asparagine--tRNA ligase, chloroplastic
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17300 AT4G17300 |
| fragaria_vesca | FvH4_1g25310 |
| malus_domestica | MD06G1059300.v1.1 |
| prunus_persica | Prupe.5G070100_v2.0.a1 Prupe.5G070100_v2.0.a1 |
| pyrus_communis | pycom06g04930 |
| rosa_chinensis | RchiOBHm_Chr2g0123321 |
| rosa_multiflora | Rmu_sc0001917.1_g000001 Rmu_sc0021262.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00120780 |
| rosa_rugosa | Rorug02G0244500 |
| rosa_samantha | Rh2AG303600 Rh2BG311700 Rh2CG290200 Rh2DG327600 |
| rosa_wichuraiana | Rw2G024300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 773 |
| Acc36I | ACCTGC | 1 cut(s) | 773 |
| AccB1I | GGYRCC | 2 cut(s) | 197, 1020 |
| AccBSI | CCGCTC | 1 cut(s) | 156 |
| AccI | GTMKAC | 2 cut(s) | 853, 1232 |
| AccII | CGCG | 2 cut(s) | 151, 360 |
| AclWI | GGATC | 2 cut(s) | 532, 575 |
| AcoI | YGGCCR | 4 cut(s) | 3, 647, 871, 928 |
| AcsI | RAATTY | 5 cut(s) | 620, 1003, 1031, 1271, 1277 |
| AcuI | CTGAAG | 2 cut(s) | 462, 1353 |
| AcyI | GRCGYC | 1 cut(s) | 198 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 207, 302, 848, 993 |
| AflIII | ACRYGT | 1 cut(s) | 1120 |
| AgsI | TTSAA | 4 cut(s) | 547, 1008, 1247, 1277 |
| AluBI | AGCT | 7 cut(s) | 182, 268, 512, 638, 819, 1054, 1205 |
| AluI | AGCT | 7 cut(s) | 182, 268, 512, 638, 819, 1054, 1205 |
| Alw26I | GTCTC | 4 cut(s) | 748, 835, 928, 1111 |
| AlwI | GGATC | 2 cut(s) | 532, 575 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 328, 440 |
| AoxI | GGCC | 8 cut(s) | 3, 125, 292, 647, 871, 928, 996, 1083 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| ApoI | RAATTY | 5 cut(s) | 620, 1003, 1031, 1271, 1277 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1251 |
| AspLEI | GCGC | 3 cut(s) | 25, 153, 200 |
| AspS9I | GGNCC | 5 cut(s) | 126, 210, 293, 983, 996 |
| AsuHPI | GGTGA | 3 cut(s) | 328, 367, 797 |
| AvaII | GGWCC | 2 cut(s) | 210, 983 |
| BalI | TGGCCA | 1 cut(s) | 930 |
| BanI | GGYRCC | 2 cut(s) | 197, 1020 |
| BanII | GRGCYC | 1 cut(s) | 309 |
| BbsI | GAAGAC | 1 cut(s) | 1149 |
| BbvI | GCAGC | 1 cut(s) | 191 |
| BccI | CCATC | 4 cut(s) | 77, 389, 842, 863 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 154, 188 |
| BclI | TGATCA | 1 cut(s) | 451 |
| BcoDI | GTCTC | 4 cut(s) | 748, 835, 928, 1111 |
| BfaI | CTAG | 1 cut(s) | 516 |
| BfoI | RGCGCY | 1 cut(s) | 201 |
| BfuAI | ACCTGC | 1 cut(s) | 773 |
| Bme18I | GGWCC | 2 cut(s) | 210, 983 |
| BmgT120I | GGNCC | 5 cut(s) | 126, 210, 293, 983, 996 |
| BmiI | GGNNCC | 3 cut(s) | 199, 985, 1022 |
| BmrI | ACTGGG | 2 cut(s) | 1277, 1349 |
| BmsI | GCATC | 3 cut(s) | 427, 1228, 1340 |
| BmuI | ACTGGG | 2 cut(s) | 1277, 1349 |
| BpiI | GAAGAC | 1 cut(s) | 1149 |
| BpmI | CTGGAG | 1 cut(s) | 1088 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1050 |
