Rorug06G0304900

This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
45597455 .. 45597898
444 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0304900.1

Sequence Viewer

Length: 444 bp
ATGGATTGGGATAGGGATTTGGAACTTATATTCATTCAATTCAAAGATGTGCCGTTCTCGTACTCTGTGGAACGAGGTTTAGCTGATGAAACAGTGGATGATATCAAAGAAAAACTTAGGAAGGAATATCCAAATGGTAGACACCTTCAGCCCCAAGAATCCCTTGTTTACAAGAATCGAGAACTGAAGGATGGACACCTGATGGTCGACTATCATCTTCCTAAGAATGCCATCCTTTATATAGCTGAGAGGAACGCTACTCCGTCAAGCCCTAAGAACCTAAAAGAGAAAGATGAAGGGCCCTGGGATTTGGGTGTCATTCAATCAGTGAAACACAAGCAACTTCGACCAGTGGATTTATTAACAGTGGACGAGCCCTTTTACAACAACCCTTTTATTAAGGAGTCGGCATGCGGGAAGGAAATACAAGAAGACATTTGTTGA

Protein Analysis

147

Amino Acids

17.19

Weight (kDa)

5.13

Isoelectric Point (pI)

45.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011737)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 139, 207
AciI CCGC 1 cut(s) 414
AcuI CTGAAG 2 cut(s) 131, 206
AfaI GTAC 1 cut(s) 62
AgsI TTSAA 3 cut(s) 38, 43, 323
AjnI CCWGG 1 cut(s) 302
AluBI AGCT 2 cut(s) 83, 245
AluI AGCT 2 cut(s) 83, 245
AoxI GGCC 1 cut(s) 299
ApaI GGGCCC 1 cut(s) 303
AspS9I GGNCC 2 cut(s) 299, 300
BaeGI GKGCMC 1 cut(s) 303
BanII GRGCYC 2 cut(s) 303, 378
BbsI GAAGAC 1 cut(s) 438
BccI CCATC 3 cut(s) 185, 196, 239
BceAI ACGGC 1 cut(s) 37
BciT130I CCWGG 1 cut(s) 304
Bme1390I CCNGG 1 cut(s) 304
BmgT120I GGNCC 2 cut(s) 299, 300
BmiI GGNNCC 1 cut(s) 301
BmrFI CCNGG 1 cut(s) 304
BpiI GAAGAC 1 cut(s) 438
BsaJI CCNNGG 2 cut(s) 302, 303
Bse1I ACTGG 1 cut(s) 350
BseBI CCWGG 1 cut(s) 304
BseDI CCNNGG 2 cut(s) 302, 303
BseGI GGATG 3 cut(s) 103, 196, 231
BseMII CTCAG 1 cut(s) 237
BseNI ACTGG 1 cut(s) 350
BseSI GKGCMC 1 cut(s) 303
BshFI GGCC 1 cut(s) 301
BsmI GAATGC 1 cut(s) 232
BsnI GGCC 1 cut(s) 301
Bsp120I GGGCCC 1 cut(s) 299
Bsp1286I GDGCHC 2 cut(s) 303, 378
BspACI CCGC 1 cut(s) 414
BspANI GGCC 1 cut(s) 301
BspCNI CTCAG 1 cut(s) 238
BspLI GGNNCC 1 cut(s) 301
BsrI ACTGG 1 cut(s) 350
BssECI CCNNGG 2 cut(s) 302, 303
Bst2UI CCWGG 1 cut(s) 304
Bst4CI ACNGT 2 cut(s) 94, 367
BstC8I GCNNGC 1 cut(s) 412
BstDEI CTNAG 4 cut(s) 116, 222, 246, 273
BstF5I GGATG 3 cut(s) 103, 196, 231
BstNI CCWGG 1 cut(s) 304
BstNSI RCATGY 1 cut(s) 414
BstSCI CCNGG 1 cut(s) 302
BstSLI GKGCMC 1 cut(s) 303
BstV2I GAAGAC 1 cut(s) 438
BsuRI GGCC 1 cut(s) 301
BtsCI GGATG 3 cut(s) 103, 196, 231
BtsIMutI CAGTG 4 cut(s) 99, 333, 357, 372
Cac8I GCNNGC 1 cut(s) 412
Cfr13I GGNCC 2 cut(s) 299, 300
Csp6I GTAC 1 cut(s) 61
CviAII CATG 1 cut(s) 411
