Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0011658

Physical Location & Seq

Genomic Coordinates Forward (+)

45483980 .. 45485826

Gene Structure 1847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0303600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGGCTAGGTCTTTAGCTCTCTCTCTTTGCTTGCTTGTTCTCTTTCATGGCTGCTTAGCCTATCGCCAACAGTCTCAGTACAGCCAGAGCGGGCAAAATGAGTGCCAGATCAACCAGCTCCAGGCCCGCGAGCCCGACAACCGCATTGAGACTGAGGCGGGTCGGATCGAGTCATGGGACTACAACCAGGATGATTTCCAGTGCGCCGGAGTCGCCGTTCAGAGAATCATTGTCGAGCGCAACGGCCTTCACTTGCCTTCTTACACCAACACTCCTCGCATCGTTTACGTTGTCCAAGGTAGGGGTCATCTAGGAATGGTGATGCCCGGCTGTCCAGAGACATTTGAGGAGTCCGAGCAATCTGACGAGGAACAACAGGGCTCGCAACAACAACCATCGCAAGGCCGACAAGGCCGCCAGCAACAGGGACGCCGACAAGGACAATATGGACGAGAAGGCCAACAGGGACAGCAAGAGAGCTTCGAACAGCTAGACCGACACCAGAGGGTGCGACGCGTCAAGGAAGGTGACGTTATCGCCATCCCCGCCGGAGTCACAACCTGGTCCTACAACGACGGTGACCAATCTCTCATTTTTGTCAGTCTTCTAGACATCAGCAACAATCACAACCAGCTTGACCAAAACCCAAGGCGATTCTATCTTGCTGGTAACCCACAAGATGAGTTCAACCAACAAGGCCAAAGCCGAGGCCAATCGAGACAACAACAAGAACAACAGGGAAGGAGCAGACGCCAACAACAGGGAAACAACAACAACAACATCTTCGCCGGATTCGACACCAGACTCCTCGCCGATGCTCTCAACATCGACCAACAGACCGCTCAGCAGCTCCAGGGACAGAACGACAACAGGCCACAGATTGTTAGGGTTCAGGGACGTCTCGACTTCATCCAGCCCCCTGAGTCAATGAGGGAGGAAAGACAACTGCAAGGACAACAGGGACAGAATGGCTTTGAGGAGGTATTCTGCCACATGAAGATCAAGCAGAACATCGGCAAGCCTTCATTGGCCGACGTCTTCAGCCCGCAAGCCGGTCGTATCAGCACCCTCAACGGCTTCAGCATGCCTATTCTCAGGCACCTCCGCCTCAGTGCTGAGAGAGGTTTCTTGTACAACAATGCTATCCACAGCCCACACTGGAACTTGAATGCCCATGAGATAGTCTATGTCATCAGAGGTAGCGCCAGGGTTCAGGTGGTGAACGACAACGGCGAGACCATCTTGGACGACCAGGTCCGCCAGGGACAGCTCTTCGTCGTGCCACAGAACCATGCCGTGTTGCAAAAGGCCATGAGCAACGGATACGAGTACATTGCCTTCAAGACCGATGACAATGCCATGATGAACACCATGGCTGGCAGGACCTCCGTCCTGCGGGCACTCCCCGACGTGGTCCTCGCCAACGCCTACCAGATGGACCGTGAGCAGGCAAGGAACCTCAAATACAACAGGCAGGAGACCCTTGCCTTGAGCTCCTCAAGGTCTTTCCAGTCACAGAGGAGCTGGTGGGCTGTTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005801 GO:0006810 GO:0006890 GO:0008150 GO:0012505 GO:0016192 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048193 GO:0051179 GO:0051234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rer1

Protein Analysis

513

Amino Acids

58.46

Weight (kDa)

6.62

Isoelectric Point (pI)

