Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0014367

Physical Location & Seq

Genomic Coordinates Forward (+)

35881863 .. 35888760

Gene Structure 6898 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G024300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGCCGCCGCCGCCTTTGCGCCACCCTCTTCTTCTCTCCGCCTCCGCTTCCTCTCCTTCTACCCCATCAGACCAATTCTCCCCCACTCCAAACCTCCTATTTTCCCGCCATTTCTTCCCCGGCCCTTCCCGCCCTCCGCCCCTCCGCGCCGCTCCTTCTGCACCGTCGTCGCCGCAGCTCTCCACTCCGGCGGCGCCGCCGAGAGGACCAAGCCGGAAATCTCGGAAAAGTGGAGGGACAGAGTTTGCGAGTTCAGGAAGAAGCTCAAGGTCGCTGATATCAAGGGCGGCCCTGATGAAGGGCTCGACCGGCTGGGCCACACTCTGGTGGTCACCGGCTGGGTTCGGACTCTTCGCGTCCAAAGCAGTGTCACCTTCATCGAGGTTAACGATGGGTCATGCCTCTCGAATATGCAATGTGTAATGGGTTCAGATGCTGAAGGCTATGATCAGGTAGAATCTGGCTCAATCACAACTGGTGCTTCGGTATGGGTGCAAGGCGTTGTAGCTACTAGCCAAGGATCAAAACAAAAAGTGGAATTGAAGGTCAAGAAAATTGTTATGATTGGAAAGAGTGATCCTTCTTATCCTATCCAAAAGAAAAGGGTCAGCAGAGAATTTCTGAGAACGAAAGCTCATCTTCGGCCAAGAACAAATACTTTTGGTGCGGTTGCAAGAGTGAGAAATGCTTTGGCTTATGCTACTCACAACTTTTTCCAAGAAAATGGATTTGTGTGGGTCTCAAGTCCCATTATTACTGGTTCAGATTGTGAAGGAGCAGGTGAACAATTCTGTGTAACTACTCTGATTCCAAGCTCCAATGAAGTCTCTGATTCTCCTATCGATGGTATACCACAAAAGGAGGATGGCCGAGTTGATTGGTCACAAGATTTCTTTGGGAAACCAGCATTCTTAACTGTCTCTGGCCAACTCAATGCTGAAACATATGCAACCGCTCTTTCTGATGTTTATACATTTGGTCCCACATTTAGGGCCGAAAATTCAAACACATCAAGGCACCTTGCTGAATTCTGGATGATTGAGCCTGAGCTTGCATTTGCTGATCTGAATGATGACATGGCCTGTGCAACTGCCTATCTCCAGTATGTAGTGAGACATGTCCTCGATAATTGCAAAGAAGACATGGATTTTTTTAATACTTGGATTGAGAAAGGAATCATCAATCGATTGACTGATGTAGCTGAGAAAGACTTTGTGCAGTTGACGTATACTGATGCAGTTGAACTTCTTCTTAAAACAAAGAAGAAATTTGAATTCCCAGTGAAGTGGGGATGTGATTTGCAGAGTGAGCATGAGCGTTATTTAACTGAAGAGGCATTTAGTGGATGCCCAGTAATTGTCAGGGACTACCCTAAGGAGATAAAAGCATTCTATATGCGGCAAAATGATGATGGAAAGACTGTGGCAGCTATGGATATGTTGGTTCCTCGGGTTGGAGAGCTTATCGGTGGAAGCCAGAGAGAAGAGAGGCTTGAATATTTAGAAGATCGGTTGGATGAATTAAAGCTGAATAAGGAGGCATACTGGTGGTATCTGGATTTGCGTCGTTATGGATCAGTTCCTCATGCGGGCTTTGGTCTTGGTTTCGAAAGGCTTGTACAATTTGCCACTGGGATAGAGAATATCAGAGATGTGATTCCTTTCCCTCGGACACCTGGATCATCAGAATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004816 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006421 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090567 GO:0099402 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2 tRNA_anti-codon

