Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0012491

Physical Location & Seq

Genomic Coordinates Reverse (-)

40142811 .. 40147318

Gene Structure 4508 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0255100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGGCGGTCTCCACTGTAAATGGCGGTTCCCCAACACCCGCTTTAACCGTCACTTGTGTCGTCTACCCTCCTCTCCTCCATTTCCACCATTCTCAACAAACACTTCACTACTATTCTCTCCGTTATCACAACCCAAAATCACCACTAACGACAGAACAACCGGTGTTGGGTACACAATCACAAACAGTACTAGAAGTAGAGTTGTCAGTCTCAGACCTCTGTTCTGTCTCCCTCAAAATCAACAAACCCAACAAGTACAAGAAGACAACGAACCAAACAATGAAGAAGAAGAAGAAGAAGAAGATGAGGACATTTCCCAAGGCCATGGCAATGGGAACTGGAGAATAGTACTTTCATCCAGCTTGGTTGGTCTCCTCACCGGCCTCGGTGTCGTTCTCTTCAACTACTCAGTGCATGAGATAAGAGAGGTGTTTTGGGATGGGATACCTCAAAGAGGAGCTTCATGGCTGAGAGAGGAGCCCATTACAGATATGTGGCAGCGAGTGATTCTGGTTCCGGCTTCCGGGGGTTTGATTGTGGCCATTTTGAATGTGCTTAGAGGTGCATTGGATGATGAACAAGGAGAAGAAAATGAAGAAGAAGAGAATGTATTGGTGAAAATGGGAATGCCCGTTTCGGTTTTTGATAGCTTGAAGGCTGCGTCACGTCCATTTCTTAAGGCTGTTGCTGCTTGTGTCACTCTGGGAACTGGGAATTCTTTAGGTCCGGAAGGGCCTAGTGTTGAGATTGGGACTTCCATTGCCAAAGGTGTAGGTGCTGTGTTTGATAGAAGTTCGCAGAGAAAGCTCTCTCTTGTGGCTGCTGGATCAGCTGCTGGAATTGCTTCTGGATTCAATGCTGCTGTTTCGGGATGCTTCTTTGCGGTAGAGTCTGTCCTATGGCCATCACCAGCGGATTTTTCTTCTTCTTCTGTTTCGCTTACAAATACCACTTCTATGGTCATTCTCAGTGCAGTGATAGCTTCTGTTGTTACACAAGTTGGTCTTGGTTCTGAACCAGCATTCAAGGTCCCAGGCTATGACTTCCGCTCACCTAGTGAGCTACCGCTGTATCTACTTCTGGGAGTTTTATGTGGCTTGGTTTCGTTAACCTTTTCCAAGTGCACATCATACATGTTGTTATTCGTTGACAATCTTCAGAAGGCCACTGCCGTGCCAAGAAGTTTGTTTCCTATACTAGGAGGCTTAGCAGTCGGGCTTATAGCATTGGCATATCCTGAAATCCTTTATTGGGGATTTGAGAATGTTGACATTTTGCTAGAATCTCGACCATTTGTGAAAGGCCTCTCAGCTGATCTCTTGGTTCAGCTGGTGGTGGTTAAGATAGGTGCAACCTCTTTGTGCCGCGCCTCTGGGTTAGTTGGAGGCTACTATGCTCCATCACTCTTCATTGGTGCAGCAACAGGAATGGCATATGGGAAATTCATTGGCTCCGCAGTTGCTCAGTCCAATCCCATACTTCACCTCTCCTACTTGGAAGTAGCATCACCACAAGCATATGGACTGGTTGGAATGGCTGCTACTCTTGCAGGAGTGTGCCAGGTACCTCTTACAGCAGTGCTGCTGCTTTTTGAATTGACACAAGATTATCGAATTGTTCTACCACTGCTTGGAGCTGTAGGGTTATCTTCATGGGTTACATCTGGACAGACAAGAAGAAAAGATGTCTCAAAGAGTAAAACACTCTTACAGGGAAAAACTAGTAGCATTCAACAACCTGAAGTACGTTTTCCTAGTGATAGCCCACTCACTTCTAGAAAAGCCTTCACTGAAAGCGCATCTAACATGAGTGACCTTTGTGAAATGGAAAGCTCACTCTGCATAGATGATTTTGATATTGATACGGAAAAGTTAGAAAAGAGAATACTCGTCTCAGAAGCCATGAGAACAAGATACGTGACTGTTTTGATGAACACTTTGCTTACAGAAGCAGTGGCTCTAATGCTTGCAGAAAAGCAGCCCTGTGCCATGATTGTTGATAGTGATCAGATTCTAATTGGTTTACTGACACTGGAAGACATTCAAAAGTTCAGCAATAAATATGCAAAATCAAGAAGACAACAACCCAAGGAACTTATAGTATGTGAAATGTGTTCTTCTGATGGGGAAGCATGCAAAGTGCCATGGACTGCTACACCCAGTATGGATCTATTTTCTGCTCAAAATATCATGAATAGATACGAAGTGAATCAAATTCCAGTTGTTACAGAGCATTCTCAGGATCAGAGAGGGCACCTAGTTGGCCTTTTAGACAGAGAGTGTATAAGCCTAACTTGCAGAGCTCTAGCAACCAGAGAATCCCTTTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031461 GO:0031463 GO:0031625 GO:0032991 GO:0043161 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0051171 GO:0051246 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04340 ko04341 map04340 map04341

