Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0015461

Physical Location & Seq

Genomic Coordinates Forward (+)

9939338 .. 9942463

Gene Structure 3126 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG119400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGAATGAAAGCAACCGCAAGCTTTTCAATCTTGGGCCTTTGATAACGAGCTTTGCTTTCTCTGCTCTTTGCATACCAAATCTTTCAAGCCTCCGAACCCGACTATCTCGCCCGCGACCCGTCTCCGAAACCCCCCAAATTCCCAATCTGAAACCCTCCAAAAACCCTAACAACTCCAAACTCACAGAGCTTCCACCAAAACCAGAACAACCAGAAATGGGAAAGATGACCCCCTCAGTACGATCACTAGTCTCAACCTCCCTCATCAGAAAGCCACCTTCTTTATCCCCAAACCAATCCCCATCTCATAAACCCCATAACTCTCAGACCCACCTCACCAGAAAAACCCCACCTCAAAATTCCGGCAAAACCCAACTCCAAACCCGGACCAAAAACCCATTCACCTCCCCAAACCTCTCCGACGCCAAAAGGGTCTTCAACTCCATCGCCACCGCAACAAAAACCCCTCTCGATCTTCGCGTCCACAACGCCCTCCTCCAATCCTACGCCGCAATCTCCACCGTCAACGACTCCATCGCTCTCTTCAACCACATGATCAAAACCCAACCCGCATTCTCGCCGGACCGGTCCACCTACCACATCTTGCTCGCCCAGTCCTGCACCGTACCCGATCAGACCCTCCAATCTGTTCACCAAGTCCTCAACTTTATGCTCAACAATGGCTTCCACCCAGATAAGGTCACCACCGACATTGCCGTCCGGTCACTCTGCTTGGCCGGACACGTGGACGAGGCAGTGCAAGTGATGAAGCAAATGTCGTTGAAAAACGCGGTACCGGATACTTATACGTACAATTTTCTTGTCAAGTGTCTCTGCAAGTCGAGAGTTTTGAGTACTGTTAAAGAGTTTATTGACGATATGCGAAAGTCTTTCGATTTGAAGCCGGATTTGGTTACTTATACGATTATGATTGACAATGTAGCTAATAGCAAGAATTTACGTGAGGCTAGCCGATTAGTGAAGGAGTTAGATAAGGAGGGGTTTAAGCCGGATTGCTATGTTTACAATACGATTATGAAAGGCTATTGTATGCTGAGTAAGGGTAATGAGGTGGTTCAGGTGTTGAAGGACATGCAGGAGAATGGAGTGGAGCCTGATCTTGTTACATATAATACTCTGATTTTCGGGTTGTCGAAGTGTGGCAGGGTTATGGAGGCGAAGAATTATTTGCGGATCATGGTGGACATGGGGCATTTCCCCAACGAGGTGACTTATACTTCATTGATGAATGGATTGTGTCGGAAGGGGGATGCATTGGGTGCAGTGGCATTGTTGGAGGAGATGCAAGCGCAGGGGTGCAGCCCGAATGAGTGCACCTATAATACCTTGCTTCATGGGTTGTGTAAGGGAAGGTTGTTAGAGAAAGGGCTGGAATTGTATGGACTGATGAAAAAAGATGGGATGAAGCTTGACACGGCTTCGTATAGTACACTTGTGAGGACACTTTGTAGGGCAGGCAGGGTTGCAGACGCTTATGGAGTGTTTGATTATGCAGTTGAGAGTAAGAGCTTAACAAATGTTTCTGCTTACTTGACTTTGGAAAGTACAGTTAAGCAGCTTAAGAAAGCACGACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

532

Amino Acids

59.24

Weight (kDa)

9.33

Isoelectric Point (pI)

