Rh1AG107200

SNF2 domain-containing protein CLASSY

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0018957
Physical Location & Seq
Reverse (-)
18588923 .. 18595659
6737 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG107200.1

Sequence Viewer

Length: 1773 bp
ATGGTAAGGAATTCTCGTCGTCTCCTTCTGACTTGTGAAAAAGAGAGCGTCACTCTGAGAGAGTGTTCTCACCAGAGCAAGAACGACTGCTTTGTCAGGCTCAAACACCCAAATATTCGTATTCCAAGAGGCGTTAGAGGCCGAAATTATCTTCTGATAGAAATTTTTGGGATAGATCTGTCAACTCTGAAAATGACAATGGTGGATATGGAAGTGTTGCCACTTGCCAAGGACATGAAGGAATTTCTTTCTTGGACACAACAAATACTACACCCTTTGTTTGCAAAATTCCCACCACTATCAACGGATGAGGAACATAGTGAAGATCAAAGGCCTTCTTACTCTTTCCAGGAGGTTTTTATGATACAACCATCTGAACAAGTGTTCAGGAAGGACTTCAGGGTGAGGAACTGTGATGAGAACAAAGTTTCAGTAGGAGAAGCTAGTCCTTCTGCTAAAAAAGATGATGAAAGTACTGAAGAAGATGATGACTTGGGAGATGCATGGACGGAAATGTCAATGGCATTAGAATCTTCGAAGGATGTTGCCGTAGATCCTTCGTCTGAACAAAAGACAAGTGAAGGTGGGGAGGACTGTGACTGTGAGCATTCTTTTCTCTTGAAGGATTATCTTGGATATGTTTGCCGCATCTGTGGGGTTATTGAAAGAGGAATTGATATGATATTCGAGTTTCAATATAACAAGGTCAAAAAGAGTACAAGAACTTGTATGCCCGATACTCGGAATGCCAAAGACAGAGATTTGACTGAGGTGGGAGGTGTTAAACTTTCAGAGGATGACCCAAATGCTAGACTACTGGTTGTTCCACCCAAAGGAATCATGGATACATGGAAAAAGGAGTTTAAATATTGGCAAGTGGAGGATATTCCACTATTTGATTTGTACAAGTCCAAGGCAGACAATCGATCACAACAGCTGGAGGTTTTGAAGAAGTGGGTCGATCAGAAGAGTATCCTCTTCTTAGGGTACAAACAGTTCACCTCTATTGTTTGTGATCGAGAAACTAGCCAGACATCAACATTTTGCCAGGAGATACTGCTTAAGGTACCTTCAATTCTTATTGTGGACGAAGGGCACGCTCCAAGGAATGAGAACACTGATGTATTCCAATCCATCGCAAAATTACAGACGGCTAGGAAAGTCGTACTTTCTGGAACCATTTATCAAAATCATGTAAAGGAAGTATTCAATATTTTGAATCTGGTTTGTCCCAAGTTTCTAAGATCAGATACTTCCCGACCCATCATCAAGCGCATAATGAGTAGAGTACTTATACCAGGTGCAAGGAAGCAGTTCAAAGCTGGTGCTGATAGCTTCTATGATCTAGTGGAGGATACTCTCCAAAAGGACAAGGATTTTAGAAGGAAGGTGACTGTCATACATGACTTGCGTGAGATGACCGACAAGGTCCTTCATTACTATAAAGGAGATTCCCTAAATGAGCTTCCTGGCCTTGTTGATTTTATTGTGGTACTCAATTTAAGTGATTGGCAGAAGCAGAAACTCGCAAAGGAAATGAAGAATGTTAGGAGAAGATGTATAGGTTCTCTAGAGAAGGTAGGTCTTGCCGTCATCATAAGGCTGAGGTACAGAGAAGGGAGAGACGTCACAACTGGTTTTAAACATGCAGCTGTTAACTTTAATCAGTATGGGAATGAATATATCTTAGTACGGGCAGATGAAAATGGTTGTGGCTGGTGGGACTGCAATATGGAGGGGATTGACAATGAAGTAGGTATCAATGAGGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000018 GO:0000166 GO:0000280 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006310 GO:0006311 GO:0006325 GO:0006338 GO:0006342 GO:0006355 GO:0006357 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0015616 GO:0016043 GO:0016458 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0022402 GO:0022414 GO:0030491 GO:0030554 GO:0030702 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032553 GO:0032555 GO:0032559 GO:0033170 GO:0034641 GO:0035639 GO:0035822 GO:0035825 GO:0035861 GO:0036094 GO:0040029 GO:0042623 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0048285 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051321 GO:0060255 GO:0061806 GO:0061982 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090734 GO:0097159 GO:0097367 GO:0140013 GO:0140097 GO:0140110 GO:1901265 GO:1901360 GO:1901363 GO:1902679 GO:1902680 GO:1903046 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

