Rorug06G0441300

Protein of unknown function (DUF3675)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0004910
Physical Location & Seq
Forward (+)
57379595 .. 57383206
3612 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0441300.1

Sequence Viewer

Length: 2076 bp
ATGCTTCTTCTGCCTCTGCCTGGTTCCACCCGATTCCCATCCGTTCAATTATCTTCGTCTCCGATACTCATCCGCCACCACCACATCTTCCACGCGCCTCCCTCCGCCCTTTCCACTTCCGCCGAATCTCATCTCCCCCCAATTTCATCCTCACGACGTCGTTTGGATAACTACGACACCCACCAGGCCGCCGTTTCCCGCTACGACTTCGCACCCCTCCTCGCCTTCCTCTCCACCTCGTCCAGCTCCACTCATGACGACATTAACTCGGCGTCGCCGACGTCACTCGACCCGGCCGAGTTCCAGCTGGCCGAGTCGTACCGGGCCGTCCCGGCCCCTCTCTGGCACTCCCTCCTCAAATCCCTCTGCTCCTCCTCCTCCTCCTTGAAACAGGCCTACGCGCTCGTTTCGTGGCTCCAGAAGCACAACCTCTGCTTCTCCTATGAGCTCCTCTACTCCATCCTCATCCACGCGCTCGGACGCTCCGAGAAGCTCTACGAGGCGTTCCTGCTCTCTCAGCGGCAGACGTTGACTCCGTTGACCTACAACGCTCTCATCGGCGCGTGCGCTCGCAACGGCGACCTGGAGAAGGCGCTCAATTTGATGTCCAGGATGCGCCAGGACGGTTACCGATCGGATTTCGTGAACTACAGCCTGGTAATTCAGTCGCTTAATCGCTCAAACAAGGTTGATTCTCCGATTATGTTAAAGCTTTACAGGGAGATTGAGTCTGAGAATGTTGAGATTGATGGACAGCTGCTAAATGATTTGATTGTTGGTTTCGCAAAAGCCGGCGAGCCCAGCCAGGCTATGCATTTTCTTGCCATGGTGCAGGCTAGTGGTTTGAGCCCCAAAACCGCCTCTCTGGTGGCGGTTATTTCGGCTTTGGGGAACTCCGGTAGGGTGGTTGAGGCGGAAGCTATTTTCGAGGAAATGAAAGAGGGTGGGTTGCAACCAAGGACTAGAGCTTACAATGCACTGCTTAAAGGGTATGTGAAGGCAGCTTCTTTGGAAGATGCTGAATCCATTGTGTCACAGATGGAGAGGAGTGGCATTTCACCGGATGAGCACACTTATAGCCTCCTCATTGATGCTTATGCCAATGCCGGTAGGTGGGAGAGCGCGAGAATTGTGTTGAAGGAGATGGAGGCTAGCAATGTGCAGCCTAATTCGTATGTTTTCAGTAGGATTTTAGCTAGTTATCGGGATAGAGGGGAGTGGCAGAAGTCATTTCAAGTTTTGAGGGAGATGAGGAGCAGTGGGGTAATGCCTGATAGGCATTTTTACAATGTGATGATTGATACTTTTGGAAAGTCTAATTGTCTTGATCATGCTATGGCTACCTTTGAAAGGATGCTATCGGAGGGGATTCAGCCGGATACTGTTACCTGGAATACCCTCATAGATAGTCATTGTAAGTCAGGCCACCATGTAAGGGCAGAGGAGTTGTTTGAGGAAATGCAGGAGAGTGGTTGCGCGCCTTGTGCCACCACCTTTAACATCATGATAAACTCCTTAGGGGAGCAGGAGAGATGGGATGAAGTGAAGGGCCTAATGGGGAAGATGCAGAGTCAGGGTTTACTTCCGAATATAGTTACTTATACCACATTAGTTGACATATATGGGAAGTCGGGGAGATTTAATGATGCAATAGAGTGCTTGGAGATAATGAAGTCTGCAGGCATGAAACCATCCCCGACAATGTATAATGCCTTGATTAATGCCTATGCTCAAAGGGGTTTGTCTGAGCAAGCACTGAATGCATTCAGGGTTATGAGATCAGACGGCTTGAAACCTAGTCTATTAGCTCTCAATTCATTAATTAATGCATTTGGCGAGGATAGGAGGGATGCTGAGGCCTTTTCCGTGTTGCAGTACATGAAGGACAATGATGTAAAACCAGACGTGGTTACATATACTACACTTATGAAAGCCCTTATTCGAGTCGATAAATTTTATAAGGTTCCAGATGTGTATGAAGAAATGATCCACTCTAGGGTTACTCCTGATAGGAAAGCTAGGGCAATGTTACGGTCTGCCCTGAAATACATGAAACAGACACTGAATCATAGATGA

