Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0016622

Physical Location & Seq

Genomic Coordinates Reverse (-)

526784 .. 528979

Gene Structure 2196 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG007600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGGGACACAAATGGGCTTCAGGGTTTTTACCCTTTAGTGATCTTAAGTTAGCTGCACAGCTACTGGTTTTGTTAGTGCTTCTGTGCTCAAGTCTTTCTCAAAGTCTTGATCTTGATCCGGAAGATAAAGCTTCCATGTTGAAATTCAGGTCAGGGGTTCAAGACCCTAGCCAGAGCTTGTCAAGCTGGGCTGGGTCTAGTTGTGCCAACTGGACTGGAATCACCTGCCAGAACCAGACTGGTAGAGTGGTTTCGATTGACTTGACCAATATGAACTTGTCAGGCCAAATTGACCCGAGTTTGTGCAAGCTTCCATTTCTTCAAGATTTGGTTTTGTCCCAGAACAACTTTAGTTGCCCAATACCAGTATGTTTAGGCAGTCTGAGCTTTCTCAGGACTCTACATCTTGGTCACAATAGGTTTCGGGGTGTGGTGCCTGATACATTCATGAGGCTCGAGCAGTTGAAAGAACTTGTTTTGAATGGTAATAATGATTTGGGAGGTGTTATTCCTTGGTGGGTTGGTAATTTCTCAGCACAGTTGGAAAAGCTAGATGTGGGTTTTAATTCATTTCATGGGGAGATTCCTCAAAGCTTGTTGTACTTGAAATCTCTCAAGTATTTGGATCTTGGGAACAATAATTTATCTGGCAGTCTTAGTGATTTTCACCAGTCTTTGGTGTTTCTCAATCTTGGATCGAACCAGTTTTCGGGTACTTTACCTTGTTTCTCTACTTGTGAGCAGTCTCTTAGAGTTTTGAATCTGGCTAACAATTCTGTGGTCGGAGGCATACCTACATGTATTGCTTCACTTCAAGCTTTGCAACATCTGAACCTTTCATCCAATCAATTGACTTACGAGATGTCTCCAAGACTTGTGTTTTCAGAGAAGCTTCTTCTCTTGGACTTGAGTAACAATGAGTTGTCTGGTCCTCTTCCGAGCAAGGTTGCAGAGACAACGGATAAATCCGGGCTTGTTCTTCTTGATTTGTCTCACAATCGTTTCTCTGGTGAAATCCCATTGAAGATTACAGAACTGAAGAGCCTGCAGGCACTGTTTCTATCGCACAATCTTCTTGTTGGGGAAATTCCCGCGAGGATTGGCAACCTAACCTATCTACAAGTGATTGATCTCTCACACAACTCATTATCAGGTTCAATTCCATTAAACATCGTTGGTTGTTTTCAGCTGCTTGCATTGATACTCAATAACAACAATCTTTCTGGTGAAATTCAACCTGAACTTGATGCATTGGATAGCTTGAAGATACTGGATATTAGCAACAACAAGATATCTGGGGAAATCCCACTTACTTTGGCTGGCTGTAAATCACTCGAGATTGTAGATTTCAGCTCCAACAATCTCTCCGGAACTTTGAGTGATGCAATAACCAAATGGTCAAATCTCAGGTATCTGTCCCTTGCTCGTAATGAATTTGCTGGAAATCTGCCTAGTTGGCTCTTTACTTTTGAAGCGATCAGAATGATGGATTTCTCAGGAAACAAATTTTCTGGCTTCATACCAGAGGGTAATTTTAACATGAGCATAAATTTTAACAATGGAGAGGTTGATAGAATGCAGAGAGATCCATTTGTTTCAATGCAGAATGTGGATACAAAAGTGTTGATTGTTGTCACTGGTAGTATTGAATTAAGCTTCAGTTACATACTATCTTCAATGGTTGGAATCGATTTCTCTAACAATGTACTCATTGGGGAGGTTCCAGTGGGGCTGTTTGGATTACATGGTTTGGAATACTTGAATCTTTCGCACAATTTTCTTCATGGTGGGGTTCCGGATTTAGAAAAGATGTGGAGTTTAAAGGCCTTAGATTTGTCCCATAATGCTTTATCAGGTCACATTCCAGGAAACATTTCCAGCCTTCCGGACCTGACTCGTTTGGATTTGTCATATAACTCTTTTTCTGGGTTTGTGACCAAGAAGCAAGGATATCACAGGTTTCCGGGAGCATTTGCTGGAAATCCAAATTTGTGTTTAGAGTCCCCTGATGGAGGGTGTGATCCGGCAAGCCTTCCGGTGGTGCCCGGGAAGGCATTTGAAGGGGAAGAAGAGGTTGAGGGGCGGATTTCTGTTTGGGTTTTTTGTGTAAGTGCATTCCTCAGTTTCTACTTTGGGGGCTTGGCCCTTTTTTGCTCCCCTCGAGCTCGGAAATACATTCTGCATACAAAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0007275 