590

Amino Acids

68.06

Weight (kDa)

6.06

Isoelectric Point (pI)

39.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNF2-rel_dom PF00176 264 - 506 7.4e-16 SNF2-related domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018957)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0330471
rosa_laevigata RLG00000029807 RLG00000029808
rosa_multiflora Rmu_sc0000815.1_g000008
rosa_samantha Rh1AG107200 Rh1BG085400 Rh1CG103100 Rh1DG112800
rosa_wichuraiana Rw1G008900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 92, 514
AatII GACGTC 1 cut(s) 1629
Acc65I GGTACC 1 cut(s) 1066
AccB1I GGYRCC 1 cut(s) 1066
AciI CCGC 1 cut(s) 646
AclWI GGATC 1 cut(s) 548
AcsI RAATTY 4 cut(s) 10, 162, 242, 287
AcuI CTGAAG 2 cut(s) 382, 498
AcyI GRCGYC 1 cut(s) 1626
AfiI CCNNNNNNNGG 2 cut(s) 741, 833
AflII CTTAAG 1 cut(s) 1061
AgsI TTSAA 8 cut(s) 622, 665, 695, 949, 1074, 1210, 1219, 1318
AjnI CCWGG 4 cut(s) 348, 1047, 1297, 1468
AluBI AGCT 6 cut(s) 443, 937, 1322, 1335, 1465, 1652
AluI AGCT 6 cut(s) 443, 937, 1322, 1335, 1465, 1652
Alw26I GTCTC 2 cut(s) 26, 1617
AlwI GGATC 1 cut(s) 548
AoxI GGCC 3 cut(s) 139, 332, 1471
ApeKI GCWGC 1 cut(s) 1649
ApoI RAATTY 4 cut(s) 10, 162, 242, 287
Asp700I GAANNNNTTC 2 cut(s) 395, 1313
Asp718I GGTACC 1 cut(s) 1066
AspLEI GCGC 1 cut(s) 1275
AspS9I GGNCC 1 cut(s) 1429
AsuHPI GGTGA 4 cut(s) 62, 415, 991, 1402
AsuII TTCGAA 1 cut(s) 536
AvaII GGWCC 1 cut(s) 1429
BaeGI GKGCMC 1 cut(s) 1098
BanI GGYRCC 1 cut(s) 1066
BbvCI CCTCAGC 1 cut(s) 1604
BbvI GCAGC 1 cut(s) 1661
BccI CCATC 3 cut(s) 379, 1142, 1271
BceAI ACGGC 3 cut(s) 533, 1167, 1574
BciT130I CCWGG 4 cut(s) 350, 1049, 1299, 1470
BciVI GTATCC 3 cut(s) 838, 983, 1348
BcoDI GTCTC 2 cut(s) 26, 1617
BfaI CTAG 6 cut(s) 444, 810, 1026, 1155, 1346, 1571
BfrI CTTAAG 1 cut(s) 1061
BfuI GTATCC 3 cut(s) 838, 983, 1348
BglII AGATCT 1 cut(s) 175
BisI GCNGC 2 cut(s) 646, 1650
BlsI GCNGC 2 cut(s) 647, 1651
BmcAI AGTACT 2 cut(s) 475, 1290
Bme1390I CCNGG 4 cut(s) 350, 1049, 1299, 1470
Bme18I GGWCC 1 cut(s) 1429
BmgT120I GGNCC 1 cut(s) 1429
BmiI GGNNCC 2 cut(s) 1068, 1177
BmrFI CCNGG 4 cut(s) 350, 1049, 1299, 1470
BmsI GCATC 2 cut(s) 490, 657
