Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0013132

Physical Location & Seq

Genomic Coordinates Reverse (-)

62250096 .. 62254996

Gene Structure 4901 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0507800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGCCGATGCCTGGAATATTGCTGTCCGGACCACCAGGCTGTGGCAAGACTAAATTGGCTCATGCTATTGCCAATGAAACTAGCTATACCTTCCACAAGATTTCAGCCCCCTCACTCGTCTCCAGCTTCACAGGTGGATCTGAAGACATGATAAGAAGGCTGTTTCATAAAGCTCATCAGACTGCTCCGTCAGTTGTGTTTATTGATGAGATTGATGTGATTGCTTCCAAAAGAGAGGATTTAAAAGCAGCGGAGCAGAGGATTGTGGCACAACTTCTGACCTGCATGGACAACGTGAATTCAAAATCTGGCTGTGTTATTGTGATTGGAGCTACCAATAGGCCTGATGCCATTGACCCTGCTCTAAGGAGGCCAGGGCGTTTTGACCTTGAGTTTGTCTTAGGCGCTCCGGATGAAAAGGCCAGGTTCCACATTCTTTCTCTGCTTCTAAAACATCCAAGACTTGAAGGTTCGTTTGATCTTCATAAACTAGCCAGGGCTACATCAGGGTTTGTTGGAGCTGATTTGGAAACACTGGTCATCAAGGCTGTCAAGATTGCTGAGAATAGGATTGTAAACAACAACAAGGCTGATAGGTCTATATATGCGCCTGAAGAAATGAAAAACTACTCCATCTCTATGAATGATTTTGAGGAAGCAGTTCAAGCTATTCAGCCTTCTTTAAAAAGAGAAGGATTCAATGCAATTCCTGATGTGAAATTGGAGGATGTTGGTGGGCAGGATTCATTAAAGCAGGAATTTCTTGAATTTAAATACCCTTCATTCTATGAGGGAGACGACTTAGAGACAGGTGTTCTGCTCTACGGACCTCCAGGATGTGGTAAAACACTGATAGCAAAGGCCGTTGCTAATGAGGCTGGTGCTAGTTTCATTCACATTAAGGGCCCTGAACTTTTGAATAAATATGTTGGAGAAAGTGAGCTACAACTTCGGACAATATTTAGCCGTGCAAGGATGTGTTCGCCATGTATACTTTTCTTTGATGAGGTGGACTCTATAACAACTAATAAGGAGAGCGAAGGGTCATGGGTTGTTCAGCGGCTATTGAAGCAGTTTCTTATAGAATTTGATGGTGGAGAGAAGCGGCAAGGTGTATTTATAATTGGTGCCACTAATAGACCCGATCAAATGGACCCTGCTATGTTACGGTCCGGAAGGTTCGGTAAACAAATACTTGTTTCCCTGCCCGATAAAGACGAGCGTGGTTCAATCTTGAAAGCTCTTGCAAGGAAAAAACATATAGATCCCAGCGTAGATCTGTGTGAGATTGCACAAGGATGTGAAAACTTCAGTGGAGCTGATCTTGCTATGCTGATGAGTAGAGCTTCTAAGCTTTCTAAAGCTGAGACATTTGAGGAATTTATAGCAACTGGTGGGAGTTCAGATGCACCACCACCATCGATTATCAACAATATTCACTTTGAGCAAGCACGAGCTACAATCACACCATTATCCATCGAGAAAATTCGTTGGTACCAGACTTTTGGAGAGGAAGAACAAAAGACTCCCCGTGAACACTGTGTTAAAGGATTCATGGACTTCGCGGCACCAAGAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0004550 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006165 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0008152 GO:0009117 GO:0009132 GO:0009314 GO:0009411 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009636 GO:0009639 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009941 GO:0009987 GO:0010017 GO:0010033 GO:0010035 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0019205 GO:0019637 GO:0023052 GO:0031967 GO:0031975 GO:0032870 GO:0034641 GO:0042221 GO:0042493 GO:0042542 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046677 GO:0046939 GO:0050789 GO:0050794 GO:0050896 GO:0051606 GO:0051716 GO:0055086 GO:0065007 GO:0070887 GO:0071214 GO:0071310 GO:0071365 GO:0071478 GO:0071482 GO:0071489 GO:0071495 GO:0071704 GO:0104004 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko00983 ko01100 ko01110 ko01130 ko04016 map00230 map00240 map00983 map01100 map01110 map01130 map04016