| BpuEI | CTTGAG | 2 cut(s) | 254, 730 |
| Bsa29I | ATCGAT | 2 cut(s) | 1185, 1189 |
| BsaHI | GRCGYC | 1 cut(s) | 198 |
| BsaI | GGTCTC | 1 cut(s) | 748 |
| BsaJI | CCNNGG | 1 cut(s) | 520 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 66, 96 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 207, 302, 848, 993 |
| Bse118I | RCCGGY | 2 cut(s) | 312, 338 |
| Bse1I | ACTGG | 5 cut(s) | 484, 766, 1105, 1283, 1355 |
| Bse3DI | GCAATG | 1 cut(s) | 425 |
| BseCI | ATCGAT | 2 cut(s) | 1185, 1189 |
| BseDI | CCNNGG | 1 cut(s) | 520 |
| BseGI | GGATG | 4 cut(s) | 874, 1044, 1301, 1355 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 207, 302, 848, 993 |
| BseMI | GCAATG | 1 cut(s) | 425 |
| BseMII | CTCAG | 3 cut(s) | 617, 1041, 1197 |
| BseNI | ACTGG | 5 cut(s) | 484, 766, 1105, 1283, 1355 |
| BseXI | GCAGC | 1 cut(s) | 191 |
| BseYI | CCCAGC | 2 cut(s) | 316, 342 |
| BsgI | GTGCAG | 2 cut(s) | 148, 1241 |
| Bsh1236I | CGCG | 2 cut(s) | 151, 360 |
| Bsh1285I | CGRYCG | 2 cut(s) | 313, 1189 |
| BshFI | GGCC | 8 cut(s) | 5, 127, 294, 649, 873, 930, 998, 1085 |
| BshNI | GGYRCC | 2 cut(s) | 197, 1020 |
| BshVI | ATCGAT | 2 cut(s) | 1185, 1189 |
| BsiEI | CGRYCG | 2 cut(s) | 313, 1189 |
| BsiSI | CCGG | 4 cut(s) | 124, 192, 313, 339 |
| BslFI | GGGAC | 4 cut(s) | 254, 735, 969, 1382 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 207, 302, 848, 993 |
| BsmAI | GTCTC | 4 cut(s) | 748, 835, 928, 1111 |
| BsmFI | GGGAC | 4 cut(s) | 254, 735, 969, 1382 |
| BsmI | GAATGC | 1 cut(s) | 911 |
| BsnI | GGCC | 8 cut(s) | 5, 127, 294, 649, 873, 930, 998, 1085 |
| Bso31I | GGTCTC | 1 cut(s) | 748 |
| Bsp1286I | GDGCHC | 1 cut(s) | 309 |
| Bsp143I | GATC | 5 cut(s) | 451, 524, 580, 1066, 1186 |
| BspANI | GGCC | 8 cut(s) | 5, 127, 294, 649, 873, 930, 998, 1085 |
| BspCNI | CTCAG | 3 cut(s) | 618, 1042, 1198 |
| BspDI | ATCGAT | 2 cut(s) | 1185, 1189 |
| BspFNI | CGCG | 2 cut(s) | 151, 360 |
| BspLI | GGNNCC | 3 cut(s) | 199, 985, 1022 |
| BspMI | ACCTGC | 1 cut(s) | 773 |
| BspPI | GGATC | 2 cut(s) | 532, 575 |
| BspT107I | GGYRCC | 2 cut(s) | 197, 1020 |
| BspTNI | GGTCTC | 1 cut(s) | 748 |
| BsrBI | CCGCTC | 1 cut(s) | 156 |
| BsrDI | GCAATG | 1 cut(s) | 425 |
| BsrFI | RCCGGY | 2 cut(s) | 312, 338 |
| BsrI | ACTGG | 5 cut(s) | 484, 766, 1105, 1283, 1355 |
| BssAI | RCCGGY | 2 cut(s) | 312, 338 |
| BssECI | CCNNGG | 1 cut(s) | 520 |
| BssMI | GATC | 5 cut(s) | 451, 524, 580, 1066, 1186 |
| BssNAI | GTATAC | 2 cut(s) | 854, 1233 |
| BssNI | GRCGYC | 1 cut(s) | 198 |
| BssT1I | CCWWGG | 1 cut(s) | 520 |
| Bst1107I | GTATAC | 2 cut(s) | 854, 1233 |
| Bst4CI | ACNGT | 2 cut(s) | 169, 922 |
| Bst6I | CTCTTC | 2 cut(s) | 360, 1329 |
| BstACI | GRCGYC | 1 cut(s) | 198 |
| BstC8I | GCNNGC | 1 cut(s) | 1056 |
