Rh3AG330500

Ankyrin repeats (many copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0004406
Physical Location & Seq
Forward (+)
47559993 .. 47568951
8959 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG330500.1

Sequence Viewer

Length: 2496 bp
ATGGATGTTTCACTTCAAGGAAAAAAGCAGAATTTGCAGACACATGCTCGTAGTAAAGTTTTGTCAAGGGGAGCCCACAAAGATCTGTGGCTTGTTGTGCAAGAAGGGTCATTGGCTGATGTGGATTCAGCACTAGCCTTTGTGAAGAAGAGTGGTGGTAATATTAATTCAAGAAACATATTTGGTCTCACTCCTCTTCATATTGCAACCTGGAGAAATCACATTCCCATTGTTAGGAGGCTTCTTGCAGCTGGTGCTGACCCAGATGCTAGGGATGGGGAATCAGGATGGAGTAGCCTTCACAGAGCTCTGCATTTTGGTCATCTTGCTGTGGCAAGTATACTTCTCCAGTGTGGTGCTTCTATCACACTGGAGGACTCTAAATACCGAACACCTGTTGATCTGATATCTGGGCCTGTGTTGCAAGTTCTTGGTAGTGGACAGACTTCAGTAACTACAGAGGTTTTCAGTTGGGGAAGTGGCACAAACTATCAACTTGGAACTGGAAATGCACACATACAAAAGTTGCCATGCAAGGTTGATGCTCTTCATGATTCTCTAATCAAGTTCGTTTCTGCCGCTAAATTCCATAGTGTAGCAGTCACTGCTCGAGGAGAAGTCTATACTTGGGGATTTGGAAGAGGAGGACGACTTGGGCACCCTGATTTTGATATACACAGCGGTCAAGCTGCGGTTATCACTCCTCGGCAGGTAACGTCTGTTCTAGGGTCCCGTCGTGTGAAGGCAGTTGCTGCAGCTAAACATCACACTGTTATTGCAACAGATGTTGGGGAGGTGTTCACCTGGGGATCCAACCGAGAGGGTCAGCTTGGCTACACTTCTGTGGACACCCAACCTACACCTCGTAGGGTGAGTTCCCTCAGGTCGAAGGTTGTTGCTGTTGCTGCAGCAAACAAGCACACTGCTGTTGTTTCTGATACAGGTGAAGTTTTCACATGGGGTGGCAACAGAGAGGGCCAGCTTGGCTATGGTACATCCAACTCTGCATCAAACTACACTCCTAGAGTGGTTGAATATTTGAAAGGCAAGGTTTTTACTGGGGTTGCAGCAGCAAAATATCACACACTTGTCTTGGGAGTTGATGGAGAGGTTTACACTTGGGGTCATCGACTCGTTACGCCAAAACGGGTTGTTGTCTCTAGAAATTTGAAAAAGGGTGGAAATTCCACTTTGAAGTTTCATCGCAAGGAACGGCTCCATGTGGTTTCAATAGCTGCGGGGGTGGTACATAGCATGGCTCTCACCGATGATGGTGCTTTGTTTTATTGGGTTTCTTCGGATCCTGATCTTAGATGCCAACAGCTTTACTCGCTGTGCGGAAGAAATTTGGTGAACATATCTGCAGGGAAGTACTGGACTGCCGCTGTTACAGCTACAGGTGATGTTTACACGTGGGATGGGAAAAATGGTAAGGATAAGCCACCAATTGCAACTCGGTTACATGGTACAAAGCGGGCTACTTCCGTTTCAGTTGGTGAAACGCATTTGTTAATTATTGGTTCTCTTTATCATCCTGCCTACACTTCCAATGTGGTGGAGGTTCCACAGAAGAAGTCAATTATCAGAGATGAACTAGAAGAAATTGATGAAGATCTTATGTTTGATGACATGTGCTCAGAGAATCCTTTACCTATTGTACAAGATGATGATTCCAGCAAGAAAGCTGTACCAAGCTTAAAAAGTATTTGTGAAAAAGTGGCTGCAGAGAAATTAGTGGAGCCACGAAATGCTATTCAACTGCTTGAAATTGCAGATTCACTCATGGCAGATGATCTAAGGAAGTATTGTGAGGAAATTGCTATACGGAACCTTGACTATATTTTCACTGTATCATCACAAGCTATTGCTGGAGCTTCACCAGATATTCTAGCTAACCTCGAAAAATCATTGGATTTGAAGTCATCTGAACCATGGAGCTACCGTCGTCTCCCAACTCCAACAGCTACTTTCCCTGCTGTTATTTATAGTGAGGAGGAATGTAGTGAGAGTGAGGTTCAAAGAACACGTGACAGCCATACCAAGCAATCTACCTCCAAAAATGGAATACACCACAGACCAGATTCCTTTCTACAACCCAAAGATGATCCAAATCAAGGTATTGGCAAGGAAGTTCGAGCCTTGCGGAAAAAGCTGCAGCAGATTGAGATGCTTGAAGAAAAACAATCTAATGGGTATCTTCTTGATGACCAGCAAATTAAAAAGCTTCAAACAAGGTCAGCTCTGGAGAGTTCACTTGCTGAGCTCGGGGTTCCAGTTGAGACAACAGAGTTGAAGGCATCATCTTCAGTGCTGCCAGATGGAAAAGGAAACAAAAAGGTTGAGCTTCCAAGAAAACAGAGGAGAAAGAACAAACAGACCGCAATGCAAGTGCCTCGGTTTCCTGGAAGTGAAGCAGAACCAAACTCAGTAAAAGGTTTTTTGAATAGTGGAATCTCTCAAAACTCAGAGAATAAGGTAAGCAGACTAATAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_4 Ank_5 RCC1

Protein Analysis

831

Amino Acids

90.79

Weight (kDa)

9.1

Isoelectric Point (pI)

34.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 32 - 126 3.7e-12 Ankyrin repeats (3 copies)
Ank_5 PF13857 53 - 103 8.9e-08 Ankyrin repeats (many copies)
Ank PF00023 62 - 92 8.7e-08 Ankyrin repeat
Ank_4 PF13637 73 - 116 8.7e-08 Ankyrin repeats (many copies)
WD40_RLD PF25390 152 - 239 4.5e-15 RCC1-like domain
RCC1 PF00415 154 - 201 2.3e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 205 - 259 5.4e-09 Regulator of chromosome condensation (RCC1) repeat
WD40_RLD PF25390 234 - 430 1.5e-40 RCC1-like domain
RCC1 PF00415 264 - 311 2.9e-13 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 298 - 327 3.2e-06 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 315 - 365 1.3e-11 Regulator of chromosome condensation (RCC1) repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 700
AccB1I GGYRCC 1 cut(s) 657
AccI GTMKAC 1 cut(s) 340
AciI CCGC 9 cut(s) 579, 681, 692, 1238, 1338, 1383, 1474, 2143, 2379
AclWI GGATC 5 cut(s) 804, 817, 1295, 1308, 2099
AcsI RAATTY 5 cut(s) 31, 584, 1165, 1183, 1345
AcuI CTGAAG 2 cut(s) 432, 2289
AcvI CACGTG 2 cut(s) 1413, 2027
AfaI GTAC 6 cut(s) 994, 1248, 1373, 1468, 1659, 1689
AfiI CCNNNNNNNGG 2 cut(s) 234, 2114
AflIII ACRYGT 3 cut(s) 1410, 1629, 2024
AjnI CCWGG 3 cut(s) 209, 803, 2401
AleI CACNNNNGTG 1 cut(s) 842
Alw21I GWGCWC 3 cut(s) 310, 1637, 2265
Alw26I GTCTC 4 cut(s) 191, 1162, 1952, 2273
