau3AI GATC 5 cut(s) 203, 378, 732, 966, 1479
Sau96I GGNCC 1 cut(s) 370
SchI GAGTC 3 cut(s) 220, 314, 1265
ScrFI CCNGG 5 cut(s) 34, 121, 122, 289, 971
SduI GDGCHC 4 cut(s) 86, 242, 256, 1217
SfaNI GCATC 2 cut(s) 40, 1068
SfcI CTRYAG 1 cut(s) 231
SmaI CCCGGG 1 cut(s) 122
SmiMI CAYNNNNRTG 1 cut(s) 1238
SmlI CTYRAG 2 cut(s) 962, 1439
SmoI CTYRAG 2 cut(s) 962, 1439
SphI GCATGC 1 cut(s) 1237
Sse9I AATT 7 cut(s) 579, 887, 896, 1074, 1166, 1483, 1551
SseBI AGGCCT 1 cut(s) 501
SspMI CTAG 5 cut(s) 309, 987, 1175, 1181, 1269
SstI GAGCTC 2 cut(s) 86, 1217
StuI AGGCCT 1 cut(s) 501
StyD4I CCNGG 5 cut(s) 32, 119, 120, 287, 969
StyI CCWWGG 3 cut(s) 102, 1174, 1292
TaaI ACNGT 1 cut(s) 1032
TaiI ACGT 2 cut(s) 434, 1592
TaqI TCGA 4 cut(s) 557, 903, 1151, 1245
TasI AATT 7 cut(s) 579, 887, 896, 1074, 1166, 1483, 1551
TatI WGTACW 1 cut(s) 1461
TauI GCSGC 4 cut(s) 20, 110, 335, 728
TfiI GAWTC 3 cut(s) 136, 364, 485
Tru1I TTAA 5 cut(s) 194, 614, 689, 1514, 1566
Tru9I TTAA 5 cut(s) 194, 614, 689, 1514, 1566
TscAI CASTG 3 cut(s) 735, 799, 1215
TseFI GTSAC 2 cut(s) 40, 1408
TseI GCWGC 5 cut(s) 71, 475, 1130, 1286, 1335
Tsp45I GTSAC 2 cut(s) 40, 1408
TspDTI ATGAA 7 cut(s) 211, 470, 498, 880, 1026, 1420, 1460
TspGWI ACGGA 1 cut(s) 103
TspMI CCCGGG 1 cut(s) 120
TspRI CASTG 3 cut(s) 735, 799, 1215
Van91I CCANNNNNTGG 1 cut(s) 149
XbaI TCTAGA 1 cut(s) 308
XceI RCATGY 5 cut(s) 540, 639, 675, 723, 1237
XcmI CCANNNNNNNNNTGG 2 cut(s) 1363, 1431
XmaI CCCGGG 1 cut(s) 120
XmaJI CCTAGG 1 cut(s) 1174
XmiI GTMKAC 1 cut(s) 844
XspI CTAG 5 cut(s) 309, 987, 1175, 1181, 1269
Zsp2I ATGCAT 1 cut(s) 428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.