Protein Analysis

564

Amino Acids

63.36

Weight (kDa)

6.09

Isoelectric Point (pI)

43.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_anti-codon	PF01336	110 - 187	3.7e-08	OB-fold nucleic acid binding domain
tRNA-synt_2	PF00152	206 - 558	2.3e-61	tRNA synthetases class II (D, K and N)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17300 AT4G17300
fragaria_vesca	FvH4_1g25310
malus_domestica	MD06G1059300.v1.1
prunus_persica	Prupe.5G070100_v2.0.a1 Prupe.5G070100_v2.0.a1
pyrus_communis	pycom06g04930
rosa_chinensis	RchiOBHm_Chr2g0123321
rosa_multiflora	Rmu_sc0001917.1_g000001 Rmu_sc0021262.1_g000001
rosa_roxburghii	Rroxscaffold_2G00120780
rosa_rugosa	Rorug02G0244500
rosa_samantha	Rh2AG303600 Rh2BG311700 Rh2CG290200 Rh2DG327600
rosa_wichuraiana	Rw2G024300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	770
Acc36I	ACCTGC	1 cut(s)	770
AccB1I	GGYRCC	2 cut(s)	194, 1017
AccB7I	CCANNNNNTGG	1 cut(s)	325
AccBSI	CCGCTC	2 cut(s)	153, 956
AccI	GTMKAC	2 cut(s)	850, 1229
AccII	CGCG	2 cut(s)	148, 357
AclWI	GGATC	4 cut(s)	529, 572, 1582, 1687
AcoI	YGGCCR	4 cut(s)	3, 644, 868, 925
AcsI	RAATTY	6 cut(s)	617, 1000, 1028, 1268, 1274, 1688
AcuI	CTGAAG	2 cut(s)	459, 1350
AcyI	GRCGYC	1 cut(s)	195
AfaI	GTAC	1 cut(s)	1620
AfiI	CCNNNNNNNGG	7 cut(s)	204, 299, 325, 845, 990, 1454, 1589
AflIII	ACRYGT	1 cut(s)	1117
AgsI	TTSAA	5 cut(s)	544, 1005, 1244, 1274, 1496
AjnI	CCWGG	1 cut(s)	1675
AleI	CACNNNNGTG	1 cut(s)	326
Alw26I	GTCTC	4 cut(s)	745, 832, 925, 1108
AlwI	GGATC	4 cut(s)	529, 572, 1582, 1687
AlwNI	CAGNNNCTG	1 cut(s)	437
Ama87I	CYCGRG	1 cut(s)	1449
AoxI	GGCC	9 cut(s)	3, 122, 289, 316, 644, 868, 925, 993, 1080
ApeKI	GCWGC	2 cut(s)	176, 1427
ApoI	RAATTY	6 cut(s)	617, 1000, 1028, 1268, 1274, 1688
Asp700I	GAANNNNTTC	1 cut(s)	1248
AspLEI	GCGC	3 cut(s)	22, 150, 197
AspS9I	GGNCC	6 cut(s)	123, 207, 290, 316, 980, 993
AsuC2I	CCSGG	1 cut(s)	121
AsuHPI	GGTGA	3 cut(s)	325, 364, 794
AsuII	TTCGAA	1 cut(s)	1608
AvaI	CYCGRG	1 cut(s)	1449
AvaII	GGWCC	2 cut(s)	207, 980
AxyI	CCTNAGG	1 cut(s)	1374
BalI	TGGCCA	1 cut(s)	927
BanI	GGYRCC	2 cut(s)	194, 1017
BanII	GRGCYC	1 cut(s)	306
BbsI	GAAGAC	1 cut(s)	1146
BbvI	GCAGC	2 cut(s)	188, 1439
