DNA polymerase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G32700 |
| fragaria_vesca | FvH4_2g36240 FvH4_2g36240 |
| malus_domestica | MD08G1120000.v1.1 |
| prunus_persica | Prupe.1G453900_v2.0.a1 Prupe.1G453900_v2.0.a1 |
| pyrus_communis | pycom15g09100 |
| rosa_chinensis | RchiOBHm_Chr6g0305641 |
| rosa_laevigata | RLG00000010870 |
| rosa_multiflora | Rmu_sc0001809.1_g000026 |
| rosa_roxburghii | Rroxscaffold_7G00162490 |
| rosa_rugosa | Rorug06G0342400 Rorug06G0342500 |
| rosa_samantha | Rh6AG454300 Rh6BG447200 Rh6CG468000 Rh6DG454800 |
| rosa_wichuraiana | Rw6G039610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 323 |
| Acc36I | ACCTGC | 1 cut(s) | 235 |
| AccIII | TCCGGA | 1 cut(s) | 268 |
| AcoI | YGGCCR | 1 cut(s) | 175 |
| AfaI | GTAC | 1 cut(s) | 296 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 97 |
| AgsI | TTSAA | 1 cut(s) | 248 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 113 |
| AluBI | AGCT | 2 cut(s) | 138, 332 |
| AluI | AGCT | 2 cut(s) | 138, 332 |
| Aor13HI | TCCGGA | 1 cut(s) | 268 |
| AoxI | GGCC | 1 cut(s) | 175 |
| AsuC2I | CCSGG | 1 cut(s) | 92 |
| BbsI | GAAGAC | 1 cut(s) | 246 |
| BccI | CCATC | 2 cut(s) | 138, 185 |
| BceAI | ACGGC | 2 cut(s) | 162, 308 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 85, 119 |
| BcnI | CCSGG | 1 cut(s) | 92 |
| BfaI | CTAG | 3 cut(s) | 36, 50, 240 |
| BfmI | CTRYAG | 1 cut(s) | 274 |
| BfuAI | ACCTGC | 1 cut(s) | 235 |
| BlpI | GCTNAGC | 1 cut(s) | 353 |
| Bme1390I | CCNGG | 1 cut(s) | 92 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 113 |
| BmrFI | CCNGG | 1 cut(s) | 92 |
| BpiI | GAAGAC | 1 cut(s) | 246 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 180, 212 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 353 |
| BpuEI | CTTGAG | 1 cut(s) | 160 |
| BpuMI | CCSGG | 1 cut(s) | 92 |
| BsaWI | WCCGGW | 2 cut(s) | 112, 268 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 97 |
| BseAI | TCCGGA | 1 cut(s) | 268 |
| BseGI | GGATG | 1 cut(s) | 126 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 97 |
| BseMII | CTCAG | 1 cut(s) | 344 |
| BshFI | GGCC | 1 cut(s) | 177 |
| BsiSI | CCGG | 3 cut(s) | 92, 113, 269 |
| BslFI | GGGAC | 1 cut(s) | 30 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 97 |
| BsmFI | GGGAC | 1 cut(s) | 30 |
| BsnI | GGCC | 1 cut(s) | 177 |
| Bsp13I | TCCGGA | 1 cut(s) | 268 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 353 |
| BspANI | GGCC | 1 cut(s) | 177 |
| BspCNI | CTCAG | 1 cut(s) | 345 |
| BspEI | TCCGGA | 1 cut(s) | 268 |
| BspMAI | CTGCAG | 1 cut(s) | 278 |
| BspMI | ACCTGC | 1 cut(s) | 235 |
| BstDEI | CTNAG | 3 cut(s) | 41, 353, 376 |
| BstF5I | GGATG | 1 cut(s) | 126 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 329 |
| BstNSI | RCATGY | 1 cut(s) | 238 |