35.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	227 - 260	7.5e-06	PPR repeat
PPR_2	PF13041	242 - 280	5.5e-09	PPR repeat family
PPR_3	PF13812	298 - 349	2.1e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	302 - 350	2.7e-11	PPR repeat family
PPR_3	PF13812	325 - 381	2.7e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	340 - 386	1.8e-13	PPR repeat family
PPR_1	PF12854	368 - 400	1.8e-09	PPR repeat
PPR_2	PF13041	372 - 421	7.2e-15	PPR repeat family
PPR_long	PF17177	377 - 507	8.2e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	400 - 452	2.4e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	403 - 436	1.1e-10	PPR repeat
PPR_2	PF13041	407 - 456	3.4e-18	PPR repeat family
PPR	PF01535	410 - 440	2e-07	PPR repeat
PPR_1	PF12854	439 - 470	2.5e-08	PPR repeat
PPR_2	PF13041	445 - 491	1.5e-11	PPR repeat family
PPR	PF01535	446 - 474	7.7e-07	PPR repeat
PPR_1	PF12854	473 - 504	4.5e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17670 AT2G17670
fragaria_vesca	FvH4_1g10671
malus_domestica	MD02G1120600.v1.1
prunus_persica	Prupe.7G178400_v2.0.a1
rosa_laevigata	RLG00000016739
rosa_multiflora	Rmu_co8429607.1_g000001 Rmu_sc0000974.1_g000027 Rmu_sc0008442.1_g000010
rosa_roxburghii	Rroxscaffold_6G00394240
rosa_rugosa	Rorug02G0068500
rosa_samantha	Rh2AG115200 Rh2BG118100 Rh2CG119700 Rh2DG119400
rosa_wichuraiana	Rw2G009000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	716
Acc65I	GGTACC	1 cut(s)	793
AccB1I	GGYRCC	1 cut(s)	793
AccII	CGCG	3 cut(s)	115, 480, 791
AciI	CCGC	7 cut(s)	16, 113, 453, 510, 570, 791, 1192
AclWI	GGATC	1 cut(s)	1202
AcoI	YGGCCR	1 cut(s)	735
AcsI	RAATTY	3 cut(s)	138, 358, 955
AcvI	CACGTG	1 cut(s)	745
AcyI	GRCGYC	1 cut(s)	423
AfaI	GTAC	7 cut(s)	240, 627, 795, 812, 856, 1450, 1567
AfiI	CCNNNNNNNGG	3 cut(s)	218, 697, 1225
AflII	CTTAAG	1 cut(s)	1580
AflIII	ACRYGT	1 cut(s)	742
AgeI	ACCGGT	1 cut(s)	585
AgsI	TTSAA	7 cut(s)	28, 87, 439, 547, 784, 901, 1087
AhlI	ACTAGT	1 cut(s)	247
AjuI	GAANNNNNNNTTGG	6 cut(s)	383, 415, 419, 451, 893, 925
AluBI	AGCT	7 cut(s)	22, 51, 190, 944, 1429, 1530, 1579
AluI	AGCT	7 cut(s)	22, 51, 190, 944, 1429, 1530, 1579
Alw21I	GWGCWC	1 cut(s)	1337
Alw26I	GTCTC	3 cut(s)	127, 256, 836
Alw44I	GTGCAC	1 cut(s)	1333
AlwI	GGATC	1 cut(s)	1202
AoxI	GGCC	2 cut(s)	35, 735
ApaLI	GTGCAC	1 cut(s)	1333