| BstDEI | CTNAG | 3 cut(s) | 626, 1050, 1206 |
| BstEII | GGTNACC | 1 cut(s) | 334 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 300 |
| BstF5I | GGATG | 4 cut(s) | 874, 1044, 1301, 1355 |
| BstFNI | CGCG | 2 cut(s) | 151, 360 |
| BstH2I | RGCGCY | 1 cut(s) | 201 |
| BstHHI | GCGC | 3 cut(s) | 25, 153, 200 |
| BstKTI | GATC | 5 cut(s) | 454, 527, 583, 1069, 1189 |
| BstMAI | GTCTC | 4 cut(s) | 748, 835, 928, 1111 |
| BstMBI | GATC | 5 cut(s) | 451, 524, 580, 1066, 1186 |
| BstMCI | CGRYCG | 2 cut(s) | 313, 1189 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 11, 14, 20, 133, 162, 313, 366, 1312 |
| BstNSI | RCATGY | 1 cut(s) | 1124 |
| BstPI | GGTNACC | 1 cut(s) | 334 |
| BstUI | CGCG | 2 cut(s) | 151, 360 |
| BstV1I | GCAGC | 1 cut(s) | 191 |
| BstV2I | GAAGAC | 1 cut(s) | 1149 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 728, 1290 |
| BstZ17I | GTATAC | 2 cut(s) | 854, 1233 |
| Bsu15I | ATCGAT | 2 cut(s) | 1185, 1189 |
| BsuRI | GGCC | 8 cut(s) | 5, 127, 294, 649, 873, 930, 998, 1085 |
| BsuTUI | ATCGAT | 2 cut(s) | 1185, 1189 |
| BtsCI | GGATG | 4 cut(s) | 874, 1044, 1301, 1355 |
| BtsI | GCAGTG | 1 cut(s) | 376 |
| BtsIMutI | CAGTG | 2 cut(s) | 376, 1290 |
| BveI | ACCTGC | 1 cut(s) | 773 |
| Cac8I | GCNNGC | 1 cut(s) | 1056 |
| CaiI | CAGNNNCTG | 2 cut(s) | 328, 440 |
| CfoI | GCGC | 3 cut(s) | 25, 153, 200 |
| Cfr10I | RCCGGY | 2 cut(s) | 312, 338 |
| Cfr13I | GGNCC | 5 cut(s) | 126, 210, 293, 983, 996 |
| ClaI | ATCGAT | 2 cut(s) | 1185, 1189 |
| CseI | GACGC | 1 cut(s) | 349 |
| CviAII | CATG | 6 cut(s) | 402, 1081, 1121, 1147, 1316, 1383 |
| DdeI | CTNAG | 3 cut(s) | 626, 1050, 1206 |
| DinI | GGCGCC | 1 cut(s) | 199 |
| DpnI | GATC | 5 cut(s) | 453, 526, 582, 1068, 1188 |
| DpnII | GATC | 5 cut(s) | 451, 524, 580, 1066, 1186 |
| EaeI | YGGCCR | 4 cut(s) | 3, 647, 871, 928 |
| Eam1104I | CTCTTC | 2 cut(s) | 360, 1329 |
| EarI | CTCTTC | 2 cut(s) | 360, 1329 |
| EciI | GGCGGA | 2 cut(s) | 32, 130 |
| Eco130I | CCWWGG | 1 cut(s) | 520 |
| Eco24I | GRGCYC | 1 cut(s) | 309 |
| Eco31I | GGTCTC | 1 cut(s) | 748 |
| Eco32I | GATATC | 1 cut(s) | 283 |
| Eco47I | GGWCC | 2 cut(s) | 210, 983 |
| Eco57I | CTGAAG | 2 cut(s) | 462, 1353 |
| Eco91I | GGTNACC | 1 cut(s) | 334 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 300 |
| EcoO65I | GGTNACC | 1 cut(s) | 334 |
| EcoRI | GAATTC | 2 cut(s) | 1031, 1277 |
| EcoRV | GATATC | 1 cut(s) | 283 |
| EcoT14I | CCWWGG | 1 cut(s) | 520 |
| EcoT38I | GRGCYC | 1 cut(s) | 309 |
| EgeI | GGCGCC | 1 cut(s) | 199 |
| EheI | GGCGCC | 1 cut(s) | 199 |
| ErhI | CCWWGG | 1 cut(s) | 520 |
| FaeI | CATG | 6 cut(s) | 405, 1084, 1124, 1150, 1319, 1386 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 627, 659 |
| FaqI | GGGAC | 4 cut(s) | 254, 735, 969, 1382 |
