Rorug07G0267400

SnoaL-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0009015
Physical Location & Seq
Reverse (-)
25226854 .. 25231606
4753 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0267400.1

Sequence Viewer

Length: 3303 bp
ATGCATACAATGAAGAGAACTCGGTTCTCCCTCATGTTGCTGTTACACTGTTGTATGTGTAGCTTTACTGGTGTTGTGGTAGCAGCACAAAACAAGAATGTCAACACAGACCAGTTGGCTCTTCTTGCTCTCAAAGCTCACATCACCAGTGATCCTCAGAAAATCATGACCAACTGGTCCACAGCCACCTCGGTCTGCAACTGGGTTGGCATTACTTGTGGTGCTCGCCACCTTCGAGTGGCGGTCTTGAATATCTCTTACTTTGGTCTCACAGGAACCATTCCTCCAGAGCTAGGAAACCTGTCATTTCTTGTTCAACTGGACTTCACCAATAACAGTTTCCATGGCACTTTGCCCATGGAGTTGTCTCGCTTGCGTCGATTGAAGTTGATTAGCTTTGGATACAACAATTTTATTGGTTCCTTACCCACTGAAATCTTCAACCTATCTGCACTGGAAAAGATTGATCTGACCAATAACCATCTATCAGGTAGCATACCAAGAGAAATCGGGAACTTAACAATGCTGAAGGAGATAATCCTTGATGGTAACAACTTCAAAGGAATTCCAAACGAGATCGGCACTTTAGCTCAGCTGGAGGTGTTGAATGTGCAAGACAATGCACTAAATGGTCCTTTGCCTGTTGCTGTCTTCAACTTGTCTTCTTTGACCCAAATGGGACTAACAAAGAACAACTTGACTGGTAGTATTCCAGACAATATATGCGAAAACCTTCCCAGTATTCAAGCACTTTTTTTGTCTTACAACCAGTTTGATGGTCCACTTCCATCCAAATTATGGCAATGCAAAGAGCTTCTCTATTTATCACTGTCGTTTAACAAATTCAGTGGAGGCATACCCAGAAATATTGGGAACTTGACCAGTTTAATGCATATATATCTTGCGGCAAACAATTTGCAAGGTACTATACCACATGAGATTGGTGATCTTTCAAAATTACAGGTTTTGTCACTTCCAGGTGTTAATGTTCATGGTGTTATCCCATCCACAATCTTCAACATGTCCTCACTGATAGGAATATCGCTAGCTAGTAATCAGCTCTCAGGTAGCCTCCCAGCAAACATAGGCCTTGGGGTTCCACATCTAAAGCAGCTTCTTGTATCAGGGAATAACCTCACTGGAGCAATTCCAAACTTCATCTCTAATGCCTCTAACATCATAACCATAGACATGGCCGCTAACTATTTTTCGGGGTTTATTCCTAGCAAGCTCTGTGCCTTACCATACCTTGAGCGCCTAAACTTAGCAGAGAATTATTTGACTATTGATACTTCTGCTCCAGAAGTAAACATATTCTCTTGCTTGTCCAATCTTCAAAATTTAGGGACGCTGTTACTGGCAAAAAATCCACTAAACGCCATGCTTCCCATTTCCTTTGCCAACCTCTCTACATCACTTCAATATATTGATCTAAGCGAATCCAATGTGATGGGTAACATTCCTTATGATACTGGCAACTTGAGTAGCCTGACAGCCTTATTCTTAGGTACCAATCAATTAGGTGGACCAATTCCAACTTCAATGGGAAGCCTACAGAATCTCCAAGCTTTGAATTTGAAGGAGAACAGATTGCAAGGACATATCCCAAATGAACTTTGTCAACTTCAGAATCTAGCCTTTTTACTGATTGGGGTAAATCAGCTCTCTGGTTCAATACCTTCTTGCTTGGGCAATTTAGCTACATCACTGAGAAGTCTATATCTGGGGTCCAATTTTTTAAATTCCACAATACCATCTACCTTGTGGGGACTTGCATATCTCTTGCACATAGACTTGTCATCCAATTCTCTAACTGGACCTCTCCCAGAAGATGTTGGTACTCTGAAAGTTGTGATAGATATAGATTTATCAAACAACCGTTTATCTGGTGGGCTACCGAGCAGCATTGGGGTTCTACAGGATTTGGTCACTCTCGCCTTGGAAAATAATAATTTAGAAGGCTCTATTCCTAGTTCATTTGGGAACTTGCTAAGCTTAGAACTCTTGGACTTGTCTAAAAACAATCTATCTGGAGTGATTCCAAAGTCTCTAGAACAAGTCTTGCATCTCAACTATCTAAATTTGTCTTACAACAGACTGGAGGGAGAAATTCCAGCAGGCGGACCTTTCAAAAACTTCTCTTCTGAATCATTTGTCTCAAATGGTGCGCTCTGTGGTGAATCCCGACTGCATGTTCCATCATGCAAAAACAGTTCAGTGAAACCACCTTCAACTAAAGCTAGTAGATCCATCTTGAAGTTTATTATTCCGGGGATAGTGTCAGTAATACTCCTAGTGGCCTCCCTATTGGTGTTGATACTGCACAGGAAGAAGAATGTGAATGTTGCAATGGAGACTACCTTGTTATCTCAACCCCTATGGAGAAAAATTTCGTACTTGCAACTTCGAAGTGCAACAGATGGGTTTAATGTAAGCAACTTACTTGGAACCGGGGGTTTTGGCTCAGTGTATAAAGGAACACTAGATGGGATAGATGTGGCGATAAAGGTTTTCAATTTACAGCTAGAAGGGACTTTCAAAAGTTTTCATATTGAATGTGAGATGCTAAGCAAAATTCGCCACCGAAATCTTATCAAGATCATTAGTTGTTGCAGTCAAACTGATTTCAAAGCAGTGGTACTGAACTACATGCCTAATGGGAGCCTTGACAAGTGGTTGTATTCTCAGAGCTTTTCTCTGAACACCCTGCAGAGGTTGAATATAATGATAGATGTTGCGTCGGCATTGGAATATCTGCATCATGGTTATGGAACAACTATTGTCCATTGTGATCTGAAGCCCAGCAATATACTACTGGATAATGATATGGGAGCACATGTAGCTGATTTTGGTATTGCAAAACTCCTAGGCGGAGGAGATTCTATGACACAGACAATGACCCTCGCCACAATTGGGTACATGGCTCCAGAATATGGAATGGATGGAATAGTTTCCAGAAGAGGGGATGTGTACAGTTTTGGTATTGTACTCATGGAAACATTCACAAAAAAGAAGCCGACAGATGAGATGTTTGTTGGGGAAATGAGTTTGAAGCAATGGGTTGCGAGTTCACTATCATCTCCAGATGCAACAGTTGAAGTTGTGGACGCCAATTTACTTGGGAAACAGGAAGATGTTAGTTTCATAAGCAAGAGGGTCTGTTTATCATCCATAATGGAATTAGCTGTAGCTTGTTCTGCAGAATCACCAGAAGAGAGGATGAATATGCAAGATGCTTTAGTGACACTCAATAAAATTAAGGTGAAGCTTTTGGAAGACGTTGAAGGTGGAGGTGTGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NTF2 SnoaL_2

Protein Analysis

1100

Amino Acids

119.1

Weight (kDa)

6.18

Isoelectric Point (pI)

36.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 35 - 73 3.3e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 85 - 180 6.9e-09 Leucine-rich repeat region
LRR_8 PF13855 128 - 186 1e-06 Leucine rich repeat
LRR_14 PF23598 168 - 255 5.2e-08 Leucine-rich repeat region
LRR_14 PF23598 235 - 445 3.6e-09 Leucine-rich repeat region
LRR_14 PF23598 493 - 575 3.8e-06 Leucine-rich repeat region
LRR_8 PF13855 569 - 628 1e-05 Leucine rich repeat
LRR_14 PF23598 579 - 698 7.6e-08 Leucine-rich repeat region
LRR_8 PF13855 642 - 700 1.5e-08 Leucine rich repeat