Pfam Domains

Protein Families

BTB

Protein Analysis

776

Amino Acids

84.03

Weight (kDa)

5.16

Isoelectric Point (pI)

47.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Voltage_CLC	PF00654	224 - 554	2.5e-72	Voltage gated chloride channel
CBS	PF00571	631 - 684	2.6e-06	CBS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012491)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21780 AT1G21780
fragaria_vesca	FvH4_2g27041 FvH4_2g27041 FvH4_2g27041
malus_domestica	MD08G1162000.v1.1
prunus_persica	Prupe.1G495000_v2.0.a1 Prupe.1G495100_v2.0.a1
pyrus_communis	pycom08g14000
rosa_chinensis	RchiOBHm_Chr6g0295921
rosa_laevigata	RLG00000011756
rosa_multiflora	Rmu_sc0003139.1_g000009
rosa_roxburghii	Rroxscaffold_7G00172050
rosa_rugosa	Rorug06G0255100
rosa_samantha	Rh6AG368900 Rh6BG376600 Rh6CG382800 Rh6DG369400
rosa_wichuraiana	Rw6G032170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1564
AccB1I	GGYRCC	2 cut(s)	1564, 2253
AccB7I	CCANNNNNTGG	1 cut(s)	1631
AccBSI	CCGCTC	1 cut(s)	1050
AccI	GTMKAC	1 cut(s)	64
AccII	CGCG	1 cut(s)	1368
AccIII	TCCGGA	1 cut(s)	727
AciI	CCGC	9 cut(s)	6, 25, 40, 884, 914, 1048, 1067, 1366, 1455
AclWI	GGATC	3 cut(s)	835, 2175, 2250
AcoI	YGGCCR	2 cut(s)	540, 902
AcsI	RAATTY	3 cut(s)	715, 1442, 2214
AcuI	CTGAAG	2 cut(s)	1142, 1761
AdeI	CACNNNGTG	1 cut(s)	1058
AfaI	GTAC	6 cut(s)	173, 190, 258, 351, 1566, 1746
AfiI	CCNNNNNNNGG	6 cut(s)	168, 455, 524, 1199, 1252, 1631
AflII	CTTAAG	1 cut(s)	677
AflIII	ACRYGT	1 cut(s)	1134
AgeI	ACCGGT	1 cut(s)	161
AgsI	TTSAA	8 cut(s)	403, 550, 655, 856, 1027, 1595, 1733, 2045
AhlI	ACTAGT	1 cut(s)	1721
AjiI	CACGTC	1 cut(s)	668
AjnI	CCWGG	2 cut(s)	1033, 1560
AleI	CACNNNNGTG	1 cut(s)	1172
Alw21I	GWGCWC	2 cut(s)	1127, 2305
Alw26I	GTCTC	6 cut(s)	14, 215, 233, 377, 1693, 1897
Alw44I	GTGCAC	1 cut(s)	1123
AlwI	GGATC	3 cut(s)	835, 2175, 2250
AlwNI	CAGNNNCTG	1 cut(s)	836
Aor13HI	TCCGGA	1 cut(s)	727
AoxI	GGCC	8 cut(s)	322, 382, 540, 734, 902, 1164, 1303, 2263