Protein Analysis

691

Amino Acids

77.35

Weight (kDa)

6.57

Isoelectric Point (pI)

51.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 181 - 224 1.1e-07 PPR repeat family
PPR PF01535 181 - 209 4.4e-08 PPR repeat
PPR_long PF17177 230 - 371 2.1e-12 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 308 - 368 2.9e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 321 - 368 6.2e-13 PPR repeat family
TPR_24 PF23276 341 - 451 3.4e-11 Fungal tetratrico peptide repeats
PPR_long PF17177 343 - 426 7.1e-10 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 351 - 383 4.3e-06 PPR repeat
PPR_3 PF13812 378 - 438 2.5e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 429 - 463 3.4e-06 PPR repeat family
PPR_long PF17177 430 - 584 7.7e-10 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 450 - 508 3.8e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 456 - 488 1.1e-11 PPR repeat
PPR_2 PF13041 459 - 506 2.6e-16 PPR repeat family
PPR PF01535 462 - 492 2.7e-10 PPR repeat
PPR_2 PF13041 494 - 539 1.8e-09 PPR repeat family
PPR_3 PF13812 519 - 578 1.7e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 526 - 558 1.7e-07 PPR repeat
PPR_2 PF13041 529 - 565 7.1e-08 PPR repeat family
PPR PF01535 532 - 561 4.9e-06 PPR repeat
PPR_3 PF13812 561 - 613 2.5e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 567 - 611 1.2e-07 PPR repeat family
PPR PF01535 568 - 597 8.8e-06 PPR repeat
TPR_24 PF23276 569 - 661 2.5e-08 Fungal tetratrico peptide repeats
PPR_2 PF13041 600 - 647 9.4e-11 PPR repeat family
PPR_2 PF13041 634 - 671 3.8e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1959
AatII GACGTC 2 cut(s) 160, 284
AccII CGCG 6 cut(s) 95, 401, 473, 563, 1124, 1478
AciI CCGC 9 cut(s) 73, 105, 120, 189, 199, 520, 858, 872, 914
AclWI GGATC 1 cut(s) 1981
AcoI YGGCCR 2 cut(s) 294, 309
AcsI RAATTY 1 cut(s) 1952
AcyI GRCGYC 3 cut(s) 157, 272, 281
AfaI GTAC 2 cut(s) 320, 1877
AfiI CCNNNNNNNGG 7 cut(s) 20, 342, 589, 1113, 1350, 1435, 1996
AgsI TTSAA 6 cut(s) 47, 388, 1138, 1235, 1349, 1792
AjiI CACGTC 1 cut(s) 1906
AjnI CCWGG 8 cut(s) 19, 183, 582, 608, 618, 654, 804, 1388
Alw21I GWGCWC 2 cut(s) 450, 1071
Alw26I GTCTC 1 cut(s) 63
AlwI GGATC 1 cut(s) 1981
AlwNI CAGNNNCTG 1 cut(s) 2062