Pkinase PF00069 810 - 1080 1.1e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 811 - 1078 6.9e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0009015)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G71480 AT1G71480 AT1G71480
fragaria_vesca FvH4_5g33211 FvH4_5g33211 FvH4_5g33211 FvH4_5g33211 FvH4_5g33211
malus_domestica MD08G1213700.v1.1
prunus_persica Prupe.1G545800_v2.0.a1
pyrus_communis pycom08g18350
rosa_chinensis RchiOBHm_Chr7g0231601
rosa_laevigata RLG00000001407
rosa_multiflora Rmu_sc0005937.1_g000001
rosa_roxburghii Rroxscaffold_3G00229060
rosa_rugosa Rorug07G0267400 Rorug07G0267500
rosa_samantha Rh7AG422200 Rh7BG396500 Rh7CG442400 Rh7DG414500
rosa_wichuraiana Rw7G034810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 175
Acc65I GGTACC 1 cut(s) 1508
AccB1I GGYRCC 1 cut(s) 1508
AccB7I CCANNNNNTGG 2 cut(s) 798, 2933
AciI CCGC 5 cut(s) 242, 905, 1197, 2121, 2871
AclWI GGATC 2 cut(s) 146, 2241
AcoI YGGCCR 1 cut(s) 1194
AcsI RAATTY 9 cut(s) 564, 842, 1339, 1573, 1741, 2080, 2109, 2388, 2574
AcuI CTGAAG 3 cut(s) 548, 1610, 2816
AcyI GRCGYC 1 cut(s) 3108
AfaI GTAC 8 cut(s) 925, 1510, 1840, 2396, 2640, 2918, 2972, 2988
AfiI CCNNNNNNNGG 8 cut(s) 238, 293, 798, 2120, 2712, 2913, 2933, 2961
AflIII ACRYGT 2 cut(s) 1020, 2836
AjnI CCWGG 1 cut(s) 976
AjuI GAANNNNNNNTTGG 4 cut(s) 323, 355, 1522, 1554
AloI GAACNNNNNNTCC 2 cut(s) 268, 300
Alw21I GWGCWC 2 cut(s) 226, 2836
Alw26I GTCTC 5 cut(s) 272, 372, 2052, 2161, 2348
AlwI GGATC 2 cut(s) 146, 2241
AoxI GGCC 3 cut(s) 1087, 1194, 2298
ApeKI GCWGC 3 cut(s) 83, 1111, 1902
ApoI RAATTY 9 cut(s) 564, 842, 1339, 1573, 1741, 2080, 2109, 2388, 2574
Asp700I GAANNNNTTC 3 cut(s) 732, 2389, 2950
Asp718I GGTACC 1 cut(s) 1508
AspA2I CCTAGG 1 cut(s) 2866
AspLEI GCGC 2 cut(s) 1257, 2170
AspS9I GGNCC 7 cut(s) 177, 632, 779, 1526, 1728, 1817, 2123
AsuC2I CCSGG 2 cut(s) 2271, 2452
AsuHPI GGTGA 6 cut(s) 136, 319, 956, 2189, 3198, 3274
AsuII TTCGAA 1 cut(s) 2407
AsuNHI GCTAGC 1 cut(s) 1045
AvaII GGWCC 7 cut(s) 177, 632, 779, 1526, 1728, 1817, 2123
AvrII CCTAGG 1 cut(s) 2866
BanI GGYRCC 1 cut(s) 1508
BbsI GAAGAC 3 cut(s) 643, 654, 3282
Bbv12I GWGCWC 2 cut(s) 226, 2836
BbvI GCAGC 3 cut(s) 95, 1123, 1914
BciT130I CCWGG 1 cut(s) 978
BciVI GTATCC 1 cut(s) 395