Pfam Domains

Protein Families

NDK

Protein Analysis

526

Amino Acids

58.02

Weight (kDa)

5.97

Isoelectric Point (pI)

45.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RuvB_N	PF05496	5 - 81	1.2e-07	Holliday junction DNA helicase RuvB P-loop domain
AAA	PF00004	6 - 134	3.6e-41	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	159 - 193	1e-07	AAA+ lid domain
RuvB_N	PF05496	240 - 343	2.1e-06	Holliday junction DNA helicase RuvB P-loop domain
AAA	PF00004	272 - 401	2.8e-42	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	424 - 451	7e-06	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013132)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63310
fragaria_vesca	FvH4_5g07600
malus_domestica	MD06G1149000.v1.1 MD14G1162900.v1.1
prunus_persica	Prupe.5G156200_v2.0.a1 Prupe.5G156200_v2.0.a1
pyrus_communis	pycom06g13840 pycom14g13570
rosa_chinensis	RchiOBHm_Chr7g0190891
rosa_laevigata	RLG00000004488
rosa_multiflora	Rmu_sc0006903.1_g000004
rosa_roxburghii	Rroxscaffold_3G00264220
rosa_rugosa	Rorug06G0507800
rosa_samantha	Rh7AG114500 Rh7BG116900 Rh7CG120000 Rh7DG118300
rosa_wichuraiana	Rw7G009990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1121
AasI	GACNNNNNNGTC	1 cut(s)	187
Acc36I	ACCTGC	1 cut(s)	290
Acc65I	GGTACC	1 cut(s)	1494
AccB1I	GGYRCC	3 cut(s)	1127, 1494, 1567
AccB7I	CCANNNNNTGG	2 cut(s)	41, 839
AccI	GTMKAC	1 cut(s)	991
AccII	CGCG	1 cut(s)	1565
AccIII	TCCGGA	3 cut(s)	26, 409, 1172
AciI	CCGC	4 cut(s)	251, 1060, 1105, 1565
AclWI	GGATC	2 cut(s)	145, 1259
AcsI	RAATTY	6 cut(s)	298, 758, 767, 1085, 1379, 1485
AcuI	CTGAAG	3 cut(s)	162, 633, 1294
AfaI	GTAC	1 cut(s)	1496
AfiI	CCNNNNNNNGG	3 cut(s)	11, 41, 839
AgsI	TTSAA	9 cut(s)	303, 467, 665, 700, 767, 919, 1069, 1230, 1237
AjnI	CCWGG	6 cut(s)	10, 34, 373, 422, 494, 832
Alw26I	GTCTC	4 cut(s)	124, 789, 800, 1361
AlwI	GGATC	2 cut(s)	145, 1259
Aor13HI	TCCGGA	3 cut(s)	26, 409, 1172
AoxI	GGCC	5 cut(s)	341, 371, 420, 861, 904
ApaI	GGGCCC	1 cut(s)	908
ApeKI	GCWGC	1 cut(s)	248
ApoI	RAATTY	6 cut(s)	298, 758, 767, 1085, 1379, 1485
ArsI	GACNNNNNNTTYG	2 cut(s)	377, 409
Asp700I	GAANNNNTTC	1 cut(s)	660
Asp718I	GGTACC	1 cut(s)	1494
AspLEI	GCGC	2 cut(s)	407, 610
AspS9I	GGNCC	6 cut(s)	29, 827, 904, 905, 1153, 1170
AvaII	GGWCC	4 cut(s)	29, 827, 1153, 1170
BaeGI	GKGCMC	1 cut(s)	908
