Methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51070 AT3G51070 |
| fragaria_vesca | FvH4_1g12411 |
| malus_domestica | MD02G1136800.v1.1 MD15G1250600.v1.1 |
| prunus_persica | Prupe.7G163700_v2.0.a1 |
| pyrus_communis | pycom15g22090 |
| rosa_chinensis | RchiOBHm_Chr2g0100281 |
| rosa_laevigata | RLG00000016952 |
| rosa_multiflora | Rmu_sc0002547.1_g000021 Rmu_sc0002547.1_g000022 |
| rosa_roxburghii | Rroxscaffold_2G00142420 |
| rosa_rugosa | Rorug02G0087100 Rorug02G0087200 |
| rosa_samantha | Rh2AG136100 Rh2BG139700 Rh2CG141400 Rh2DG141600 |
| rosa_wichuraiana | Rw2G010650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 356, 1430 |
| Acc36I | ACCTGC | 1 cut(s) | 619 |
| AccB1I | GGYRCC | 2 cut(s) | 1091, 1869 |
| AccBSI | CCGCTC | 3 cut(s) | 564, 2426, 2450 |
| AccII | CGCG | 1 cut(s) | 22 |
| AccIII | TCCGGA | 3 cut(s) | 283, 1411, 2396 |
| AclWI | GGATC | 4 cut(s) | 408, 1200, 2144, 2466 |
| AcoI | YGGCCR | 3 cut(s) | 556, 1439, 2231 |
| AcsI | RAATTY | 5 cut(s) | 622, 799, 2053, 2541, 2645 |
| AcuI | CTGAAG | 1 cut(s) | 405 |
| AcvI | CACGTG | 1 cut(s) | 1263 |
| AcyI | GRCGYC | 2 cut(s) | 353, 1427 |
| AdeI | CACNNNGTG | 1 cut(s) | 101 |
| AfaI | GTAC | 5 cut(s) | 1259, 1476, 1614, 1801, 2172 |
| AfeI | AGCGCT | 1 cut(s) | 136 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 1385, 1516, 1556, 1767, 1768, 1825, 1879, 1955 |
| AflII | CTTAAG | 1 cut(s) | 2462 |
| AflIII | ACRYGT | 2 cut(s) | 1260, 2350 |
| AgsI | TTSAA | 7 cut(s) | 54, 147, 263, 788, 827, 1604, 1903 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1287 |
| AjnI | CCWGG | 5 cut(s) | 1398, 1549, 1761, 1918, 2162 |
| Alw21I | GWGCWC | 1 cut(s) | 1852 |
| Alw26I | GTCTC | 2 cut(s) | 932, 1446 |
| Alw44I | GTGCAC | 1 cut(s) | 1848 |
| AlwI | GGATC | 4 cut(s) | 408, 1200, 2144, 2466 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1073, 1292, 1810 |
| Ama87I | CYCGRG | 3 cut(s) | 1105, 1138, 1641 |
| Aor13HI | TCCGGA | 3 cut(s) | 283, 1411, 2396 |
| Aor51HI | AGCGCT | 1 cut(s) | 136 |
| AoxI | GGCC | 6 cut(s) | 311, 556, 1439, 1916, 2231, 2243 |
| ApaLI | GTGCAC | 1 cut(s) | 1848 |
| ApoI | RAATTY | 5 cut(s) | 622, 799, 2053, 2541, 2645 |
| AspLEI | GCGC | 4 cut(s) | 24, 137, 1221, 1580 |
| AspS9I | GGNCC | 6 cut(s) | 311, 1289, 1388, 1560, 2023, 2394 |
| AsuC2I | CCSGG | 3 cut(s) | 273, 678, 2287 |
| AsuHPI | GGTGA | 5 cut(s) | 287, 1510, 1544, 2485, 2497 |
| AvaI | CYCGRG | 3 cut(s) | 1105, 1138, 1641 |
| AvaII | GGWCC | 5 cut(s) | 1289, 1388, 1560, 2023, 2394 |
| BaeGI | GKGCMC | 2 cut(s) | 1094, 1852 |