BcnI CCSGG 2 cut(s) 2271, 2452
BcoDI GTCTC 5 cut(s) 272, 372, 2052, 2161, 2348
BfmI CTRYAG 5 cut(s) 1553, 1916, 2708, 3186, 3198
BfoI RGCGCY 1 cut(s) 1258
BfuI GTATCC 1 cut(s) 395
BisI GCNGC 5 cut(s) 84, 906, 1112, 1197, 1903
BlnI CCTAGG 1 cut(s) 2866
BlpI GCTNAGC 3 cut(s) 591, 1991, 2567
BlsI GCNGC 5 cut(s) 85, 907, 1113, 1198, 1904
Bme1390I CCNGG 3 cut(s) 978, 2271, 2452
Bme18I GGWCC 7 cut(s) 177, 632, 779, 1526, 1728, 1817, 2123
BmgT120I GGNCC 7 cut(s) 177, 632, 779, 1526, 1728, 1817, 2123
BmiI GGNNCC 8 cut(s) 277, 421, 1098, 1510, 1729, 2449, 2663, 2925
BmrFI CCNGG 3 cut(s) 978, 2271, 2452
BmrI ACTGGG 2 cut(s) 211, 732
BmsI GCATC 5 cut(s) 2074, 2553, 2767, 3076, 3223
BmtI GCTAGC 1 cut(s) 1049
BmuI ACTGGG 2 cut(s) 211, 732
BpiI GAAGAC 3 cut(s) 643, 654, 3282
BplI GAGNNNNNCTC 2 cut(s) 2680, 2712
BpmI CTGGAG 8 cut(s) 270, 617, 1161, 1284, 2052, 2120, 2910, 3066
Bpu1102I GCTNAGC 3 cut(s) 591, 1991, 2567
Bpu14I TTCGAA 1 cut(s) 2407
BpuEI CTTGAG 2 cut(s) 1271, 1501
BpuMI CCSGG 2 cut(s) 2271, 2452
BsaHI GRCGYC 1 cut(s) 3108
BsaI GGTCTC 1 cut(s) 272
BsaJI CCNNGG 8 cut(s) 189, 343, 357, 1090, 1938, 2270, 2451, 2866
BsaXI ACNNNNNCTCC 9 cut(s) 268, 298, 1282, 1312, 1545, 1575, 2823, 2853, 3282
Bsc4I CCNNNNNNNGG 8 cut(s) 238, 293, 798, 2120, 2712, 2913, 2933, 2961
Bse3DI GCAATG 3 cut(s) 809, 2355, 3062
BseBI CCWGG 1 cut(s) 978
BseDI CCNNGG 8 cut(s) 189, 343, 357, 1090, 1938, 2270, 2451, 2866
BseGI GGATG 7 cut(s) 788, 1004, 1799, 2947, 2971, 3167, 3225
BseLI CCNNNNNNNGG 8 cut(s) 238, 293, 798, 2120, 2712, 2913, 2933, 2961
BseMI GCAATG 3 cut(s) 809, 2355, 3062
BseMII CTCAG 6 cut(s) 170, 605, 1077, 1700, 2478, 2699
BseRI GAGGAG 1 cut(s) 2889
BseXI GCAGC 3 cut(s) 95, 1123, 1914
BseYI CCCAGC 2 cut(s) 1075, 2801
BsgI GTGCAG 2 cut(s) 435, 2306
BshFI GGCC 3 cut(s) 1089, 1196, 2300
BshNI GGYRCC 1 cut(s) 1508
BsiHKAI GWGCWC 2 cut(s) 226, 2836
BsiSI CCGG 2 cut(s) 2270, 2451
BslFI GGGAC 4 cut(s) 693, 1360, 1782, 2545
BslI CCNNNNNNNGG 8 cut(s) 238, 293, 798, 2120, 2712, 2913, 2933, 2961
BsmAI GTCTC 5 cut(s) 272, 372, 2052, 2161, 2348
BsmFI GGGAC 4 cut(s) 693, 1360, 1782, 2545
BsnI GGCC 3 cut(s) 1089, 1196, 2300
Bso31I GGTCTC 1 cut(s) 272