ApaLI	GTGCAC	1 cut(s)	1123
ApoI	RAATTY	3 cut(s)	715, 1442, 2214
AsiGI	ACCGGT	1 cut(s)	161
Asp700I	GAANNNNTTC	2 cut(s)	844, 2040
Asp718I	GGTACC	1 cut(s)	1564
AspLEI	GCGC	2 cut(s)	1370, 1799
AspS9I	GGNCC	3 cut(s)	725, 734, 1030
AsuC2I	CCSGG	1 cut(s)	526
AsuHPI	GGTGA	7 cut(s)	133, 370, 628, 900, 1044, 1475, 1500
AvaII	GGWCC	2 cut(s)	725, 1030
BaeGI	GKGCMC	2 cut(s)	1127, 2256
BaeI	ACNNNNGTAYC	2 cut(s)	1055, 1088
BalI	TGGCCA	2 cut(s)	542, 904
BanI	GGYRCC	2 cut(s)	1564, 2253
BanII	GRGCYC	2 cut(s)	483, 2305
BbsI	GAAGAC	3 cut(s)	270, 2043, 2083
Bbv12I	GWGCWC	2 cut(s)	1127, 2305
BccI	CCATC	4 cut(s)	434, 913, 1408, 2117
BceAI	ACGGC	1 cut(s)	1157
BciT130I	CCWGG	2 cut(s)	1035, 1562
BciVI	GTATCC	1 cut(s)	438
BclI	TGATCA	1 cut(s)	2005
BcnI	CCSGG	1 cut(s)	526
BcoDI	GTCTC	6 cut(s)	14, 215, 233, 377, 1693, 1897
BcuI	ACTAGT	1 cut(s)	1721
BfmI	CTRYAG	1 cut(s)	1638
BfrI	CTTAAG	1 cut(s)	677
BfuI	GTATCC	1 cut(s)	438
BlpI	GCTNAGC	1 cut(s)	1207
BmcAI	AGTACT	2 cut(s)	190, 351
Bme1390I	CCNGG	3 cut(s)	526, 1035, 1562
Bme18I	GGWCC	2 cut(s)	725, 1030
BmgBI	CACGTC	1 cut(s)	668
BmgT120I	GGNCC	3 cut(s)	725, 734, 1030
BmiI	GGNNCC	7 cut(s)	29, 480, 516, 1032, 1453, 1566, 2255
BmrFI	CCNGG	3 cut(s)	526, 1035, 1562
BmrI	ACTGGG	2 cut(s)	720, 2154
BmsI	GCATC	3 cut(s)	863, 1514, 1808
BmuI	ACTGGG	2 cut(s)	720, 2154
BpiI	GAAGAC	3 cut(s)	270, 2043, 2083
BpmI	CTGGAG	1 cut(s)	361
Bpu1102I	GCTNAGC	1 cut(s)	1207
BpuMI	CCSGG	1 cut(s)	526
BsaAI	YACGTR	1 cut(s)	1918
BsaBI	GATNNNNATC	1 cut(s)	2004
BsaI	GGTCTC	2 cut(s)	14, 377
BsaJI	CCNNGG	7 cut(s)	319, 325, 385, 525, 1033, 2088, 2144
BsaWI	WCCGGW	2 cut(s)	161, 727
Bsc4I	CCNNNNNNNGG	6 cut(s)	168, 455, 524, 1199, 1252, 1631
Bse118I	RCCGGY	2 cut(s)	161, 380
Bse1I	ACTGG	6 cut(s)	344, 715, 1530, 2037, 2160, 2219
Bse3DI	GCAATG	2 cut(s)	337, 759
Bse8I	GATNNNNATC	1 cut(s)	2004
BseAI	TCCGGA	1 cut(s)	727
BseBI	CCWGG	2 cut(s)	1035, 1562
BseDI	CCNNGG	7 cut(s)	319, 325, 385, 525, 1033, 2088, 2144
