Rh2AG225500

Flavin containing amine oxidoreductase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
23844434 .. 23860293
15860 bp
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UTR
Exon/CDS
Intron
Rh2AG225500.1

Sequence Viewer

Length: 288 bp
ATGACAGGTAAAGGTGTATTGTGTTGTGCTGGGCTATTAGCTAGGTACCAGCAAGATGTTCTTGTCTTAGAGAGTCATGATCTACCTGGCGGTGTTGCTCATTCATTTGAGATTAAAGGATTTCAATTTGACTCCGGCCCATCTTTGTTCTCTGGTTTTCAATTAAAAGGCCCTCAGGCCAATCCTCTTGGACAAGCCGGTGAGCTTATCAAGAGGTACGTTGAGGATGGGAATTGCGAGGATGCGATAGTATTTATGTTAAGTTGCTTGAACTTGGTTTGTCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

95

Amino Acids

10.18

Weight (kDa)

4.85

Isoelectric Point (pI)

29.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_8 PF13450 7 - 53 1.2e-09 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 7 - 56 8.2e-06 Flavin containing amine oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018987)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 45
AccB1I GGYRCC 1 cut(s) 45
AciI CCGC 1 cut(s) 90
AfaI GTAC 2 cut(s) 47, 218
AgsI TTSAA 3 cut(s) 125, 161, 271
AjnI CCWGG 1 cut(s) 85
AluBI AGCT 2 cut(s) 41, 205
AluI AGCT 2 cut(s) 41, 205
AoxI GGCC 3 cut(s) 136, 169, 177
Asp718I GGTACC 1 cut(s) 45
AspS9I GGNCC 2 cut(s) 137, 170
AsuHPI GGTGA 1 cut(s) 212
AxyI CCTNAGG 1 cut(s) 174
BanI GGYRCC 1 cut(s) 45
BccI CCATC 2 cut(s) 148, 221
BciT130I CCWGG 1 cut(s) 87
BfaI CTAG 1 cut(s) 42
BfmI CTRYAG 1 cut(s) 284
Bme1390I CCNGG 1 cut(s) 87
BmgT120I GGNCC 2 cut(s) 137, 170
BmiI GGNNCC 1 cut(s) 47
BmrFI CCNGG 1 cut(s) 87
BmsI GCATC 1 cut(s) 232
Bse118I RCCGGY 1 cut(s) 197
Bse21I CCTNAGG 1 cut(s) 174
BseBI CCWGG 1 cut(s) 87
BseGI GGATG 2 cut(s) 232, 247
BseMII CTCAG 1 cut(s) 188
BseYI CCCAGC 1 cut(s) 29
BshFI GGCC 3 cut(s) 138, 171, 179
BshNI GGYRCC 1 cut(s) 45
BsiSI CCGG 2 cut(s) 135, 198
BsnI GGCC 3 cut(s) 138, 171, 179
Bsp143I GATC 1 cut(s) 79
BspACI CCGC 1 cut(s) 90
BspANI GGCC 3 cut(s) 138, 171, 179
BspCNI CTCAG 1 cut(s) 187
BspHI TCATGA 1 cut(s) 76
BspLI GGNNCC 1 cut(s) 47
BspT107I GGYRCC 1 cut(s) 45
BsrFI RCCGGY 1 cut(s) 197
BssAI RCCGGY 1 cut(s) 197
BssMI GATC 1 cut(s) 79
Bst2UI CCWGG 1 cut(s) 87
BstDEI CTNAG 2 cut(s) 67, 174
BstF5I GGATG 2 cut(s) 232, 247
BstKTI GATC 1 cut(s) 82
BstMBI GATC 1 cut(s) 79
BstNI CCWGG 1 cut(s) 87
BstSCI CCNGG 1 cut(s) 85
BstSFI CTRYAG 1 cut(s) 284
Bsu36I CCTNAGG 1 cut(s) 174