Bsp119I TTCGAA 1 cut(s) 2407
Bsp1286I GDGCHC 2 cut(s) 226, 2836
Bsp1407I TGTACA 1 cut(s) 2970
Bsp143I GATC 8 cut(s) 151, 466, 576, 946, 1429, 2246, 2598, 2791
Bsp1720I GCTNAGC 3 cut(s) 591, 1991, 2567
Bsp19I CCATGG 2 cut(s) 343, 357
BspACI CCGC 5 cut(s) 242, 905, 1197, 2121, 2871
BspANI GGCC 3 cut(s) 1089, 1196, 2300
BspCNI CTCAG 6 cut(s) 169, 604, 1076, 1701, 2477, 2698
BspHI TCATGA 1 cut(s) 165
BspLI GGNNCC 8 cut(s) 277, 421, 1098, 1510, 1729, 2449, 2663, 2925
BspMAI CTGCAG 2 cut(s) 2712, 3202
BspOI GCTAGC 1 cut(s) 1049
BspPI GGATC 2 cut(s) 146, 2241
BspQI GCTCTTC 1 cut(s) 126
BspT104I TTCGAA 1 cut(s) 2407
BspT107I GGYRCC 1 cut(s) 1508
BspTNI GGTCTC 1 cut(s) 272
BsrDI GCAATG 3 cut(s) 809, 2355, 3062
BsrGI TGTACA 1 cut(s) 2970
BssECI CCNNGG 8 cut(s) 189, 343, 357, 1090, 1938, 2270, 2451, 2866
BssMI GATC 8 cut(s) 151, 466, 576, 946, 1429, 2246, 2598, 2791
BssNI GRCGYC 1 cut(s) 3108
BssT1I CCWWGG 5 cut(s) 343, 357, 1090, 1938, 2866
Bst2UI CCWGG 1 cut(s) 978
Bst4CI ACNGT 7 cut(s) 50, 338, 831, 1880, 2213, 2975, 3094
Bst6I CTCTTC 5 cut(s) 8, 126, 2146, 2953, 3207
BstACI GRCGYC 1 cut(s) 3108
BstAUI TGTACA 1 cut(s) 2970
BstBI TTCGAA 1 cut(s) 2407
BstC8I GCNNGC 5 cut(s) 226, 374, 1047, 1229, 2119
BstDSI CCRYGG 2 cut(s) 343, 357
BstF5I GGATG 7 cut(s) 788, 1004, 1799, 2947, 2971, 3167, 3225
BstH2I RGCGCY 1 cut(s) 1258
BstHHI GCGC 2 cut(s) 1257, 2170
BstKTI GATC 8 cut(s) 154, 469, 579, 949, 1432, 2249, 2601, 2794
BstMAI GTCTC 5 cut(s) 272, 372, 2052, 2161, 2348
BstMBI GATC 8 cut(s) 151, 466, 576, 946, 1429, 2246, 2598, 2791
BstMWI GCNNNNNNNGC 5 cut(s) 125, 134, 2577, 2840, 3197
BstNI CCWGG 1 cut(s) 978
BstNSI RCATGY 4 cut(s) 1024, 2195, 2653, 2840
BstSCI CCNGG 3 cut(s) 976, 2269, 2450
BstSFI CTRYAG 5 cut(s) 1553, 1916, 2708, 3186, 3198
BstV1I GCAGC 3 cut(s) 95, 1123, 1914
BstV2I GAAGAC 3 cut(s) 643, 654, 3282
BstX2I RGATCY 1 cut(s) 2246
BstXI CCANNNNNNTGG 3 cut(s) 776, 1192, 1450
BstYI RGATCY 1 cut(s) 2246
BsuI GTATCC 1 cut(s) 395
BsuRI GGCC 3 cut(s) 1089, 1196, 2300
BtgI CCRYGG 2 cut(s) 343, 357
BtsCI GGATG 7 cut(s) 788, 1004, 1799, 2947, 2971, 3167, 3225
BtsI GCAGTG 1 cut(s) 2640
Cac8I GCNNGC 5 cut(s) 226, 374, 1047, 1229, 2119