BplI GAGNNNNNCTC 2 cut(s) 37, 69
BpmI CTGGAG 1 cut(s) 959
Bpu10I CCTNAGC 1 cut(s) 1604
Bpu14I TTCGAA 1 cut(s) 536
Bsa29I ATCGAT 1 cut(s) 925
BsaHI GRCGYC 1 cut(s) 1626
BsaJI CCNNGG 3 cut(s) 228, 912, 1103
BsaXI ACNNNNNCTCC 2 cut(s) 1543, 1573
Bsc4I CCNNNNNNNGG 2 cut(s) 741, 833
Bse1I ACTGG 2 cut(s) 822, 1639
BseBI CCWGG 4 cut(s) 350, 1049, 1299, 1470
BseCI ATCGAT 1 cut(s) 925
BseDI CCNNGG 3 cut(s) 228, 912, 1103
BseGI GGATG 3 cut(s) 313, 547, 802
BseLI CCNNNNNNNGG 2 cut(s) 741, 833
BseMII CTCAG 3 cut(s) 47, 759, 1595
BseNI ACTGG 2 cut(s) 822, 1639
BseSI GKGCMC 1 cut(s) 1098
BseXI GCAGC 1 cut(s) 1661
BshFI GGCC 3 cut(s) 141, 334, 1473
BshNI GGYRCC 1 cut(s) 1066
BshVI ATCGAT 1 cut(s) 925
BslFI GGGAC 2 cut(s) 1215, 1736
BslI CCNNNNNNNGG 2 cut(s) 741, 833
BsmAI GTCTC 2 cut(s) 26, 1617
BsmBI CGTCTC 2 cut(s) 26, 1617
BsmFI GGGAC 2 cut(s) 1215, 1736
BsmI GAATGC 2 cut(s) 607, 751
BsnI GGCC 3 cut(s) 141, 334, 1473
Bsp119I TTCGAA 1 cut(s) 536
Bsp1286I GDGCHC 1 cut(s) 1098
Bsp1407I TGTACA 1 cut(s) 903
Bsp143I GATC 8 cut(s) 175, 325, 553, 926, 961, 1015, 1244, 1342
BspACI CCGC 1 cut(s) 646
BspANI GGCC 3 cut(s) 141, 334, 1473
BspCNI CTCAG 3 cut(s) 48, 760, 1596
BspDI ATCGAT 1 cut(s) 925
BspLI GGNNCC 2 cut(s) 1068, 1177
BspPI GGATC 1 cut(s) 548
BspT104I TTCGAA 1 cut(s) 536
BspT107I GGYRCC 1 cut(s) 1066
BspTI CTTAAG 1 cut(s) 1061
BsrGI TGTACA 1 cut(s) 903
BsrI ACTGG 2 cut(s) 822, 1639
BssECI CCNNGG 3 cut(s) 228, 912, 1103
BssMI GATC 8 cut(s) 175, 325, 553, 926, 961, 1015, 1244, 1342
BssNI GRCGYC 1 cut(s) 1626
BssT1I CCWWGG 3 cut(s) 228, 912, 1103
Bst2UI CCWGG 4 cut(s) 350, 1049, 1299, 1470
Bst4CI ACNGT 5 cut(s) 413, 596, 602, 996, 1396
Bst6I CTCTTC 2 cut(s) 962, 983
BstACI GRCGYC 1 cut(s) 1626
BstAFI CTTAAG 1 cut(s) 1061
BstAUI TGTACA 1 cut(s) 903
BstBI TTCGAA 1 cut(s) 536
BstC8I GCNNGC 1 cut(s) 1098
BstDEI CTNAG 6 cut(s) 56, 768, 982, 1241, 1604, 1687
BstF5I GGATG 3 cut(s) 313, 547, 802
BstHHI GCGC 1 cut(s) 1275
BstKTI GATC 8 cut(s) 178, 328, 556, 929, 964, 1018, 1247, 1345
BstMAI GTCTC 2 cut(s) 26, 1617
BstMBI GATC 8 cut(s) 175, 325, 553, 926, 961, 1015, 1244, 1342