AoxI GGCC 9 cut(s) 186, 294, 309, 324, 333, 393, 1423, 1549, 1857
ApeKI GCWGC 3 cut(s) 757, 1001, 1162
ApoI RAATTY 1 cut(s) 1952
AseI ATTAAT 3 cut(s) 1719, 1820, 1824
Asp700I GAANNNNTTC 1 cut(s) 1763
AspS9I GGNCC 3 cut(s) 324, 334, 1549
AsuC2I CCSGG 3 cut(s) 293, 323, 332
AsuHPI GGTGA 1 cut(s) 1050
AsuNHI GCTAGC 1 cut(s) 1151
AxyI CCTNAGG 1 cut(s) 1516
BanII GRGCYC 3 cut(s) 450, 801, 851
Bbv12I GWGCWC 2 cut(s) 450, 1071
BbvCI CCTCAGC 1 cut(s) 1854
BbvI GCAGC 3 cut(s) 744, 1013, 1174
BccI CCATC 7 cut(s) 46, 467, 743, 1033, 1138, 1527, 1699
BceAI ACGGC 4 cut(s) 176, 311, 592, 1801
BciT130I CCWGG 8 cut(s) 21, 185, 584, 610, 620, 656, 806, 1390
BciVI GTATCC 1 cut(s) 1372
BclI TGATCA 1 cut(s) 1327
BcnI CCSGG 3 cut(s) 293, 323, 332
BcoDI GTCTC 1 cut(s) 63
BfaI CTAG 7 cut(s) 837, 963, 1152, 1197, 1797, 1995, 2019
BfmI CTRYAG 2 cut(s) 649, 1677
BfoI RGCGCY 1 cut(s) 596
BfuI GTATCC 1 cut(s) 1372
BglI GCCNNNNNGGC 2 cut(s) 332, 1276
BisI GCNGC 5 cut(s) 189, 521, 758, 1002, 1163
BlsI GCNGC 5 cut(s) 190, 522, 759, 1003, 1164
BmgBI CACGTC 1 cut(s) 1906
BmgT120I GGNCC 3 cut(s) 324, 334, 1549
BmiI GGNNCC 4 cut(s) 25, 336, 416, 1965
BmsI GCATC 7 cut(s) 603, 1006, 1081, 1344, 1554, 1636, 1840
BmtI GCTAGC 1 cut(s) 1155
BpmI CTGGAG 2 cut(s) 401, 605
Bpu10I CCTNAGC 1 cut(s) 1854
BpuMI CCSGG 3 cut(s) 293, 323, 332
BsaBI GATNNNNATC 2 cut(s) 37, 68
BsaHI GRCGYC 3 cut(s) 157, 272, 281
BsaJI CCNNGG 2 cut(s) 825, 956
BsaWI WCCGGW 2 cut(s) 896, 1060
BsaXI ACNNNNNCTCC 4 cut(s) 517, 547, 713, 743
Bsc4I CCNNNNNNNGG 7 cut(s) 20, 342, 589, 1113, 1350, 1435, 1996
Bse118I RCCGGY 2 cut(s) 791, 1106
Bse21I CCTNAGG 1 cut(s) 1516
Bse3DI GCAATG 2 cut(s) 1162, 2031
Bse8I GATNNNNATC 2 cut(s) 37, 68
BseBI CCWGG 8 cut(s) 21, 185, 584, 610, 620, 656, 806, 1390
BseDI CCNNGG 2 cut(s) 825, 956
BseJI GATNNNNATC 2 cut(s) 37, 68
BseLI CCNNNNNNNGG 7 cut(s) 20, 342, 589, 1113, 1350, 1435, 1996
BseMI GCAATG 2 cut(s) 1162, 2031
BseMII CTCAG 4 cut(s) 530, 723, 1737, 1845
BsePI GCGCGC 1 cut(s) 1476
BseX3I CGGCCG 1 cut(s) 294
BseXI GCAGC 3 cut(s) 744, 1013, 1174
BseYI CCCAGC 1 cut(s) 800
BsgI GTGCAG 2 cut(s) 851, 1181
Bsh1236I CGCG 6 cut(s) 95, 401, 473, 563, 1124, 1478
Bsh1285I CGRYCG 2 cut(s) 297, 635
BshFI GGCC 9 cut(s) 188, 296, 311, 326, 335, 395, 1425, 1551, 1859
BsiEI CGRYCG 2 cut(s) 297, 635