AlwI GGATC 5 cut(s) 804, 817, 1295, 1308, 2099
AlwNI CAGNNNCTG 2 cut(s) 605, 752
Ama87I CYCGRG 2 cut(s) 609, 2264
AoxI GGCC 2 cut(s) 413, 976
ApoI RAATTY 5 cut(s) 31, 584, 1165, 1183, 1345
AseI ATTAAT 1 cut(s) 165
AspS9I GGNCC 3 cut(s) 413, 729, 976
AsuHPI GGTGA 8 cut(s) 793, 883, 956, 1255, 1363, 1412, 1508, 1869
AvaI CYCGRG 2 cut(s) 609, 2264
AvaII GGWCC 1 cut(s) 729
AxyI CCTNAGG 1 cut(s) 881
BaeGI GKGCMC 1 cut(s) 660
BamHI GGATCC 2 cut(s) 809, 1300
BanI GGYRCC 1 cut(s) 657
BanII GRGCYC 3 cut(s) 76, 310, 2265
BbrPI CACGTG 2 cut(s) 1413, 2027
Bbv12I GWGCWC 3 cut(s) 310, 1637, 2265
BccI CCATC 6 cut(s) 269, 282, 1097, 1265, 1412, 2312
BceAI ACGGC 1 cut(s) 1229
BcgI CGANNNNNNTGC 4 cut(s) 1256, 1290, 2375, 2409
BciT130I CCWGG 3 cut(s) 211, 805, 2403
BcoDI GTCTC 4 cut(s) 191, 1162, 1952, 2273
BfaI CTAG 7 cut(s) 134, 270, 725, 1023, 1161, 1595, 1889
BfmI CTRYAG 7 cut(s) 456, 753, 906, 1362, 1395, 1722, 2153
BfuAI ACCTGC 1 cut(s) 700
BglI GCCNNNNNGGC 1 cut(s) 984
BglII AGATCT 2 cut(s) 82, 1612
BlpI GCTNAGC 1 cut(s) 2259
BmcAI AGTACT 1 cut(s) 1373
Bme1390I CCNGG 3 cut(s) 211, 805, 2403
Bme18I GGWCC 1 cut(s) 729
BmeT110I CYCGRG 2 cut(s) 609, 2264
BmgT120I GGNCC 3 cut(s) 413, 729, 976
BmrFI CCNGG 3 cut(s) 211, 805, 2403
BmrI ACTGGG 1 cut(s) 1068
BmsI GCATC 6 cut(s) 256, 532, 1016, 1304, 2157, 2306
BmuI ACTGGG 1 cut(s) 1068
BpmI CTGGAG 5 cut(s) 232, 332, 392, 1890, 2264
Bpu1102I GCTNAGC 1 cut(s) 2259
BsaAI YACGTR 2 cut(s) 1413, 2027
BsaBI GATNNNNATC 3 cut(s) 1305, 1611, 2109
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 4 cut(s) 704, 804, 1931, 2393
BsaXI ACNNNNNCTCC 2 cut(s) 1927, 1957
Bsc4I CCNNNNNNNGG 2 cut(s) 234, 2114
Bse1I ACTGG 6 cut(s) 349, 375, 508, 1063, 1379, 2273
Bse21I CCTNAGG 1 cut(s) 881
Bse3DI GCAATG 1 cut(s) 2388
Bse8I GATNNNNATC 3 cut(s) 1305, 1611, 2109
BseBI CCWGG 3 cut(s) 211, 805, 2403
BseDI CCNNGG 4 cut(s) 704, 804, 1931, 2393
BseGI GGATG 6 cut(s) 10, 280, 293, 995, 1423, 1531
BseJI GATNNNNATC 3 cut(s) 1305, 1611, 2109
BseLI CCNNNNNNNGG 2 cut(s) 234, 2114
BseMI GCAATG 1 cut(s) 2388
BseMII CTCAG 5 cut(s) 895, 1650, 2250, 2439, 2478
