Protein present in Fab1, YOTB, Vac1, and EEA1
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0371221 |
| rosa_multiflora | Rmu_co8204492.1_g000001 Rmu_sc0001978.1_g000001 Rmu_sc0002083.1_g000006 |
| rosa_rugosa | Rorug06G0481900 Rorug06G0482000 Rorug06G0482000 |
| rosa_samantha | Rh1AG372400 Rh1BG049000 Rh7BG088000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 168 |
| AgsI | TTSAA | 2 cut(s) | 13, 63 |
| AluBI | AGCT | 1 cut(s) | 101 |
| AluI | AGCT | 1 cut(s) | 101 |
| Alw26I | GTCTC | 1 cut(s) | 224 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 191, 222, 244 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 81 |
| BccI | CCATC | 1 cut(s) | 117 |
| BcoDI | GTCTC | 1 cut(s) | 224 |
| BfmI | CTRYAG | 1 cut(s) | 96 |
| BmiI | GGNNCC | 1 cut(s) | 78 |
| BmsI | GCATC | 1 cut(s) | 133 |
| Bse3DI | GCAATG | 1 cut(s) | 203 |
| BseGI | GGATG | 3 cut(s) | 73, 85, 109 |
| BseMI | GCAATG | 1 cut(s) | 203 |
| BseMII | CTCAG | 1 cut(s) | 251 |
| BsmAI | GTCTC | 1 cut(s) | 224 |
| Bsp143I | GATC | 2 cut(s) | 22, 39 |
| BspCNI | CTCAG | 1 cut(s) | 250 |
| BspLI | GGNNCC | 1 cut(s) | 78 |
| BsrDI | GCAATG | 1 cut(s) | 203 |
| BssMI | GATC | 2 cut(s) | 22, 39 |
| BstC8I | GCNNGC | 1 cut(s) | 31 |
| BstDEI | CTNAG | 1 cut(s) | 237 |
| BstF5I | GGATG | 3 cut(s) | 73, 85, 109 |
| BstKTI | GATC | 2 cut(s) | 25, 42 |
| BstMAI | GTCTC | 1 cut(s) | 224 |
| BstMBI | GATC | 2 cut(s) | 22, 39 |
| BstSFI | CTRYAG | 1 cut(s) | 96 |
| BtsCI | GGATG | 3 cut(s) | 73, 85, 109 |
| Cac8I | GCNNGC | 1 cut(s) | 31 |
| CaiI | CAGNNNCTG | 3 cut(s) | 191, 222, 244 |
| CviAII | CATG | 2 cut(s) | 92, 148 |
| CviJI | RGCY | 6 cut(s) | 101, 108, 134, 201, 236, 254 |
| CviKI_1 | RGCY | 6 cut(s) | 101, 108, 134, 201, 236, 254 |
| DdeI | CTNAG | 1 cut(s) | 237 |
| DpnI | GATC | 2 cut(s) | 24, 41 |
| DpnII | GATC | 2 cut(s) | 22, 39 |
| Eco57I | CTGAAG | 1 cut(s) | 168 |
| FaeI | CATG | 2 cut(s) | 95, 151 |
| FaiI | YATR | 4 cut(s) | 93, 149, 154, 156 |
| FatI | CATG | 2 cut(s) | 91, 147 |
| FokI | GGATG | 3 cut(s) | 72, 80, 96 |
| Hin1II | CATG | 2 cut(s) | 95, 151 |
| HinfI | GANTC | 3 cut(s) | 47, 188, 241 |
| Hpy188I | TCNGA | 4 cut(s) | 142, 168, 187, 240 |
| Hpy188III | TCNNGA | 1 cut(s) | 230 |
| HpyAV | CCTTC | 4 cut(s) | 7, 61, 124, 192 |
| HpyCH4V | TGCA | 1 cut(s) | 29 |
| HpyF3I | CTNAG | 1 cut(s) | 237 |
| Hsp92II | CATG | 2 cut(s) | 95, 151 |
| Kzo9I | GATC | 2 cut(s) | 22, 39 |
| LpnPI | CCDG | 3 cut(s) | 183, 215, 236 |
| LweI | GCATC | 1 cut(s) | 133 |
| MalI | GATC | 2 cut(s) | 24, 41 |
| MboI | GATC | 2 cut(s) | 22, 39 |
| MboII | GAAGA | 1 cut(s) | 51 |
| MnlI | CCTC | 5 cut(s) | 99, 170, 174, 219, 226 |
| MroXI | GAANNNNTTC | 1 cut(s) | 81 |
| MslI | CAYNNNNRTG | 1 cut(s) | 90 |
| MspA1I | CMGCKG | 1 cut(s) | 101 |
| NdeII | GATC | 2 cut(s) | 22, 39 |
| NlaIII | CATG | 2 cut(s) | 95, 151 |
| NlaIV | GGNNCC | 1 cut(s) | 78 |
| PdmI | GAANNNNTTC | 1 cut(s) | 81 |
| PfeI | GAWTC | 3 cut(s) | 47, 188, 241 |
| PspN4I | GGNNCC | 1 cut(s) | 78 |
| PstNI | CAGNNNCTG | 3 cut(s) | 191, 222, 244 |
| PvuII | CAGCTG | 1 cut(s) | 101 |
| RseI | CAYNNNNRTG | 1 cut(s) | 90 |
| Sau3AI | GATC | 2 cut(s) | 22, 39 |
| SetI | ASST | 2 cut(s) | 18, 103 |
| SfaNI | GCATC | 1 cut(s) | 133 |
| SfcI | CTRYAG | 1 cut(s) | 96 |
| SgeI | CNNG | 6 cut(s) | 38, 42, 104, 160, 210, 242 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 90 |
| TfiI | GAWTC | 3 cut(s) | 47, 188, 241 |
| TspDTI | ATGAA | 2 cut(s) | 74, 84 |
| XmnI | GAANNNNTTC | 1 cut(s) | 81 |