| FatI | CATG | 6 cut(s) | 401, 1080, 1120, 1146, 1315, 1382 |
| FauI | CCCGC | 2 cut(s) | 117, 141 |
| FauNDI | CATATG | 1 cut(s) | 949 |
| FbaI | TGATCA | 1 cut(s) | 451 |
| FblI | GTMKAC | 2 cut(s) | 853, 1232 |
| FokI | GGATG | 4 cut(s) | 881, 1051, 1308, 1362 |
| FriOI | GRGCYC | 1 cut(s) | 309 |
| FspBI | CTAG | 1 cut(s) | 516 |
| GlaI | GCGC | 3 cut(s) | 24, 152, 199 |
| GsaI | CCCAGC | 2 cut(s) | 320, 346 |
| GsuI | CTGGAG | 1 cut(s) | 1088 |
| HaeII | RGCGCY | 1 cut(s) | 201 |
| HaeIII | GGCC | 8 cut(s) | 5, 127, 294, 649, 873, 930, 998, 1085 |
| HapII | CCGG | 4 cut(s) | 124, 192, 313, 339 |
| HgaI | GACGC | 1 cut(s) | 349 |
| HhaI | GCGC | 3 cut(s) | 25, 153, 200 |
| Hin1I | GRCGYC | 1 cut(s) | 198 |
| Hin1II | CATG | 6 cut(s) | 405, 1084, 1124, 1150, 1319, 1386 |
| Hin6I | GCGC | 3 cut(s) | 23, 151, 198 |
| HinP1I | GCGC | 3 cut(s) | 23, 151, 198 |
| HincII | GTYRAC | 2 cut(s) | 391, 1227 |
| HindII | GTYRAC | 2 cut(s) | 391, 1227 |
| HinfI | GANTC | 6 cut(s) | 325, 352, 461, 811, 836, 1179 |
| HpaI | GTTAAC | 1 cut(s) | 391 |
| HpaII | CCGG | 4 cut(s) | 124, 192, 313, 339 |
| HphI | GGTGA | 3 cut(s) | 328, 367, 797 |
| Hpy166II | GTNNAC | 5 cut(s) | 391, 788, 854, 1227, 1233 |
| Hpy188III | TCNNGA | 4 cut(s) | 259, 409, 553, 1036 |
| Hpy8I | GTNNAC | 5 cut(s) | 391, 788, 854, 1227, 1233 |
| Hpy99I | CGWCG | 2 cut(s) | 173, 176 |
| HpyCH4III | ACNGT | 2 cut(s) | 169, 922 |
| HpyCH4IV | ACGT | 1 cut(s) | 1229 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 11, 14, 20, 133, 162, 313, 366, 1312 |
| HpyF3I | CTNAG | 3 cut(s) | 626, 1050, 1206 |
| HpySE526I | ACGT | 1 cut(s) | 1229 |
| Hsp92I | GRCGYC | 1 cut(s) | 198 |
| Hsp92II | CATG | 6 cut(s) | 405, 1084, 1124, 1150, 1319, 1386 |
| HspAI | GCGC | 3 cut(s) | 23, 151, 198 |
| KasI | GGCGCC | 1 cut(s) | 197 |
| Ksp22I | TGATCA | 1 cut(s) | 451 |
| KspAI | GTTAAC | 1 cut(s) | 391 |
| Kzo9I | GATC | 5 cut(s) | 451, 524, 580, 1066, 1186 |
| LmnI | GCTCC | 3 cut(s) | 161, 779, 824 |
| Lsp1109I | GCAGC | 1 cut(s) | 191 |
| LweI | GCATC | 3 cut(s) | 427, 1228, 1340 |
| MaeI | CTAG | 1 cut(s) | 516 |
| MaeII | ACGT | 1 cut(s) | 1229 |
| MaeIII | GTNAC | 4 cut(s) | 334, 373, 799, 885 |
| MalI | GATC | 5 cut(s) | 453, 526, 582, 1068, 1188 |
| MbiI | CCGCTC | 1 cut(s) | 156 |
| MboI | GATC | 5 cut(s) | 451, 524, 580, 1066, 1186 |
| MboII | GAAGA | 8 cut(s) | 110, 274, 347, 635, 1154, 1244, 1279, 1346 |
| MhlI | GDGCHC | 1 cut(s) | 309 |
| MlsI | TGGCCA | 1 cut(s) | 930 |
| MluNI | TGGCCA | 1 cut(s) | 930 |
| Mly113I | GGCGCC | 1 cut(s) | 198 |
| MlyI | GAGTC | 2 cut(s) | 319, 346 |
| Mox20I | TGGCCA | 1 cut(s) | 930 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1251 |
| MscI | TGGCCA | 1 cut(s) | 930 |
| MseI | TTAA | 5 cut(s) | 390, 917, 1158, 1257, 1328 |
| Msp20I | TGGCCA | 1 cut(s) | 930 |