GO:0008150 GO:0009791 GO:0009888 GO:0009908 GO:0010073 GO:0010075 GO:0012505 GO:0016020 GO:0022414 GO:0031984 GO:0032501 GO:0032502 GO:0040008 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0048367 GO:0048507 GO:0048509 GO:0048608 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0061458 GO:0065007 GO:0071944 GO:0090567 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

731

Amino Acids

79.83

Weight (kDa)

5.41

Isoelectric Point (pI)

31.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	40 - 76	1.8e-08	Leucine rich repeat N-terminal domain
LRR_14	PF23598	99 - 279	4.2e-09	Leucine-rich repeat region
LRR_8	PF13855	127 - 164	4.6e-06	Leucine rich repeat
LRR_14	PF23598	328 - 486	4.6e-08	Leucine-rich repeat region
LRR_4	PF12799	420 - 461	1.9e-06	Leucine Rich repeats (2 copies)
LRR_8	PF13855	604 - 640	9.3e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016622)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65380
fragaria_vesca	FvH4_6g00680
prunus_persica	Prupe.6G359800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0448121
rosa_laevigata	RLG00000025945 RLG00000026021
rosa_multiflora	Rmu_sc0005969.1_g000028
rosa_roxburghii	Rroxscaffold_6G00426250
rosa_rugosa	Rorug02G0608300
rosa_samantha	Rh3BG007600 Rh3CG007600 Rh3DG008100 Rh5DG014100
rosa_wichuraiana	Rw3G000630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	233
Acc36I	ACCTGC	1 cut(s)	233
AccB1I	GGYRCC	2 cut(s)	433, 2041
AccB7I	CCANNNNNTGG	1 cut(s)	676
AccII	CGCG	1 cut(s)	1094
AccIII	TCCGGA	4 cut(s)	118, 1367, 1795, 1885
AciI	CCGC	2 cut(s)	1092, 2083
AclWI	GGATC	5 cut(s)	110, 633, 703, 1580, 2015
AcsI	RAATTY	7 cut(s)	143, 1086, 1230, 1433, 1505, 1549, 1987
AcuI	CTGAAG	2 cut(s)	1058, 1642
AfaI	GTAC	3 cut(s)	602, 715, 1707
AfiI	CCNNNNNNNGG	4 cut(s)	676, 709, 2012, 2038
AflII	CTTAAG	1 cut(s)	44
AflIII	ACRYGT	1 cut(s)	797
AjnI	CCWGG	1 cut(s)	1864
AloI	GAACNNNNNNTCC	2 cut(s)	824, 856
