U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g05410 FvH4_7g05450 |
| rosa_chinensis | RchiOBHm_Chr4g0397661 |
| rosa_samantha | Rh2AG371200 Rh2CG359500 Rh2DG382200 Rh4AG079600 Rh4CG085600 Rh4DG072800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 48 |
| AciI | CCGC | 1 cut(s) | 341 |
| AclWI | GGATC | 2 cut(s) | 195, 323 |
| AcoI | YGGCCR | 1 cut(s) | 113 |
| AcsI | RAATTY | 1 cut(s) | 250 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 191, 347 |
| AluBI | AGCT | 4 cut(s) | 62, 145, 149, 360 |
| AluI | AGCT | 4 cut(s) | 62, 145, 149, 360 |
| Alw21I | GWGCWC | 1 cut(s) | 163 |
| AlwI | GGATC | 2 cut(s) | 195, 323 |
| AoxI | GGCC | 1 cut(s) | 113 |
| ApoI | RAATTY | 1 cut(s) | 250 |
| AsuHPI | GGTGA | 1 cut(s) | 21 |
| AsuNHI | GCTAGC | 1 cut(s) | 145 |
| BalI | TGGCCA | 1 cut(s) | 115 |
| Bbv12I | GWGCWC | 1 cut(s) | 163 |
| BclI | TGATCA | 1 cut(s) | 321 |
| BfaI | CTAG | 2 cut(s) | 146, 361 |
| BmsI | GCATC | 1 cut(s) | 78 |
| BmtI | GCTAGC | 1 cut(s) | 149 |
| BsaBI | GATNNNNATC | 1 cut(s) | 333 |
| BsaWI | WCCGGW | 1 cut(s) | 184 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 191, 347 |
| Bse1I | ACTGG | 2 cut(s) | 116, 116 |
| Bse8I | GATNNNNATC | 1 cut(s) | 333 |
| BseJI | GATNNNNATC | 1 cut(s) | 333 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 191, 347 |
| BseMII | CTCAG | 1 cut(s) | 201 |
| BseNI | ACTGG | 2 cut(s) | 116, 116 |
| BshFI | GGCC | 1 cut(s) | 115 |
| BsiHKAI | GWGCWC | 1 cut(s) | 163 |
| BsiSI | CCGG | 1 cut(s) | 185 |
| BslFI | GGGAC | 1 cut(s) | 88 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 191, 347 |
| BsmFI | GGGAC | 1 cut(s) | 88 |
| BsmI | GAATGC | 2 cut(s) | 230, 343 |
| BsnI | GGCC | 1 cut(s) | 115 |
| Bsp1286I | GDGCHC | 1 cut(s) | 163 |
| Bsp143I | GATC | 3 cut(s) | 187, 321, 328 |
| BspACI | CCGC | 1 cut(s) | 341 |
| BspANI | GGCC | 1 cut(s) | 115 |
| BspCNI | CTCAG | 1 cut(s) | 202 |
| BspOI | GCTAGC | 1 cut(s) | 149 |
| BspPI | GGATC | 2 cut(s) | 195, 323 |
| BsrI | ACTGG | 2 cut(s) | 116, 116 |
| BssMI | GATC | 3 cut(s) | 187, 321, 328 |
| Bst4CI | ACNGT | 1 cut(s) | 156 |
| BstC8I | GCNNGC | 1 cut(s) | 147 |
| BstDEI | CTNAG | 3 cut(s) | 84, 130, 210 |
| BstKTI | GATC | 3 cut(s) | 190, 324, 331 |
| BstMBI | GATC | 3 cut(s) | 187, 321, 328 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 146 |
| BstX2I | RGATCY | 1 cut(s) | 187 |
| BstYI | RGATCY | 1 cut(s) | 187 |
| BsuRI | GGCC | 1 cut(s) | 115 |
| BtsIMutI | CAGTG | 2 cut(s) | 161, 331 |
| Cac8I | GCNNGC | 1 cut(s) | 147 |
| CviAII | CATG | 2 cut(s) | 247, 259 |
| CviJI | RGCY | 6 cut(s) | 23, 62, 115, 145, 149, 360 |
| CviKI_1 | RGCY | 6 cut(s) | 23, 62, 115, 145, 149, 360 |
| DdeI | CTNAG | 3 cut(s) | 84, 130, 210 |
| DpnI | GATC | 3 cut(s) | 189, 323, 330 |
| DpnII | GATC | 3 cut(s) | 187, 321, 328 |