ApeKI	GCWGC	2 cut(s)	1320, 1576
ApoI	RAATTY	3 cut(s)	138, 358, 955
AsiGI	ACCGGT	1 cut(s)	585
Asp718I	GGTACC	1 cut(s)	793
AspLEI	GCGC	1 cut(s)	1312
AspS9I	GGNCC	4 cut(s)	35, 387, 583, 588
AsuC2I	CCSGG	1 cut(s)	385
AsuHPI	GGTGA	5 cut(s)	328, 394, 644, 694, 1240
AsuNHI	GCTAGC	1 cut(s)	968
AvaII	GGWCC	3 cut(s)	387, 583, 588
BaeGI	GKGCMC	1 cut(s)	1337
BanI	GGYRCC	1 cut(s)	793
BbrPI	CACGTG	1 cut(s)	745
BbsI	GAAGAC	1 cut(s)	427
Bbv12I	GWGCWC	1 cut(s)	1337
BbvI	GCAGC	2 cut(s)	1332, 1588
BccI	CCATC	4 cut(s)	310, 452, 542, 1412
BceAI	ACGGC	2 cut(s)	701, 1452
BciVI	GTATCC	1 cut(s)	793
BclI	TGATCA	1 cut(s)	555
BcnI	CCSGG	1 cut(s)	385
BcoDI	GTCTC	3 cut(s)	127, 256, 836
BcuI	ACTAGT	1 cut(s)	247
BfaI	CTAG	2 cut(s)	248, 969
BfrI	CTTAAG	1 cut(s)	1580
BfuI	GTATCC	1 cut(s)	793
BisI	GCNGC	3 cut(s)	510, 1321, 1577
BlsI	GCNGC	3 cut(s)	511, 1322, 1578
BmcAI	AGTACT	1 cut(s)	856
Bme1390I	CCNGG	1 cut(s)	385
Bme18I	GGWCC	3 cut(s)	387, 583, 588
BmgT120I	GGNCC	4 cut(s)	35, 387, 583, 588
BmiI	GGNNCC	2 cut(s)	795, 1113
BmrFI	CCNGG	1 cut(s)	385
BmrI	ACTGGG	1 cut(s)	607
BmsI	GCATC	2 cut(s)	1261, 1293
BmtI	GCTAGC	1 cut(s)	972
BmuI	ACTGGG	1 cut(s)	607
BpiI	GAAGAC	1 cut(s)	427
BpuMI	CCSGG	1 cut(s)	385
BsaAI	YACGTR	3 cut(s)	745, 810, 962
BsaHI	GRCGYC	1 cut(s)	423
BsaWI	WCCGGW	3 cut(s)	585, 720, 796
Bsc4I	CCNNNNNNNGG	3 cut(s)	218, 697, 1225
Bse118I	RCCGGY	1 cut(s)	585
Bse1I	ACTGG	1 cut(s)	613
Bse3DI	GCAATG	1 cut(s)	711
BseGI	GGATG	2 cut(s)	1276, 1428
BseLI	CCNNNNNNNGG	3 cut(s)	218, 697, 1225
BseMI	GCAATG	1 cut(s)	711
BseMII	CTCAG	3 cut(s)	249, 338, 1046
BseNI	ACTGG	1 cut(s)	613
BseRI	GAGGAG	2 cut(s)	485, 1313
BseSI	GKGCMC	1 cut(s)	1337
BseXI	GCAGC	2 cut(s)	1332, 1588
BsgI	GTGCAG	3 cut(s)	604, 1302, 1339
Bsh1236I	CGCG	3 cut(s)	115, 480, 791
BshFI	GGCC	2 cut(s)	37, 737
BshNI	GGYRCC	1 cut(s)	793
BshTI	ACCGGT	1 cut(s)	585
BsiHKAI	GWGCWC	1 cut(s)	1337
BsiSI	CCGG	9 cut(s)	363, 385, 581, 586, 721, 738, 797, 905, 1010
BslI	CCNNNNNNNGG	3 cut(s)	218, 697, 1225
BsmAI	GTCTC	3 cut(s)	127, 256, 836
BsmBI	CGTCTC	1 cut(s)	127
BsmI	GAATGC	1 cut(s)	572
BsnI	GGCC	2 cut(s)	37, 737
Bsp1286I	GDGCHC	1 cut(s)	1337
Bsp143I	GATC	6 cut(s)	242, 472, 555, 631, 1117, 1194
BspACI	CCGC	7 cut(s)	16, 113, 453, 510, 570, 791, 1192
BspANI	GGCC	2 cut(s)	37, 737
BspCNI	CTCAG	3 cut(s)	248, 337, 1047
BspFNI	CGCG	3 cut(s)	115, 480, 791
