Rh2DG601400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
83335376 .. 83336708
1333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG601400.1

Sequence Viewer

Length: 258 bp
ATGTGTGCTGAATATGTGACCTTTGGATTGATGTTCAGTTCTTTGGGAATGTGCAAGAGATGTGGTAATGTAAGGAGGATAGCATGCTCAACATGTAGAGGAACTGGATTGGTTAAGGAAGGTGGAGTAGCCGGTTTTAATCTCATTGATGACTTGTATCAATCGCTAGGGGGTGATGAATCGAAAGTAAGATCCATTGCTTGCACCAAATGTCAAGCTAAAGGTCATTTTAGCTGCCCTGATTGCTCTAAAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

85

Amino Acids

9.07

Weight (kDa)

8.63

Isoelectric Point (pI)

49.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010379)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 186
AflIII ACRYGT 1 cut(s) 92
AluBI AGCT 2 cut(s) 218, 234
AluI AGCT 2 cut(s) 218, 234
AlwI GGATC 1 cut(s) 186
ApeKI GCWGC 1 cut(s) 234
AsuHPI GGTGA 1 cut(s) 185
BbvI GCAGC 1 cut(s) 221
BfaI CTAG 1 cut(s) 167
BisI GCNGC 1 cut(s) 235
BlsI GCNGC 1 cut(s) 236
Bse118I RCCGGY 1 cut(s) 131
Bse1I ACTGG 1 cut(s) 109
Bse3DI GCAATG 1 cut(s) 195
BseMI GCAATG 1 cut(s) 195
BseNI ACTGG 1 cut(s) 109
BseXI GCAGC 1 cut(s) 221
BsiSI CCGG 1 cut(s) 132
Bsp143I GATC 1 cut(s) 191
BspPI GGATC 1 cut(s) 186
BsrDI GCAATG 1 cut(s) 195
BsrFI RCCGGY 1 cut(s) 131
BsrI ACTGG 1 cut(s) 109
BssAI RCCGGY 1 cut(s) 131
BssMI GATC 1 cut(s) 191
BstC8I GCNNGC 2 cut(s) 85, 202
BstKTI GATC 1 cut(s) 194
BstMBI GATC 1 cut(s) 191
BstMWI GCNNNNNNNGC 1 cut(s) 243
BstNSI RCATGY 2 cut(s) 87, 96
BstV1I GCAGC 1 cut(s) 221
BstX2I RGATCY 1 cut(s) 191
BstYI RGATCY 1 cut(s) 191
Cac8I GCNNGC 2 cut(s) 85, 202
Cfr10I RCCGGY 1 cut(s) 131
CspCI CAANNNNNGTGG 2 cut(s) 43, 78
CviAII CATG 2 cut(s) 84, 93
CviJI RGCY 3 cut(s) 131, 218, 234
CviKI_1 RGCY 3 cut(s) 131, 218, 234
DpnI GATC 1 cut(s) 193
DpnII GATC 1 cut(s) 191
FaeI CATG 2 cut(s) 87, 96
FaiI YATR 4 cut(s) 15, 85, 94, 256
FatI CATG 2 cut(s) 83, 92
Fnu4HI GCNGC 1 cut(s) 235
Fsp4HI GCNGC 1 cut(s) 235
FspBI CTAG 1 cut(s) 167
GluI GCNGC 1 cut(s) 235
HapII CCGG 1 cut(s) 132
Hin1II CATG 2 cut(s) 87, 96
HinfI GANTC 1 cut(s) 179
HpaII CCGG 1 cut(s) 132
HphI GGTGA 1 cut(s) 185
HpyAV CCTTC 1 cut(s) 113
HpyCH4V TGCA 2 cut(s) 54, 204
HpyF10VI GCNNNNNNNGC 1 cut(s) 243
Hsp92II CATG 2 cut(s) 87, 96
Kzo9I GATC 1 cut(s) 191
LpnPI CCDG 3 cut(s) 90, 145, 252
Lsp1109I GCAGC 1 cut(s) 221
MaeI CTAG 1 cut(s) 167
MaeIII GTNAC 1 cut(s) 16
MalI GATC 1 cut(s) 193
MboI GATC 1 cut(s) 191
MflI RGATCY 1 cut(s) 191
MnlI CCTC 2 cut(s) 69, 92
MseI TTAA 2 cut(s) 114, 138
MspI CCGG 1 cut(s) 132
MwoI GCNNNNNNNGC 1 cut(s) 243
NdeII GATC 1 cut(s) 191
NlaIII CATG 2 cut(s) 87, 96
NmuCI GTSAC 1 cut(s) 16
NspI RCATGY 2 cut(s) 87, 96
PaeI GCATGC 1 cut(s) 87
PciI ACATGT 1 cut(s) 92
PfeI GAWTC 1 cut(s) 179
PkrI GCNGC 1 cut(s) 236
PscI ACATGT 1 cut(s) 92
PsuI RGATCY 1 cut(s) 191
SaqAI TTAA 2 cut(s) 114, 138
SatI GCNGC 1 cut(s) 235
Sau3AI GATC 1 cut(s) 191
SetI ASST 5 cut(s) 23, 124, 220, 226, 236
SphI GCATGC 1 cut(s) 87
SspMI CTAG 1 cut(s) 167
TaqI TCGA 1 cut(s) 182
TfiI GAWTC 1 cut(s) 179
Tru1I TTAA 2 cut(s) 114, 138
Tru9I TTAA 2 cut(s) 114, 138
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 1 cut(s) 234
Tsp45I GTSAC 1 cut(s) 16
TspDTI ATGAA 1 cut(s) 192
XceI RCATGY 2 cut(s) 87, 96
XspI CTAG 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.