| MspI | CCGG | 4 cut(s) | 124, 192, 313, 339 |
| Mva1269I | GAATGC | 1 cut(s) | 911 |
| MvnI | CGCG | 2 cut(s) | 151, 360 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 11, 14, 20, 133, 162, 313, 366, 1312 |
| NarI | GGCGCC | 1 cut(s) | 198 |
| NdeI | CATATG | 1 cut(s) | 949 |
| NdeII | GATC | 5 cut(s) | 451, 524, 580, 1066, 1186 |
| NlaIII | CATG | 6 cut(s) | 405, 1084, 1124, 1150, 1319, 1386 |
| NlaIV | GGNNCC | 3 cut(s) | 199, 985, 1022 |
| NmeAIII | GCCGAG | 2 cut(s) | 229, 899 |
| NmuCI | GTSAC | 3 cut(s) | 334, 373, 885 |
| NspI | RCATGY | 1 cut(s) | 1124 |
| PaqCI | CACCTGC | 1 cut(s) | 773 |
| PciI | ACATGT | 1 cut(s) | 1120 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 390 |
| PctI | GAATGC | 1 cut(s) | 911 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1251 |
| PfeI | GAWTC | 4 cut(s) | 461, 811, 836, 1179 |
| Ple19I | CGATCG | 1 cut(s) | 1189 |
| PleI | GAGTC | 2 cut(s) | 319, 346 |
| PluTI | GGCGCC | 1 cut(s) | 201 |
| PpsI | GAGTC | 2 cut(s) | 319, 346 |
| PscI | ACATGT | 1 cut(s) | 1120 |
| PspEI | GGTNACC | 1 cut(s) | 334 |
| PspFI | CCCAGC | 2 cut(s) | 316, 342 |
| PspN4I | GGNNCC | 3 cut(s) | 199, 985, 1022 |
| PspPI | GGNCC | 5 cut(s) | 126, 210, 293, 983, 996 |
| PstNI | CAGNNNCTG | 2 cut(s) | 328, 440 |
| PvuI | CGATCG | 1 cut(s) | 1189 |
| SaqAI | TTAA | 5 cut(s) | 390, 917, 1158, 1257, 1328 |
| Sau3AI | GATC | 5 cut(s) | 451, 524, 580, 1066, 1186 |
| Sau96I | GGNCC | 5 cut(s) | 126, 210, 293, 983, 996 |
| SchI | GAGTC | 2 cut(s) | 319, 346 |
| SduI | GDGCHC | 1 cut(s) | 309 |
| SfaNI | GCATC | 3 cut(s) | 427, 1228, 1340 |
| SfoI | GGCGCC | 1 cut(s) | 199 |
| SinI | GGWCC | 2 cut(s) | 210, 983 |
| SmlI | CTYRAG | 2 cut(s) | 269, 745 |
| SmoI | CTYRAG | 2 cut(s) | 269, 745 |
| SspDI | GGCGCC | 1 cut(s) | 197 |
| SspMI | CTAG | 1 cut(s) | 516 |
| StyI | CCWWGG | 1 cut(s) | 520 |
| TaaI | ACNGT | 2 cut(s) | 169, 922 |
| TaiI | ACGT | 1 cut(s) | 1232 |
| TaqI | TCGA | 6 cut(s) | 309, 384, 410, 1128, 1185, 1189 |
| TauI | GCSGC | 9 cut(s) | 8, 11, 14, 17, 156, 179, 198, 203, 294 |
| TfiI | GAWTC | 4 cut(s) | 461, 811, 836, 1179 |
| Tru1I | TTAA | 5 cut(s) | 390, 917, 1158, 1257, 1328 |
| Tru9I | TTAA | 5 cut(s) | 390, 917, 1158, 1257, 1328 |
| TscAI | CASTG | 2 cut(s) | 376, 1290 |
| TseFI | GTSAC | 3 cut(s) | 334, 373, 885 |
| TseI | GCWGC | 1 cut(s) | 179 |
| Tsp45I | GTSAC | 3 cut(s) | 334, 373, 885 |
| TspDTI | ATGAA | 3 cut(s) | 315, 370, 840 |
| TspRI | CASTG | 2 cut(s) | 376, 1290 |
| VpaK11BI | GGWCC | 2 cut(s) | 210, 983 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 300 |
| XapI | RAATTY | 5 cut(s) | 620, 1003, 1031, 1271, 1277 |
| XceI | RCATGY | 1 cut(s) | 1124 |
| XmiI | GTMKAC | 2 cut(s) | 853, 1232 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1251 |
| XspI | CTAG | 1 cut(s) | 516 |