BccI	CCATC	5 cut(s)	74, 386, 839, 860, 1406
BcgI	CGANNNNNNTGC	2 cut(s)	151, 185
BciT130I	CCWGG	1 cut(s)	1677
BclI	TGATCA	1 cut(s)	448
BcnI	CCSGG	1 cut(s)	121
BcoDI	GTCTC	4 cut(s)	745, 832, 925, 1108
BfaI	CTAG	1 cut(s)	513
BfoI	RGCGCY	1 cut(s)	198
BfuAI	ACCTGC	1 cut(s)	770
Bme1390I	CCNGG	2 cut(s)	121, 1677
Bme18I	GGWCC	2 cut(s)	207, 980
BmeT110I	CYCGRG	1 cut(s)	1449
BmgT120I	GGNCC	6 cut(s)	123, 207, 290, 316, 980, 993
BmiI	GGNNCC	4 cut(s)	196, 982, 1019, 1446
BmrFI	CCNGG	2 cut(s)	121, 1677
BmrI	ACTGGG	3 cut(s)	1274, 1346, 1641
BmsI	GCATC	3 cut(s)	424, 1225, 1337
BmuI	ACTGGG	3 cut(s)	1274, 1346, 1641
BpiI	GAAGAC	1 cut(s)	1146
BpmI	CTGGAG	1 cut(s)	1085
Bpu10I	CCTNAGC	1 cut(s)	1047
Bpu14I	TTCGAA	1 cut(s)	1608
BpuEI	CTTGAG	2 cut(s)	251, 727
BpuMI	CCSGG	1 cut(s)	121
Bsa29I	ATCGAT	2 cut(s)	843, 1186
BsaHI	GRCGYC	1 cut(s)	195
BsaI	GGTCTC	1 cut(s)	745
BsaJI	CCNNGG	4 cut(s)	119, 517, 1448, 1667
BsaXI	ACNNNNNCTCC	2 cut(s)	63, 93
Bsc4I	CCNNNNNNNGG	7 cut(s)	204, 299, 325, 845, 990, 1454, 1589
Bse118I	RCCGGY	2 cut(s)	309, 335
Bse1I	ACTGG	7 cut(s)	481, 763, 1102, 1280, 1352, 1550, 1636
Bse21I	CCTNAGG	1 cut(s)	1374
Bse3DI	GCAATG	1 cut(s)	422
BseBI	CCWGG	1 cut(s)	1677
BseCI	ATCGAT	2 cut(s)	843, 1186
BseDI	CCNNGG	4 cut(s)	119, 517, 1448, 1667
BseGI	GGATG	5 cut(s)	871, 1041, 1298, 1352, 1522
BseLI	CCNNNNNNNGG	7 cut(s)	204, 299, 325, 845, 990, 1454, 1589
BseMI	GCAATG	1 cut(s)	422
BseMII	CTCAG	3 cut(s)	614, 1038, 1194
BseNI	ACTGG	7 cut(s)	481, 763, 1102, 1280, 1352, 1550, 1636
BseXI	GCAGC	2 cut(s)	188, 1439
BseYI	CCCAGC	2 cut(s)	313, 339
BsgI	GTGCAG	2 cut(s)	145, 1238
Bsh1236I	CGCG	2 cut(s)	148, 357
Bsh1285I	CGRYCG	1 cut(s)	310
BshFI	GGCC	9 cut(s)	5, 124, 291, 318, 646, 870, 927, 995, 1082
BshNI	GGYRCC	2 cut(s)	194, 1017
BshVI	ATCGAT	2 cut(s)	843, 1186
BsiEI	CGRYCG	1 cut(s)	310
BsiHKCI	CYCGRG	1 cut(s)	1449
BsiSI	CCGG	5 cut(s)	121, 189, 215, 310, 336
BslFI	GGGAC	4 cut(s)	251, 732, 966, 1379
BslI	CCNNNNNNNGG	7 cut(s)	204, 299, 325, 845, 990, 1454, 1589
BsmAI	GTCTC	4 cut(s)	745, 832, 925, 1108
BsmFI	GGGAC	4 cut(s)	251, 732, 966, 1379
BsmI	GAATGC	2 cut(s)	908, 1388
BsnI	GGCC	9 cut(s)	5, 124, 291, 318, 646, 870, 927, 995, 1082
Bso31I	GGTCTC	1 cut(s)	745