Alw21I	GWGCWC	2 cut(s)	89, 2167
Alw26I	GTCTC	4 cut(s)	750, 870, 947, 996
AlwI	GGATC	5 cut(s)	110, 633, 703, 1580, 2015
AlwNI	CAGNNNCTG	2 cut(s)	64, 1054
Ama87I	CYCGRG	5 cut(s)	295, 455, 1334, 2045, 2160
Aor13HI	TCCGGA	4 cut(s)	118, 1367, 1795, 1885
AoxI	GGCC	3 cut(s)	283, 1824, 2142
ApeKI	GCWGC	2 cut(s)	53, 1189
ApoI	RAATTY	7 cut(s)	143, 1086, 1230, 1433, 1505, 1549, 1987
Asp700I	GAANNNNTTC	1 cut(s)	1873
AspS9I	GGNCC	3 cut(s)	929, 1888, 2143
AsuC2I	CCSGG	4 cut(s)	970, 1965, 2046, 2047
AsuHPI	GGTGA	4 cut(s)	214, 659, 1022, 1238
AvaI	CYCGRG	5 cut(s)	295, 455, 1334, 2045, 2160
AvaII	GGWCC	2 cut(s)	929, 1888
BaeGI	GKGCMC	1 cut(s)	2046
BaeI	ACNNNNGTAYC	2 cut(s)	1605, 1638
BanI	GGYRCC	2 cut(s)	433, 2041
BanII	GRGCYC	1 cut(s)	2167
Bbv12I	GWGCWC	2 cut(s)	89, 2167
BbvI	GCAGC	2 cut(s)	40, 1176
BccI	CCATC	2 cut(s)	1480, 2003
BciT130I	CCWGG	1 cut(s)	1866
BciVI	GTATCC	1 cut(s)	1606
BcnI	CCSGG	4 cut(s)	970, 1965, 2046, 2047
BcoDI	GTCTC	4 cut(s)	750, 870, 947, 996
BfaI	CTAG	4 cut(s)	168, 198, 551, 1452
BfmI	CTRYAG	1 cut(s)	1046
BfrI	CTTAAG	1 cut(s)	44
BfuAI	ACCTGC	1 cut(s)	233
BfuI	GTATCC	1 cut(s)	1606
BglI	GCCNNNNNGGC	1 cut(s)	1456
BisI	GCNGC	2 cut(s)	54, 1190
BlsI	GCNGC	2 cut(s)	55, 1191
Bme1390I	CCNGG	5 cut(s)	970, 1866, 1965, 2046, 2047
Bme18I	GGWCC	2 cut(s)	929, 1888
BmeT110I	CYCGRG	5 cut(s)	295, 455, 1334, 2045, 2160
BmgT120I	GGNCC	3 cut(s)	929, 1888, 2143
BmiI	GGNNCC	4 cut(s)	435, 1722, 1794, 2043
BmrFI	CCNGG	5 cut(s)	970, 1866, 1965, 2046, 2047
BmsI	GCATC	2 cut(s)	1237, 1372
BpuEI	CTTGAG	3 cut(s)	73, 599, 928
BpuMI	CCSGG	4 cut(s)	970, 1965, 2046, 2047
Bsa29I	ATCGAT	1 cut(s)	1689
BsaBI	GATNNNNATC	1 cut(s)	114
BsaJI	CCNNGG	2 cut(s)	512, 2045
BsaWI	WCCGGW	5 cut(s)	118, 1367, 1795, 1885, 2035
BsaXI	ACNNNNNCTCC	2 cut(s)	1349, 1379
Bsc4I	CCNNNNNNNGG	4 cut(s)	676, 709, 2012, 2038
Bse8I	GATNNNNATC	1 cut(s)	114
BseAI	TCCGGA	4 cut(s)	118, 1367, 1795, 1885
BseBI	CCWGG	1 cut(s)	1866
BseCI	ATCGAT	1 cut(s)	1689
BseDI	CCNNGG	2 cut(s)	512, 2045
BseGI	GGATG	1 cut(s)	839
BseJI	GATNNNNATC	1 cut(s)	114
BseLI	CCNNNNNNNGG	4 cut(s)	676, 709, 2012, 2038
BseMII	CTCAG	6 cut(s)	374, 406, 546, 1420, 1509, 2134
BseSI	GKGCMC	1 cut(s)	2046
BseXI	GCAGC	2 cut(s)	40, 1176
BseYI	CCCAGC	2 cut(s)	186, 191
BsgI	GTGCAG	1 cut(s)	39