BseGI	GGATG	4 cut(s)	356, 445, 577, 878
BseJI	GATNNNNATC	1 cut(s)	2004
BseLI	CCNNNNNNNGG	6 cut(s)	168, 455, 524, 1199, 1252, 1631
BseMI	GCAATG	2 cut(s)	337, 759
BseMII	CTCAG	8 cut(s)	226, 423, 461, 982, 1323, 1478, 1908, 2252
BseNI	ACTGG	6 cut(s)	344, 715, 1530, 2037, 2160, 2219
BseRI	GAGGAG	5 cut(s)	61, 66, 365, 471, 491
BseSI	GKGCMC	2 cut(s)	1127, 2256
BsgI	GTGCAG	2 cut(s)	993, 1437
Bsh1236I	CGCG	1 cut(s)	1368
BshFI	GGCC	8 cut(s)	324, 384, 542, 736, 904, 1166, 1305, 2265
BshNI	GGYRCC	2 cut(s)	1564, 2253
BshTI	ACCGGT	1 cut(s)	161
BsiHKAI	GWGCWC	2 cut(s)	1127, 2305
BsiSI	CCGG	5 cut(s)	162, 381, 518, 525, 728
BslFI	GGGAC	2 cut(s)	766, 1016
BslI	CCNNNNNNNGG	6 cut(s)	168, 455, 524, 1199, 1252, 1631
BsmAI	GTCTC	6 cut(s)	14, 215, 233, 377, 1693, 1897
BsmBI	CGTCTC	1 cut(s)	1897
BsmFI	GGGAC	2 cut(s)	766, 1016
BsmI	GAATGC	4 cut(s)	633, 1022, 1728, 2233
BsnI	GGCC	8 cut(s)	324, 384, 542, 736, 904, 1166, 1305, 2265
Bso31I	GGTCTC	2 cut(s)	14, 377
Bsp1286I	GDGCHC	4 cut(s)	483, 1127, 2256, 2305
Bsp13I	TCCGGA	1 cut(s)	727
Bsp143I	GATC	5 cut(s)	827, 1315, 2005, 2167, 2242
Bsp1720I	GCTNAGC	1 cut(s)	1207
Bsp19I	CCATGG	2 cut(s)	325, 2144
BspACI	CCGC	9 cut(s)	6, 25, 40, 884, 914, 1048, 1067, 1366, 1455
BspANI	GGCC	8 cut(s)	324, 384, 542, 736, 904, 1166, 1305, 2265
BspCNI	CTCAG	8 cut(s)	225, 422, 462, 981, 1322, 1477, 1907, 2251
BspEI	TCCGGA	1 cut(s)	727
BspFNI	CGCG	1 cut(s)	1368
BspHI	TCATGA	1 cut(s)	2190
BspLI	GGNNCC	7 cut(s)	29, 480, 516, 1032, 1453, 1566, 2255
BspPI	GGATC	3 cut(s)	835, 2175, 2250
BspT107I	GGYRCC	2 cut(s)	1564, 2253
BspTI	CTTAAG	1 cut(s)	677
BspTNI	GGTCTC	2 cut(s)	14, 377
BsrBI	CCGCTC	1 cut(s)	1050
BsrDI	GCAATG	2 cut(s)	337, 759
BsrFI	RCCGGY	2 cut(s)	161, 380
BsrI	ACTGG	6 cut(s)	344, 715, 1530, 2037, 2160, 2219
BssAI	RCCGGY	2 cut(s)	161, 380
BssECI	CCNNGG	7 cut(s)	319, 325, 385, 525, 1033, 2088, 2144
BssMI	GATC	5 cut(s)	827, 1315, 2005, 2167, 2242
BssT1I	CCWWGG	4 cut(s)	319, 325, 2088, 2144