BspLI	GGNNCC	2 cut(s)	795, 1113
BspOI	GCTAGC	1 cut(s)	972
BspPI	GGATC	1 cut(s)	1202
BspT107I	GGYRCC	1 cut(s)	793
BspTI	CTTAAG	1 cut(s)	1580
BsrDI	GCAATG	1 cut(s)	711
BsrFI	RCCGGY	1 cut(s)	585
BsrI	ACTGG	1 cut(s)	613
BssAI	RCCGGY	1 cut(s)	585
BssMI	GATC	6 cut(s)	242, 472, 555, 631, 1117, 1194
BssNI	GRCGYC	1 cut(s)	423
Bst4CI	ACNGT	4 cut(s)	523, 625, 859, 1570
Bst6I	CTCTTC	1 cut(s)	548
BstACI	GRCGYC	1 cut(s)	423
BstAFI	CTTAAG	1 cut(s)	1580
BstAPI	GCANNNNNTGC	1 cut(s)	1280
BstBAI	YACGTR	3 cut(s)	745, 810, 962
BstC8I	GCNNGC	6 cut(s)	20, 113, 609, 970, 1308, 1477
BstDEI	CTNAG	3 cut(s)	235, 324, 1055
BstEII	GGTNACC	1 cut(s)	700
BstF5I	GGATG	2 cut(s)	1276, 1428
BstFNI	CGCG	3 cut(s)	115, 480, 791
BstHHI	GCGC	1 cut(s)	1312
BstKTI	GATC	6 cut(s)	245, 475, 558, 634, 1120, 1197
BstMAI	GTCTC	3 cut(s)	127, 256, 836
BstMBI	GATC	6 cut(s)	242, 472, 555, 631, 1117, 1194
BstMWI	GCNNNNNNNGC	2 cut(s)	62, 1280
BstNSI	RCATGY	1 cut(s)	1096
BstPI	GGTNACC	1 cut(s)	700
BstSCI	CCNGG	1 cut(s)	383
BstSLI	GKGCMC	1 cut(s)	1337
BstSNI	TACGTA	1 cut(s)	810
BstUI	CGCG	3 cut(s)	115, 480, 791
BstV1I	GCAGC	2 cut(s)	1332, 1588
BstV2I	GAAGAC	1 cut(s)	427
BsuI	GTATCC	1 cut(s)	793
BsuRI	GGCC	2 cut(s)	37, 737
BtgZI	GCGATG	2 cut(s)	430, 520
BtsCI	GGATG	2 cut(s)	1276, 1428
BtsI	GCAGTG	2 cut(s)	762, 1290
BtsIMutI	CAGTG	2 cut(s)	762, 1290
Cac8I	GCNNGC	6 cut(s)	20, 113, 609, 970, 1308, 1477
CfoI	GCGC	1 cut(s)	1312
Cfr10I	RCCGGY	1 cut(s)	585
Cfr13I	GGNCC	4 cut(s)	35, 387, 583, 588
CpoI	CGGWCCG	1 cut(s)	583
CseI	GACGC	3 cut(s)	431, 469, 1499
Csp6I	GTAC	7 cut(s)	239, 626, 794, 811, 855, 1449, 1566
CspAI	ACCGGT	1 cut(s)	585
CspCI	CAANNNNNGTGG	2 cut(s)	694, 729
CspI	CGGWCCG	1 cut(s)	583
CviAII	CATG	5 cut(s)	553, 1093, 1198, 1207, 1355
CviQI	GTAC	7 cut(s)	239, 626, 794, 811, 855, 1449, 1566
DdeI	CTNAG	3 cut(s)	235, 324, 1055
DpnI	GATC	6 cut(s)	244, 474, 557, 633, 1119, 1196
DpnII	GATC	6 cut(s)	242, 472, 555, 631, 1117, 1194
DrdI	GACNNNNNNGTC	1 cut(s)	716
DseDI	GACNNNNNNGTC	1 cut(s)	716
EaeI	YGGCCR	1 cut(s)	735
Eam1104I	CTCTTC	1 cut(s)	548
EarI	CTCTTC	1 cut(s)	548
Eco105I	TACGTA	1 cut(s)	810
Eco47I	GGWCC	3 cut(s)	387, 583, 588
Eco72I	CACGTG	1 cut(s)	745
Eco91I	GGTNACC	1 cut(s)	700
EcoO65I	GGTNACC	1 cut(s)	700
EcoT22I	ATGCAT	1 cut(s)	1276
Esp3I	CGTCTC	1 cut(s)	127
FaeI	CATG	5 cut(s)	556, 1096, 1201, 1210, 1358