BanI	GGYRCC	3 cut(s)	1127, 1494, 1567
BanII	GRGCYC	1 cut(s)	908
BauI	CACGAG	1 cut(s)	1452
BbsI	GAAGAC	1 cut(s)	150
BbvI	GCAGC	1 cut(s)	260
BccI	CCATC	4 cut(s)	641, 1085, 1426, 1484
BceAI	ACGGC	2 cut(s)	848, 951
BciT130I	CCWGG	6 cut(s)	12, 36, 375, 424, 496, 834
BcoDI	GTCTC	4 cut(s)	124, 789, 800, 1361
BfaI	CTAG	3 cut(s)	81, 491, 885
BfoI	RGCGCY	1 cut(s)	408
BfuAI	ACCTGC	1 cut(s)	290
BglII	AGATCT	1 cut(s)	1276
BisI	GCNGC	4 cut(s)	249, 1061, 1106, 1566
BlsI	GCNGC	4 cut(s)	250, 1062, 1107, 1567
Bme1390I	CCNGG	6 cut(s)	12, 36, 375, 424, 496, 834
Bme18I	GGWCC	4 cut(s)	29, 827, 1153, 1170
BmgT120I	GGNCC	6 cut(s)	29, 827, 904, 905, 1153, 1170
BmiI	GGNNCC	6 cut(s)	428, 906, 1129, 1155, 1496, 1569
BmrFI	CCNGG	6 cut(s)	12, 36, 375, 424, 496, 834
BmsI	GCATC	2 cut(s)	337, 1396
BpiI	GAAGAC	1 cut(s)	150
BplI	GAGNNNNNCTC	2 cut(s)	998, 1030
BpmI	CTGGAG	2 cut(s)	106, 816
BpuEI	CTTGAG	1 cut(s)	410
Bsa29I	ATCGAT	1 cut(s)	1421
BsaJI	CCNNGG	2 cut(s)	374, 495
BsaWI	WCCGGW	3 cut(s)	26, 409, 1172
Bsc4I	CCNNNNNNNGG	3 cut(s)	11, 41, 839
Bse1I	ACTGG	2 cut(s)	540, 1396
BseAI	TCCGGA	3 cut(s)	26, 409, 1172
BseBI	CCWGG	6 cut(s)	12, 36, 375, 424, 496, 834
BseCI	ATCGAT	1 cut(s)	1421
BseDI	CCNNGG	2 cut(s)	374, 495
BseGI	GGATG	6 cut(s)	418, 454, 733, 842, 981, 1304
BseLI	CCNNNNNNNGG	3 cut(s)	11, 41, 839
BseMII	CTCAG	2 cut(s)	552, 1356
BseNI	ACTGG	2 cut(s)	540, 1396
BseSI	GKGCMC	1 cut(s)	908
BseXI	GCAGC	1 cut(s)	260
BseYI	CCCAGC	1 cut(s)	1268
Bsh1236I	CGCG	1 cut(s)	1565
BshFI	GGCC	5 cut(s)	343, 373, 422, 863, 906
BshNI	GGYRCC	3 cut(s)	1127, 1494, 1567
BshVI	ATCGAT	1 cut(s)	1421
BsiSI	CCGG	3 cut(s)	27, 410, 1173
BslI	CCNNNNNNNGG	3 cut(s)	11, 41, 839
BsmAI	GTCTC	4 cut(s)	124, 789, 800, 1361
BsmBI	CGTCTC	2 cut(s)	124, 789
BsnI	GGCC	5 cut(s)	343, 373, 422, 863, 906
Bsp120I	GGGCCC	1 cut(s)	904
Bsp1286I	GDGCHC	1 cut(s)	908
Bsp13I	TCCGGA	3 cut(s)	26, 409, 1172
Bsp143I	GATC	6 cut(s)	137, 478, 1144, 1264, 1276, 1321
BspACI	CCGC	4 cut(s)	251, 1060, 1105, 1565
BspANI	GGCC	5 cut(s)	343, 373, 422, 863, 906
BspCNI	CTCAG	2 cut(s)	553, 1357
BspDI	ATCGAT	1 cut(s)	1421
BspEI	TCCGGA	3 cut(s)	26, 409, 1172
BspFNI	CGCG	1 cut(s)	1565
BspLI	GGNNCC	6 cut(s)	428, 906, 1129, 1155, 1496, 1569
BspMI	ACCTGC	1 cut(s)	290
BspPI	GGATC	2 cut(s)	145, 1259