Bst2UI	CCWGG	2 cut(s)	1035, 1562
Bst4CI	ACNGT	4 cut(s)	17, 50, 188, 1924
Bst6I	CTCTTC	3 cut(s)	404, 597, 1412
BstAFI	CTTAAG	1 cut(s)	677
BstBAI	YACGTR	1 cut(s)	1918
BstC8I	GCNNGC	2 cut(s)	1968, 2134
BstDSI	CCRYGG	2 cut(s)	325, 2144
BstENI	CCTNNNNNAGG	2 cut(s)	453, 1197
BstF5I	GGATG	4 cut(s)	356, 445, 577, 878
BstFNI	CGCG	1 cut(s)	1368
BstHHI	GCGC	2 cut(s)	1370, 1799
BstKTI	GATC	5 cut(s)	830, 1318, 2008, 2170, 2245
BstMAI	GTCTC	6 cut(s)	14, 215, 233, 377, 1693, 1897
BstMBI	GATC	5 cut(s)	827, 1315, 2005, 2167, 2242
BstMWI	GCNNNNNNNGC	8 cut(s)	689, 805, 830, 842, 980, 1547, 1839, 2295
BstNI	CCWGG	2 cut(s)	1035, 1562
BstNSI	RCATGY	2 cut(s)	1138, 2136
BstSCI	CCNGG	3 cut(s)	524, 1033, 1560
BstSFI	CTRYAG	1 cut(s)	1638
BstSLI	GKGCMC	2 cut(s)	1127, 2256
BstUI	CGCG	1 cut(s)	1368
BstV2I	GAAGAC	3 cut(s)	270, 2043, 2083
BstX2I	RGATCY	1 cut(s)	2167
BstXI	CCANNNNNNTGG	3 cut(s)	326, 332, 958
BstYI	RGATCY	1 cut(s)	2167
BsuI	GTATCC	1 cut(s)	438
BsuRI	GGCC	8 cut(s)	324, 384, 542, 736, 904, 1166, 1305, 2265
BtgI	CCRYGG	2 cut(s)	325, 2144
BtrI	CACGTC	1 cut(s)	668
BtsCI	GGATG	4 cut(s)	356, 445, 577, 878
BtsI	GCAGTG	5 cut(s)	981, 1167, 1584, 1625, 1959
Cac8I	GCNNGC	2 cut(s)	1968, 2134
CaiI	CAGNNNCTG	1 cut(s)	836
CciI	TCATGA	1 cut(s)	2190
CfoI	GCGC	2 cut(s)	1370, 1799
Cfr10I	RCCGGY	2 cut(s)	161, 380
Cfr13I	GGNCC	3 cut(s)	725, 734, 1030
CseI	GACGC	1 cut(s)	651
Csp6I	GTAC	6 cut(s)	172, 189, 257, 350, 1565, 1745
CspAI	ACCGGT	1 cut(s)	161
CviQI	GTAC	6 cut(s)	172, 189, 257, 350, 1565, 1745
DpnI	GATC	5 cut(s)	829, 1317, 2007, 2169, 2244
DpnII	GATC	5 cut(s)	827, 1315, 2005, 2167, 2242
DraIII	CACNNNGTG	1 cut(s)	1058
EaeI	YGGCCR	2 cut(s)	540, 902
Eam1104I	CTCTTC	3 cut(s)	404, 597, 1412
EarI	CTCTTC	3 cut(s)	404, 597, 1412
Ecl136II	GAGCTC	1 cut(s)	2303
Eco130I	CCWWGG	4 cut(s)	319, 325, 2088, 2144
Eco147I	AGGCCT	1 cut(s)	1305
Eco24I	GRGCYC	2 cut(s)	483, 2305
Eco31I	GGTCTC	2 cut(s)	14, 377
Eco47I	GGWCC	2 cut(s)	725, 1030