CciI TCATGA 1 cut(s) 165
CfoI GCGC 2 cut(s) 1257, 2170
Cfr13I GGNCC 7 cut(s) 177, 632, 779, 1526, 1728, 1817, 2123
CseI GACGC 4 cut(s) 365, 1357, 2727, 3116
Csp6I GTAC 8 cut(s) 924, 1509, 1839, 2395, 2639, 2917, 2971, 2987
CspCI CAANNNNNGTGG 2 cut(s) 829, 864
CviQI GTAC 8 cut(s) 924, 1509, 1839, 2395, 2639, 2917, 2971, 2987
DpnI GATC 8 cut(s) 153, 468, 578, 948, 1431, 2248, 2600, 2793
DpnII GATC 8 cut(s) 151, 466, 576, 946, 1429, 2246, 2598, 2791
DraI TTTAAA 1 cut(s) 1740
DrdI GACNNNNNNGTC 1 cut(s) 175
DseDI GACNNNNNNGTC 1 cut(s) 175
EaeI YGGCCR 1 cut(s) 1194
Eam1104I CTCTTC 5 cut(s) 8, 126, 2146, 2953, 3207
EarI CTCTTC 5 cut(s) 8, 126, 2146, 2953, 3207
EciI GGCGGA 2 cut(s) 2136, 2886
Eco130I CCWWGG 5 cut(s) 343, 357, 1090, 1938, 2866
Eco147I AGGCCT 1 cut(s) 1089
Eco31I GGTCTC 1 cut(s) 272
Eco47I GGWCC 7 cut(s) 177, 632, 779, 1526, 1728, 1817, 2123
Eco57I CTGAAG 3 cut(s) 548, 1610, 2816
EcoRI GAATTC 1 cut(s) 564
EcoRII CCWGG 1 cut(s) 976
EcoT14I CCWWGG 5 cut(s) 343, 357, 1090, 1938, 2866
EcoT22I ATGCAT 2 cut(s) 6, 894
ErhI CCWWGG 5 cut(s) 343, 357, 1090, 1938, 2866
FalI AAGNNNNNCTT 2 cut(s) 680, 712
FaqI GGGAC 4 cut(s) 693, 1360, 1782, 2545
Fnu4HI GCNGC 5 cut(s) 84, 906, 1112, 1197, 1903
FokI GGATG 7 cut(s) 775, 991, 1786, 2954, 2978, 3154, 3232
Fsp4HI GCNGC 5 cut(s) 84, 906, 1112, 1197, 1903
GlaI GCGC 2 cut(s) 1256, 2169
GluI GCNGC 5 cut(s) 84, 906, 1112, 1197, 1903
GsaI CCCAGC 2 cut(s) 1079, 2805
GsuI CTGGAG 8 cut(s) 270, 617, 1161, 1284, 2052, 2120, 2910, 3066
HaeII RGCGCY 1 cut(s) 1258
HaeIII GGCC 3 cut(s) 1089, 1196, 2300
HapII CCGG 2 cut(s) 2270, 2451
HgaI GACGC 4 cut(s) 365, 1357, 2727, 3116
HhaI GCGC 2 cut(s) 1257, 2170
Hin1I GRCGYC 1 cut(s) 3108
Hin6I GCGC 2 cut(s) 1255, 2168
HinP1I GCGC 2 cut(s) 1255, 2168
HincII GTYRAC 2 cut(s) 103, 1622
HindII GTYRAC 2 cut(s) 103, 1622
HindIII AAGCTT 3 cut(s) 1566, 1993, 3266
HinfI GANTC 8 cut(s) 1439, 1558, 1630, 2038, 2147, 2180, 2879, 3203
HpaII CCGG 2 cut(s) 2270, 2451
HphI GGTGA 6 cut(s) 136, 319, 956, 2189, 3198, 3274
Hpy166II GTNNAC 9 cut(s) 103, 180, 782, 1309, 1526, 1622, 2971, 3071, 3106
Hpy188I TCNGA 8 cut(s) 159, 471, 1629, 1845, 2146, 2688, 2700, 2796