Bsh1236I	CGCG	1 cut(s)	1094
BshFI	GGCC	3 cut(s)	285, 1826, 2144
BshNI	GGYRCC	2 cut(s)	433, 2041
BshVI	ATCGAT	1 cut(s)	1689
BsiHKAI	GWGCWC	2 cut(s)	89, 2167
BsiHKCI	CYCGRG	5 cut(s)	295, 455, 1334, 2045, 2160
BsiSI	CCGG	9 cut(s)	119, 969, 1368, 1796, 1886, 1964, 2024, 2036, 2046
BslFI	GGGAC	5 cut(s)	18, 322, 1402, 1822, 1987
BslI	CCNNNNNNNGG	4 cut(s)	676, 709, 2012, 2038
BsmAI	GTCTC	4 cut(s)	750, 870, 947, 996
BsmFI	GGGAC	5 cut(s)	18, 322, 1402, 1822, 1987
BsmI	GAATGC	2 cut(s)	1581, 2114
BsnI	GGCC	3 cut(s)	285, 1826, 2144
BsoBI	CYCGRG	5 cut(s)	295, 455, 1334, 2045, 2160
Bsp1286I	GDGCHC	3 cut(s)	89, 2046, 2167
Bsp13I	TCCGGA	4 cut(s)	118, 1367, 1795, 1885
Bsp143I	GATC	9 cut(s)	40, 109, 115, 625, 695, 1129, 1476, 1585, 2020
BspACI	CCGC	2 cut(s)	1092, 2083
BspANI	GGCC	3 cut(s)	285, 1826, 2144
BspCNI	CTCAG	6 cut(s)	375, 405, 545, 1419, 1508, 2133
BspDI	ATCGAT	1 cut(s)	1689
BspEI	TCCGGA	4 cut(s)	118, 1367, 1795, 1885
BspFNI	CGCG	1 cut(s)	1094
BspHI	TCATGA	1 cut(s)	447
BspLI	GGNNCC	4 cut(s)	435, 1722, 1794, 2043
BspMAI	CTGCAG	1 cut(s)	1050
BspMI	ACCTGC	1 cut(s)	233
BspPI	GGATC	5 cut(s)	110, 633, 703, 1580, 2015
BspQI	GCTCTTC	1 cut(s)	1034
BspT107I	GGYRCC	2 cut(s)	433, 2041
BspTI	CTTAAG	1 cut(s)	44
BssECI	CCNNGG	2 cut(s)	512, 2045
BssMI	GATC	9 cut(s)	40, 109, 115, 625, 695, 1129, 1476, 1585, 2020
BssT1I	CCWWGG	1 cut(s)	512
Bst2UI	CCWGG	1 cut(s)	1866
Bst4CI	ACNGT	2 cut(s)	540, 1056
Bst6I	CTCTTC	3 cut(s)	939, 1034, 2064
BstAFI	CTTAAG	1 cut(s)	44
BstC8I	GCNNGC	6 cut(s)	308, 1046, 1050, 1194, 1321, 2029
BstENI	CCTNNNNNAGG	1 cut(s)	2010
BstF5I	GGATG	1 cut(s)	839
BstFNI	CGCG	1 cut(s)	1094
BstKTI	GATC	9 cut(s)	43, 112, 118, 628, 698, 1132, 1479, 1588, 2023
BstMAI	GTCTC	4 cut(s)	750, 870, 947, 996
BstMBI	GATC	9 cut(s)	40, 109, 115, 625, 695, 1129, 1476, 1585, 2020
BstMWI	GCNNNNNNNGC	3 cut(s)	183, 384, 1456
BstNI	CCWGG	1 cut(s)	1866
BstNSI	RCATGY	1 cut(s)	801
BstSCI	CCNGG	5 cut(s)	968, 1864, 1963, 2044, 2045
BstSFI	CTRYAG	1 cut(s)	1046
BstSLI	GKGCMC	1 cut(s)	2046
BstUI	CGCG	1 cut(s)	1094
BstV1I	GCAGC	2 cut(s)	40, 1176
BstX2I	RGATCY	2 cut(s)	625, 1585
BstYI	RGATCY	2 cut(s)	625, 1585
Bsu15I	ATCGAT	1 cut(s)	1689
BsuI	GTATCC	1 cut(s)	1606
BsuRI	GGCC	3 cut(s)	285, 1826, 2144
BsuTUI	ATCGAT	1 cut(s)	1689