Eco53kI	GAGCTC	1 cut(s)	2303
Eco57I	CTGAAG	2 cut(s)	1142, 1761
EcoICRI	GAGCTC	1 cut(s)	2303
EcoNI	CCTNNNNNAGG	2 cut(s)	453, 1197
EcoO109I	RGGNCCY	2 cut(s)	734, 1030
EcoRI	GAATTC	1 cut(s)	715
EcoRII	CCWGG	2 cut(s)	1033, 1560
EcoT14I	CCWWGG	4 cut(s)	319, 325, 2088, 2144
EcoT38I	GRGCYC	2 cut(s)	483, 2305
ErhI	CCWWGG	4 cut(s)	319, 325, 2088, 2144
Esp3I	CGTCTC	1 cut(s)	1897
FalI	AAGNNNNNCTT	6 cut(s)	445, 477, 990, 1022, 2278, 2310
FaqI	GGGAC	2 cut(s)	766, 1016
FauI	CCCGC	1 cut(s)	47
FauNDI	CATATG	2 cut(s)	1435, 1519
FbaI	TGATCA	1 cut(s)	2005
FblI	GTMKAC	1 cut(s)	64
FokI	GGATG	4 cut(s)	343, 452, 584, 885
FriOI	GRGCYC	2 cut(s)	483, 2305
GlaI	GCGC	2 cut(s)	1369, 1798
GsuI	CTGGAG	1 cut(s)	361
HaeIII	GGCC	8 cut(s)	324, 384, 542, 736, 904, 1166, 1305, 2265
HapII	CCGG	5 cut(s)	162, 381, 518, 525, 728
HgaI	GACGC	1 cut(s)	651
HhaI	GCGC	2 cut(s)	1370, 1799
Hin6I	GCGC	2 cut(s)	1368, 1797
HinP1I	GCGC	2 cut(s)	1368, 1797
HincII	GTYRAC	3 cut(s)	1110, 1150, 1270
HindII	GTYRAC	3 cut(s)	1110, 1150, 1270
HinfI	GANTC	7 cut(s)	508, 852, 890, 1283, 2011, 2209, 2318
HpaI	GTTAAC	1 cut(s)	1110
HpaII	CCGG	5 cut(s)	162, 381, 518, 525, 728
HphI	GGTGA	7 cut(s)	133, 370, 628, 900, 1044, 1475, 1500
Hpy166II	GTNNAC	7 cut(s)	65, 174, 1110, 1125, 1150, 1270, 2024
Hpy188I	TCNGA	7 cut(s)	215, 1015, 1161, 1897, 2010, 2122, 2247
Hpy8I	GTNNAC	7 cut(s)	65, 174, 1110, 1125, 1150, 1270, 2024
HpyAV	CCTTC	4 cut(s)	649, 725, 1156, 1795
HpyCH4III	ACNGT	4 cut(s)	17, 50, 188, 1924
HpyCH4IV	ACGT	3 cut(s)	667, 1747, 1917
HpyF10VI	GCNNNNNNNGC	8 cut(s)	689, 805, 830, 842, 980, 1547, 1839, 2295
HpySE526I	ACGT	3 cut(s)	667, 1747, 1917
HspAI	GCGC	2 cut(s)	1368, 1797
Kpn2I	TCCGGA	1 cut(s)	727
KpnI	GGTACC	1 cut(s)	1568
Ksp22I	TGATCA	1 cut(s)	2005
KspAI	GTTAAC	1 cut(s)	1110
Kzo9I	GATC	5 cut(s)	827, 1315, 2005, 2167, 2242
LmnI	GCTCC	5 cut(s)	458, 478, 1402, 1457, 1634
LweI	GCATC	3 cut(s)	863, 1514, 1808
MaeII	ACGT	3 cut(s)	667, 1747, 1917