FatI	CATG	5 cut(s)	552, 1092, 1197, 1206, 1354
FauI	CCCGC	2 cut(s)	120, 577
FbaI	TGATCA	1 cut(s)	555
Fnu4HI	GCNGC	3 cut(s)	510, 1321, 1577
FokI	GGATG	2 cut(s)	1283, 1435
Fsp4HI	GCNGC	3 cut(s)	510, 1321, 1577
FspBI	CTAG	2 cut(s)	248, 969
GlaI	GCGC	1 cut(s)	1311
GluI	GCNGC	3 cut(s)	510, 1321, 1577
HaeIII	GGCC	2 cut(s)	37, 737
HapII	CCGG	9 cut(s)	363, 385, 581, 586, 721, 738, 797, 905, 1010
HgaI	GACGC	3 cut(s)	431, 469, 1499
HhaI	GCGC	1 cut(s)	1312
Hin1I	GRCGYC	1 cut(s)	423
Hin1II	CATG	5 cut(s)	556, 1096, 1201, 1210, 1358
Hin6I	GCGC	1 cut(s)	1310
HinP1I	GCGC	1 cut(s)	1310
HincII	GTYRAC	1 cut(s)	526
HindII	GTYRAC	1 cut(s)	526
HindIII	AAGCTT	2 cut(s)	20, 1427
HinfI	GANTC	1 cut(s)	530
HpaII	CCGG	9 cut(s)	363, 385, 581, 586, 721, 738, 797, 905, 1010
HphI	GGTGA	5 cut(s)	328, 394, 644, 694, 1240
Hpy166II	GTNNAC	9 cut(s)	484, 526, 591, 652, 748, 1024, 1204, 1335, 1451
Hpy188I	TCNGA	9 cut(s)	95, 127, 150, 269, 327, 421, 636, 1140, 1263
Hpy188III	TCNNGA	2 cut(s)	470, 843
Hpy8I	GTNNAC	9 cut(s)	484, 526, 591, 652, 748, 1024, 1204, 1335, 1451
Hpy99I	CGWCG	1 cut(s)	425
HpyAV	CCTTC	5 cut(s)	288, 976, 1081, 1258, 1365
HpyCH4III	ACNGT	4 cut(s)	523, 625, 859, 1570
HpyCH4IV	ACGT	3 cut(s)	744, 809, 961
HpyF10VI	GCNNNNNNNGC	2 cut(s)	62, 1280
HpyF3I	CTNAG	3 cut(s)	235, 324, 1055
HpySE526I	ACGT	3 cut(s)	744, 809, 961
Hsp92I	GRCGYC	1 cut(s)	423
Hsp92II	CATG	5 cut(s)	556, 1096, 1201, 1210, 1358
HspAI	GCGC	1 cut(s)	1310
KpnI	GGTACC	1 cut(s)	797
Ksp22I	TGATCA	1 cut(s)	555
Kzo9I	GATC	6 cut(s)	242, 472, 555, 631, 1117, 1194
LmnI	GCTCC	1 cut(s)	1111
Lsp1109I	GCAGC	2 cut(s)	1332, 1588
LweI	GCATC	2 cut(s)	1261, 1293
MaeI	CTAG	2 cut(s)	248, 969
MaeII	ACGT	3 cut(s)	744, 809, 961
MaeIII	GTNAC	5 cut(s)	700, 723, 913, 1123, 1228
MalI	GATC	6 cut(s)	244, 474, 557, 633, 1119, 1196
MboI	GATC	6 cut(s)	242, 472, 555, 631, 1117, 1194
MboII	GAAGA	4 cut(s)	427, 467, 535, 1192
MhlI	GDGCHC	1 cut(s)	1337
MluCI	AATT	6 cut(s)	138, 358, 814, 955, 1183, 1394
MlyI	GAGTC	1 cut(s)	524
MmeI	TCCRAC	3 cut(s)	444, 1241, 1275
Mph1103I	ATGCAT	1 cut(s)	1276
MseI	TTAA	5 cut(s)	861, 1005, 1532, 1572, 1581
MspCI	CTTAAG	1 cut(s)	1580
MspI	CCGG	9 cut(s)	363, 385, 581, 586, 721, 738, 797, 905, 1010
MspR9I	CCNGG	1 cut(s)	385
Mva1269I	GAATGC	1 cut(s)	572
MvnI	CGCG	3 cut(s)	115, 480, 791