62.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	41 - 225	8.8e-28	Cupin
Cupin_1	PF00190	337 - 484	1.2e-38	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011658)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g39600 FvH4_2g39600
malus_domestica	MD08G1029200.v1.1 MD15G1024700.v1.1
prunus_persica	Prupe.1G377000_v2.0.a1
pyrus_communis	pycom08g02300
rosa_chinensis	RchiOBHm_Chr6g0301321
rosa_multiflora	Rmu_co8357351.1_g000001 Rmu_sc0003197.1_g000010 Rmu_sc0013354.1_g000020
rosa_roxburghii	Rroxscaffold_7G00166920
rosa_rugosa	Rorug06G0303400 Rorug06G0303500 Rorug06G0303600
rosa_samantha	Rh6AG417200 Rh6BG423800 Rh6CG431000 Rh6DG416900
rosa_wichuraiana	Rw6G036100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1253
AatII	GACGTC	2 cut(s)	901, 1038
AccB1I	GGYRCC	1 cut(s)	1098
AccBSI	CCGCTC	2 cut(s)	90, 842
AccII	CGCG	2 cut(s)	129, 516
AclWI	GGATC	1 cut(s)	173
AcoI	YGGCCR	1 cut(s)	1029
AcuI	CTGAAG	2 cut(s)	1024, 1063
AcyI	GRCGYC	4 cut(s)	430, 751, 898, 1035
AfaI	GTAC	3 cut(s)	80, 1133, 1331
AfiI	CCNNNNNNNGG	9 cut(s)	121, 301, 401, 424, 760, 1052, 1395, 1411, 1447
AflIII	ACRYGT	1 cut(s)	514
AgsI	TTSAA	3 cut(s)	688, 1168, 1342
AjiI	CACGTC	1 cut(s)	1411
AjnI	CCWGG	7 cut(s)	120, 186, 560, 852, 1205, 1251, 1260
AloI	GAACNNNNNNTCC	2 cut(s)	201, 233
AluBI	AGCT	9 cut(s)	17, 118, 480, 490, 634, 850, 1270, 1494, 1524
AluI	AGCT	9 cut(s)	17, 118, 480, 490, 634, 850, 1270, 1494, 1524
Alw21I	GWGCWC	1 cut(s)	1496
Alw26I	GTCTC	7 cut(s)	78, 143, 332, 712, 905, 1229, 1472
AlwI	GGATC	1 cut(s)	173
ApeKI	GCWGC	2 cut(s)	51, 847
AspLEI	GCGC	3 cut(s)	206, 240, 1205
AspS9I	GGNCC	6 cut(s)	124, 564, 1255, 1383, 1414, 1438
AsuC2I	CCSGG	1 cut(s)	327
AsuHPI	GGTGA	4 cut(s)	331, 539, 590, 1231
AsuII	TTCGAA	1 cut(s)	483
AvaII	GGWCC	5 cut(s)	564, 1255, 1383, 1414, 1438
BaeGI	GKGCMC	1 cut(s)	1402
BanI	GGYRCC	1 cut(s)	1098
BanII	GRGCYC	3 cut(s)	135, 383, 1496
BarI	GAAGNNNNNNTAC	2 cut(s)	1322, 1354
BbsI	GAAGAC	2 cut(s)	596, 1030
Bbv12I	GWGCWC	1 cut(s)	1496
BbvI	GCAGC	2 cut(s)	38, 859
BccI	CCATC	4 cut(s)	403, 548, 1247, 1429
BceAI	ACGGC	5 cut(s)	200, 259, 1090, 1246, 1280
BcgI	CGANNNNNNTGC	6 cut(s)	1037, 1071, 1316, 1337, 1350, 1371