BsoBI	CYCGRG	1 cut(s)	1449
Bsp119I	TTCGAA	1 cut(s)	1608
Bsp1286I	GDGCHC	1 cut(s)	306
Bsp1407I	TGTACA	1 cut(s)	1618
Bsp143I	GATC	7 cut(s)	448, 521, 577, 1063, 1507, 1574, 1679
BspANI	GGCC	9 cut(s)	5, 124, 291, 318, 646, 870, 927, 995, 1082
BspCNI	CTCAG	3 cut(s)	615, 1039, 1195
BspDI	ATCGAT	2 cut(s)	843, 1186
BspFNI	CGCG	2 cut(s)	148, 357
BspLI	GGNNCC	4 cut(s)	196, 982, 1019, 1446
BspMI	ACCTGC	1 cut(s)	770
BspPI	GGATC	4 cut(s)	529, 572, 1582, 1687
BspT104I	TTCGAA	1 cut(s)	1608
BspT107I	GGYRCC	2 cut(s)	194, 1017
BspTNI	GGTCTC	1 cut(s)	745
BsrBI	CCGCTC	2 cut(s)	153, 956
BsrDI	GCAATG	1 cut(s)	422
BsrFI	RCCGGY	2 cut(s)	309, 335
BsrGI	TGTACA	1 cut(s)	1618
BsrI	ACTGG	7 cut(s)	481, 763, 1102, 1280, 1352, 1550, 1636
BssAI	RCCGGY	2 cut(s)	309, 335
BssECI	CCNNGG	4 cut(s)	119, 517, 1448, 1667
BssMI	GATC	7 cut(s)	448, 521, 577, 1063, 1507, 1574, 1679
BssNAI	GTATAC	2 cut(s)	851, 1230
BssNI	GRCGYC	1 cut(s)	195
BssT1I	CCWWGG	1 cut(s)	517
Bst1107I	GTATAC	2 cut(s)	851, 1230
Bst2UI	CCWGG	1 cut(s)	1677
Bst4CI	ACNGT	3 cut(s)	166, 919, 1423
Bst6I	CTCTTC	4 cut(s)	34, 357, 1326, 1479
BstACI	GRCGYC	1 cut(s)	195
BstAUI	TGTACA	1 cut(s)	1618
BstBI	TTCGAA	1 cut(s)	1608
BstC8I	GCNNGC	2 cut(s)	1053, 1591
BstDEI	CTNAG	4 cut(s)	623, 1047, 1203, 1374
BstEII	GGTNACC	1 cut(s)	331
BstENI	CCTNNNNNAGG	1 cut(s)	297
BstF5I	GGATG	5 cut(s)	871, 1041, 1298, 1352, 1522
BstFNI	CGCG	2 cut(s)	148, 357
BstH2I	RGCGCY	1 cut(s)	198
BstHHI	GCGC	3 cut(s)	22, 150, 197
BstKTI	GATC	7 cut(s)	451, 524, 580, 1066, 1510, 1577, 1682
BstMAI	GTCTC	4 cut(s)	745, 832, 925, 1108
BstMBI	GATC	7 cut(s)	448, 521, 577, 1063, 1507, 1574, 1679
BstMCI	CGRYCG	1 cut(s)	310
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 17, 130, 159, 310, 363, 1309
BstNI	CCWGG	1 cut(s)	1677
BstNSI	RCATGY	1 cut(s)	1121
BstPI	GGTNACC	1 cut(s)	331
BstSCI	CCNGG	2 cut(s)	119, 1675
BstUI	CGCG	2 cut(s)	148, 357
BstV1I	GCAGC	2 cut(s)	188, 1439
BstV2I	GAAGAC	1 cut(s)	1146
BstXI	CCANNNNNNTGG	2 cut(s)	725, 1287
BstZ17I	GTATAC	2 cut(s)	851, 1230
Bsu15I	ATCGAT	2 cut(s)	843, 1186
Bsu36I	CCTNAGG	1 cut(s)	1374
BsuRI	GGCC	9 cut(s)	5, 124, 291, 318, 646, 870, 927, 995, 1082
BsuTUI	ATCGAT	2 cut(s)	843, 1186
BtsCI	GGATG	5 cut(s)	871, 1041, 1298, 1352, 1522