BseNI ACTGG 6 cut(s) 349, 375, 508, 1063, 1379, 2273
BseRI GAGGAG 6 cut(s) 183, 627, 657, 693, 2006, 2374
BseSI GKGCMC 1 cut(s) 660
BshFI GGCC 2 cut(s) 415, 978
BshNI GGYRCC 1 cut(s) 657
BsiHKAI GWGCWC 3 cut(s) 310, 1637, 2265
BsiHKCI CYCGRG 2 cut(s) 609, 2264
BslFI GGGAC 1 cut(s) 715
BslI CCNNNNNNNGG 2 cut(s) 234, 2114
BsmAI GTCTC 4 cut(s) 191, 1162, 1952, 2273
BsmBI CGTCTC 1 cut(s) 1952
BsmFI GGGAC 1 cut(s) 715
BsnI GGCC 2 cut(s) 415, 978
Bso31I GGTCTC 1 cut(s) 191
BsoBI CYCGRG 2 cut(s) 609, 2264
Bsp1286I GDGCHC 5 cut(s) 76, 310, 660, 1637, 2265
Bsp1407I TGTACA 1 cut(s) 1657
Bsp143I GATC 8 cut(s) 82, 400, 809, 1300, 1306, 1612, 1792, 2104
Bsp1720I GCTNAGC 1 cut(s) 2259
Bsp19I CCATGG 1 cut(s) 1931
BspACI CCGC 9 cut(s) 579, 681, 692, 1238, 1338, 1383, 1474, 2143, 2379
BspANI GGCC 2 cut(s) 415, 978
BspCNI CTCAG 5 cut(s) 894, 1649, 2251, 2438, 2477
BspHI TCATGA 1 cut(s) 550
BspMAI CTGCAG 5 cut(s) 757, 910, 1366, 1726, 2157
BspMI ACCTGC 1 cut(s) 700
BspPI GGATC 5 cut(s) 804, 817, 1295, 1308, 2099
BspQI GCTCTTC 1 cut(s) 552
BspT107I GGYRCC 1 cut(s) 657
BspTNI GGTCTC 1 cut(s) 191
BsrDI GCAATG 1 cut(s) 2388
BsrGI TGTACA 1 cut(s) 1657
BsrI ACTGG 6 cut(s) 349, 375, 508, 1063, 1379, 2273
BssECI CCNNGG 4 cut(s) 704, 804, 1931, 2393
BssMI GATC 8 cut(s) 82, 400, 809, 1300, 1306, 1612, 1792, 2104
BssNAI GTATAC 1 cut(s) 341
BssT1I CCWWGG 1 cut(s) 1931
Bst1107I GTATAC 1 cut(s) 341
Bst2UI CCWGG 3 cut(s) 211, 805, 2403
Bst4CI ACNGT 3 cut(s) 772, 1849, 1943
Bst6I CTCTTC 4 cut(s) 143, 201, 552, 634
BstAPI GCANNNNNTGC 4 cut(s) 34, 254, 605, 752
BstAUI TGTACA 1 cut(s) 1657
BstBAI YACGTR 2 cut(s) 1413, 2027
BstC8I GCNNGC 2 cut(s) 980, 1476
BstDEI CTNAG 7 cut(s) 881, 1310, 1636, 1796, 2259, 2425, 2464
BstDSI CCRYGG 1 cut(s) 1931
BstF5I GGATG 6 cut(s) 10, 280, 293, 995, 1423, 1531
BstKTI GATC 8 cut(s) 85, 403, 812, 1303, 1309, 1615, 1795, 2107
BstMAI GTCTC 4 cut(s) 191, 1162, 1952, 2273
BstMBI GATC 8 cut(s) 82, 400, 809, 1300, 1306, 1612, 1792, 2104
BstNI CCWGG 3 cut(s) 211, 805, 2403
BstNSI RCATGY 2 cut(s) 47, 1633
BstSCI CCNGG 3 cut(s) 209, 803, 2401
BstSFI CTRYAG 7 cut(s) 456, 753, 906, 1362, 1395, 1722, 2153
BstSLI GKGCMC 1 cut(s) 660