BciT130I	CCWGG	7 cut(s)	122, 188, 562, 854, 1207, 1253, 1262
BciVI	GTATCC	1 cut(s)	1316
BcnI	CCSGG	1 cut(s)	327
BcoDI	GTCTC	7 cut(s)	78, 143, 332, 712, 905, 1229, 1472
BfaI	CTAG	4 cut(s)	6, 311, 491, 608
BfoI	RGCGCY	1 cut(s)	1206
BfuI	GTATCC	1 cut(s)	1316
BglI	GCCNNNNNGGC	1 cut(s)	411
BisI	GCNGC	3 cut(s)	52, 415, 848
BlpI	GCTNAGC	2 cut(s)	55, 843
BlsI	GCNGC	3 cut(s)	53, 416, 849
Bme1390I	CCNGG	8 cut(s)	122, 188, 327, 562, 854, 1207, 1253, 1262
Bme18I	GGWCC	5 cut(s)	564, 1255, 1383, 1414, 1438
BmgBI	CACGTC	1 cut(s)	1411
BmgT120I	GGNCC	6 cut(s)	124, 564, 1255, 1383, 1414, 1438
BmiI	GGNNCC	2 cut(s)	1100, 1457
BmrFI	CCNGG	8 cut(s)	122, 188, 327, 562, 854, 1207, 1253, 1262
BmsI	GCATC	3 cut(s)	288, 312, 805
BoxI	GACNNNNGTC	1 cut(s)	1388
BpiI	GAAGAC	2 cut(s)	596, 1030
BpmI	CTGGAG	2 cut(s)	104, 836
Bpu1102I	GCTNAGC	2 cut(s)	55, 843
Bpu14I	TTCGAA	1 cut(s)	483
BpuEI	CTTGAG	2 cut(s)	1483, 1510
BpuMI	CCSGG	1 cut(s)	327
BsaHI	GRCGYC	4 cut(s)	430, 751, 898, 1035
BsaI	GGTCTC	2 cut(s)	1229, 1472
BsaJI	CCNNGG	7 cut(s)	295, 647, 706, 853, 1206, 1261, 1371
BsaXI	ACNNNNNCTCC	4 cut(s)	201, 231, 256, 286
Bsc4I	CCNNNNNNNGG	9 cut(s)	121, 301, 401, 424, 760, 1052, 1395, 1411, 1447
Bse118I	RCCGGY	1 cut(s)	1052
Bse1I	ACTGG	3 cut(s)	199, 1163, 1510
Bse3DI	GCAATG	1 cut(s)	1332
BseBI	CCWGG	7 cut(s)	122, 188, 562, 854, 1207, 1253, 1262
BseDI	CCNNGG	7 cut(s)	295, 647, 706, 853, 1206, 1261, 1371
BseGI	GGATG	3 cut(s)	196, 540, 909
BseLI	CCNNNNNNNGG	9 cut(s)	121, 301, 401, 424, 760, 1052, 1395, 1411, 1447
BseMI	GCAATG	1 cut(s)	1332
BseMII	CTCAG	7 cut(s)	89, 144, 857, 912, 1107, 1108, 1123
BseNI	ACTGG	3 cut(s)	199, 1163, 1510
BseRI	GAGGAG	6 cut(s)	264, 362, 797, 992, 1486, 1534
BseSI	GKGCMC	1 cut(s)	1402
BseXI	GCAGC	2 cut(s)	38, 859
Bsh1236I	CGCG	2 cut(s)	129, 516
Bsh1285I	CGRYCG	1 cut(s)	1057
BshNI	GGYRCC	1 cut(s)	1098
BsiEI	CGRYCG	1 cut(s)	1057
BsiHKAI	GWGCWC	1 cut(s)	1496
BsiSI	CCGG	5 cut(s)	207, 327, 549, 789, 1053
BslFI	GGGAC	7 cut(s)	191, 441, 480, 870, 909, 975, 1278
BslI	CCNNNNNNNGG	9 cut(s)	121, 301, 401, 424, 760, 1052, 1395, 1411, 1447
BsmAI	GTCTC	7 cut(s)	78, 143, 332, 712, 905, 1229, 1472
BsmBI	CGTCTC	1 cut(s)	905
BsmFI	GGGAC	7 cut(s)	191, 441, 480, 870, 909, 975, 1278
BsmI	GAATGC	1 cut(s)	1174