BtsI	GCAGTG	1 cut(s)	373
BtsIMutI	CAGTG	3 cut(s)	373, 1287, 1629
BveI	ACCTGC	1 cut(s)	770
Cac8I	GCNNGC	2 cut(s)	1053, 1591
CaiI	CAGNNNCTG	1 cut(s)	437
CfoI	GCGC	3 cut(s)	22, 150, 197
Cfr10I	RCCGGY	2 cut(s)	309, 335
Cfr13I	GGNCC	6 cut(s)	123, 207, 290, 316, 980, 993
ClaI	ATCGAT	2 cut(s)	843, 1186
CseI	GACGC	2 cut(s)	346, 1553
Csp6I	GTAC	1 cut(s)	1619
CviAII	CATG	6 cut(s)	399, 1078, 1118, 1144, 1313, 1586
CviQI	GTAC	1 cut(s)	1619
DdeI	CTNAG	4 cut(s)	623, 1047, 1203, 1374
DinI	GGCGCC	1 cut(s)	196
DpnI	GATC	7 cut(s)	450, 523, 579, 1065, 1509, 1576, 1681
DpnII	GATC	7 cut(s)	448, 521, 577, 1063, 1507, 1574, 1679
EaeI	YGGCCR	4 cut(s)	3, 644, 868, 925
Eam1104I	CTCTTC	4 cut(s)	34, 357, 1326, 1479
EarI	CTCTTC	4 cut(s)	34, 357, 1326, 1479
EciI	GGCGGA	2 cut(s)	29, 127
Eco130I	CCWWGG	1 cut(s)	517
Eco24I	GRGCYC	1 cut(s)	306
Eco31I	GGTCTC	1 cut(s)	745
Eco32I	GATATC	1 cut(s)	280
Eco47I	GGWCC	2 cut(s)	207, 980
Eco57I	CTGAAG	2 cut(s)	459, 1350
Eco81I	CCTNAGG	1 cut(s)	1374
Eco88I	CYCGRG	1 cut(s)	1449
Eco91I	GGTNACC	1 cut(s)	331
EcoNI	CCTNNNNNAGG	1 cut(s)	297
EcoO65I	GGTNACC	1 cut(s)	331
EcoRI	GAATTC	2 cut(s)	1028, 1274
EcoRII	CCWGG	1 cut(s)	1675
EcoRV	GATATC	1 cut(s)	280
EcoT14I	CCWWGG	1 cut(s)	517
EcoT38I	GRGCYC	1 cut(s)	306
EgeI	GGCGCC	1 cut(s)	196
EheI	GGCGCC	1 cut(s)	196
ErhI	CCWWGG	1 cut(s)	517
FaeI	CATG	6 cut(s)	402, 1081, 1121, 1147, 1316, 1589
FalI	AAGNNNNNCTT	4 cut(s)	624, 656, 1476, 1508
FaqI	GGGAC	4 cut(s)	251, 732, 966, 1379
FatI	CATG	6 cut(s)	398, 1077, 1117, 1143, 1312, 1585
FauI	CCCGC	3 cut(s)	114, 138, 1582
FauNDI	CATATG	1 cut(s)	946
FbaI	TGATCA	1 cut(s)	448
FblI	GTMKAC	2 cut(s)	850, 1229
FokI	GGATG	5 cut(s)	878, 1048, 1305, 1359, 1529
FriOI	GRGCYC	1 cut(s)	306
FspBI	CTAG	1 cut(s)	513
GlaI	GCGC	3 cut(s)	21, 149, 196
GsaI	CCCAGC	2 cut(s)	317, 343
GsuI	CTGGAG	1 cut(s)	1085
HaeII	RGCGCY	1 cut(s)	198
HaeIII	GGCC	9 cut(s)	5, 124, 291, 318, 646, 870, 927, 995, 1082
HapII	CCGG	5 cut(s)	121, 189, 215, 310, 336
HgaI	GACGC	2 cut(s)	346, 1553
HhaI	GCGC	3 cut(s)	22, 150, 197
Hin1I	GRCGYC	1 cut(s)	195
Hin1II	CATG	6 cut(s)	402, 1081, 1121, 1147, 1316, 1589
Hin6I	GCGC	3 cut(s)	20, 148, 195
HinP1I	GCGC	3 cut(s)	20, 148, 195
HincII	GTYRAC	2 cut(s)	388, 1224