BsiHKAI GWGCWC 2 cut(s) 450, 1071
BsiSI CCGG 8 cut(s) 293, 322, 332, 792, 897, 1061, 1107, 1376
BslFI GGGAC 1 cut(s) 314
BslI CCNNNNNNNGG 7 cut(s) 20, 342, 589, 1113, 1350, 1435, 1996
BsmAI GTCTC 1 cut(s) 63
BsmBI CGTCTC 1 cut(s) 63
BsmFI GGGAC 1 cut(s) 314
BsmI GAATGC 2 cut(s) 1763, 1765
BsnI GGCC 9 cut(s) 188, 296, 311, 326, 335, 395, 1425, 1551, 1859
Bsp1286I GDGCHC 4 cut(s) 450, 801, 851, 1071
Bsp143I GATC 4 cut(s) 632, 1327, 1778, 1986
Bsp19I CCATGG 1 cut(s) 825
BspACI CCGC 9 cut(s) 73, 105, 120, 189, 199, 520, 858, 872, 914
BspANI GGCC 9 cut(s) 188, 296, 311, 326, 335, 395, 1425, 1551, 1859
BspCNI CTCAG 4 cut(s) 529, 724, 1738, 1846
BspFNI CGCG 6 cut(s) 95, 401, 473, 563, 1124, 1478
BspHI TCATGA 2 cut(s) 253, 1503
BspLI GGNNCC 4 cut(s) 25, 336, 416, 1965
BspMAI CTGCAG 1 cut(s) 1681
BspOI GCTAGC 1 cut(s) 1155
BspPI GGATC 1 cut(s) 1981
BsrDI GCAATG 2 cut(s) 1162, 2031
BsrFI RCCGGY 2 cut(s) 791, 1106
BssAI RCCGGY 2 cut(s) 791, 1106
BssECI CCNNGG 2 cut(s) 825, 956
BssHII GCGCGC 1 cut(s) 1476
BssMI GATC 4 cut(s) 632, 1327, 1778, 1986
BssNI GRCGYC 3 cut(s) 157, 272, 281
BssT1I CCWWGG 2 cut(s) 825, 956
Bst2UI CCWGG 8 cut(s) 21, 185, 584, 610, 620, 656, 806, 1390
Bst4CI ACNGT 3 cut(s) 626, 1384, 2034
BstACI GRCGYC 3 cut(s) 157, 272, 281
BstAPI GCANNNNNTGC 1 cut(s) 1760
BstDEI CTNAG 5 cut(s) 516, 732, 1516, 1746, 1854
BstDSI CCRYGG 1 cut(s) 825
BstEII GGTNACC 1 cut(s) 626
BstENI CCTNNNNNAGG 2 cut(s) 587, 1348
BstFNI CGCG 6 cut(s) 95, 401, 473, 563, 1124, 1478
BstH2I RGCGCY 1 cut(s) 596
BstKTI GATC 4 cut(s) 635, 1330, 1781, 1989
BstMAI GTCTC 1 cut(s) 63
BstMBI GATC 4 cut(s) 632, 1327, 1778, 1986
BstMCI CGRYCG 2 cut(s) 297, 635
BstMWI GCNNNNNNNGC 9 cut(s) 10, 332, 421, 517, 801, 974, 1276, 1484, 1760
BstNI CCWGG 8 cut(s) 21, 185, 584, 610, 620, 656, 806, 1390
BstPI GGTNACC 1 cut(s) 626
BstSFI CTRYAG 2 cut(s) 649, 1677
BstUI CGCG 6 cut(s) 95, 401, 473, 563, 1124, 1478
BstV1I GCAGC 3 cut(s) 744, 1013, 1174
BstZI CGGCCG 1 cut(s) 294
Bsu36I CCTNAGG 1 cut(s) 1516
BsuI GTATCC 1 cut(s) 1372
BsuRI GGCC 9 cut(s) 188, 296, 311, 326, 335, 395, 1425, 1551, 1859
BtgI CCRYGG 1 cut(s) 825
BtrI CACGTC 1 cut(s) 1906
BtsI GCAGTG 2 cut(s) 977, 1264
BtsIMutI CAGTG 4 cut(s) 977, 1264, 1754, 2060
CaiI CAGNNNCTG 1 cut(s) 2062
CciI TCATGA 2 cut(s) 253, 1503