BstX2I RGATCY 4 cut(s) 82, 809, 1300, 1612
BstXI CCANNNNNNTGG 1 cut(s) 1555
BstYI RGATCY 4 cut(s) 82, 809, 1300, 1612
BstZ17I GTATAC 1 cut(s) 341
Bsu36I CCTNAGG 1 cut(s) 881
BsuRI GGCC 2 cut(s) 415, 978
BtgI CCRYGG 1 cut(s) 1931
BtgZI GCGATG 1 cut(s) 1187
BtsCI GGATG 6 cut(s) 10, 280, 293, 995, 1423, 1531
BtsI GCAGTG 2 cut(s) 603, 921
BtsIMutI CAGTG 7 cut(s) 356, 368, 603, 768, 921, 1845, 2313
BveI ACCTGC 1 cut(s) 700
Cac8I GCNNGC 2 cut(s) 980, 1476
CaiI CAGNNNCTG 2 cut(s) 605, 752
CciI TCATGA 1 cut(s) 550
Cfr13I GGNCC 3 cut(s) 413, 729, 976
Csp6I GTAC 6 cut(s) 993, 1247, 1372, 1467, 1658, 1688
CviQI GTAC 6 cut(s) 993, 1247, 1372, 1467, 1658, 1688
DdeI CTNAG 7 cut(s) 881, 1310, 1636, 1796, 2259, 2425, 2464
DpnI GATC 8 cut(s) 84, 402, 811, 1302, 1308, 1614, 1794, 2106
DpnII GATC 8 cut(s) 82, 400, 809, 1300, 1306, 1612, 1792, 2104
Eam1104I CTCTTC 4 cut(s) 143, 201, 552, 634
EarI CTCTTC 4 cut(s) 143, 201, 552, 634
Ecl136II GAGCTC 2 cut(s) 308, 2263
Eco130I CCWWGG 1 cut(s) 1931
Eco24I GRGCYC 3 cut(s) 76, 310, 2265
Eco31I GGTCTC 1 cut(s) 191
Eco32I GATATC 1 cut(s) 408
Eco47I GGWCC 1 cut(s) 729
Eco53kI GAGCTC 2 cut(s) 308, 2263
Eco57I CTGAAG 2 cut(s) 432, 2289
Eco72I CACGTG 2 cut(s) 1413, 2027
Eco81I CCTNAGG 1 cut(s) 881
Eco88I CYCGRG 2 cut(s) 609, 2264
EcoICRI GAGCTC 2 cut(s) 308, 2263
EcoO109I RGGNCCY 1 cut(s) 729
EcoRII CCWGG 3 cut(s) 209, 803, 2401
EcoRV GATATC 1 cut(s) 408
EcoT14I CCWWGG 1 cut(s) 1931
EcoT38I GRGCYC 3 cut(s) 76, 310, 2265
ErhI CCWWGG 1 cut(s) 1931
Esp3I CGTCTC 1 cut(s) 1952
FaqI GGGAC 1 cut(s) 715
FauI CCCGC 2 cut(s) 1231, 1467
FblI GTMKAC 1 cut(s) 340
FokI GGATG 6 cut(s) 17, 287, 300, 982, 1430, 1518
FriOI GRGCYC 3 cut(s) 76, 310, 2265
FspBI CTAG 7 cut(s) 134, 270, 725, 1023, 1161, 1595, 1889
GsuI CTGGAG 5 cut(s) 232, 332, 392, 1890, 2264
HaeIII GGCC 2 cut(s) 415, 978
HindIII AAGCTT 2 cut(s) 1693, 2222
HphI GGTGA 8 cut(s) 793, 883, 956, 1255, 1363, 1412, 1508, 1869
Hpy166II GTNNAC 8 cut(s) 341, 440, 801, 847, 1114, 1354, 1408, 2252
Hpy188I TCNGA 7 cut(s) 405, 937, 1300, 1586, 1639, 1927, 2467
Hpy188III TCNNGA 7 cut(s) 171, 285, 551, 1161, 1304, 2201, 2243