BstMWI GCNNNNNNNGC 1 cut(s) 138
BstNI CCWGG 4 cut(s) 350, 1049, 1299, 1470
BstNSI RCATGY 1 cut(s) 1649
BstSCI CCNGG 4 cut(s) 348, 1047, 1297, 1468
BstSLI GKGCMC 1 cut(s) 1098
BstV1I GCAGC 1 cut(s) 1661
BstX2I RGATCY 2 cut(s) 175, 553
BstYI RGATCY 2 cut(s) 175, 553
Bsu15I ATCGAT 1 cut(s) 925
BsuI GTATCC 3 cut(s) 838, 983, 1348
BsuRI GGCC 3 cut(s) 141, 334, 1473
BsuTUI ATCGAT 1 cut(s) 925
BtgZI GCGATG 1 cut(s) 1120
BtsCI GGATG 3 cut(s) 313, 547, 802
BtsIMutI CAGTG 1 cut(s) 1116
Cac8I GCNNGC 1 cut(s) 1098
CfoI GCGC 1 cut(s) 1275
Cfr13I GGNCC 1 cut(s) 1429
ClaI ATCGAT 1 cut(s) 925
CseI GACGC 1 cut(s) 37
CsiI ACCWGGT 1 cut(s) 1297
CviAII CATG 7 cut(s) 235, 504, 841, 849, 1193, 1403, 1646
DdeI CTNAG 6 cut(s) 56, 768, 982, 1241, 1604, 1687
DpnI GATC 8 cut(s) 177, 327, 555, 928, 963, 1017, 1246, 1344
DpnII GATC 8 cut(s) 175, 325, 553, 926, 961, 1015, 1244, 1342
DraI TTTAAA 2 cut(s) 865, 1642
DrdI GACNNNNNNGTC 2 cut(s) 92, 514
DseDI GACNNNNNNGTC 2 cut(s) 92, 514
Eam1104I CTCTTC 2 cut(s) 962, 983
EarI CTCTTC 2 cut(s) 962, 983
Eco130I CCWWGG 3 cut(s) 228, 912, 1103
Eco147I AGGCCT 1 cut(s) 334
Eco47I GGWCC 1 cut(s) 1429
Eco57I CTGAAG 2 cut(s) 382, 498
EcoO109I RGGNCCY 1 cut(s) 1429
EcoRI GAATTC 1 cut(s) 10
EcoRII CCWGG 4 cut(s) 348, 1047, 1297, 1468
EcoT14I CCWWGG 3 cut(s) 228, 912, 1103
EcoT22I ATGCAT 1 cut(s) 505
ErhI CCWWGG 3 cut(s) 228, 912, 1103
Esp3I CGTCTC 2 cut(s) 26, 1617
FaeI CATG 7 cut(s) 238, 507, 844, 852, 1196, 1406, 1649
FalI AAGNNNNNCTT 4 cut(s) 322, 354, 1152, 1184
FaqI GGGAC 2 cut(s) 1215, 1736
FatI CATG 7 cut(s) 234, 503, 840, 848, 1192, 1402, 1645
Fnu4HI GCNGC 2 cut(s) 646, 1650
FokI GGATG 3 cut(s) 320, 554, 809
Fsp4HI GCNGC 2 cut(s) 646, 1650
FspBI CTAG 6 cut(s) 444, 810, 1026, 1155, 1346, 1571
GlaI GCGC 1 cut(s) 1274
GluI GCNGC 2 cut(s) 646, 1650
GsuI CTGGAG 1 cut(s) 959
HaeIII GGCC 3 cut(s) 141, 334, 1473
HgaI GACGC 1 cut(s) 37
HhaI GCGC 1 cut(s) 1275
Hin1I GRCGYC 1 cut(s) 1626
Hin1II CATG 7 cut(s) 238, 507, 844, 852, 1196, 1406, 1649
Hin6I GCGC 1 cut(s) 1273
HinP1I GCGC 1 cut(s) 1273
HincII GTYRAC 2 cut(s) 183, 1657
HindII GTYRAC 2 cut(s) 183, 1657
HinfI GANTC 4 cut(s) 530, 837, 1219, 1451