MwoI	GCNNNNNNNGC	2 cut(s)	62, 1280
NciI	CCSGG	1 cut(s)	385
NdeII	GATC	6 cut(s)	242, 472, 555, 631, 1117, 1194
NheI	GCTAGC	1 cut(s)	968
NlaIII	CATG	5 cut(s)	556, 1096, 1201, 1210, 1358
NlaIV	GGNNCC	2 cut(s)	795, 1113
NmuCI	GTSAC	3 cut(s)	700, 723, 1228
NsiI	ATGCAT	1 cut(s)	1276
NspI	RCATGY	1 cut(s)	1096
PcsI	WCGNNNNNNNCGW	1 cut(s)	477
PctI	GAATGC	1 cut(s)	572
PinAI	ACCGGT	1 cut(s)	585
PkrI	GCNGC	3 cut(s)	511, 1322, 1578
PleI	GAGTC	1 cut(s)	524
PmaCI	CACGTG	1 cut(s)	745
PmlI	CACGTG	1 cut(s)	745
PpsI	GAGTC	1 cut(s)	524
Ppu21I	YACGTR	3 cut(s)	745, 810, 962
PspCI	CACGTG	1 cut(s)	745
PspEI	GGTNACC	1 cut(s)	700
PspN4I	GGNNCC	2 cut(s)	795, 1113
PspPI	GGNCC	4 cut(s)	35, 387, 583, 588
RsaI	GTAC	7 cut(s)	240, 627, 795, 812, 856, 1450, 1567
RsaNI	GTAC	7 cut(s)	239, 626, 794, 811, 855, 1449, 1566
Rsr2I	CGGWCCG	1 cut(s)	583
RsrII	CGGWCCG	1 cut(s)	583
SaqAI	TTAA	5 cut(s)	861, 1005, 1532, 1572, 1581
SatI	GCNGC	3 cut(s)	510, 1321, 1577
Sau3AI	GATC	6 cut(s)	242, 472, 555, 631, 1117, 1194
Sau96I	GGNCC	4 cut(s)	35, 387, 583, 588
ScaI	AGTACT	1 cut(s)	856
SchI	GAGTC	1 cut(s)	524
ScrFI	CCNGG	1 cut(s)	385
SduI	GDGCHC	1 cut(s)	1337
SfaNI	GCATC	2 cut(s)	1261, 1293
SinI	GGWCC	3 cut(s)	387, 583, 588
SmlI	CTYRAG	1 cut(s)	1580
SmoI	CTYRAG	1 cut(s)	1580
SnaBI	TACGTA	1 cut(s)	810
SpeI	ACTAGT	1 cut(s)	247
Sse9I	AATT	6 cut(s)	138, 358, 814, 955, 1183, 1394
SsiI	CCGC	7 cut(s)	16, 113, 453, 510, 570, 791, 1192
SspMI	CTAG	2 cut(s)	248, 969
StyD4I	CCNGG	1 cut(s)	383
TaaI	ACNGT	4 cut(s)	523, 625, 859, 1570
TaiI	ACGT	3 cut(s)	747, 812, 964
TaqI	TCGA	4 cut(s)	471, 842, 894, 1154
TasI	AATT	6 cut(s)	138, 358, 814, 955, 1183, 1394
TatI	WGTACW	3 cut(s)	854, 1448, 1565
TauI	GCSGC	1 cut(s)	512
Tru1I	TTAA	5 cut(s)	861, 1005, 1532, 1572, 1581
Tru9I	TTAA	5 cut(s)	861, 1005, 1532, 1572, 1581
TscAI	CASTG	2 cut(s)	762, 1290
TseFI	GTSAC	3 cut(s)	700, 723, 1228
TseI	GCWGC	2 cut(s)	1320, 1576
Tsp45I	GTSAC	3 cut(s)	700, 723, 1228
TspDTI	ATGAA	9 cut(s)	17, 21, 782, 1052, 1230, 1262, 1343, 1424, 1439
TspRI	CASTG	2 cut(s)	762, 1290
Vha464I	CTTAAG	1 cut(s)	1580
VneI	GTGCAC	1 cut(s)	1333
VpaK11BI	GGWCC	3 cut(s)	387, 583, 588
XapI	RAATTY	3 cut(s)	138, 358, 955
XceI	RCATGY	1 cut(s)	1096
XspI	CTAG	2 cut(s)	248, 969
ZrmI	AGTACT	1 cut(s)	856
Zsp2I	ATGCAT	1 cut(s)	1276

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.