HindII	GTYRAC	2 cut(s)	388, 1224
HinfI	GANTC	6 cut(s)	349, 458, 808, 833, 1176, 1657
HpaI	GTTAAC	1 cut(s)	388
HpaII	CCGG	5 cut(s)	121, 189, 215, 310, 336
HphI	GGTGA	3 cut(s)	325, 364, 794
Hpy166II	GTNNAC	5 cut(s)	388, 785, 851, 1224, 1230
Hpy188III	TCNNGA	5 cut(s)	256, 406, 550, 1033, 1556
Hpy8I	GTNNAC	5 cut(s)	388, 785, 851, 1224, 1230
Hpy99I	CGWCG	3 cut(s)	170, 173, 1569
HpyAV	CCTTC	9 cut(s)	67, 136, 166, 293, 385, 434, 538, 591, 767
HpyCH4III	ACNGT	3 cut(s)	166, 919, 1423
HpyCH4IV	ACGT	1 cut(s)	1226
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 17, 130, 159, 310, 363, 1309
HpyF3I	CTNAG	4 cut(s)	623, 1047, 1203, 1374
HpySE526I	ACGT	1 cut(s)	1226
Hsp92I	GRCGYC	1 cut(s)	195
Hsp92II	CATG	6 cut(s)	402, 1081, 1121, 1147, 1316, 1589
HspAI	GCGC	3 cut(s)	20, 148, 195
KasI	GGCGCC	1 cut(s)	194
Ksp22I	TGATCA	1 cut(s)	448
KspAI	GTTAAC	1 cut(s)	388
Kzo9I	GATC	7 cut(s)	448, 521, 577, 1063, 1507, 1574, 1679
LmnI	GCTCC	3 cut(s)	158, 776, 821
Lsp1109I	GCAGC	2 cut(s)	188, 1439
LweI	GCATC	3 cut(s)	424, 1225, 1337
MaeI	CTAG	1 cut(s)	513
MaeII	ACGT	1 cut(s)	1226
MaeIII	GTNAC	4 cut(s)	331, 370, 796, 882
MalI	GATC	7 cut(s)	450, 523, 579, 1065, 1509, 1576, 1681
MbiI	CCGCTC	2 cut(s)	153, 956
MboI	GATC	7 cut(s)	448, 521, 577, 1063, 1507, 1574, 1679
MhlI	GDGCHC	1 cut(s)	306
MlsI	TGGCCA	1 cut(s)	927
MluNI	TGGCCA	1 cut(s)	927
Mly113I	GGCGCC	1 cut(s)	195
MlyI	GAGTC	1 cut(s)	343
MmeI	TCCRAC	2 cut(s)	1435, 1494
Mox20I	TGGCCA	1 cut(s)	927
MroXI	GAANNNNTTC	1 cut(s)	1248
MscI	TGGCCA	1 cut(s)	927
MseI	TTAA	7 cut(s)	387, 914, 1155, 1254, 1325, 1523, 1693
MslI	CAYNNNNRTG	2 cut(s)	326, 1546
Msp20I	TGGCCA	1 cut(s)	927
MspI	CCGG	5 cut(s)	121, 189, 215, 310, 336
MspR9I	CCNGG	2 cut(s)	121, 1677
Mva1269I	GAATGC	2 cut(s)	908, 1388
MvaI	CCWGG	1 cut(s)	1677
MvnI	CGCG	2 cut(s)	148, 357
MwoI	GCNNNNNNNGC	7 cut(s)	11, 17, 130, 159, 310, 363, 1309
NarI	GGCGCC	1 cut(s)	195
NciI	CCSGG	1 cut(s)	121
NdeI	CATATG	1 cut(s)	946
NdeII	GATC	7 cut(s)	448, 521, 577, 1063, 1507, 1574, 1679
NlaIII	CATG	6 cut(s)	402, 1081, 1121, 1147, 1316, 1589
NlaIV	GGNNCC	4 cut(s)	196, 982, 1019, 1446
NmeAIII	GCCGAG	2 cut(s)	226, 896
NmuCI	GTSAC	3 cut(s)	331, 370, 882
NspI	RCATGY	1 cut(s)	1121