Hpy8I GTNNAC 9 cut(s) 103, 180, 782, 1309, 1526, 1622, 2971, 3071, 3106
Hpy99I CGWCG 2 cut(s) 381, 2743
HpyAV CCTTC 9 cut(s) 242, 523, 743, 1573, 1689, 1952, 2238, 2522, 3278
HpyCH4III ACNGT 7 cut(s) 50, 338, 831, 1880, 2213, 2975, 3094
HpyCH4IV ACGT 1 cut(s) 3279
HpyF10VI GCNNNNNNNGC 5 cut(s) 125, 134, 2577, 2840, 3197
HpySE526I ACGT 1 cut(s) 3279
Hsp92I GRCGYC 1 cut(s) 3108
HspAI GCGC 2 cut(s) 1255, 2168
KpnI GGTACC 1 cut(s) 1512
Kzo9I GATC 8 cut(s) 151, 466, 576, 946, 1429, 2246, 2598, 2791
LguI GCTCTTC 1 cut(s) 126
LmnI GCTCC 5 cut(s) 1142, 1303, 2661, 2831, 2929
Lsp1109I GCAGC 3 cut(s) 95, 1123, 1914
LweI GCATC 5 cut(s) 2074, 2553, 2767, 3076, 3223
MaeII ACGT 1 cut(s) 3279
MaeIII GTNAC 7 cut(s) 42, 548, 969, 1353, 1454, 1927, 3241
MalI GATC 8 cut(s) 153, 468, 578, 948, 1431, 2248, 2600, 2793
MboI GATC 8 cut(s) 151, 466, 576, 946, 1429, 2246, 2598, 2791
MfeI CAATTG 1 cut(s) 2910
MflI RGATCY 1 cut(s) 2246
MhlI GDGCHC 2 cut(s) 226, 2836
MmeI TCCRAC 1 cut(s) 1559
Mph1103I ATGCAT 2 cut(s) 6, 894
MroXI GAANNNNTTC 3 cut(s) 732, 2389, 2950
MseI TTAA 7 cut(s) 518, 837, 887, 984, 1739, 2427, 3258
MslI CAYNNNNRTG 2 cut(s) 1190, 2766
MspA1I CMGCKG 1 cut(s) 595
MspI CCGG 2 cut(s) 2270, 2451
MspR9I CCNGG 3 cut(s) 978, 2271, 2452
MunI CAATTG 1 cut(s) 2910
MvaI CCWGG 1 cut(s) 978
MwoI GCNNNNNNNGC 5 cut(s) 125, 134, 2577, 2840, 3197
NciI CCSGG 2 cut(s) 2271, 2452
NcoI CCATGG 2 cut(s) 343, 357
NdeII GATC 8 cut(s) 151, 466, 576, 946, 1429, 2246, 2598, 2791
NheI GCTAGC 1 cut(s) 1045
NlaIV GGNNCC 8 cut(s) 277, 421, 1098, 1510, 1729, 2449, 2663, 2925
NmuCI GTSAC 3 cut(s) 969, 1927, 3241
NsiI ATGCAT 2 cut(s) 6, 894
NspI RCATGY 4 cut(s) 1024, 2195, 2653, 2840
NspV TTCGAA 1 cut(s) 2407
PagI TCATGA 1 cut(s) 165
PceI AGGCCT 1 cut(s) 1089
PciI ACATGT 2 cut(s) 1020, 2836
PciSI GCTCTTC 1 cut(s) 126
PcsI WCGNNNNNNNCGW 2 cut(s) 232, 376
PdmI GAANNNNTTC 3 cut(s) 732, 2389, 2950
PfeI GAWTC 8 cut(s) 1439, 1558, 1630, 2038, 2147, 2180, 2879, 3203
PflMI CCANNNNNTGG 2 cut(s) 798, 2933
PkrI GCNGC 5 cut(s) 85, 907, 1113, 1198, 1904
PscI ACATGT 2 cut(s) 1020, 2836
Psp6I CCWGG 1 cut(s) 976
PspFI CCCAGC 2 cut(s) 1075, 2801
PspGI CCWGG 1 cut(s) 976