Bso31I	GGTCTC	2 cut(s)	1229, 1472
Bsp119I	TTCGAA	1 cut(s)	483
Bsp1286I	GDGCHC	4 cut(s)	135, 383, 1402, 1496
Bsp1407I	TGTACA	1 cut(s)	1131
Bsp143I	GATC	3 cut(s)	108, 165, 999
Bsp1720I	GCTNAGC	2 cut(s)	55, 843
Bsp19I	CCATGG	1 cut(s)	1371
BspCNI	CTCAG	7 cut(s)	88, 145, 856, 913, 1107, 1108, 1122
BspFNI	CGCG	2 cut(s)	129, 516
BspLI	GGNNCC	2 cut(s)	1100, 1457
BspPI	GGATC	1 cut(s)	173
BspQI	GCTCTTC	1 cut(s)	1277
BspT104I	TTCGAA	1 cut(s)	483
BspT107I	GGYRCC	1 cut(s)	1098
BspTNI	GGTCTC	2 cut(s)	1229, 1472
BsrBI	CCGCTC	2 cut(s)	90, 842
BsrDI	GCAATG	1 cut(s)	1332
BsrFI	RCCGGY	1 cut(s)	1052
BsrGI	TGTACA	1 cut(s)	1131
BsrI	ACTGG	3 cut(s)	199, 1163, 1510
BssAI	RCCGGY	1 cut(s)	1052
BssECI	CCNNGG	7 cut(s)	295, 647, 706, 853, 1206, 1261, 1371
BssMI	GATC	3 cut(s)	108, 165, 999
BssNI	GRCGYC	4 cut(s)	430, 751, 898, 1035
BssT1I	CCWWGG	3 cut(s)	295, 647, 1371
Bst2UI	CCWGG	7 cut(s)	122, 188, 562, 854, 1207, 1253, 1262
Bst4CI	ACNGT	3 cut(s)	72, 578, 1442
Bst6I	CTCTTC	1 cut(s)	1277
BstACI	GRCGYC	4 cut(s)	430, 751, 898, 1035
BstAUI	TGTACA	1 cut(s)	1131
BstBI	TTCGAA	1 cut(s)	483
BstDEI	CTNAG	8 cut(s)	55, 75, 153, 843, 921, 1094, 1109, 1116
BstDSI	CCRYGG	1 cut(s)	1371
BstEII	GGTNACC	2 cut(s)	578, 668
BstF5I	GGATG	3 cut(s)	196, 540, 909
BstFNI	CGCG	2 cut(s)	129, 516
BstH2I	RGCGCY	1 cut(s)	1206
BstHHI	GCGC	3 cut(s)	206, 240, 1205
BstKTI	GATC	3 cut(s)	111, 168, 1002
BstMAI	GTCTC	7 cut(s)	78, 143, 332, 712, 905, 1229, 1472
BstMBI	GATC	3 cut(s)	108, 165, 999
BstMCI	CGRYCG	1 cut(s)	1057
BstMWI	GCNNNNNNNGC	3 cut(s)	212, 411, 545
BstNI	CCWGG	7 cut(s)	122, 188, 562, 854, 1207, 1253, 1262
BstNSI	RCATGY	1 cut(s)	1087
BstPAI	GACNNNNGTC	1 cut(s)	1388
BstPI	GGTNACC	2 cut(s)	578, 668
BstSCI	CCNGG	8 cut(s)	120, 186, 325, 560, 852, 1205, 1251, 1260
BstSLI	GKGCMC	1 cut(s)	1402
BstUI	CGCG	2 cut(s)	129, 516
BstV1I	GCAGC	2 cut(s)	38, 859
BstV2I	GAAGAC	2 cut(s)	596, 1030
BsuI	GTATCC	1 cut(s)	1316
BtgI	CCRYGG	1 cut(s)	1371
BtgZI	GCGATG	1 cut(s)	381
BtrI	CACGTC	1 cut(s)	1411
BtsCI	GGATG	3 cut(s)	196, 540, 909
BtsIMutI	CAGTG	3 cut(s)	206, 1117, 1156
CfoI	GCGC	3 cut(s)	206, 240, 1205
Cfr10I	RCCGGY	1 cut(s)	1052
Cfr13I	GGNCC	6 cut(s)	124, 564, 1255, 1383, 1414, 1438