| BalI | TGGCCA | 1 cut(s) | 2233 |
| BanI | GGYRCC | 2 cut(s) | 1091, 1869 |
| BbrPI | CACGTG | 1 cut(s) | 1263 |
| BbsI | GAAGAC | 2 cut(s) | 39, 270 |
| Bbv12I | GWGCWC | 1 cut(s) | 1852 |
| BbvCI | CCTCAGC | 1 cut(s) | 1047 |
| BccI | CCATC | 5 cut(s) | 70, 302, 2078, 2284, 2522 |
| BceAI | ACGGC | 4 cut(s) | 177, 568, 1141, 1823 |
| BciT130I | CCWGG | 5 cut(s) | 1400, 1551, 1763, 1920, 2164 |
| BclI | TGATCA | 4 cut(s) | 511, 574, 1075, 2355 |
| BcnI | CCSGG | 3 cut(s) | 273, 678, 2287 |
| BcoDI | GTCTC | 2 cut(s) | 932, 1446 |
| BfaI | CTAG | 1 cut(s) | 779 |
| BfmI | CTRYAG | 4 cut(s) | 612, 1284, 2177, 2499 |
| BfoI | RGCGCY | 2 cut(s) | 138, 1581 |
| BfrI | CTTAAG | 1 cut(s) | 2462 |
| BfuAI | ACCTGC | 1 cut(s) | 619 |
| Bme1390I | CCNGG | 8 cut(s) | 273, 678, 1400, 1551, 1763, 1920, 2164, 2287 |
| Bme18I | GGWCC | 5 cut(s) | 1289, 1388, 1560, 2023, 2394 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1287 |
| BmeT110I | CYCGRG | 3 cut(s) | 1105, 1138, 1641 |
| BmgT120I | GGNCC | 6 cut(s) | 311, 1289, 1388, 1560, 2023, 2394 |
| BmiI | GGNNCC | 9 cut(s) | 1093, 1389, 1390, 1404, 1561, 1562, 1871, 2024, 2199 |
| BmrFI | CCNGG | 8 cut(s) | 273, 678, 1400, 1551, 1763, 1920, 2164, 2287 |
| BmrI | ACTGGG | 1 cut(s) | 1525 |
| BmsI | GCATC | 9 cut(s) | 280, 316, 367, 690, 883, 910, 1257, 1369, 1825 |
| BmuI | ACTGGG | 1 cut(s) | 1525 |
| BpiI | GAAGAC | 2 cut(s) | 39, 270 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1088, 1120, 2209, 2241 |
| BpmI | CTGGAG | 2 cut(s) | 115, 159 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1047 |
| BpuEI | CTTGAG | 5 cut(s) | 585, 639, 1170, 1731, 2438 |
| BpuMI | CCSGG | 3 cut(s) | 273, 678, 2287 |
| BsaAI | YACGTR | 1 cut(s) | 1263 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2148 |
| BsaHI | GRCGYC | 2 cut(s) | 353, 1427 |
| BsaJI | CCNNGG | 8 cut(s) | 159, 195, 252, 677, 997, 1761, 1865, 1919 |
| BsaWI | WCCGGW | 5 cut(s) | 283, 1411, 1529, 2396, 2669 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 1385, 1516, 1556, 1767, 1768, 1825, 1879, 1955 |
| Bse1I | ACTGG | 7 cut(s) | 1435, 1520, 1656, 2246, 2259, 2276, 2348 |
| Bse3DI | GCAATG | 2 cut(s) | 1282, 1484 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2148 |
| BseAI | TCCGGA | 3 cut(s) | 283, 1411, 2396 |
| BseBI | CCWGG | 5 cut(s) | 1400, 1551, 1763, 1920, 2164 |
| BseDI | CCNNGG | 8 cut(s) | 159, 195, 252, 677, 997, 1761, 1865, 1919 |
| BseGI | GGATG | 5 cut(s) | 123, 205, 331, 1408, 2295 |
| BseJI | GATNNNNATC | 1 cut(s) | 2148 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 1385, 1516, 1556, 1767, 1768, 1825, 1879, 1955 |