PspN4I GGNNCC 8 cut(s) 277, 421, 1098, 1510, 1729, 2449, 2663, 2925
PspPI GGNCC 7 cut(s) 177, 632, 779, 1526, 1728, 1817, 2123
PstI CTGCAG 2 cut(s) 2712, 3202
PsuI RGATCY 1 cut(s) 2246
PvuII CAGCTG 1 cut(s) 595
RsaI GTAC 8 cut(s) 925, 1510, 1840, 2396, 2640, 2918, 2972, 2988
RsaNI GTAC 8 cut(s) 924, 1509, 1839, 2395, 2639, 2917, 2971, 2987
RseI CAYNNNNRTG 2 cut(s) 1190, 2766
SapI GCTCTTC 1 cut(s) 126
SaqAI TTAA 7 cut(s) 518, 837, 887, 984, 1739, 2427, 3258
SatI GCNGC 5 cut(s) 84, 906, 1112, 1197, 1903
Sau3AI GATC 8 cut(s) 151, 466, 576, 946, 1429, 2246, 2598, 2791
Sau96I GGNCC 7 cut(s) 177, 632, 779, 1526, 1728, 1817, 2123
ScrFI CCNGG 3 cut(s) 978, 2271, 2452
SduI GDGCHC 2 cut(s) 226, 2836
SfaNI GCATC 5 cut(s) 2074, 2553, 2767, 3076, 3223
SfcI CTRYAG 5 cut(s) 1553, 1916, 2708, 3186, 3198
SfuI TTCGAA 1 cut(s) 2407
SinI GGWCC 7 cut(s) 177, 632, 779, 1526, 1728, 1817, 2123
SmiMI CAYNNNNRTG 2 cut(s) 1190, 2766
SmlI CTYRAG 2 cut(s) 1250, 1480
SmoI CTYRAG 2 cut(s) 1250, 1480
SseBI AGGCCT 1 cut(s) 1089
SsiI CCGC 5 cut(s) 242, 905, 1197, 2121, 2871
SspI AATATT 1 cut(s) 868
StuI AGGCCT 1 cut(s) 1089
StyD4I CCNGG 3 cut(s) 976, 2269, 2450
StyI CCWWGG 5 cut(s) 343, 357, 1090, 1938, 2866
TaaI ACNGT 7 cut(s) 50, 338, 831, 1880, 2213, 2975, 3094
TaiI ACGT 1 cut(s) 3282
TaqI TCGA 3 cut(s) 235, 379, 2407
TaqII GACCGA 1 cut(s) 181
TatI WGTACW 2 cut(s) 2970, 2986
TauI GCSGC 2 cut(s) 908, 1199
TfiI GAWTC 8 cut(s) 1439, 1558, 1630, 2038, 2147, 2180, 2879, 3203
Tru1I TTAA 7 cut(s) 518, 837, 887, 984, 1739, 2427, 3258
Tru9I TTAA 7 cut(s) 518, 837, 887, 984, 1739, 2427, 3258
TseFI GTSAC 3 cut(s) 969, 1927, 3241
TseI GCWGC 3 cut(s) 83, 1111, 1902
Tsp45I GTSAC 3 cut(s) 969, 1927, 3241
TspDTI ATGAA 8 cut(s) 26, 980, 1147, 1626, 1965, 2537, 3133, 3236
Van91I CCANNNNNTGG 2 cut(s) 798, 2933
VpaK11BI GGWCC 7 cut(s) 177, 632, 779, 1526, 1728, 1817, 2123
XapI RAATTY 9 cut(s) 564, 842, 1339, 1573, 1741, 2080, 2109, 2388, 2574
XbaI TCTAGA 1 cut(s) 2050
XceI RCATGY 4 cut(s) 1024, 2195, 2653, 2840
XcmI CCANNNNNNNNNTGG 2 cut(s) 795, 1761
XmaJI CCTAGG 1 cut(s) 2866
XmnI GAANNNNTTC 3 cut(s) 732, 2389, 2950
Zsp2I ATGCAT 2 cut(s) 6, 894
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.