CseI	GACGC	4 cut(s)	438, 505, 522, 759
CsiI	ACCWGGT	2 cut(s)	560, 1251
Csp6I	GTAC	3 cut(s)	79, 1132, 1330
CviAII	CATG	9 cut(s)	47, 174, 994, 1084, 1175, 1292, 1312, 1360, 1372
CviQI	GTAC	3 cut(s)	79, 1132, 1330
DdeI	CTNAG	8 cut(s)	55, 75, 153, 843, 921, 1094, 1109, 1116
DpnI	GATC	3 cut(s)	110, 167, 1001
DpnII	GATC	3 cut(s)	108, 165, 999
DrdI	GACNNNNNNGTC	1 cut(s)	1253
DseDI	GACNNNNNNGTC	1 cut(s)	1253
EaeI	YGGCCR	1 cut(s)	1029
Eam1104I	CTCTTC	1 cut(s)	1277
EarI	CTCTTC	1 cut(s)	1277
EciI	GGCGGA	2 cut(s)	1094, 1247
Ecl136II	GAGCTC	1 cut(s)	1494
Eco130I	CCWWGG	3 cut(s)	295, 647, 1371
Eco24I	GRGCYC	3 cut(s)	135, 383, 1496
Eco31I	GGTCTC	2 cut(s)	1229, 1472
Eco47I	GGWCC	5 cut(s)	564, 1255, 1383, 1414, 1438
Eco53kI	GAGCTC	1 cut(s)	1494
Eco57I	CTGAAG	2 cut(s)	1024, 1063
Eco91I	GGTNACC	2 cut(s)	578, 668
EcoICRI	GAGCTC	1 cut(s)	1494
EcoO109I	RGGNCCY	1 cut(s)	1383
EcoO65I	GGTNACC	2 cut(s)	578, 668
EcoRII	CCWGG	7 cut(s)	120, 186, 560, 852, 1205, 1251, 1260
EcoT14I	CCWWGG	3 cut(s)	295, 647, 1371
EcoT38I	GRGCYC	3 cut(s)	135, 383, 1496
ErhI	CCWWGG	3 cut(s)	295, 647, 1371
Esp3I	CGTCTC	1 cut(s)	905
FaeI	CATG	9 cut(s)	50, 177, 997, 1087, 1178, 1295, 1315, 1363, 1375
FaqI	GGGAC	7 cut(s)	191, 441, 480, 870, 909, 975, 1278
FatI	CATG	9 cut(s)	46, 173, 993, 1083, 1174, 1291, 1311, 1359, 1371
FauI	CCCGC	6 cut(s)	83, 134, 151, 553, 1053, 1389
Fnu4HI	GCNGC	3 cut(s)	52, 415, 848
FokI	GGATG	3 cut(s)	203, 527, 896
FriOI	GRGCYC	3 cut(s)	135, 383, 1496
Fsp4HI	GCNGC	3 cut(s)	52, 415, 848
FspBI	CTAG	4 cut(s)	6, 311, 491, 608
GlaI	GCGC	3 cut(s)	205, 239, 1204
GluI	GCNGC	3 cut(s)	52, 415, 848
GsuI	CTGGAG	2 cut(s)	104, 836
HaeII	RGCGCY	1 cut(s)	1206
HapII	CCGG	5 cut(s)	207, 327, 549, 789, 1053
HgaI	GACGC	4 cut(s)	438, 505, 522, 759
HhaI	GCGC	3 cut(s)	206, 240, 1205
Hin1I	GRCGYC	4 cut(s)	430, 751, 898, 1035
Hin1II	CATG	9 cut(s)	50, 177, 997, 1087, 1178, 1295, 1315, 1363, 1375
Hin6I	GCGC	3 cut(s)	204, 238, 1203
HinP1I	GCGC	3 cut(s)	204, 238, 1203
HinfI	GANTC	9 cut(s)	170, 210, 225, 350, 552, 654, 792, 804, 923
HpaII	CCGG	5 cut(s)	207, 327, 549, 789, 1053
HphI	GGTGA	4 cut(s)	331, 539, 590, 1231
Hpy166II	GTNNAC	2 cut(s)	286, 1222
Hpy188I	TCNGA	5 cut(s)	165, 222, 355, 364, 1196