| BseMI | GCAATG | 2 cut(s) | 1282, 1484 |
| BseMII | CTCAG | 6 cut(s) | 213, 429, 710, 1061, 1817, 2205 |
| BseNI | ACTGG | 7 cut(s) | 1435, 1520, 1656, 2246, 2259, 2276, 2348 |
| BseRI | GAGGAG | 4 cut(s) | 184, 1574, 2253, 2585 |
| BseSI | GKGCMC | 2 cut(s) | 1094, 1852 |
| BseYI | CCCAGC | 1 cut(s) | 1820 |
| BsgI | GTGCAG | 1 cut(s) | 2678 |
| Bsh1236I | CGCG | 1 cut(s) | 22 |
| Bsh1285I | CGRYCG | 1 cut(s) | 44 |
| BshFI | GGCC | 6 cut(s) | 313, 558, 1441, 1918, 2233, 2245 |
| BshNI | GGYRCC | 2 cut(s) | 1091, 1869 |
| BsiEI | CGRYCG | 1 cut(s) | 44 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1852 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1105, 1138, 1641 |
| BsiSI | CCGG | 8 cut(s) | 273, 284, 677, 1412, 1530, 2287, 2397, 2670 |
| BslFI | GGGAC | 7 cut(s) | 796, 1145, 1374, 1518, 1573, 2036, 2236 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 1385, 1516, 1556, 1767, 1768, 1825, 1879, 1955 |
| BsmAI | GTCTC | 2 cut(s) | 932, 1446 |
| BsmFI | GGGAC | 7 cut(s) | 796, 1145, 1374, 1518, 1573, 2036, 2236 |
| BsmI | GAATGC | 3 cut(s) | 688, 1143, 1890 |
| BsnI | GGCC | 6 cut(s) | 313, 558, 1441, 1918, 2233, 2245 |
| BsoBI | CYCGRG | 3 cut(s) | 1105, 1138, 1641 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1094, 1852 |
| Bsp13I | TCCGGA | 3 cut(s) | 283, 1411, 2396 |
| BspANI | GGCC | 6 cut(s) | 313, 558, 1441, 1918, 2233, 2245 |
| BspCNI | CTCAG | 6 cut(s) | 214, 430, 709, 1060, 1816, 2206 |
| BspEI | TCCGGA | 3 cut(s) | 283, 1411, 2396 |
| BspFNI | CGCG | 1 cut(s) | 22 |
| BspHI | TCATGA | 2 cut(s) | 904, 2548 |
| BspLI | GGNNCC | 9 cut(s) | 1093, 1389, 1390, 1404, 1561, 1562, 1871, 2024, 2199 |
| BspMAI | CTGCAG | 3 cut(s) | 616, 2181, 2503 |
| BspMI | ACCTGC | 1 cut(s) | 619 |
| BspPI | GGATC | 4 cut(s) | 408, 1200, 2144, 2466 |
| BspQI | GCTCTTC | 1 cut(s) | 762 |
| BspT107I | GGYRCC | 2 cut(s) | 1091, 1869 |
| BspTI | CTTAAG | 1 cut(s) | 2462 |
| BsrBI | CCGCTC | 3 cut(s) | 564, 2426, 2450 |
| BsrDI | GCAATG | 2 cut(s) | 1282, 1484 |
| BsrI | ACTGG | 7 cut(s) | 1435, 1520, 1656, 2246, 2259, 2276, 2348 |
| BssECI | CCNNGG | 8 cut(s) | 159, 195, 252, 677, 997, 1761, 1865, 1919 |
| BssNI | GRCGYC | 2 cut(s) | 353, 1427 |
| BssT1I | CCWWGG | 3 cut(s) | 252, 997, 1865 |
| Bst2UI | CCWGG | 5 cut(s) | 1400, 1551, 1763, 1920, 2164 |
| Bst4CI | ACNGT | 6 cut(s) | 73, 99, 178, 432, 1847, 2366 |
| Bst6I | CTCTTC | 1 cut(s) | 762 |
| BstACI | GRCGYC | 2 cut(s) | 353, 1427 |
| BstAFI | CTTAAG | 1 cut(s) | 2462 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1486 |