MaeIII	GTNAC	8 cut(s)	50, 663, 697, 991, 1657, 1811, 1918, 2224
MalI	GATC	5 cut(s)	829, 1317, 2007, 2169, 2244
MbiI	CCGCTC	1 cut(s)	1050
MboI	GATC	5 cut(s)	827, 1315, 2005, 2167, 2242
MflI	RGATCY	1 cut(s)	2167
MhlI	GDGCHC	4 cut(s)	483, 1127, 2256, 2305
MlsI	TGGCCA	2 cut(s)	542, 904
MluCI	AATT	7 cut(s)	715, 840, 1442, 1595, 1614, 2016, 2214
MluNI	TGGCCA	2 cut(s)	542, 904
MlyI	GAGTC	1 cut(s)	899
MmeI	TCCRAC	2 cut(s)	1363, 1510
Mox20I	TGGCCA	2 cut(s)	542, 904
MroI	TCCGGA	1 cut(s)	727
MroXI	GAANNNNTTC	2 cut(s)	844, 2040
MscI	TGGCCA	2 cut(s)	542, 904
MseI	TTAA	4 cut(s)	45, 678, 1109, 1341
MslI	CAYNNNNRTG	3 cut(s)	330, 956, 1172
Msp20I	TGGCCA	2 cut(s)	542, 904
MspA1I	CMGCKG	5 cut(s)	833, 914, 1069, 1313, 1330
MspCI	CTTAAG	1 cut(s)	677
MspI	CCGG	5 cut(s)	162, 381, 518, 525, 728
MspR9I	CCNGG	3 cut(s)	526, 1035, 1562
Mva1269I	GAATGC	4 cut(s)	633, 1022, 1728, 2233
MvaI	CCWGG	2 cut(s)	1035, 1562
MvnI	CGCG	1 cut(s)	1368
MwoI	GCNNNNNNNGC	8 cut(s)	689, 805, 830, 842, 980, 1547, 1839, 2295
NciI	CCSGG	1 cut(s)	526
NcoI	CCATGG	2 cut(s)	325, 2144
NdeI	CATATG	2 cut(s)	1435, 1519
NdeII	GATC	5 cut(s)	827, 1315, 2005, 2167, 2242
NlaIV	GGNNCC	7 cut(s)	29, 480, 516, 1032, 1453, 1566, 2255
NmuCI	GTSAC	5 cut(s)	50, 663, 697, 1811, 1918
NspI	RCATGY	2 cut(s)	1138, 2136
OliI	CACNNNNGTG	1 cut(s)	1172
PaeI	GCATGC	1 cut(s)	2136
PagI	TCATGA	1 cut(s)	2190
PceI	AGGCCT	1 cut(s)	1305
PciI	ACATGT	1 cut(s)	1134
PctI	GAATGC	4 cut(s)	633, 1022, 1728, 2233
PdmI	GAANNNNTTC	2 cut(s)	844, 2040
PfeI	GAWTC	6 cut(s)	508, 852, 1283, 2011, 2209, 2318
PflMI	CCANNNNNTGG	1 cut(s)	1631
PinAI	ACCGGT	1 cut(s)	161
PleI	GAGTC	1 cut(s)	898
PpsI	GAGTC	1 cut(s)	898
Ppu21I	YACGTR	1 cut(s)	1918
PpuMI	RGGWCCY	1 cut(s)	1030
PscI	ACATGT	1 cut(s)	1134
Psp124BI	GAGCTC	1 cut(s)	2305
Psp5II	RGGWCCY	1 cut(s)	1030
Psp6I	CCWGG	2 cut(s)	1033, 1560
PspGI	CCWGG	2 cut(s)	1033, 1560
PspN4I	GGNNCC	7 cut(s)	29, 480, 516, 1032, 1453, 1566, 2255
PspPI	GGNCC	3 cut(s)	725, 734, 1030