BsuRI GGCC 3 cut(s) 138, 171, 179
BtsCI GGATG 2 cut(s) 232, 247
CciI TCATGA 1 cut(s) 76
Cfr10I RCCGGY 1 cut(s) 197
Cfr13I GGNCC 2 cut(s) 137, 170
Csp6I GTAC 2 cut(s) 46, 217
CviAII CATG 1 cut(s) 77
CviJI RGCY 7 cut(s) 34, 41, 138, 171, 179, 197, 205
CviKI_1 RGCY 7 cut(s) 34, 41, 138, 171, 179, 197, 205
CviQI GTAC 2 cut(s) 46, 217
DdeI CTNAG 2 cut(s) 67, 174
DpnI GATC 1 cut(s) 81
DpnII GATC 1 cut(s) 79
Eco81I CCTNAGG 1 cut(s) 174
EcoO109I RGGNCCY 1 cut(s) 170
EcoRII CCWGG 1 cut(s) 85
FaeI CATG 1 cut(s) 80
FaiI YATR 2 cut(s) 78, 257
FalI AAGNNNNNCTT 2 cut(s) 45, 77
FatI CATG 1 cut(s) 76
FokI GGATG 2 cut(s) 239, 254
FspBI CTAG 1 cut(s) 42
GsaI CCCAGC 1 cut(s) 33
HaeIII GGCC 3 cut(s) 138, 171, 179
HapII CCGG 2 cut(s) 135, 198
Hin1II CATG 1 cut(s) 80
HinfI GANTC 2 cut(s) 73, 131
HpaII CCGG 2 cut(s) 135, 198
HphI GGTGA 1 cut(s) 212
Hpy188III TCNNGA 2 cut(s) 77, 211
HpyCH4IV ACGT 1 cut(s) 219
HpyF3I CTNAG 2 cut(s) 67, 174
HpySE526I ACGT 1 cut(s) 219
Hsp92II CATG 1 cut(s) 80
KpnI GGTACC 1 cut(s) 49
Kzo9I GATC 1 cut(s) 79
LpnPI CCDG 8 cut(s) 15, 62, 72, 99, 138, 148, 161, 211
LweI GCATC 1 cut(s) 232
MaeI CTAG 1 cut(s) 42
MaeII ACGT 1 cut(s) 219
MalI GATC 1 cut(s) 81
MboI GATC 1 cut(s) 79
MluCI AATT 3 cut(s) 125, 161, 232
MlyI GAGTC 2 cut(s) 82, 125
MnlI CCTC 5 cut(s) 183, 195, 207, 217, 232
MseI TTAA 3 cut(s) 114, 164, 260
MspI CCGG 2 cut(s) 135, 198
MspR9I CCNGG 1 cut(s) 87
MvaI CCWGG 1 cut(s) 87
NdeII GATC 1 cut(s) 79
NlaIII CATG 1 cut(s) 80
NlaIV GGNNCC 1 cut(s) 47
PagI TCATGA 1 cut(s) 76
PleI GAGTC 2 cut(s) 81, 125
PpsI GAGTC 2 cut(s) 81, 125
Psp6I CCWGG 1 cut(s) 85
PspFI CCCAGC 1 cut(s) 29
PspGI CCWGG 1 cut(s) 85
PspN4I GGNNCC 1 cut(s) 47
PspPI GGNCC 2 cut(s) 137, 170
RsaI GTAC 2 cut(s) 47, 218
RsaNI GTAC 2 cut(s) 46, 217
SaqAI TTAA 3 cut(s) 114, 164, 260
Sau3AI GATC 1 cut(s) 79
Sau96I GGNCC 2 cut(s) 137, 170
SchI GAGTC 2 cut(s) 82, 125
ScrFI CCNGG 1 cut(s) 87
SetI ASST 8 cut(s) 10, 16, 43, 47, 88, 207, 218, 222
SfaNI GCATC 1 cut(s) 232
SfcI CTRYAG 1 cut(s) 284
Sse9I AATT 3 cut(s) 125, 161, 232
SsiI CCGC 1 cut(s) 90
SspMI CTAG 1 cut(s) 42
StyD4I CCNGG 1 cut(s) 85
TaiI ACGT 1 cut(s) 222
TasI AATT 3 cut(s) 125, 161, 232
Tru1I TTAA 3 cut(s) 114, 164, 260
Tru9I TTAA 3 cut(s) 114, 164, 260
TspDTI ATGAA 1 cut(s) 93
XspI CTAG 1 cut(s) 42
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.