| BstBAI | YACGTR | 1 cut(s) | 1263 |
| BstC8I | GCNNGC | 5 cut(s) | 638, 1491, 1675, 2081, 2181 |
| BstDEI | CTNAG | 6 cut(s) | 222, 438, 696, 1047, 1803, 2214 |
| BstDSI | CCRYGG | 1 cut(s) | 159 |
| BstF5I | GGATG | 5 cut(s) | 123, 205, 331, 1408, 2295 |
| BstFNI | CGCG | 1 cut(s) | 22 |
| BstH2I | RGCGCY | 2 cut(s) | 138, 1581 |
| BstHHI | GCGC | 4 cut(s) | 24, 137, 1221, 1580 |
| BstMAI | GTCTC | 2 cut(s) | 932, 1446 |
| BstMCI | CGRYCG | 1 cut(s) | 44 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 415, 561, 727, 859, 1134, 1378, 1486, 1787 |
| BstNI | CCWGG | 5 cut(s) | 1400, 1551, 1763, 1920, 2164 |
| BstNSI | RCATGY | 1 cut(s) | 2187 |
| BstSCI | CCNGG | 8 cut(s) | 271, 676, 1398, 1549, 1761, 1918, 2162, 2285 |
| BstSFI | CTRYAG | 4 cut(s) | 612, 1284, 2177, 2499 |
| BstSLI | GKGCMC | 2 cut(s) | 1094, 1852 |
| BstUI | CGCG | 1 cut(s) | 22 |
| BstV2I | GAAGAC | 2 cut(s) | 39, 270 |
| BstX2I | RGATCY | 1 cut(s) | 2458 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 566, 1399, 2241 |
| BstYI | RGATCY | 1 cut(s) | 2458 |
| BsuRI | GGCC | 6 cut(s) | 313, 558, 1441, 1918, 2233, 2245 |
| BtgI | CCRYGG | 1 cut(s) | 159 |
| BtsCI | GGATG | 5 cut(s) | 123, 205, 331, 1408, 2295 |
| BtsI | GCAGTG | 2 cut(s) | 186, 501 |
| BtsIMutI | CAGTG | 6 cut(s) | 95, 186, 501, 1442, 1843, 2341 |
| BveI | ACCTGC | 1 cut(s) | 619 |
| Cac8I | GCNNGC | 5 cut(s) | 638, 1491, 1675, 2081, 2181 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1073, 1292, 1810 |
| CciI | TCATGA | 2 cut(s) | 904, 2548 |
| CfoI | GCGC | 4 cut(s) | 24, 137, 1221, 1580 |
| Cfr13I | GGNCC | 6 cut(s) | 311, 1289, 1388, 1560, 2023, 2394 |
| Csp6I | GTAC | 5 cut(s) | 1258, 1475, 1613, 1800, 2171 |
| CviQI | GTAC | 5 cut(s) | 1258, 1475, 1613, 1800, 2171 |
| DdeI | CTNAG | 6 cut(s) | 222, 438, 696, 1047, 1803, 2214 |
| DraIII | CACNNNGTG | 1 cut(s) | 101 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1287 |
| EaeI | YGGCCR | 3 cut(s) | 556, 1439, 2231 |
| Eam1104I | CTCTTC | 1 cut(s) | 762 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1287 |
| EarI | CTCTTC | 1 cut(s) | 762 |
| EciI | GGCGGA | 1 cut(s) | 1508 |
| Eco130I | CCWWGG | 3 cut(s) | 252, 997, 1865 |
| Eco147I | AGGCCT | 1 cut(s) | 1918 |
| Eco47I | GGWCC | 5 cut(s) | 1289, 1388, 1560, 2023, 2394 |
| Eco47III | AGCGCT | 1 cut(s) | 136 |
| Eco57I | CTGAAG | 1 cut(s) | 405 |
| Eco72I | CACGTG | 1 cut(s) | 1263 |
| Eco88I | CYCGRG | 3 cut(s) | 1105, 1138, 1641 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1289, 1388, 1560, 2023 |