NspV	TTCGAA	1 cut(s)	1608
OliI	CACNNNNGTG	1 cut(s)	326
PaqCI	CACCTGC	1 cut(s)	770
PciI	ACATGT	1 cut(s)	1117
PcsI	WCGNNNNNNNCGW	1 cut(s)	387
PctI	GAATGC	2 cut(s)	908, 1388
PdmI	GAANNNNTTC	1 cut(s)	1248
PfeI	GAWTC	5 cut(s)	458, 808, 833, 1176, 1657
PflMI	CCANNNNNTGG	1 cut(s)	325
PleI	GAGTC	1 cut(s)	343
PluTI	GGCGCC	1 cut(s)	198
PpsI	GAGTC	1 cut(s)	343
PscI	ACATGT	1 cut(s)	1117
Psp6I	CCWGG	1 cut(s)	1675
PspEI	GGTNACC	1 cut(s)	331
PspFI	CCCAGC	2 cut(s)	313, 339
PspGI	CCWGG	1 cut(s)	1675
PspN4I	GGNNCC	4 cut(s)	196, 982, 1019, 1446
PspPI	GGNCC	6 cut(s)	123, 207, 290, 316, 980, 993
PstNI	CAGNNNCTG	1 cut(s)	437
RsaI	GTAC	1 cut(s)	1620
RsaNI	GTAC	1 cut(s)	1619
RseI	CAYNNNNRTG	2 cut(s)	326, 1546
SaqAI	TTAA	7 cut(s)	387, 914, 1155, 1254, 1325, 1523, 1693
Sau3AI	GATC	7 cut(s)	448, 521, 577, 1063, 1507, 1574, 1679
Sau96I	GGNCC	6 cut(s)	123, 207, 290, 316, 980, 993
SchI	GAGTC	1 cut(s)	343
ScrFI	CCNGG	2 cut(s)	121, 1677
SduI	GDGCHC	1 cut(s)	306
SfaNI	GCATC	3 cut(s)	424, 1225, 1337
SfoI	GGCGCC	1 cut(s)	196
SfuI	TTCGAA	1 cut(s)	1608
SinI	GGWCC	2 cut(s)	207, 980
SmiMI	CAYNNNNRTG	2 cut(s)	326, 1546
SmlI	CTYRAG	2 cut(s)	266, 742
SmoI	CTYRAG	2 cut(s)	266, 742
SspDI	GGCGCC	1 cut(s)	194
SspI	AATATT	1 cut(s)	1499
SspMI	CTAG	1 cut(s)	513
StyD4I	CCNGG	2 cut(s)	119, 1675
StyI	CCWWGG	1 cut(s)	517
TaaI	ACNGT	3 cut(s)	166, 919, 1423
TaiI	ACGT	1 cut(s)	1229
TaqI	TCGA	7 cut(s)	306, 381, 407, 843, 1125, 1186, 1608
TatI	WGTACW	1 cut(s)	1618
TauI	GCSGC	9 cut(s)	8, 11, 14, 153, 176, 195, 200, 291, 1402
TfiI	GAWTC	5 cut(s)	458, 808, 833, 1176, 1657
Tru1I	TTAA	7 cut(s)	387, 914, 1155, 1254, 1325, 1523, 1693
Tru9I	TTAA	7 cut(s)	387, 914, 1155, 1254, 1325, 1523, 1693
TscAI	CASTG	3 cut(s)	373, 1287, 1636
TseFI	GTSAC	3 cut(s)	331, 370, 882
TseI	GCWGC	2 cut(s)	176, 1427
Tsp45I	GTSAC	3 cut(s)	331, 370, 882
TspDTI	ATGAA	4 cut(s)	312, 367, 837, 1533
TspRI	CASTG	3 cut(s)	373, 1287, 1636
Van91I	CCANNNNNTGG	1 cut(s)	325
VpaK11BI	GGWCC	2 cut(s)	207, 980
XagI	CCTNNNNNAGG	1 cut(s)	297
XapI	RAATTY	6 cut(s)	617, 1000, 1028, 1268, 1274, 1688
XceI	RCATGY	1 cut(s)	1121
XmiI	GTMKAC	2 cut(s)	850, 1229
XmnI	GAANNNNTTC	1 cut(s)	1248
XspI	CTAG	1 cut(s)	513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.