SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD H box
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom13g01030 |
| rosa_multiflora | Rmu_sc0003226.1_g000058 |
| rosa_samantha | Rh1DG025100 Rh2CG263000 Rh3BG172500 Rh3CG163800 Rh4CG452700 Rh6CG178900 Rh6DG170600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 94 |
| AciI | CCGC | 1 cut(s) | 110 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 106 |
| AgsI | TTSAA | 1 cut(s) | 67 |
| Alw21I | GWGCWC | 1 cut(s) | 54 |
| Alw26I | GTCTC | 1 cut(s) | 151 |
| ApeKI | GCWGC | 1 cut(s) | 9 |
| AspLEI | GCGC | 2 cut(s) | 9, 96 |
| AsuII | TTCGAA | 1 cut(s) | 24 |
| Bbv12I | GWGCWC | 1 cut(s) | 54 |
| BbvI | GCAGC | 1 cut(s) | 21 |
| BcoDI | GTCTC | 1 cut(s) | 151 |
| BisI | GCNGC | 2 cut(s) | 10, 111 |
| BlsI | GCNGC | 2 cut(s) | 11, 112 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 38, 70, 41, 73 |
| Bpu14I | TTCGAA | 1 cut(s) | 24 |
| BpuEI | CTTGAG | 1 cut(s) | 68 |
| BsaWI | WCCGGW | 1 cut(s) | 132 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 44, 74 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 106 |
| Bse118I | RCCGGY | 1 cut(s) | 106 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseRI | GAGGAG | 3 cut(s) | 46, 49, 62 |
| BseXI | GCAGC | 1 cut(s) | 21 |
| Bsh1236I | CGCG | 1 cut(s) | 94 |
| BsiHKAI | GWGCWC | 1 cut(s) | 54 |
| BsiSI | CCGG | 2 cut(s) | 107, 133 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BsmAI | GTCTC | 1 cut(s) | 151 |
| Bsp119I | TTCGAA | 1 cut(s) | 24 |
| Bsp1286I | GDGCHC | 1 cut(s) | 54 |
| BspACI | CCGC | 1 cut(s) | 110 |
| BspFNI | CGCG | 1 cut(s) | 94 |
| BspT104I | TTCGAA | 1 cut(s) | 24 |
| BsrFI | RCCGGY | 1 cut(s) | 106 |
| BssAI | RCCGGY | 1 cut(s) | 106 |
| BstBI | TTCGAA | 1 cut(s) | 24 |
| BstFNI | CGCG | 1 cut(s) | 94 |
| BstHHI | GCGC | 2 cut(s) | 9, 96 |
| BstMAI | GTCTC | 1 cut(s) | 151 |
| BstUI | CGCG | 1 cut(s) | 94 |
| BstV1I | GCAGC | 1 cut(s) | 21 |
| CfoI | GCGC | 2 cut(s) | 9, 96 |
| Cfr10I | RCCGGY | 1 cut(s) | 106 |
| CseI | GACGC | 1 cut(s) | 67 |
| CviJI | RGCY | 2 cut(s) | 12, 70 |
| CviKI_1 | RGCY | 2 cut(s) | 12, 70 |
| Fnu4HI | GCNGC | 2 cut(s) | 10, 111 |
| Fsp4HI | GCNGC | 2 cut(s) | 10, 111 |
| GlaI | GCGC | 2 cut(s) | 8, 95 |
| GluI | GCNGC | 2 cut(s) | 10, 111 |
| HapII | CCGG | 2 cut(s) | 107, 133 |
| HgaI | GACGC | 1 cut(s) | 67 |
| HhaI | GCGC | 2 cut(s) | 9, 96 |
| Hin6I | GCGC | 2 cut(s) | 7, 94 |
| HinP1I | GCGC | 2 cut(s) | 7, 94 |
| HinfI | GANTC | 3 cut(s) | 119, 144, 158 |
| HpaII | CCGG | 2 cut(s) | 107, 133 |
| Hpy188I | TCNGA | 3 cut(s) | 34, 151, 163 |
| Hpy188III | TCNNGA | 1 cut(s) | 85 |
| Hpy99I | CGWCG | 1 cut(s) | 38 |
| HpyAV | CCTTC | 1 cut(s) | 73 |
| HspAI | GCGC | 2 cut(s) | 7, 94 |
| LmnI | GCTCC | 1 cut(s) | 49 |
| LpnPI | CCDG | 3 cut(s) | 88, 120, 146 |
| Lsp1109I | GCAGC | 1 cut(s) | 21 |
| MhlI | GDGCHC | 1 cut(s) | 54 |
| MlyI | GAGTC | 3 cut(s) | 128, 152, 153 |
| MmeI | TCCRAC | 1 cut(s) | 57 |
| MnlI | CCTC | 6 cut(s) | 23, 40, 67, 70, 82, 92 |
| MspI | CCGG | 2 cut(s) | 107, 133 |
| MvnI | CGCG | 1 cut(s) | 94 |
| NspV | TTCGAA | 1 cut(s) | 24 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 21, 30, 98 |
| PkrI | GCNGC | 2 cut(s) | 11, 112 |
| PleI | GAGTC | 3 cut(s) | 127, 152, 152 |
| PpsI | GAGTC | 3 cut(s) | 127, 152, 152 |
| SatI | GCNGC | 2 cut(s) | 10, 111 |
| SchI | GAGTC | 3 cut(s) | 128, 152, 153 |
| SduI | GDGCHC | 1 cut(s) | 54 |
| SfuI | TTCGAA | 1 cut(s) | 24 |
| SgrAI | CRCCGGYG | 1 cut(s) | 106 |
| SmlI | CTYRAG | 1 cut(s) | 83 |
| SmoI | CTYRAG | 1 cut(s) | 83 |
| SsiI | CCGC | 1 cut(s) | 110 |
| TaqI | TCGA | 3 cut(s) | 15, 24, 117 |
| TauI | GCSGC | 1 cut(s) | 113 |
| TseI | GCWGC | 1 cut(s) | 9 |
| TspDTI | ATGAA | 1 cut(s) | 17 |