| EcoRII | CCWGG | 5 cut(s) | 1398, 1549, 1761, 1918, 2162 |
| EcoT14I | CCWWGG | 3 cut(s) | 252, 997, 1865 |
| ErhI | CCWWGG | 3 cut(s) | 252, 997, 1865 |
| FaqI | GGGAC | 7 cut(s) | 796, 1145, 1374, 1518, 1573, 2036, 2236 |
| FauI | CCCGC | 1 cut(s) | 1121 |
| FbaI | TGATCA | 4 cut(s) | 511, 574, 1075, 2355 |
| FokI | GGATG | 5 cut(s) | 130, 212, 338, 1395, 2302 |
| FspBI | CTAG | 1 cut(s) | 779 |
| GlaI | GCGC | 4 cut(s) | 23, 136, 1220, 1579 |
| GsaI | CCCAGC | 1 cut(s) | 1824 |
| GsuI | CTGGAG | 2 cut(s) | 115, 159 |
| HaeII | RGCGCY | 2 cut(s) | 138, 1581 |
| HaeIII | GGCC | 6 cut(s) | 313, 558, 1441, 1918, 2233, 2245 |
| HapII | CCGG | 8 cut(s) | 273, 284, 677, 1412, 1530, 2287, 2397, 2670 |
| HhaI | GCGC | 4 cut(s) | 24, 137, 1221, 1580 |
| Hin1I | GRCGYC | 2 cut(s) | 353, 1427 |
| Hin6I | GCGC | 4 cut(s) | 22, 135, 1219, 1578 |
| HinP1I | GCGC | 4 cut(s) | 22, 135, 1219, 1578 |
| HincII | GTYRAC | 1 cut(s) | 2206 |
| HindII | GTYRAC | 1 cut(s) | 2206 |
| HindIII | AAGCTT | 2 cut(s) | 657, 1961 |
| HpaII | CCGG | 8 cut(s) | 273, 284, 677, 1412, 1530, 2287, 2397, 2670 |
| HphI | GGTGA | 5 cut(s) | 287, 1510, 1544, 2485, 2497 |
| Hpy166II | GTNNAC | 4 cut(s) | 1260, 1843, 1850, 2206 |
| Hpy8I | GTNNAC | 4 cut(s) | 1260, 1843, 1850, 2206 |
| Hpy99I | CGWCG | 1 cut(s) | 938 |
| HpyAV | CCTTC | 6 cut(s) | 1204, 1315, 1495, 1610, 1825, 1871 |
| HpyCH4III | ACNGT | 6 cut(s) | 73, 99, 178, 432, 1847, 2366 |
| HpyCH4IV | ACGT | 8 cut(s) | 353, 585, 1262, 1427, 1656, 1852, 2350, 2527 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 415, 561, 727, 859, 1134, 1378, 1486, 1787 |
| HpyF3I | CTNAG | 6 cut(s) | 222, 438, 696, 1047, 1803, 2214 |
| HpySE526I | ACGT | 8 cut(s) | 353, 585, 1262, 1427, 1656, 1852, 2350, 2527 |
| Hsp92I | GRCGYC | 2 cut(s) | 353, 1427 |
| HspAI | GCGC | 4 cut(s) | 22, 135, 1219, 1578 |
| KflI | GGGWCCC | 2 cut(s) | 1388, 1560 |
| Kpn2I | TCCGGA | 3 cut(s) | 283, 1411, 2396 |
| Ksp22I | TGATCA | 4 cut(s) | 511, 574, 1075, 2355 |
| LguI | GCTCTTC | 1 cut(s) | 762 |
| LmnI | GCTCC | 1 cut(s) | 2288 |
| LweI | GCATC | 9 cut(s) | 280, 316, 367, 690, 883, 910, 1257, 1369, 1825 |
| MaeI | CTAG | 1 cut(s) | 779 |
| MaeII | ACGT | 8 cut(s) | 353, 585, 1262, 1427, 1656, 1852, 2350, 2527 |
| MaeIII | GTNAC | 7 cut(s) | 32, 178, 949, 1279, 1418, 1925, 2366 |
| MbiI | CCGCTC | 3 cut(s) | 564, 2426, 2450 |
| MfeI | CAATTG | 1 cut(s) | 2389 |
| MflI | RGATCY | 1 cut(s) | 2458 |
| MhlI | GDGCHC | 2 cut(s) | 1094, 1852 |
| MlsI | TGGCCA | 1 cut(s) | 2233 |
| MluCI | AATT | 9 cut(s) | 124, 622, 799, 1565, 2053, 2389, 2541, 2645, 2683 |