HpaI GTTAAC 1 cut(s) 1657
HphI GGTGA 4 cut(s) 62, 415, 991, 1402
Hpy166II GTNNAC 4 cut(s) 183, 999, 1087, 1657
Hpy188III TCNNGA 6 cut(s) 388, 619, 1019, 1173, 1257, 1571
Hpy8I GTNNAC 4 cut(s) 183, 999, 1087, 1657
Hpy99I CGWCG 1 cut(s) 21
HpyCH4III ACNGT 5 cut(s) 413, 596, 602, 996, 1396
HpyCH4IV ACGT 1 cut(s) 1626
HpyCH4V TGCA 5 cut(s) 284, 503, 1304, 1649, 1728
HpyF10VI GCNNNNNNNGC 1 cut(s) 138
HpyF3I CTNAG 6 cut(s) 56, 768, 982, 1241, 1604, 1687
HpySE526I ACGT 1 cut(s) 1626
Hsp92I GRCGYC 1 cut(s) 1626
Hsp92II CATG 7 cut(s) 238, 507, 844, 852, 1196, 1406, 1649
HspAI GCGC 1 cut(s) 1273
KpnI GGTACC 1 cut(s) 1070
KspAI GTTAAC 1 cut(s) 1657
Kzo9I GATC 8 cut(s) 175, 325, 553, 926, 961, 1015, 1244, 1342
LmnI GCTCC 1 cut(s) 1105
Lsp1109I GCAGC 1 cut(s) 1661
LweI GCATC 2 cut(s) 490, 657
MabI ACCWGGT 1 cut(s) 1297
MaeI CTAG 6 cut(s) 444, 810, 1026, 1155, 1346, 1571
MaeII ACGT 1 cut(s) 1626
MaeIII GTNAC 4 cut(s) 49, 596, 1390, 1627
MalI GATC 8 cut(s) 177, 327, 555, 928, 963, 1017, 1246, 1344
MboI GATC 8 cut(s) 175, 325, 553, 926, 961, 1015, 1244, 1342
MflI RGATCY 2 cut(s) 175, 553
MhlI GDGCHC 1 cut(s) 1098
MluCI AATT 9 cut(s) 10, 145, 162, 242, 287, 672, 1074, 1142, 1498
Mph1103I ATGCAT 1 cut(s) 505
MroXI GAANNNNTTC 2 cut(s) 395, 1313
MseI TTAA 7 cut(s) 783, 864, 1062, 1502, 1641, 1656, 1662
MspA1I CMGCKG 2 cut(s) 937, 1652
MspCI CTTAAG 1 cut(s) 1061
MspR9I CCNGG 4 cut(s) 350, 1049, 1299, 1470
Mva1269I GAATGC 2 cut(s) 607, 751
MvaI CCWGG 4 cut(s) 350, 1049, 1299, 1470
MwoI GCNNNNNNNGC 1 cut(s) 138
NdeII GATC 8 cut(s) 175, 325, 553, 926, 961, 1015, 1244, 1342
NlaIII CATG 7 cut(s) 238, 507, 844, 852, 1196, 1406, 1649
NlaIV GGNNCC 2 cut(s) 1068, 1177
NmuCI GTSAC 4 cut(s) 49, 596, 1390, 1627
NsiI ATGCAT 1 cut(s) 505
NspI RCATGY 1 cut(s) 1649
NspV TTCGAA 1 cut(s) 536
PceI AGGCCT 1 cut(s) 334
PctI GAATGC 2 cut(s) 607, 751
PdmI GAANNNNTTC 2 cut(s) 395, 1313
PfeI GAWTC 4 cut(s) 530, 837, 1219, 1451
PflFI GACNNNGTC 1 cut(s) 1427
PfoI TCCNGGA 1 cut(s) 348
PkrI GCNGC 2 cut(s) 647, 1651
PpuMI RGGWCCY 1 cut(s) 1429
Psp5II RGGWCCY 1 cut(s) 1429
Psp6I CCWGG 4 cut(s) 348, 1047, 1297, 1468