Hpy8I GTNNAC 8 cut(s) 341, 440, 801, 847, 1114, 1354, 1408, 2252
Hpy99I CGWCG 2 cut(s) 738, 1947
HpyAV CCTTC 5 cut(s) 98, 308, 736, 883, 2287
HpyCH4III ACNGT 3 cut(s) 772, 1849, 1943
HpyCH4IV ACGT 3 cut(s) 716, 1412, 2026
HpyF3I CTNAG 7 cut(s) 881, 1310, 1636, 1796, 2259, 2425, 2464
HpySE526I ACGT 3 cut(s) 716, 1412, 2026
KflI GGGWCCC 1 cut(s) 729
Kzo9I GATC 8 cut(s) 82, 400, 809, 1300, 1306, 1612, 1792, 2104
LguI GCTCTTC 1 cut(s) 552
LmnI GCTCC 5 cut(s) 71, 1221, 1738, 1871, 1935
LweI GCATC 6 cut(s) 256, 532, 1016, 1304, 2157, 2306
MaeI CTAG 7 cut(s) 134, 270, 725, 1023, 1161, 1595, 1889
MaeII ACGT 3 cut(s) 716, 1412, 2026
MaeIII GTNAC 7 cut(s) 451, 601, 712, 1135, 1387, 1458, 2027
MalI GATC 8 cut(s) 84, 402, 811, 1302, 1308, 1614, 1794, 2106
MboI GATC 8 cut(s) 82, 400, 809, 1300, 1306, 1612, 1792, 2104
MfeI CAATTG 1 cut(s) 1446
MflI RGATCY 4 cut(s) 82, 809, 1300, 1612
MhlI GDGCHC 5 cut(s) 76, 310, 660, 1637, 2265
MlyI GAGTC 2 cut(s) 371, 1125
MmeI TCCRAC 3 cut(s) 837, 1023, 1982
MseI TTAA 4 cut(s) 165, 1511, 1697, 2217
MslI CAYNNNNRTG 1 cut(s) 842
MspA1I CMGCKG 3 cut(s) 251, 681, 1385
MspR9I CCNGG 3 cut(s) 211, 805, 2403
MunI CAATTG 1 cut(s) 1446
MvaI CCWGG 3 cut(s) 211, 805, 2403
NcoI CCATGG 1 cut(s) 1931
NdeII GATC 8 cut(s) 82, 400, 809, 1300, 1306, 1612, 1792, 2104
NmeAIII GCCGAG 1 cut(s) 685
NmuCI GTSAC 2 cut(s) 601, 2027
NspI RCATGY 2 cut(s) 47, 1633
OliI CACNNNNGTG 1 cut(s) 842
PaeR7I CTCGAG 1 cut(s) 609
PagI TCATGA 1 cut(s) 550
PciI ACATGT 1 cut(s) 1629
PciSI GCTCTTC 1 cut(s) 552
PfeI GAWTC 8 cut(s) 125, 281, 554, 1642, 1670, 1775, 2081, 2451
PfoI TCCNGGA 1 cut(s) 2401
PleI GAGTC 2 cut(s) 371, 1125
PmaCI CACGTG 2 cut(s) 1413, 2027
PmlI CACGTG 2 cut(s) 1413, 2027
PpsI GAGTC 2 cut(s) 371, 1125
Ppu21I YACGTR 2 cut(s) 1413, 2027
PpuMI RGGWCCY 1 cut(s) 729
PscI ACATGT 1 cut(s) 1629
PshBI ATTAAT 1 cut(s) 165
Psp124BI GAGCTC 2 cut(s) 310, 2265
Psp5II RGGWCCY 1 cut(s) 729
Psp6I CCWGG 3 cut(s) 209, 803, 2401
PspCI CACGTG 2 cut(s) 1413, 2027
PspGI CCWGG 3 cut(s) 209, 803, 2401
PspPI GGNCC 3 cut(s) 413, 729, 976
PspPPI RGGWCCY 1 cut(s) 729
PspXI VCTCGAGB 1 cut(s) 609
PsrI GAACNNNNNNTAC 4 cut(s) 705, 737, 859, 891