| MluNI | TGGCCA | 1 cut(s) | 2233 |
| MlyI | GAGTC | 7 cut(s) | 818, 1106, 1163, 1172, 1177, 2218, 2409 |
| MmeI | TCCRAC | 2 cut(s) | 1125, 1179 |
| Mox20I | TGGCCA | 1 cut(s) | 2233 |
| MroI | TCCGGA | 3 cut(s) | 283, 1411, 2396 |
| MscI | TGGCCA | 1 cut(s) | 2233 |
| MseI | TTAA | 6 cut(s) | 420, 1521, 1913, 2003, 2276, 2463 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2417 |
| Msp20I | TGGCCA | 1 cut(s) | 2233 |
| MspA1I | CMGCKG | 3 cut(s) | 221, 383, 1073 |
| MspCI | CTTAAG | 1 cut(s) | 2462 |
| MspI | CCGG | 8 cut(s) | 273, 284, 677, 1412, 1530, 2287, 2397, 2670 |
| MspR9I | CCNGG | 8 cut(s) | 273, 678, 1400, 1551, 1763, 1920, 2164, 2287 |
| MunI | CAATTG | 1 cut(s) | 2389 |
| Mva1269I | GAATGC | 3 cut(s) | 688, 1143, 1890 |
| MvaI | CCWGG | 5 cut(s) | 1400, 1551, 1763, 1920, 2164 |
| MvnI | CGCG | 1 cut(s) | 22 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 415, 561, 727, 859, 1134, 1378, 1486, 1787 |
| NciI | CCSGG | 3 cut(s) | 273, 678, 2287 |
| NlaIV | GGNNCC | 9 cut(s) | 1093, 1389, 1390, 1404, 1561, 1562, 1871, 2024, 2199 |
| NmuCI | GTSAC | 3 cut(s) | 178, 949, 1279 |
| NspI | RCATGY | 1 cut(s) | 2187 |
| PaeR7I | CTCGAG | 1 cut(s) | 1641 |
| PagI | TCATGA | 2 cut(s) | 904, 2548 |
| PceI | AGGCCT | 1 cut(s) | 1918 |
| PciSI | GCTCTTC | 1 cut(s) | 762 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1145, 1172 |
| PctI | GAATGC | 3 cut(s) | 688, 1143, 1890 |
| PfeI | GAWTC | 8 cut(s) | 87, 868, 979, 1037, 1618, 1903, 2495, 2561 |
| PfoI | TCCNGGA | 1 cut(s) | 2285 |
| PleI | GAGTC | 7 cut(s) | 817, 1105, 1162, 1171, 1177, 2218, 2408 |
| PmaCI | CACGTG | 1 cut(s) | 1263 |
| PmlI | CACGTG | 1 cut(s) | 1263 |
| PpsI | GAGTC | 7 cut(s) | 817, 1105, 1162, 1171, 1177, 2218, 2408 |
| Ppu21I | YACGTR | 1 cut(s) | 1263 |
| PpuMI | RGGWCCY | 4 cut(s) | 1289, 1388, 1560, 2023 |
| Psp5II | RGGWCCY | 4 cut(s) | 1289, 1388, 1560, 2023 |
| Psp6I | CCWGG | 5 cut(s) | 1398, 1549, 1761, 1918, 2162 |
| PspCI | CACGTG | 1 cut(s) | 1263 |
| PspFI | CCCAGC | 1 cut(s) | 1820 |
| PspGI | CCWGG | 5 cut(s) | 1398, 1549, 1761, 1918, 2162 |
| PspN4I | GGNNCC | 9 cut(s) | 1093, 1389, 1390, 1404, 1561, 1562, 1871, 2024, 2199 |
| PspPI | GGNCC | 6 cut(s) | 311, 1289, 1388, 1560, 2023, 2394 |
| PspPPI | RGGWCCY | 4 cut(s) | 1289, 1388, 1560, 2023 |
| PspXI | VCTCGAGB | 1 cut(s) | 1641 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2084, 2116 |
| PstI | CTGCAG | 3 cut(s) | 616, 2181, 2503 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1073, 1292, 1810 |
| PsuI | RGATCY | 1 cut(s) | 2458 |