Cfr10I RCCGGY 2 cut(s) 791, 1106
Cfr13I GGNCC 3 cut(s) 324, 334, 1549
CseI GACGC 2 cut(s) 261, 489
Csp6I GTAC 2 cut(s) 319, 1876
CspCI CAANNNNNGTGG 2 cut(s) 1594, 1629
CviAII CATG 8 cut(s) 254, 826, 1331, 1430, 1504, 1684, 1879, 2050
CviQI GTAC 2 cut(s) 319, 1876
DdeI CTNAG 5 cut(s) 516, 732, 1516, 1746, 1854
DpnI GATC 4 cut(s) 634, 1329, 1780, 1988
DpnII GATC 4 cut(s) 632, 1327, 1778, 1986
EaeI YGGCCR 2 cut(s) 294, 309
EagI CGGCCG 1 cut(s) 294
EciI GGCGGA 4 cut(s) 62, 94, 109, 929
Ecl136II GAGCTC 1 cut(s) 448
EclXI CGGCCG 1 cut(s) 294
Eco130I CCWWGG 2 cut(s) 825, 956
Eco147I AGGCCT 2 cut(s) 395, 1859
Eco24I GRGCYC 3 cut(s) 450, 801, 851
Eco52I CGGCCG 1 cut(s) 294
Eco53kI GAGCTC 1 cut(s) 448
Eco81I CCTNAGG 1 cut(s) 1516
Eco91I GGTNACC 1 cut(s) 626
EcoICRI GAGCTC 1 cut(s) 448
EcoNI CCTNNNNNAGG 2 cut(s) 587, 1348
EcoO109I RGGNCCY 1 cut(s) 1549
EcoO65I GGTNACC 1 cut(s) 626
EcoRII CCWGG 8 cut(s) 19, 183, 582, 608, 618, 654, 804, 1388
EcoT14I CCWWGG 2 cut(s) 825, 956
EcoT22I ATGCAT 3 cut(s) 816, 1765, 1831
EcoT38I GRGCYC 3 cut(s) 450, 801, 851
ErhI CCWWGG 2 cut(s) 825, 956
Esp3I CGTCTC 1 cut(s) 63
FaeI CATG 8 cut(s) 257, 829, 1334, 1433, 1507, 1687, 1882, 2053
FaqI GGGAC 1 cut(s) 314
FatI CATG 8 cut(s) 253, 825, 1330, 1429, 1503, 1683, 1878, 2049
FauI CCCGC 1 cut(s) 206
FbaI TGATCA 1 cut(s) 1327
Fnu4HI GCNGC 5 cut(s) 189, 521, 758, 1002, 1163
FriOI GRGCYC 3 cut(s) 450, 801, 851
Fsp4HI GCNGC 5 cut(s) 189, 521, 758, 1002, 1163
FspBI CTAG 7 cut(s) 837, 963, 1152, 1197, 1797, 1995, 2019
GluI GCNGC 5 cut(s) 189, 521, 758, 1002, 1163
GsaI CCCAGC 1 cut(s) 804
GsuI CTGGAG 2 cut(s) 401, 605
HaeII RGCGCY 1 cut(s) 596
HaeIII GGCC 9 cut(s) 188, 296, 311, 326, 335, 395, 1425, 1551, 1859
HapII CCGG 8 cut(s) 293, 322, 332, 792, 897, 1061, 1107, 1376
HgaI GACGC 2 cut(s) 261, 489
Hin1I GRCGYC 3 cut(s) 157, 272, 281
Hin1II CATG 8 cut(s) 257, 829, 1334, 1433, 1507, 1687, 1882, 2053
HincII GTYRAC 3 cut(s) 531, 540, 1615
HindII GTYRAC 3 cut(s) 531, 540, 1615
HindIII AAGCTT 1 cut(s) 710
HpaII CCGG 8 cut(s) 293, 322, 332, 792, 897, 1061, 1107, 1376
HphI GGTGA 1 cut(s) 1050
Hpy166II GTNNAC 5 cut(s) 531, 540, 646, 1580, 1615
Hpy188III TCNNGA 9 cut(s) 153, 254, 418, 643, 1205, 1325, 1504, 1967, 2006
Hpy8I GTNNAC 5 cut(s) 531, 540, 646, 1580, 1615