| BstSCI | CCNGG | 1 cut(s) | 90 |
| BstSFI | CTRYAG | 1 cut(s) | 274 |
| BstV2I | GAAGAC | 1 cut(s) | 246 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 173 |
| BsuRI | GGCC | 1 cut(s) | 177 |
| BtsCI | GGATG | 1 cut(s) | 126 |
| BveI | ACCTGC | 1 cut(s) | 235 |
| Csp6I | GTAC | 1 cut(s) | 295 |
| CviAII | CATG | 1 cut(s) | 235 |
| CviJI | RGCY | 6 cut(s) | 48, 87, 138, 177, 332, 357 |
| CviKI_1 | RGCY | 6 cut(s) | 48, 87, 138, 177, 332, 357 |
| CviQI | GTAC | 1 cut(s) | 295 |
| DdeI | CTNAG | 3 cut(s) | 41, 353, 376 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 323 |
| DriI | GACNNNNNGTC | 1 cut(s) | 113 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 323 |
| EaeI | YGGCCR | 1 cut(s) | 175 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 113 |
| FaeI | CATG | 1 cut(s) | 238 |
| FaiI | YATR | 4 cut(s) | 160, 236, 260, 287 |
| FaqI | GGGAC | 1 cut(s) | 30 |
| FatI | CATG | 1 cut(s) | 234 |
| FokI | GGATG | 1 cut(s) | 113 |
| FspBI | CTAG | 3 cut(s) | 36, 50, 240 |
| HaeIII | GGCC | 1 cut(s) | 177 |
| HapII | CCGG | 3 cut(s) | 92, 113, 269 |
| Hin1II | CATG | 1 cut(s) | 238 |
| HinfI | GANTC | 1 cut(s) | 195 |
| HpaII | CCGG | 3 cut(s) | 92, 113, 269 |
| Hpy188I | TCNGA | 2 cut(s) | 78, 379 |
| Hpy188III | TCNNGA | 2 cut(s) | 188, 269 |
| Hpy99I | CGWCG | 2 cut(s) | 100, 329 |
| HpyAV | CCTTC | 1 cut(s) | 210 |
| HpyCH4V | TGCA | 3 cut(s) | 70, 276, 371 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 329 |
| HpyF3I | CTNAG | 3 cut(s) | 41, 353, 376 |
| Hsp92II | CATG | 1 cut(s) | 238 |
| Kpn2I | TCCGGA | 1 cut(s) | 268 |
| LpnPI | CCDG | 7 cut(s) | 103, 105, 126, 168, 240, 282, 349 |
| MaeI | CTAG | 3 cut(s) | 36, 50, 240 |
| MboII | GAAGA | 1 cut(s) | 246 |
| MlyI | GAGTC | 1 cut(s) | 189 |
| MmeI | TCCRAC | 1 cut(s) | 56 |
| MnlI | CCTC | 1 cut(s) | 51 |
| MroI | TCCGGA | 1 cut(s) | 268 |
| MspI | CCGG | 3 cut(s) | 92, 113, 269 |
| MspR9I | CCNGG | 1 cut(s) | 92 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 329 |
| NciI | CCSGG | 1 cut(s) | 92 |
| NlaIII | CATG | 1 cut(s) | 238 |
| NspI | RCATGY | 1 cut(s) | 238 |
| PleI | GAGTC | 1 cut(s) | 189 |
| PpsI | GAGTC | 1 cut(s) | 189 |
| PstI | CTGCAG | 1 cut(s) | 278 |
| RsaI | GTAC | 1 cut(s) | 296 |
| RsaNI | GTAC | 1 cut(s) | 295 |
| SchI | GAGTC | 1 cut(s) | 189 |
| ScrFI | CCNGG | 1 cut(s) | 92 |
| SetI | ASST | 6 cut(s) | 76, 122, 140, 229, 284, 334 |
| SfcI | CTRYAG | 1 cut(s) | 274 |
| SmlI | CTYRAG | 1 cut(s) | 139 |
| SmoI | CTYRAG | 1 cut(s) | 139 |
| SspMI | CTAG | 3 cut(s) | 36, 50, 240 |
| StyD4I | CCNGG | 1 cut(s) | 90 |
| TaqI | TCGA | 2 cut(s) | 9, 187 |
| TspDTI | ATGAA | 1 cut(s) | 275 |
| TspGWI | ACGGA | 1 cut(s) | 113 |
| XceI | RCATGY | 1 cut(s) | 238 |
| XspI | CTAG | 3 cut(s) | 36, 50, 240 |