Hpy188III	TCNNGA	5 cut(s)	335, 608, 717, 902, 1342
Hpy8I	GTNNAC	2 cut(s)	286, 1222
Hpy99I	CGWCG	5 cut(s)	516, 578, 1037, 1280, 1412
HpyAV	CCTTC	7 cut(s)	257, 267, 449, 518, 735, 1032, 1348
HpyCH4III	ACNGT	3 cut(s)	72, 578, 1442
HpyCH4IV	ACGT	5 cut(s)	288, 531, 898, 1035, 1410
HpyCH4V	TGCA	2 cut(s)	949, 1303
HpyF10VI	GCNNNNNNNGC	3 cut(s)	212, 411, 545
HpyF3I	CTNAG	8 cut(s)	55, 75, 153, 843, 921, 1094, 1109, 1116
HpySE526I	ACGT	5 cut(s)	288, 531, 898, 1035, 1410
Hsp92I	GRCGYC	4 cut(s)	430, 751, 898, 1035
Hsp92II	CATG	9 cut(s)	50, 177, 997, 1087, 1178, 1295, 1315, 1363, 1375
HspAI	GCGC	3 cut(s)	204, 238, 1203
Kzo9I	GATC	3 cut(s)	108, 165, 999
LguI	GCTCTTC	1 cut(s)	1277
LmnI	GCTCC	5 cut(s)	123, 744, 855, 1499, 1521
Lsp1109I	GCAGC	2 cut(s)	38, 859
LweI	GCATC	3 cut(s)	288, 312, 805
MabI	ACCWGGT	2 cut(s)	560, 1251
MaeI	CTAG	4 cut(s)	6, 311, 491, 608
MaeII	ACGT	5 cut(s)	288, 531, 898, 1035, 1410
MaeIII	GTNAC	5 cut(s)	527, 553, 578, 668, 1512
MalI	GATC	3 cut(s)	110, 167, 1001
MbiI	CCGCTC	2 cut(s)	90, 842
MboI	GATC	3 cut(s)	108, 165, 999
MboII	GAAGA	5 cut(s)	596, 775, 1009, 1030, 1264
MhlI	GDGCHC	4 cut(s)	135, 383, 1402, 1496
MluI	ACGCGT	1 cut(s)	514
MlyI	GAGTC	6 cut(s)	179, 219, 359, 561, 798, 932
MmeI	TCCRAC	1 cut(s)	143
MseI	TTAA	1 cut(s)	1540
MspI	CCGG	5 cut(s)	207, 327, 549, 789, 1053
MspR9I	CCNGG	8 cut(s)	122, 188, 327, 562, 854, 1207, 1253, 1262
Mva1269I	GAATGC	1 cut(s)	1174
MvaI	CCWGG	7 cut(s)	122, 188, 562, 854, 1207, 1253, 1262
MvnI	CGCG	2 cut(s)	129, 516
MwoI	GCNNNNNNNGC	3 cut(s)	212, 411, 545
NciI	CCSGG	1 cut(s)	327
NcoI	CCATGG	1 cut(s)	1371
NdeII	GATC	3 cut(s)	108, 165, 999
NlaIII	CATG	9 cut(s)	50, 177, 997, 1087, 1178, 1295, 1315, 1363, 1375
NlaIV	GGNNCC	2 cut(s)	1100, 1457
NmeAIII	GCCGAG	1 cut(s)	731
NmuCI	GTSAC	4 cut(s)	527, 553, 578, 1512
NspI	RCATGY	1 cut(s)	1087
NspV	TTCGAA	1 cut(s)	483
PaeI	GCATGC	1 cut(s)	1087
PciSI	GCTCTTC	1 cut(s)	1277
PcsI	WCGNNNNNNNCGW	2 cut(s)	792, 1230
PctI	GAATGC	1 cut(s)	1174
PfeI	GAWTC	3 cut(s)	225, 654, 792
PflFI	GACNNNGTC	2 cut(s)	1253, 1412
PkrI	GCNGC	3 cut(s)	53, 416, 849
PleI	GAGTC	6 cut(s)	178, 218, 358, 560, 798, 931
PpsI	GAGTC	6 cut(s)	178, 218, 358, 560, 798, 931
PpuMI	RGGWCCY	1 cut(s)	1383