BspT107I	GGYRCC	3 cut(s)	1127, 1494, 1567
BsrI	ACTGG	2 cut(s)	540, 1396
BssECI	CCNNGG	2 cut(s)	374, 495
BssMI	GATC	6 cut(s)	137, 478, 1144, 1264, 1276, 1321
BssNAI	GTATAC	1 cut(s)	992
BssSI	CACGAG	1 cut(s)	1452
Bst1107I	GTATAC	1 cut(s)	992
Bst2BI	CACGAG	1 cut(s)	1452
Bst2UI	CCWGG	6 cut(s)	12, 36, 375, 424, 496, 834
Bst4CI	ACNGT	2 cut(s)	1170, 1541
BstC8I	GCNNGC	1 cut(s)	1449
BstDEI	CTNAG	6 cut(s)	365, 400, 561, 802, 1350, 1365
BstF5I	GGATG	6 cut(s)	418, 454, 733, 842, 981, 1304
BstFNI	CGCG	1 cut(s)	1565
BstH2I	RGCGCY	1 cut(s)	408
BstHHI	GCGC	2 cut(s)	407, 610
BstKTI	GATC	6 cut(s)	140, 481, 1147, 1267, 1279, 1324
BstMAI	GTCTC	4 cut(s)	124, 789, 800, 1361
BstMBI	GATC	6 cut(s)	137, 478, 1144, 1264, 1276, 1321
BstMWI	GCNNNNNNNGC	4 cut(s)	665, 875, 1069, 1325
BstNI	CCWGG	6 cut(s)	12, 36, 375, 424, 496, 834
BstSCI	CCNGG	6 cut(s)	10, 34, 373, 422, 494, 832
BstSLI	GKGCMC	1 cut(s)	908
BstUI	CGCG	1 cut(s)	1565
BstV1I	GCAGC	1 cut(s)	260
BstV2I	GAAGAC	1 cut(s)	150
BstX2I	RGATCY	3 cut(s)	137, 1264, 1276
BstXI	CCANNNNNNTGG	1 cut(s)	1505
BstYI	RGATCY	3 cut(s)	137, 1264, 1276
BstZ17I	GTATAC	1 cut(s)	992
Bsu15I	ATCGAT	1 cut(s)	1421
BsuRI	GGCC	5 cut(s)	343, 373, 422, 863, 906
BsuTUI	ATCGAT	1 cut(s)	1421
BtsCI	GGATG	6 cut(s)	418, 454, 733, 842, 981, 1304
BtsIMutI	CAGTG	4 cut(s)	533, 848, 1318, 1537
BveI	ACCTGC	1 cut(s)	290
Cac8I	GCNNGC	1 cut(s)	1449
CfoI	GCGC	2 cut(s)	407, 610
Cfr13I	GGNCC	6 cut(s)	29, 827, 904, 905, 1153, 1170
ClaI	ATCGAT	1 cut(s)	1421
CpoI	CGGWCCG	1 cut(s)	1170
Csp6I	GTAC	1 cut(s)	1495
CspI	CGGWCCG	1 cut(s)	1170
CviAII	CATG	6 cut(s)	62, 148, 286, 987, 1047, 1555
CviQI	GTAC	1 cut(s)	1495
DdeI	CTNAG	6 cut(s)	365, 400, 561, 802, 1350, 1365
DpnI	GATC	6 cut(s)	139, 480, 1146, 1266, 1278, 1323
DpnII	GATC	6 cut(s)	137, 478, 1144, 1264, 1276, 1321
DraI	TTTAAA	3 cut(s)	243, 684, 772
DrdI	GACNNNNNNGTC	1 cut(s)	187
DseDI	GACNNNNNNGTC	1 cut(s)	187
Eco147I	AGGCCT	1 cut(s)	343
Eco24I	GRGCYC	1 cut(s)	908
Eco47I	GGWCC	4 cut(s)	29, 827, 1153, 1170
Eco57I	CTGAAG	3 cut(s)	162, 633, 1294
EcoO109I	RGGNCCY	2 cut(s)	904, 905
EcoRI	GAATTC	1 cut(s)	298
EcoRII	CCWGG	6 cut(s)	10, 34, 373, 422, 494, 832
EcoT38I	GRGCYC	1 cut(s)	908
Esp3I	CGTCTC	2 cut(s)	124, 789
FaeI	CATG	6 cut(s)	65, 151, 289, 990, 1050, 1558
FatI	CATG	6 cut(s)	61, 147, 285, 986, 1046, 1554