PspPPI	RGGWCCY	1 cut(s)	1030
PstNI	CAGNNNCTG	1 cut(s)	836
PsuI	RGATCY	1 cut(s)	2167
PvuII	CAGCTG	3 cut(s)	833, 1313, 1330
RsaI	GTAC	6 cut(s)	173, 190, 258, 351, 1566, 1746
RsaNI	GTAC	6 cut(s)	172, 189, 257, 350, 1565, 1745
RseI	CAYNNNNRTG	3 cut(s)	330, 956, 1172
SacI	GAGCTC	1 cut(s)	2305
SaqAI	TTAA	4 cut(s)	45, 678, 1109, 1341
Sau3AI	GATC	5 cut(s)	827, 1315, 2005, 2167, 2242
Sau96I	GGNCC	3 cut(s)	725, 734, 1030
ScaI	AGTACT	2 cut(s)	190, 351
SchI	GAGTC	1 cut(s)	899
ScrFI	CCNGG	3 cut(s)	526, 1035, 1562
SduI	GDGCHC	4 cut(s)	483, 1127, 2256, 2305
SfaNI	GCATC	3 cut(s)	863, 1514, 1808
SfcI	CTRYAG	1 cut(s)	1638
SinI	GGWCC	2 cut(s)	725, 1030
SmiMI	CAYNNNNRTG	3 cut(s)	330, 956, 1172
SmlI	CTYRAG	1 cut(s)	677
SmoI	CTYRAG	1 cut(s)	677
SpeI	ACTAGT	1 cut(s)	1721
SphI	GCATGC	1 cut(s)	2136
Sse9I	AATT	7 cut(s)	715, 840, 1442, 1595, 1614, 2016, 2214
SseBI	AGGCCT	1 cut(s)	1305
SsiI	CCGC	9 cut(s)	6, 25, 40, 884, 914, 1048, 1067, 1366, 1455
SstI	GAGCTC	1 cut(s)	2305
StuI	AGGCCT	1 cut(s)	1305
StyD4I	CCNGG	3 cut(s)	524, 1033, 1560
StyI	CCWWGG	4 cut(s)	319, 325, 2088, 2144
TaaI	ACNGT	4 cut(s)	17, 50, 188, 1924
TaiI	ACGT	3 cut(s)	670, 1750, 1920
TaqI	TCGA	2 cut(s)	1288, 1612
TasI	AATT	7 cut(s)	715, 840, 1442, 1595, 1614, 2016, 2214
TatI	WGTACW	3 cut(s)	188, 256, 349
TauI	GCSGC	1 cut(s)	1368
TfiI	GAWTC	6 cut(s)	508, 852, 1283, 2011, 2209, 2318
Tru1I	TTAA	4 cut(s)	45, 678, 1109, 1341
Tru9I	TTAA	4 cut(s)	45, 678, 1109, 1341
TseFI	GTSAC	5 cut(s)	50, 663, 697, 1811, 1918
Tsp45I	GTSAC	5 cut(s)	50, 663, 697, 1811, 1918
TspGWI	ACGGA	2 cut(s)	111, 1880
Van91I	CCANNNNNTGG	1 cut(s)	1631
Vha464I	CTTAAG	1 cut(s)	677
VneI	GTGCAC	1 cut(s)	1123
VpaK11BI	GGWCC	2 cut(s)	725, 1030
XagI	CCTNNNNNAGG	2 cut(s)	453, 1197
XapI	RAATTY	3 cut(s)	715, 1442, 2214
XbaI	TCTAGA	1 cut(s)	1775
XceI	RCATGY	2 cut(s)	1138, 2136
XmiI	GTMKAC	1 cut(s)	64
XmnI	GAANNNNTTC	2 cut(s)	844, 2040
ZrmI	AGTACT	2 cut(s)	190, 351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.