BtsCI	GGATG	1 cut(s)	839
BtsIMutI	CAGTG	3 cut(s)	1052, 1635, 1731
BveI	ACCTGC	1 cut(s)	233
Cac8I	GCNNGC	6 cut(s)	308, 1046, 1050, 1194, 1321, 2029
CaiI	CAGNNNCTG	2 cut(s)	64, 1054
CciI	TCATGA	1 cut(s)	447
Cfr13I	GGNCC	3 cut(s)	929, 1888, 2143
Cfr9I	CCCGGG	1 cut(s)	2045
ClaI	ATCGAT	1 cut(s)	1689
Csp6I	GTAC	3 cut(s)	601, 714, 1706
CspCI	CAANNNNNGTGG	2 cut(s)	1296, 1331
CviAII	CATG	7 cut(s)	136, 448, 575, 798, 1540, 1745, 1784
CviQI	GTAC	3 cut(s)	601, 714, 1706
DpnI	GATC	9 cut(s)	42, 111, 117, 627, 697, 1131, 1478, 1587, 2022
DpnII	GATC	9 cut(s)	40, 109, 115, 625, 695, 1129, 1476, 1585, 2020
DraI	TTTAAA	1 cut(s)	1821
Eam1104I	CTCTTC	3 cut(s)	939, 1034, 2064
EarI	CTCTTC	3 cut(s)	939, 1034, 2064
EciI	GGCGGA	1 cut(s)	2098
Ecl136II	GAGCTC	1 cut(s)	2165
Eco130I	CCWWGG	1 cut(s)	512
Eco147I	AGGCCT	1 cut(s)	1826
Eco24I	GRGCYC	1 cut(s)	2167
Eco32I	GATATC	2 cut(s)	1293, 1952
Eco47I	GGWCC	2 cut(s)	929, 1888
Eco53kI	GAGCTC	1 cut(s)	2165
Eco57I	CTGAAG	2 cut(s)	1058, 1642
Eco88I	CYCGRG	5 cut(s)	295, 455, 1334, 2045, 2160
EcoICRI	GAGCTC	1 cut(s)	2165
EcoNI	CCTNNNNNAGG	1 cut(s)	2010
EcoRII	CCWGG	1 cut(s)	1864
EcoRV	GATATC	2 cut(s)	1293, 1952
EcoT14I	CCWWGG	1 cut(s)	512
EcoT22I	ATGCAT	1 cut(s)	1252
EcoT38I	GRGCYC	1 cut(s)	2167
ErhI	CCWWGG	1 cut(s)	512
FaeI	CATG	7 cut(s)	139, 451, 578, 801, 1543, 1748, 1787
FaqI	GGGAC	5 cut(s)	18, 322, 1402, 1822, 1987
FatI	CATG	7 cut(s)	135, 447, 574, 797, 1539, 1744, 1783
FauI	CCCGC	1 cut(s)	1099
Fnu4HI	GCNGC	2 cut(s)	54, 1190
FokI	GGATG	1 cut(s)	826
FriOI	GRGCYC	1 cut(s)	2167
Fsp4HI	GCNGC	2 cut(s)	54, 1190
FspBI	CTAG	4 cut(s)	168, 198, 551, 1452
GluI	GCNGC	2 cut(s)	54, 1190
GsaI	CCCAGC	2 cut(s)	190, 195
HaeIII	GGCC	3 cut(s)	285, 1826, 2144
HapII	CCGG	9 cut(s)	119, 969, 1368, 1796, 1886, 1964, 2024, 2036, 2046
Hin1II	CATG	7 cut(s)	139, 451, 578, 801, 1543, 1748, 1787
HindIII	AAGCTT	7 cut(s)	129, 308, 592, 816, 890, 1654, 2190
HinfI	GANTC	8 cut(s)	219, 397, 583, 760, 1686, 1762, 1894, 2000
HpaII	CCGG	9 cut(s)	119, 969, 1368, 1796, 1886, 1964, 2024, 2036, 2046
HphI	GGTGA	4 cut(s)	214, 659, 1022, 1238
Hpy188I	TCNGA	7 cut(s)	384, 785, 831, 886, 939, 1481, 2169
HpyAV	CCTTC	4 cut(s)	1892, 2042, 2044, 2054
HpyCH4III	ACNGT	2 cut(s)	540, 1056
