Rh2BG061600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
4653512 .. 4656392
2881 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG061600.1

Sequence Viewer

Length: 222 bp
ATGGGTCTTTCTCGCTGTGGCTTGGGTCATGGGCGAAGGCAGCCAAAGTGCAGCGAAGGGGTGCGGCTGGCCGGCGGCGATCTCGAACCTCTTTTCTACAACGGGGATGTATGCAGCGGTTGGGCTCTCGATCTCATGGGAGCGATAAGCCAGAAACCACTAAACAAGCTTGATTGGGGTTTCCATCATCTCTCTTCTTCGCATTCAGGACGCACTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

73

Amino Acids

7.88

Weight (kDa)

8.61

Isoelectric Point (pI)

39.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018639)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 64, 75, 117
AcoI YGGCCR 1 cut(s) 69
AluBI AGCT 1 cut(s) 169
AluI AGCT 1 cut(s) 169
AoxI GGCC 1 cut(s) 69
ApeKI GCWGC 3 cut(s) 40, 51, 114
BanII GRGCYC 1 cut(s) 127
BbvI GCAGC 3 cut(s) 52, 63, 126
BccI CCATC 1 cut(s) 192
BisI GCNGC 5 cut(s) 41, 52, 65, 76, 115
BlsI GCNGC 5 cut(s) 42, 53, 66, 77, 116
Bse118I RCCGGY 1 cut(s) 71
BseGI GGATG 1 cut(s) 112
BseXI GCAGC 3 cut(s) 52, 63, 126
BsgI GTGCAG 1 cut(s) 70
BshFI GGCC 1 cut(s) 71
BsiSI CCGG 1 cut(s) 72
BsmI GAATGC 1 cut(s) 202
BsnI GGCC 1 cut(s) 71
Bsp1286I GDGCHC 1 cut(s) 127
Bsp143I GATC 2 cut(s) 79, 130
BspACI CCGC 3 cut(s) 64, 75, 117
BspANI GGCC 1 cut(s) 71
BsrFI RCCGGY 1 cut(s) 71
BssAI RCCGGY 1 cut(s) 71
BssMI GATC 2 cut(s) 79, 130
Bst6I CTCTTC 1 cut(s) 199
BstC8I GCNNGC 2 cut(s) 69, 73
BstF5I GGATG 1 cut(s) 112
BstKTI GATC 2 cut(s) 82, 133
BstMBI GATC 2 cut(s) 79, 130
BstMWI GCNNNNNNNGC 1 cut(s) 40
BstV1I GCAGC 3 cut(s) 52, 63, 126
BsuRI GGCC 1 cut(s) 71
BtsCI GGATG 1 cut(s) 112
Cac8I GCNNGC 2 cut(s) 69, 73
Cfr10I RCCGGY 1 cut(s) 71
CviAII CATG 2 cut(s) 29, 136
CviJI RGCY 7 cut(s) 21, 43, 67, 71, 125, 150, 169
CviKI_1 RGCY 7 cut(s) 21, 43, 67, 71, 125, 150, 169
DpnI GATC 2 cut(s) 81, 132
DpnII GATC 2 cut(s) 79, 130
EaeI YGGCCR 1 cut(s) 69
Eam1104I CTCTTC 1 cut(s) 199
EarI CTCTTC 1 cut(s) 199
Eco24I GRGCYC 1 cut(s) 127
EcoT38I GRGCYC 1 cut(s) 127
FaeI CATG 2 cut(s) 32, 139
FaiI YATR 3 cut(s) 30, 112, 137
FatI CATG 2 cut(s) 28, 135
Fnu4HI GCNGC 5 cut(s) 41, 52, 65, 76, 115
FokI GGATG 1 cut(s) 119
FriOI GRGCYC 1 cut(s) 127
Fsp4HI GCNGC 5 cut(s) 41, 52, 65, 76, 115
GluI GCNGC 5 cut(s) 41, 52, 65, 76, 115
HaeIII GGCC 1 cut(s) 71
HapII CCGG 1 cut(s) 72
Hin1II CATG 2 cut(s) 32, 139
HindIII AAGCTT 1 cut(s) 167
HpaII CCGG 1 cut(s) 72
Hpy188III TCNNGA 3 cut(s) 83, 128, 207
HpyAV CCTTC 2 cut(s) 30, 50
HpyCH4V TGCA 2 cut(s) 51, 114
HpyF10VI GCNNNNNNNGC 1 cut(s) 40
Hsp92II CATG 2 cut(s) 32, 139
KroI GCCGGC 1 cut(s) 71
KroNI GCCGGC 1 cut(s) 73
Kzo9I GATC 2 cut(s) 79, 130
LmnI GCTCC 1 cut(s) 140
LpnPI CCDG 4 cut(s) 53, 85, 164, 192
Lsp1109I GCAGC 3 cut(s) 52, 63, 126
MalI GATC 2 cut(s) 81, 132
MboI GATC 2 cut(s) 79, 130
MboII GAAGA 2 cut(s) 186, 189
MhlI GDGCHC 1 cut(s) 127
MnlI CCTC 1 cut(s) 99
MroNI GCCGGC 1 cut(s) 71
MspA1I CMGCKG 1 cut(s) 117
MspI CCGG 1 cut(s) 72
Mva1269I GAATGC 1 cut(s) 202
MwoI GCNNNNNNNGC 1 cut(s) 40
NaeI GCCGGC 1 cut(s) 73
NdeII GATC 2 cut(s) 79, 130
NgoMIV GCCGGC 1 cut(s) 71
NlaIII CATG 2 cut(s) 32, 139
PctI GAATGC 1 cut(s) 202
PdiI GCCGGC 1 cut(s) 73
PkrI GCNGC 5 cut(s) 42, 53, 66, 77, 116
SatI GCNGC 5 cut(s) 41, 52, 65, 76, 115
Sau3AI GATC 2 cut(s) 79, 130
SduI GDGCHC 1 cut(s) 127
SetI ASST 2 cut(s) 91, 171
SsiI CCGC 3 cut(s) 64, 75, 117
TaqI TCGA 2 cut(s) 84, 129
TauI GCSGC 2 cut(s) 67, 78
TseI GCWGC 3 cut(s) 40, 51, 114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.