FblI	GTMKAC	1 cut(s)	991
Fnu4HI	GCNGC	4 cut(s)	249, 1061, 1106, 1566
FokI	GGATG	6 cut(s)	425, 441, 740, 849, 988, 1311
FriOI	GRGCYC	1 cut(s)	908
Fsp4HI	GCNGC	4 cut(s)	249, 1061, 1106, 1566
FspBI	CTAG	3 cut(s)	81, 491, 885
GlaI	GCGC	2 cut(s)	406, 609
GluI	GCNGC	4 cut(s)	249, 1061, 1106, 1566
GsaI	CCCAGC	1 cut(s)	1272
GsuI	CTGGAG	2 cut(s)	106, 816
HaeII	RGCGCY	1 cut(s)	408
HaeIII	GGCC	5 cut(s)	343, 373, 422, 863, 906
HapII	CCGG	3 cut(s)	27, 410, 1173
HhaI	GCGC	2 cut(s)	407, 610
Hin1II	CATG	6 cut(s)	65, 151, 289, 990, 1050, 1558
Hin6I	GCGC	2 cut(s)	405, 608
HinP1I	GCGC	2 cut(s)	405, 608
HindIII	AAGCTT	1 cut(s)	1352
HinfI	GANTC	5 cut(s)	696, 743, 1013, 1525, 1551
HpaII	CCGG	3 cut(s)	27, 410, 1173
Hpy166II	GTNNAC	5 cut(s)	577, 992, 1012, 1187, 1535
Hpy188I	TCNGA	5 cut(s)	142, 180, 279, 954, 1405
Hpy188III	TCNNGA	8 cut(s)	27, 410, 553, 710, 764, 1173, 1234, 1480
Hpy8I	GTNNAC	5 cut(s)	577, 992, 1012, 1187, 1535
HpyAV	CCTTC	8 cut(s)	100, 150, 461, 686, 687, 789, 1034, 1170
HpyCH4III	ACNGT	2 cut(s)	1170, 1541
HpyCH4IV	ACGT	1 cut(s)	294
HpyCH4V	TGCA	6 cut(s)	285, 704, 971, 1247, 1292, 1409
HpyF10VI	GCNNNNNNNGC	4 cut(s)	665, 875, 1069, 1325
HpyF3I	CTNAG	6 cut(s)	365, 400, 561, 802, 1350, 1365
HpySE526I	ACGT	1 cut(s)	294
Hsp92II	CATG	6 cut(s)	65, 151, 289, 990, 1050, 1558
HspAI	GCGC	2 cut(s)	405, 608
Kpn2I	TCCGGA	3 cut(s)	26, 409, 1172
KpnI	GGTACC	1 cut(s)	1498
Kzo9I	GATC	6 cut(s)	137, 478, 1144, 1264, 1276, 1321
LmnI	GCTCC	6 cut(s)	190, 253, 329, 412, 518, 1316
Lsp1109I	GCAGC	1 cut(s)	260
LweI	GCATC	2 cut(s)	337, 1396
MaeI	CTAG	3 cut(s)	81, 491, 885
MaeII	ACGT	1 cut(s)	294
MaeIII	GTNAC	1 cut(s)	1164
MalI	GATC	6 cut(s)	139, 480, 1146, 1266, 1278, 1323
MboI	GATC	6 cut(s)	137, 478, 1144, 1264, 1276, 1321
MboII	GAAGA	4 cut(s)	155, 473, 626, 1526
MflI	RGATCY	3 cut(s)	137, 1264, 1276
MhlI	GDGCHC	1 cut(s)	908
MlyI	GAGTC	2 cut(s)	1007, 1519
MmeI	TCCRAC	2 cut(s)	496, 910
MroI	TCCGGA	3 cut(s)	26, 409, 1172
MroXI	GAANNNNTTC	1 cut(s)	660
MseI	TTAA	6 cut(s)	242, 683, 749, 771, 900, 1545
MslI	CAYNNNNRTG	2 cut(s)	638, 1297
MspA1I	CMGCKG	2 cut(s)	251, 1060
MspI	CCGG	3 cut(s)	27, 410, 1173
MspR9I	CCNGG	6 cut(s)	12, 36, 375, 424, 496, 834
MvaI	CCWGG	6 cut(s)	12, 36, 375, 424, 496, 834
MvnI	CGCG	1 cut(s)	1565
MwoI	GCNNNNNNNGC	4 cut(s)	665, 875, 1069, 1325