HpyF10VI	GCNNNNNNNGC	3 cut(s)	183, 384, 1456
Hsp92II	CATG	7 cut(s)	139, 451, 578, 801, 1543, 1748, 1787
Kpn2I	TCCGGA	4 cut(s)	118, 1367, 1795, 1885
Kzo9I	GATC	9 cut(s)	40, 109, 115, 625, 695, 1129, 1476, 1585, 2020
LguI	GCTCTTC	1 cut(s)	1034
LmnI	GCTCC	3 cut(s)	1358, 1967, 2159
Lsp1109I	GCAGC	2 cut(s)	40, 1176
LweI	GCATC	2 cut(s)	1237, 1372
MaeI	CTAG	4 cut(s)	168, 198, 551, 1452
MaeIII	GTNAC	6 cut(s)	410, 911, 1633, 1661, 1856, 1933
MalI	GATC	9 cut(s)	42, 111, 117, 627, 697, 1131, 1478, 1587, 2022
MboI	GATC	9 cut(s)	40, 109, 115, 625, 695, 1129, 1476, 1585, 2020
MfeI	CAATTG	1 cut(s)	848
MflI	RGATCY	2 cut(s)	625, 1585
MhlI	GDGCHC	3 cut(s)	89, 2046, 2167
MlyI	GAGTC	3 cut(s)	391, 1888, 2009
MmeI	TCCRAC	4 cut(s)	522, 763, 1380, 1663
Mph1103I	ATGCAT	1 cut(s)	1252
MroI	TCCGGA	4 cut(s)	118, 1367, 1795, 1885
MroXI	GAANNNNTTC	1 cut(s)	1873
MseI	TTAA	7 cut(s)	45, 564, 1166, 1536, 1554, 1652, 1820
MspA1I	CMGCKG	1 cut(s)	1189
MspCI	CTTAAG	1 cut(s)	44
MspI	CCGG	9 cut(s)	119, 969, 1368, 1796, 1886, 1964, 2024, 2036, 2046
MspR9I	CCNGG	5 cut(s)	970, 1866, 1965, 2046, 2047
MunI	CAATTG	1 cut(s)	848
Mva1269I	GAATGC	2 cut(s)	1581, 2114
MvaI	CCWGG	1 cut(s)	1866
MvnI	CGCG	1 cut(s)	1094
MwoI	GCNNNNNNNGC	3 cut(s)	183, 384, 1456
NciI	CCSGG	4 cut(s)	970, 1965, 2046, 2047
NdeII	GATC	9 cut(s)	40, 109, 115, 625, 695, 1129, 1476, 1585, 2020
NlaIII	CATG	7 cut(s)	139, 451, 578, 801, 1543, 1748, 1787
NlaIV	GGNNCC	4 cut(s)	435, 1722, 1794, 2043
NmuCI	GTSAC	4 cut(s)	410, 1633, 1856, 1933
NsiI	ATGCAT	1 cut(s)	1252
NspI	RCATGY	1 cut(s)	801
PaeR7I	CTCGAG	3 cut(s)	455, 1334, 2160
PagI	TCATGA	1 cut(s)	447
PaqCI	CACCTGC	1 cut(s)	233
PceI	AGGCCT	1 cut(s)	1826
PciI	ACATGT	1 cut(s)	797
PciSI	GCTCTTC	1 cut(s)	1034
PctI	GAATGC	2 cut(s)	1581, 2114
PdmI	GAANNNNTTC	1 cut(s)	1873
PfeI	GAWTC	5 cut(s)	219, 583, 760, 1686, 1762
PflMI	CCANNNNNTGG	1 cut(s)	676
PfoI	TCCNGGA	2 cut(s)	1864, 1963
PkrI	GCNGC	2 cut(s)	55, 1191
PleI	GAGTC	3 cut(s)	391, 1888, 2008
PpsI	GAGTC	3 cut(s)	391, 1888, 2008
PscI	ACATGT	1 cut(s)	797
Psp124BI	GAGCTC	1 cut(s)	2167
Psp6I	CCWGG	1 cut(s)	1864
PspFI	CCCAGC	2 cut(s)	186, 191
PspGI	CCWGG	1 cut(s)	1864
PspN4I	GGNNCC	4 cut(s)	435, 1722, 1794, 2043
PspPI	GGNCC	3 cut(s)	929, 1888, 2143
PspXI	VCTCGAGB	2 cut(s)	455, 2160