CviJI RGCY 6 cut(s) 83, 151, 245, 270, 301, 376
CviKI_1 RGCY 6 cut(s) 83, 151, 245, 270, 301, 376
CviQI GTAC 1 cut(s) 61
DdeI CTNAG 4 cut(s) 116, 222, 246, 273
Eco24I GRGCYC 2 cut(s) 303, 378
Eco32I GATATC 1 cut(s) 103
Eco57I CTGAAG 2 cut(s) 131, 206
EcoO109I RGGNCCY 2 cut(s) 299, 300
EcoRII CCWGG 1 cut(s) 302
EcoRV GATATC 1 cut(s) 103
EcoT38I GRGCYC 2 cut(s) 303, 378
FaeI CATG 1 cut(s) 414
FaiI YATR 4 cut(s) 29, 240, 242, 412
FalI AAGNNNNNCTT 4 cut(s) 99, 131, 147, 179
FatI CATG 1 cut(s) 410
FauI CCCGC 1 cut(s) 407
FblI GTMKAC 2 cut(s) 139, 207
FokI GGATG 3 cut(s) 110, 203, 218
FriOI GRGCYC 2 cut(s) 303, 378
HaeIII GGCC 1 cut(s) 301
Hin1II CATG 1 cut(s) 414
HincII GTYRAC 1 cut(s) 208
HindII GTYRAC 1 cut(s) 208
HinfI GANTC 3 cut(s) 158, 175, 404
Hpy166II GTNNAC 4 cut(s) 140, 169, 208, 370
Hpy188III TCNNGA 1 cut(s) 179
Hpy8I GTNNAC 4 cut(s) 140, 169, 208, 370
HpyAV CCTTC 5 cut(s) 115, 155, 181, 290, 412
HpyCH4III ACNGT 2 cut(s) 94, 367
HpyF3I CTNAG 4 cut(s) 116, 222, 246, 273
Hsp92II CATG 1 cut(s) 414
LpnPI CCDG 4 cut(s) 212, 289, 316, 363
MboII GAAGA 2 cut(s) 209, 443
MhlI GDGCHC 2 cut(s) 303, 378
MluCI AATT 1 cut(s) 38
MlyI GAGTC 1 cut(s) 413
MnlI CCTC 2 cut(s) 68, 243
MseI TTAA 2 cut(s) 362, 399
MspR9I CCNGG 1 cut(s) 304
Mva1269I GAATGC 1 cut(s) 232
MvaI CCWGG 1 cut(s) 304
NlaIII CATG 1 cut(s) 414
NlaIV GGNNCC 1 cut(s) 301
NspI RCATGY 1 cut(s) 414
PaeI GCATGC 1 cut(s) 414
PasI CCCWGGG 1 cut(s) 303
PctI GAATGC 1 cut(s) 232
PfeI GAWTC 2 cut(s) 158, 175
PleI GAGTC 1 cut(s) 412
PpsI GAGTC 1 cut(s) 412
Psp6I CCWGG 1 cut(s) 302
PspGI CCWGG 1 cut(s) 302
PspN4I GGNNCC 1 cut(s) 301
PspOMI GGGCCC 1 cut(s) 299
PspPI GGNCC 2 cut(s) 299, 300
RsaI GTAC 1 cut(s) 62
RsaNI GTAC 1 cut(s) 61
SalI GTCGAC 1 cut(s) 206
SaqAI TTAA 2 cut(s) 362, 399
Sau96I GGNCC 2 cut(s) 299, 300
SchI GAGTC 1 cut(s) 413
ScrFI CCNGG 1 cut(s) 304
SduI GDGCHC 2 cut(s) 303, 378
SetI ASST 6 cut(s) 79, 85, 147, 201, 247, 282
SphI GCATGC 1 cut(s) 414
Sse9I AATT 1 cut(s) 38
SsiI CCGC 1 cut(s) 414
StyD4I CCNGG 1 cut(s) 302
TaaI ACNGT 2 cut(s) 94, 367
TaqI TCGA 3 cut(s) 178, 207, 346
TasI AATT 1 cut(s) 38
TfiI GAWTC 2 cut(s) 158, 175
Tru1I TTAA 2 cut(s) 362, 399
Tru9I TTAA 2 cut(s) 362, 399
TscAI CASTG 4 cut(s) 99, 333, 357, 372
TspDTI ATGAA 3 cut(s) 22, 102, 309
TspGWI ACGGA 1 cut(s) 252
TspRI CASTG 4 cut(s) 99, 333, 357, 372
XceI RCATGY 1 cut(s) 414
XmiI GTMKAC 2 cut(s) 139, 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.