| EaeI | YGGCCR | 1 cut(s) | 113 |
| EcoRI | GAATTC | 1 cut(s) | 250 |
| FaeI | CATG | 2 cut(s) | 250, 262 |
| FaiI | YATR | 4 cut(s) | 48, 248, 260, 354 |
| FaqI | GGGAC | 1 cut(s) | 88 |
| FatI | CATG | 2 cut(s) | 246, 258 |
| FbaI | TGATCA | 1 cut(s) | 321 |
| FspBI | CTAG | 2 cut(s) | 146, 361 |
| HaeIII | GGCC | 1 cut(s) | 115 |
| HapII | CCGG | 1 cut(s) | 185 |
| Hin1II | CATG | 2 cut(s) | 250, 262 |
| HpaII | CCGG | 1 cut(s) | 185 |
| HphI | GGTGA | 1 cut(s) | 21 |
| Hpy188III | TCNNGA | 3 cut(s) | 107, 288, 348 |
| HpyAV | CCTTC | 2 cut(s) | 65, 190 |
| HpyCH4III | ACNGT | 1 cut(s) | 156 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 146 |
| HpyF3I | CTNAG | 3 cut(s) | 84, 130, 210 |
| Hsp92II | CATG | 2 cut(s) | 250, 262 |
| Ksp22I | TGATCA | 1 cut(s) | 321 |
| Kzo9I | GATC | 3 cut(s) | 187, 321, 328 |
| LpnPI | CCDG | 7 cut(s) | 97, 111, 120, 129, 198, 222, 333 |
| LweI | GCATC | 1 cut(s) | 78 |
| MaeI | CTAG | 2 cut(s) | 146, 361 |
| MaeIII | GTNAC | 1 cut(s) | 27 |
| MalI | GATC | 3 cut(s) | 189, 323, 330 |
| MboI | GATC | 3 cut(s) | 187, 321, 328 |
| MboII | GAAGA | 1 cut(s) | 251 |
| MflI | RGATCY | 1 cut(s) | 187 |
| MhlI | GDGCHC | 1 cut(s) | 163 |
| MlsI | TGGCCA | 1 cut(s) | 115 |
| MluCI | AATT | 1 cut(s) | 250 |
| MluNI | TGGCCA | 1 cut(s) | 115 |
| MnlI | CCTC | 1 cut(s) | 115 |
| Mox20I | TGGCCA | 1 cut(s) | 115 |
| MscI | TGGCCA | 1 cut(s) | 115 |
| MseI | TTAA | 2 cut(s) | 66, 216 |
| MslI | CAYNNNNRTG | 1 cut(s) | 86 |
| Msp20I | TGGCCA | 1 cut(s) | 115 |
| MspI | CCGG | 1 cut(s) | 185 |
| Mva1269I | GAATGC | 2 cut(s) | 230, 343 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 146 |
| NdeII | GATC | 3 cut(s) | 187, 321, 328 |
| NheI | GCTAGC | 1 cut(s) | 145 |
| NlaIII | CATG | 2 cut(s) | 250, 262 |
| NmuCI | GTSAC | 1 cut(s) | 27 |
| PctI | GAATGC | 2 cut(s) | 230, 343 |
| PsiI | TTATAA | 1 cut(s) | 48 |
| PsuI | RGATCY | 1 cut(s) | 187 |
| RseI | CAYNNNNRTG | 1 cut(s) | 86 |
| SaqAI | TTAA | 2 cut(s) | 66, 216 |
| Sau3AI | GATC | 3 cut(s) | 187, 321, 328 |
| SduI | GDGCHC | 1 cut(s) | 163 |
| SetI | ASST | 7 cut(s) | 64, 131, 147, 151, 201, 211, 362 |
| SfaNI | GCATC | 1 cut(s) | 78 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 86 |
| Sse9I | AATT | 1 cut(s) | 250 |
| SsiI | CCGC | 1 cut(s) | 341 |
| SspMI | CTAG | 2 cut(s) | 146, 361 |
| TaaI | ACNGT | 1 cut(s) | 156 |
| TasI | AATT | 1 cut(s) | 250 |
| Tru1I | TTAA | 2 cut(s) | 66, 216 |
| Tru9I | TTAA | 2 cut(s) | 66, 216 |
| TscAI | CASTG | 2 cut(s) | 161, 331 |
| TseFI | GTSAC | 1 cut(s) | 27 |
| Tsp45I | GTSAC | 1 cut(s) | 27 |
| TspDTI | ATGAA | 2 cut(s) | 182, 263 |
| TspRI | CASTG | 2 cut(s) | 161, 331 |
| XapI | RAATTY | 1 cut(s) | 250 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 31 |
| XspI | CTAG | 2 cut(s) | 146, 361 |