Hpy99I CGWCG 4 cut(s) 159, 162, 277, 283
HpyAV CCTTC 6 cut(s) 235, 583, 991, 1132, 1540, 1876
HpyCH4III ACNGT 3 cut(s) 626, 1384, 2034
HpyCH4IV ACGT 4 cut(s) 157, 281, 527, 1905
HpyF10VI GCNNNNNNNGC 9 cut(s) 10, 332, 421, 517, 801, 974, 1276, 1484, 1760
HpyF3I CTNAG 5 cut(s) 516, 732, 1516, 1746, 1854
HpySE526I ACGT 4 cut(s) 157, 281, 527, 1905
Hsp92I GRCGYC 3 cut(s) 157, 272, 281
Hsp92II CATG 8 cut(s) 257, 829, 1334, 1433, 1507, 1687, 1882, 2053
KroI GCCGGC 1 cut(s) 791
KroNI GCCGGC 1 cut(s) 793
Ksp22I TGATCA 1 cut(s) 1327
Kzo9I GATC 4 cut(s) 632, 1327, 1778, 1986
LmnI GCTCC 7 cut(s) 251, 374, 420, 453, 488, 1254, 1522
Lsp1109I GCAGC 3 cut(s) 744, 1013, 1174
LweI GCATC 7 cut(s) 603, 1006, 1081, 1344, 1554, 1636, 1840
MaeI CTAG 7 cut(s) 837, 963, 1152, 1197, 1797, 1995, 2019
MaeII ACGT 4 cut(s) 157, 281, 527, 1905
MaeIII GTNAC 8 cut(s) 282, 626, 1032, 1384, 1594, 1909, 1999, 2028
MalI GATC 4 cut(s) 634, 1329, 1780, 1988
MboI GATC 4 cut(s) 632, 1327, 1778, 1986
MboII GAAGA 5 cut(s) 45, 79, 1025, 1573, 1991
MhlI GDGCHC 4 cut(s) 450, 801, 851, 1071
MlyI GAGTC 5 cut(s) 323, 526, 737, 1579, 1953
Mph1103I ATGCAT 3 cut(s) 816, 1765, 1831
MroNI GCCGGC 1 cut(s) 791
MroXI GAANNNNTTC 1 cut(s) 1763
MseI TTAA 9 cut(s) 264, 672, 707, 984, 1497, 1641, 1719, 1820, 1824
MspA1I CMGCKG 3 cut(s) 307, 520, 757
MspI CCGG 8 cut(s) 293, 322, 332, 792, 897, 1061, 1107, 1376
Mva1269I GAATGC 2 cut(s) 1763, 1765
MvaI CCWGG 8 cut(s) 21, 185, 584, 610, 620, 656, 806, 1390
MvnI CGCG 6 cut(s) 95, 401, 473, 563, 1124, 1478
MwoI GCNNNNNNNGC 9 cut(s) 10, 332, 421, 517, 801, 974, 1276, 1484, 1760
NaeI GCCGGC 1 cut(s) 793
NciI CCSGG 3 cut(s) 293, 323, 332
NcoI CCATGG 1 cut(s) 825
NdeII GATC 4 cut(s) 632, 1327, 1778, 1986
NgoMIV GCCGGC 1 cut(s) 791
NheI GCTAGC 1 cut(s) 1151
NlaIII CATG 8 cut(s) 257, 829, 1334, 1433, 1507, 1687, 1882, 2053
NlaIV GGNNCC 4 cut(s) 25, 336, 416, 1965
NmeAIII GCCGAG 3 cut(s) 248, 322, 337
NmuCI GTSAC 2 cut(s) 282, 1032
NsiI ATGCAT 3 cut(s) 816, 1765, 1831
PacI TTAATTAA 1 cut(s) 1824
PagI TCATGA 2 cut(s) 253, 1503
PauI GCGCGC 1 cut(s) 1476
PceI AGGCCT 2 cut(s) 395, 1859
PcsI WCGNNNNNNNCGW 4 cut(s) 275, 294, 483, 533
PctI GAATGC 2 cut(s) 1763, 1765
PdiI GCCGGC 1 cut(s) 793
PdmI GAANNNNTTC 1 cut(s) 1763
PfeI GAWTC 6 cut(s) 33, 125, 692, 1022, 1369, 2065
PfoI TCCNGGA 1 cut(s) 608