| PvuII | CAGCTG | 2 cut(s) | 383, 1073 |
| RsaI | GTAC | 5 cut(s) | 1259, 1476, 1614, 1801, 2172 |
| RsaNI | GTAC | 5 cut(s) | 1258, 1475, 1613, 1800, 2171 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2417 |
| SapI | GCTCTTC | 1 cut(s) | 762 |
| SaqAI | TTAA | 6 cut(s) | 420, 1521, 1913, 2003, 2276, 2463 |
| Sau96I | GGNCC | 6 cut(s) | 311, 1289, 1388, 1560, 2023, 2394 |
| SchI | GAGTC | 7 cut(s) | 818, 1106, 1163, 1172, 1177, 2218, 2409 |
| ScrFI | CCNGG | 8 cut(s) | 273, 678, 1400, 1551, 1763, 1920, 2164, 2287 |
| SduI | GDGCHC | 2 cut(s) | 1094, 1852 |
| SfaNI | GCATC | 9 cut(s) | 280, 316, 367, 690, 883, 910, 1257, 1369, 1825 |
| SfcI | CTRYAG | 4 cut(s) | 612, 1284, 2177, 2499 |
| Sfr274I | CTCGAG | 1 cut(s) | 1641 |
| SinI | GGWCC | 5 cut(s) | 1289, 1388, 1560, 2023, 2394 |
| SlaI | CTCGAG | 1 cut(s) | 1641 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2417 |
| SmlI | CTYRAG | 7 cut(s) | 600, 654, 1185, 1641, 1746, 2453, 2462 |
| SmoI | CTYRAG | 7 cut(s) | 600, 654, 1185, 1641, 1746, 2453, 2462 |
| Sse9I | AATT | 9 cut(s) | 124, 622, 799, 1565, 2053, 2389, 2541, 2645, 2683 |
| SseBI | AGGCCT | 1 cut(s) | 1918 |
| SspI | AATATT | 1 cut(s) | 823 |
| SspMI | CTAG | 1 cut(s) | 779 |
| StuI | AGGCCT | 1 cut(s) | 1918 |
| StyD4I | CCNGG | 8 cut(s) | 271, 676, 1398, 1549, 1761, 1918, 2162, 2285 |
| StyI | CCWWGG | 3 cut(s) | 252, 997, 1865 |
| TaaI | ACNGT | 6 cut(s) | 73, 99, 178, 432, 1847, 2366 |
| TaiI | ACGT | 8 cut(s) | 356, 588, 1265, 1430, 1659, 1855, 2353, 2530 |
| TaqI | TCGA | 8 cut(s) | 166, 1166, 1363, 1642, 1875, 2090, 2251, 2643 |
| TasI | AATT | 9 cut(s) | 124, 622, 799, 1565, 2053, 2389, 2541, 2645, 2683 |
| TauI | GCSGC | 5 cut(s) | 221, 558, 2066, 2447, 2450 |
| TfiI | GAWTC | 8 cut(s) | 87, 868, 979, 1037, 1618, 1903, 2495, 2561 |
| Tru1I | TTAA | 6 cut(s) | 420, 1521, 1913, 2003, 2276, 2463 |
| Tru9I | TTAA | 6 cut(s) | 420, 1521, 1913, 2003, 2276, 2463 |
| TscAI | CASTG | 6 cut(s) | 102, 193, 508, 1442, 1850, 2348 |
| TseFI | GTSAC | 3 cut(s) | 178, 949, 1279 |
| Tsp45I | GTSAC | 3 cut(s) | 178, 949, 1279 |
| TspRI | CASTG | 6 cut(s) | 102, 193, 508, 1442, 1850, 2348 |
| Vha464I | CTTAAG | 1 cut(s) | 2462 |
| VneI | GTGCAC | 1 cut(s) | 1848 |
| VpaK11BI | GGWCC | 5 cut(s) | 1289, 1388, 1560, 2023, 2394 |
| XapI | RAATTY | 5 cut(s) | 622, 799, 2053, 2541, 2645 |
| XceI | RCATGY | 1 cut(s) | 2187 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1571 |
| XhoI | CTCGAG | 1 cut(s) | 1641 |
| XspI | CTAG | 1 cut(s) | 779 |
| ZraI | GACGTC | 2 cut(s) | 354, 1428 |