PshAI	GACNNNNGTC	1 cut(s)	1388
Psp124BI	GAGCTC	1 cut(s)	1496
Psp5II	RGGWCCY	1 cut(s)	1383
Psp6I	CCWGG	7 cut(s)	120, 186, 560, 852, 1205, 1251, 1260
PspEI	GGTNACC	2 cut(s)	578, 668
PspGI	CCWGG	7 cut(s)	120, 186, 560, 852, 1205, 1251, 1260
PspN4I	GGNNCC	2 cut(s)	1100, 1457
PspPI	GGNCC	6 cut(s)	124, 564, 1255, 1383, 1414, 1438
PspPPI	RGGWCCY	1 cut(s)	1383
PsrI	GAACNNNNNNTAC	2 cut(s)	1448, 1480
PsyI	GACNNNGTC	2 cut(s)	1253, 1412
RsaI	GTAC	3 cut(s)	80, 1133, 1331
RsaNI	GTAC	3 cut(s)	79, 1132, 1330
SacI	GAGCTC	1 cut(s)	1496
SapI	GCTCTTC	1 cut(s)	1277
SaqAI	TTAA	1 cut(s)	1540
SatI	GCNGC	3 cut(s)	52, 415, 848
Sau3AI	GATC	3 cut(s)	108, 165, 999
Sau96I	GGNCC	6 cut(s)	124, 564, 1255, 1383, 1414, 1438
SchI	GAGTC	6 cut(s)	179, 219, 359, 561, 798, 932
ScrFI	CCNGG	8 cut(s)	122, 188, 327, 562, 854, 1207, 1253, 1262
SduI	GDGCHC	4 cut(s)	135, 383, 1402, 1496
SexAI	ACCWGGT	2 cut(s)	560, 1251
SfaNI	GCATC	3 cut(s)	288, 312, 805
SfiI	GGCCNNNNNGGCC	1 cut(s)	411
SfuI	TTCGAA	1 cut(s)	483
SinI	GGWCC	5 cut(s)	564, 1255, 1383, 1414, 1438
SmlI	CTYRAG	2 cut(s)	1489, 1498
SmoI	CTYRAG	2 cut(s)	1489, 1498
SphI	GCATGC	1 cut(s)	1087
SspMI	CTAG	4 cut(s)	6, 311, 491, 608
SstI	GAGCTC	1 cut(s)	1496
StyD4I	CCNGG	8 cut(s)	120, 186, 325, 560, 852, 1205, 1251, 1260
StyI	CCWWGG	3 cut(s)	295, 647, 1371
TaaI	ACNGT	3 cut(s)	72, 578, 1442
TaiI	ACGT	5 cut(s)	291, 534, 901, 1038, 1413
TaqI	TCGA	7 cut(s)	168, 234, 483, 716, 795, 828, 903
TaqII	GACCGA	2 cut(s)	510, 1361
TatI	WGTACW	3 cut(s)	78, 1131, 1329
TauI	GCSGC	1 cut(s)	417
TfiI	GAWTC	3 cut(s)	225, 654, 792
Tru1I	TTAA	1 cut(s)	1540
Tru9I	TTAA	1 cut(s)	1540
TscAI	CASTG	3 cut(s)	206, 1117, 1163
TseFI	GTSAC	4 cut(s)	527, 553, 578, 1512
TseI	GCWGC	2 cut(s)	51, 847
Tsp45I	GTSAC	4 cut(s)	527, 553, 578, 1512
TspDTI	ATGAA	5 cut(s)	35, 898, 1010, 1014, 1379
TspGWI	ACGGA	2 cut(s)	1335, 1378
TspRI	CASTG	3 cut(s)	206, 1117, 1163
Tth111I	GACNNNGTC	2 cut(s)	1253, 1412
VpaK11BI	GGWCC	5 cut(s)	564, 1255, 1383, 1414, 1438
XbaI	TCTAGA	1 cut(s)	607
XceI	RCATGY	1 cut(s)	1087
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1213
XspI	CTAG	4 cut(s)	6, 311, 491, 608
ZraI	GACGTC	2 cut(s)	899, 1036

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.