PkrI GCNGC 5 cut(s) 190, 522, 759, 1003, 1164
Ple19I CGATCG 1 cut(s) 635
PleI GAGTC 5 cut(s) 322, 526, 736, 1578, 1952
PpsI GAGTC 5 cut(s) 322, 526, 736, 1578, 1952
PshBI ATTAAT 3 cut(s) 1719, 1820, 1824
PsiI TTATAA 1 cut(s) 1959
Psp124BI GAGCTC 1 cut(s) 450
Psp6I CCWGG 8 cut(s) 19, 183, 582, 608, 618, 654, 804, 1388
PspEI GGTNACC 1 cut(s) 626
PspFI CCCAGC 1 cut(s) 800
PspGI CCWGG 8 cut(s) 19, 183, 582, 608, 618, 654, 804, 1388
PspN4I GGNNCC 4 cut(s) 25, 336, 416, 1965
PspPI GGNCC 3 cut(s) 324, 334, 1549
PstI CTGCAG 1 cut(s) 1681
PstNI CAGNNNCTG 1 cut(s) 2062
PteI GCGCGC 1 cut(s) 1476
PvuI CGATCG 1 cut(s) 635
PvuII CAGCTG 2 cut(s) 307, 757
RsaI GTAC 2 cut(s) 320, 1877
RsaNI GTAC 2 cut(s) 319, 1876
SacI GAGCTC 1 cut(s) 450
SaqAI TTAA 9 cut(s) 264, 672, 707, 984, 1497, 1641, 1719, 1820, 1824
SatI GCNGC 5 cut(s) 189, 521, 758, 1002, 1163
Sau3AI GATC 4 cut(s) 632, 1327, 1778, 1986
Sau96I GGNCC 3 cut(s) 324, 334, 1549
SchI GAGTC 5 cut(s) 323, 526, 737, 1579, 1953
SduI GDGCHC 4 cut(s) 450, 801, 851, 1071
SfaNI GCATC 7 cut(s) 603, 1006, 1081, 1344, 1554, 1636, 1840
SfcI CTRYAG 2 cut(s) 649, 1677
SfiI GGCCNNNNNGGCC 1 cut(s) 332
SseBI AGGCCT 2 cut(s) 395, 1859
SsiI CCGC 9 cut(s) 73, 105, 120, 189, 199, 520, 858, 872, 914
SspMI CTAG 7 cut(s) 837, 963, 1152, 1197, 1797, 1995, 2019
SstI GAGCTC 1 cut(s) 450
StuI AGGCCT 2 cut(s) 395, 1859
StyI CCWWGG 2 cut(s) 825, 956
TaaI ACNGT 3 cut(s) 626, 1384, 2034
TaiI ACGT 4 cut(s) 160, 284, 530, 1908
TaqI TCGA 4 cut(s) 288, 927, 1942, 1947
TatI WGTACW 1 cut(s) 1875
TauI GCSGC 2 cut(s) 191, 523
TfiI GAWTC 6 cut(s) 33, 125, 692, 1022, 1369, 2065
Tru1I TTAA 9 cut(s) 264, 672, 707, 984, 1497, 1641, 1719, 1820, 1824
Tru9I TTAA 9 cut(s) 264, 672, 707, 984, 1497, 1641, 1719, 1820, 1824
TscAI CASTG 4 cut(s) 984, 1264, 1761, 2067
TseFI GTSAC 2 cut(s) 282, 1032
TseI GCWGC 3 cut(s) 757, 1001, 1162
Tsp45I GTSAC 2 cut(s) 282, 1032
TspGWI ACGGA 3 cut(s) 31, 525, 1855
TspRI CASTG 4 cut(s) 984, 1264, 1761, 2067
VspI ATTAAT 3 cut(s) 1719, 1820, 1824
XagI CCTNNNNNAGG 2 cut(s) 587, 1348
XapI RAATTY 1 cut(s) 1952
XmnI GAANNNNTTC 1 cut(s) 1763
XspI CTAG 7 cut(s) 837, 963, 1152, 1197, 1797, 1995, 2019
ZraI GACGTC 2 cut(s) 158, 282
Zsp2I ATGCAT 3 cut(s) 816, 1765, 1831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.