PspGI CCWGG 4 cut(s) 348, 1047, 1297, 1468
PspN4I GGNNCC 2 cut(s) 1068, 1177
PspPI GGNCC 1 cut(s) 1429
PspPPI RGGWCCY 1 cut(s) 1429
PsrI GAACNNNNNNTAC 2 cut(s) 980, 1012
PsuI RGATCY 2 cut(s) 175, 553
PsyI GACNNNGTC 1 cut(s) 1427
PvuII CAGCTG 2 cut(s) 937, 1652
SaqAI TTAA 7 cut(s) 783, 864, 1062, 1502, 1641, 1656, 1662
SatI GCNGC 2 cut(s) 646, 1650
Sau3AI GATC 8 cut(s) 175, 325, 553, 926, 961, 1015, 1244, 1342
Sau96I GGNCC 1 cut(s) 1429
ScaI AGTACT 2 cut(s) 475, 1290
ScrFI CCNGG 4 cut(s) 350, 1049, 1299, 1470
SduI GDGCHC 1 cut(s) 1098
SexAI ACCWGGT 1 cut(s) 1297
SfaNI GCATC 2 cut(s) 490, 657
SfuI TTCGAA 1 cut(s) 536
SinI GGWCC 1 cut(s) 1429
SmlI CTYRAG 1 cut(s) 1061
SmoI CTYRAG 1 cut(s) 1061
Sse9I AATT 9 cut(s) 10, 145, 162, 242, 287, 672, 1074, 1142, 1498
SseBI AGGCCT 1 cut(s) 334
SsiI CCGC 1 cut(s) 646
SspI AATATT 3 cut(s) 115, 869, 1213
SspMI CTAG 6 cut(s) 444, 810, 1026, 1155, 1346, 1571
StuI AGGCCT 1 cut(s) 334
StyD4I CCNGG 4 cut(s) 348, 1047, 1297, 1468
StyI CCWWGG 3 cut(s) 228, 912, 1103
TaaI ACNGT 5 cut(s) 413, 596, 602, 996, 1396
TaiI ACGT 1 cut(s) 1629
TaqI TCGA 5 cut(s) 536, 687, 925, 960, 1018
TaqII GACCGA 1 cut(s) 1436
TasI AATT 9 cut(s) 10, 145, 162, 242, 287, 672, 1074, 1142, 1498
TatI WGTACW 4 cut(s) 473, 716, 903, 1288
TauI GCSGC 1 cut(s) 648
TfiI GAWTC 4 cut(s) 530, 837, 1219, 1451
Tru1I TTAA 7 cut(s) 783, 864, 1062, 1502, 1641, 1656, 1662
Tru9I TTAA 7 cut(s) 783, 864, 1062, 1502, 1641, 1656, 1662
TscAI CASTG 1 cut(s) 1123
TseFI GTSAC 4 cut(s) 49, 596, 1390, 1627
TseI GCWGC 1 cut(s) 1649
Tsp45I GTSAC 4 cut(s) 49, 596, 1390, 1627
TspDTI ATGAA 7 cut(s) 251, 483, 1424, 1553, 1692, 1716, 1764
TspGWI ACGGA 2 cut(s) 320, 524
TspRI CASTG 1 cut(s) 1123
Tth111I GACNNNGTC 1 cut(s) 1427
Vha464I CTTAAG 1 cut(s) 1061
VpaK11BI GGWCC 1 cut(s) 1429
XapI RAATTY 4 cut(s) 10, 162, 242, 287
XbaI TCTAGA 1 cut(s) 1570
XceI RCATGY 1 cut(s) 1649
XcmI CCANNNNNNNNNTGG 1 cut(s) 838
XmnI GAANNNNTTC 2 cut(s) 395, 1313
XspI CTAG 6 cut(s) 444, 810, 1026, 1155, 1346, 1571
ZraI GACGTC 1 cut(s) 1627
ZrmI AGTACT 2 cut(s) 475, 1290
Zsp2I ATGCAT 1 cut(s) 505
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.