NdeII	GATC	6 cut(s)	137, 478, 1144, 1264, 1276, 1321
NlaIII	CATG	6 cut(s)	65, 151, 289, 990, 1050, 1558
NlaIV	GGNNCC	6 cut(s)	428, 906, 1129, 1155, 1496, 1569
PceI	AGGCCT	1 cut(s)	343
PdmI	GAANNNNTTC	1 cut(s)	660
PfeI	GAWTC	3 cut(s)	696, 743, 1551
PflMI	CCANNNNNTGG	2 cut(s)	41, 839
PfoI	TCCNGGA	1 cut(s)	832
PkrI	GCNGC	4 cut(s)	250, 1062, 1107, 1567
PleI	GAGTC	2 cut(s)	1007, 1519
PpsI	GAGTC	2 cut(s)	1007, 1519
PsiI	TTATAA	1 cut(s)	1121
Psp6I	CCWGG	6 cut(s)	10, 34, 373, 422, 494, 832
PspFI	CCCAGC	1 cut(s)	1268
PspGI	CCWGG	6 cut(s)	10, 34, 373, 422, 494, 832
PspN4I	GGNNCC	6 cut(s)	428, 906, 1129, 1155, 1496, 1569
PspOMI	GGGCCC	1 cut(s)	904
PspPI	GGNCC	6 cut(s)	29, 827, 904, 905, 1153, 1170
PsuI	RGATCY	3 cut(s)	137, 1264, 1276
RsaI	GTAC	1 cut(s)	1496
RsaNI	GTAC	1 cut(s)	1495
RseI	CAYNNNNRTG	2 cut(s)	638, 1297
Rsr2I	CGGWCCG	1 cut(s)	1170
RsrII	CGGWCCG	1 cut(s)	1170
SaqAI	TTAA	6 cut(s)	242, 683, 749, 771, 900, 1545
SatI	GCNGC	4 cut(s)	249, 1061, 1106, 1566
Sau3AI	GATC	6 cut(s)	137, 478, 1144, 1264, 1276, 1321
Sau96I	GGNCC	6 cut(s)	29, 827, 904, 905, 1153, 1170
SchI	GAGTC	2 cut(s)	1007, 1519
ScrFI	CCNGG	6 cut(s)	12, 36, 375, 424, 496, 834
SduI	GDGCHC	1 cut(s)	908
SfaNI	GCATC	2 cut(s)	337, 1396
SinI	GGWCC	4 cut(s)	29, 827, 1153, 1170
SmiI	ATTTAAAT	1 cut(s)	772
SmiMI	CAYNNNNRTG	2 cut(s)	638, 1297
SmlI	CTYRAG	1 cut(s)	389
SmoI	CTYRAG	1 cut(s)	389
SseBI	AGGCCT	1 cut(s)	343
SsiI	CCGC	4 cut(s)	251, 1060, 1105, 1565
SspI	AATATT	3 cut(s)	18, 960, 1435
SspMI	CTAG	3 cut(s)	81, 491, 885
StuI	AGGCCT	1 cut(s)	343
StyD4I	CCNGG	6 cut(s)	10, 34, 373, 422, 494, 832
SwaI	ATTTAAAT	1 cut(s)	772
TaaI	ACNGT	2 cut(s)	1170, 1541
TaiI	ACGT	1 cut(s)	297
TaqI	TCGA	2 cut(s)	1421, 1479
TauI	GCSGC	3 cut(s)	1063, 1108, 1568
TfiI	GAWTC	3 cut(s)	696, 743, 1551
Tru1I	TTAA	6 cut(s)	242, 683, 749, 771, 900, 1545
Tru9I	TTAA	6 cut(s)	242, 683, 749, 771, 900, 1545
TscAI	CASTG	4 cut(s)	540, 855, 1318, 1544
TseI	GCWGC	1 cut(s)	248
TspGWI	ACGGA	2 cut(s)	177, 840
TspRI	CASTG	4 cut(s)	540, 855, 1318, 1544
Van91I	CCANNNNNTGG	2 cut(s)	41, 839
VpaK11BI	GGWCC	4 cut(s)	29, 827, 1153, 1170
XapI	RAATTY	6 cut(s)	298, 758, 767, 1085, 1379, 1485
XmiI	GTMKAC	1 cut(s)	991
XmnI	GAANNNNTTC	1 cut(s)	660
XspI	CTAG	3 cut(s)	81, 491, 885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.