PstI	CTGCAG	1 cut(s)	1050
PstNI	CAGNNNCTG	2 cut(s)	64, 1054
PsuI	RGATCY	2 cut(s)	625, 1585
PvuII	CAGCTG	1 cut(s)	1189
RsaI	GTAC	3 cut(s)	602, 715, 1707
RsaNI	GTAC	3 cut(s)	601, 714, 1706
SacI	GAGCTC	1 cut(s)	2167
SapI	GCTCTTC	1 cut(s)	1034
SaqAI	TTAA	7 cut(s)	45, 564, 1166, 1536, 1554, 1652, 1820
SatI	GCNGC	2 cut(s)	54, 1190
Sau3AI	GATC	9 cut(s)	40, 109, 115, 625, 695, 1129, 1476, 1585, 2020
Sau96I	GGNCC	3 cut(s)	929, 1888, 2143
SbfI	CCTGCAGG	1 cut(s)	1050
SchI	GAGTC	3 cut(s)	391, 1888, 2009
ScrFI	CCNGG	5 cut(s)	970, 1866, 1965, 2046, 2047
SdaI	CCTGCAGG	1 cut(s)	1050
SduI	GDGCHC	3 cut(s)	89, 2046, 2167
SfaNI	GCATC	2 cut(s)	1237, 1372
SfcI	CTRYAG	1 cut(s)	1046
Sfr274I	CTCGAG	3 cut(s)	455, 1334, 2160
SinI	GGWCC	2 cut(s)	929, 1888
SlaI	CTCGAG	3 cut(s)	455, 1334, 2160
SmaI	CCCGGG	1 cut(s)	2047
SmlI	CTYRAG	7 cut(s)	44, 88, 455, 614, 907, 1334, 2160
SmoI	CTYRAG	7 cut(s)	44, 88, 455, 614, 907, 1334, 2160
Sse8387I	CCTGCAGG	1 cut(s)	1050
SseBI	AGGCCT	1 cut(s)	1826
SsiI	CCGC	2 cut(s)	1092, 2083
SspMI	CTAG	4 cut(s)	168, 198, 551, 1452
SstI	GAGCTC	1 cut(s)	2167
StuI	AGGCCT	1 cut(s)	1826
StyD4I	CCNGG	5 cut(s)	968, 1864, 1963, 2044, 2045
StyI	CCWWGG	1 cut(s)	512
TaaI	ACNGT	2 cut(s)	540, 1056
TaqI	TCGA	6 cut(s)	254, 456, 698, 1335, 1689, 2161
TatI	WGTACW	2 cut(s)	600, 1705
TfiI	GAWTC	5 cut(s)	219, 583, 760, 1686, 1762
Tru1I	TTAA	7 cut(s)	45, 564, 1166, 1536, 1554, 1652, 1820
Tru9I	TTAA	7 cut(s)	45, 564, 1166, 1536, 1554, 1652, 1820
TscAI	CASTG	3 cut(s)	1059, 1642, 1731
TseFI	GTSAC	4 cut(s)	410, 1633, 1856, 1933
TseI	GCWGC	2 cut(s)	53, 1189
Tsp45I	GTSAC	4 cut(s)	410, 1633, 1856, 1933
TspDTI	ATGAA	8 cut(s)	287, 436, 558, 563, 828, 1446, 1507, 1772
TspGWI	ACGGA	1 cut(s)	974
TspMI	CCCGGG	1 cut(s)	2045
TspRI	CASTG	3 cut(s)	1059, 1642, 1731
Van91I	CCANNNNNTGG	1 cut(s)	676
Vha464I	CTTAAG	1 cut(s)	44
VpaK11BI	GGWCC	2 cut(s)	929, 1888
XagI	CCTNNNNNAGG	1 cut(s)	2010
XapI	RAATTY	7 cut(s)	143, 1086, 1230, 1433, 1505, 1549, 1987
XceI	RCATGY	1 cut(s)	801
XcmI	CCANNNNNNNNNTGG	1 cut(s)	236
XhoI	CTCGAG	3 cut(s)	455, 1334, 2160
XmaI	CCCGGG	1 cut(s)	2045
XmnI	GAANNNNTTC	1 cut(s)	1873
XspI	CTAG	4 cut(s)	168, 198, 551, 1452
Zsp2I	ATGCAT	1 cut(s)	1252

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.