PstI CTGCAG 5 cut(s) 757, 910, 1366, 1726, 2157
PstNI CAGNNNCTG 2 cut(s) 605, 752
PsuI RGATCY 4 cut(s) 82, 809, 1300, 1612
PvuII CAGCTG 1 cut(s) 251
RsaI GTAC 6 cut(s) 994, 1248, 1373, 1468, 1659, 1689
RsaNI GTAC 6 cut(s) 993, 1247, 1372, 1467, 1658, 1688
RseI CAYNNNNRTG 1 cut(s) 842
SacI GAGCTC 2 cut(s) 310, 2265
SapI GCTCTTC 1 cut(s) 552
SaqAI TTAA 4 cut(s) 165, 1511, 1697, 2217
Sau3AI GATC 8 cut(s) 82, 400, 809, 1300, 1306, 1612, 1792, 2104
Sau96I GGNCC 3 cut(s) 413, 729, 976
ScaI AGTACT 1 cut(s) 1373
SchI GAGTC 2 cut(s) 371, 1125
ScrFI CCNGG 3 cut(s) 211, 805, 2403
SduI GDGCHC 5 cut(s) 76, 310, 660, 1637, 2265
SfaNI GCATC 6 cut(s) 256, 532, 1016, 1304, 2157, 2306
SfcI CTRYAG 7 cut(s) 456, 753, 906, 1362, 1395, 1722, 2153
Sfr274I CTCGAG 1 cut(s) 609
SinI GGWCC 1 cut(s) 729
SlaI CTCGAG 1 cut(s) 609
SmiMI CAYNNNNRTG 1 cut(s) 842
SmlI CTYRAG 1 cut(s) 609
SmoI CTYRAG 1 cut(s) 609
SsiI CCGC 9 cut(s) 579, 681, 692, 1238, 1338, 1383, 1474, 2143, 2379
SspI AATATT 2 cut(s) 163, 1037
SspMI CTAG 7 cut(s) 134, 270, 725, 1023, 1161, 1595, 1889
SstI GAGCTC 2 cut(s) 310, 2265
StyD4I CCNGG 3 cut(s) 209, 803, 2401
StyI CCWWGG 1 cut(s) 1931
TaaI ACNGT 3 cut(s) 772, 1849, 1943
TaiI ACGT 3 cut(s) 719, 1415, 2029
TaqI TCGA 5 cut(s) 610, 887, 1129, 1899, 2134
TatI WGTACW 2 cut(s) 1371, 1657
TauI GCSGC 2 cut(s) 581, 1385
TfiI GAWTC 8 cut(s) 125, 281, 554, 1642, 1670, 1775, 2081, 2451
Tru1I TTAA 4 cut(s) 165, 1511, 1697, 2217
Tru9I TTAA 4 cut(s) 165, 1511, 1697, 2217
TscAI CASTG 7 cut(s) 356, 375, 610, 775, 928, 1852, 2313
TseFI GTSAC 2 cut(s) 601, 2027
Tsp45I GTSAC 2 cut(s) 601, 2027
TspDTI ATGAA 5 cut(s) 188, 539, 1190, 1605, 1623
TspGWI ACGGA 2 cut(s) 1474, 1840
TspRI CASTG 7 cut(s) 356, 375, 610, 775, 928, 1852, 2313
VpaK11BI GGWCC 1 cut(s) 729
VspI ATTAAT 1 cut(s) 165
XapI RAATTY 5 cut(s) 31, 584, 1165, 1183, 1345
XbaI TCTAGA 1 cut(s) 1160
XceI RCATGY 2 cut(s) 47, 1633
XcmI CCANNNNNNNNNTGG 1 cut(s) 986
XhoI CTCGAG 1 cut(s) 609
XmiI GTMKAC 1 cut(s) 340
XspI CTAG 7 cut(s) 134, 270, 725, 1023, 1161, 1595, 1889
ZrmI AGTACT 1 cut(s) 1373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.