Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0016622

Physical Location & Seq

Genomic Coordinates Reverse (-)

526784 .. 528532

Gene Structure 1749 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG008100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGAGGCTCGAGCAGTTGAAAGAACTTGTTTTGAATGGTAATAATGATTTGGGAGGTGTTATTCCTTGGTGGGTTGGTAATTTCTCAGCACAGTTGGAAAAGCTAGATGTGGGTTTTAATTCATTTCATGGGGAGATTCCTCAAAGCTTGTTGTACTTGAAATCTCTCAAGTATTTGGATCTTGGGAACAATAATTTATCTGGCAGTCTTAGTGATTTTCACCAGTCTTTGGTGTTTCTCAATCTTGGATCGAACCAGTTTTCGGGTACTTTACCTTGTTTCTCTACTTGTGAGCAGTCTCTTAGAGTTTTGAATCTGGCTAACAATTCTGTGGTCGGAGGCATACCTACATGTATTGCTTCACTTCAAGCTTTGCAACATCTGAACCTTTCATCCAATCAATTGACTTACGAGATGTCTCCAAGACTTGTGTTTTCAGAGAAGCTTCTTCTCTTGGACTTGAGTAACAATGAGTTGTCTGGTCCTCTTCCGAGCAAGGTTGCAGAGACAACGGATAAATCCGGGCTTGTTCTTCTTGATTTGTCTCACAATCGTTTCTCTGGTGAAATCCCATTGAAGATTACAGAACTGAAGAGCCTGCAGGCACTGTTTCTATCGCACAATCTTCTTGTTGGGGAAATTCCCGCGAGGATTGGCAACCTAACCTATCTACAAGTGATTGATCTCTCACACAACTCATTATCAGGTTCAATTCCATTAAACATCGTTGGTTGTTTTCAGCTGCTTGCATTGATACTCAATAACAACAATCTTTCTGGTGAAATTCAACCTGAACTTGATGCATTGGATAGCTTGAAGATACTGGATATTAGCAACAACAAGATATCTGGGGAAATCCCACTTACTTTGGCTGGCTGTAAATCACTCGAGATTGTAGATTTCAGCTCCAACAATCTCTCCGGAACTTTGAGTGATGCAATAACCAAATGGTCAAATCTCAGGTATCTGTCCCTTGCTCGTAATGAATTTGCTGGAAATCTGCCTAGTTGGCTCTTTACTTTTGAAGCGATCAGAATGATGGATTTCTCAGGAAACAAATTTTCTGGCTTCATACCAGAGGGTAATTTTAACATGAGCATAAATTTTAACAATGGAGAGGTTGATAGAATGCAGAGAGATCCATTTGTTTCAATGCAGAATGTGGATACAAAAGTGTTGATTGTTGTCACTGGTAGTATTGAATTAAGCTTCAGTTACATACTATCTTCAATGGTTGGAATCGATTTCTCTAACAATGTACTCATTGGGGAGGTTCCAGTGGGGCTGTTTGGATTACATGGTTTGGAATACTTGAATCTTTCGCACAATTTTCTTCATGGTGGGGTTCCGGATTTAGAAAAGATGTGGAGTTTAAAGGCCTTAGATTTGTCCCATAATGCTTTATCAGGTCACATTCCAGGAAACATTTCCAGCCTTCCGGACCTGACTCGTTTGGATTTGTCATATAACTCTTTTTCTGGGTTTGTGACCAAGAAGCAAGGATATCACAGGTTTCCGGGAGCATTTGCTGGAAATCCAAATTTGTGTTTAGAGTCCCCTGATGGAGGGTGTGATCCGGCAAGCCTTCCGGTGGTGCCCGGGAAGGCATTTGAAGGGGAAGAAGAGGTTGAGGGGCGGATTTCTGTTTGGGTTTTTTGTGTAAGTGCATTCCTCAGTTTCTACTTTGGGGGCTTGGCCCTTTTTTGCTCCCCTCGAGCTCGGAAATACATTCTGCATACAAAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0007275 GO:0008150 GO:0009791 GO:0009888 GO:0009908 GO:0010073 GO:0010075 GO:0012505 GO:0016020 GO:0022414 GO:0031984 GO:0032501 GO:0032502 GO:0040008 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0048367 GO:0048507 GO:0048509 GO:0048608 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0061458 GO:0065007 GO:0071944 GO:0090567 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

582

Amino Acids

63.63

Weight (kDa)

5.22

Isoelectric Point (pI)

28.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	178 - 328	1.3e-07	Leucine-rich repeat region
LRR_4	PF12799	271 - 312	1.4e-06	Leucine Rich repeats (2 copies)
LRR_8	PF13855	455 - 491	7e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016622)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65380
fragaria_vesca	FvH4_6g00680
prunus_persica	Prupe.6G359800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0448121
rosa_laevigata	RLG00000025945 RLG00000026021
rosa_multiflora	Rmu_sc0005969.1_g000028
rosa_roxburghii	Rroxscaffold_6G00426250
rosa_rugosa	Rorug02G0608300
rosa_samantha	Rh3BG007600 Rh3CG007600 Rh3DG008100 Rh5DG014100
rosa_wichuraiana	Rw3G000630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1594
AccB7I	CCANNNNNTGG	1 cut(s)	229
AccII	CGCG	1 cut(s)	647
AccIII	TCCGGA	3 cut(s)	920, 1348, 1438
AciI	CCGC	2 cut(s)	645, 1636
AclWI	GGATC	4 cut(s)	186, 256, 1133, 1568
AcsI	RAATTY	6 cut(s)	639, 783, 986, 1058, 1102, 1540
AcuI	CTGAAG	2 cut(s)	611, 1195
AfaI	GTAC	3 cut(s)	155, 268, 1260
AfiI	CCNNNNNNNGG	4 cut(s)	229, 262, 1565, 1591
AflIII	ACRYGT	1 cut(s)	350
AjnI	CCWGG	1 cut(s)	1417
AloI	GAACNNNNNNTCC	2 cut(s)	377, 409
Alw21I	GWGCWC	1 cut(s)	1720
Alw26I	GTCTC	4 cut(s)	303, 423, 500, 549
AlwI	GGATC	4 cut(s)	186, 256, 1133, 1568
AlwNI	CAGNNNCTG	1 cut(s)	607
Ama87I	CYCGRG	4 cut(s)	8, 887, 1598, 1713
Aor13HI	TCCGGA	3 cut(s)	920, 1348, 1438
AoxI	GGCC	2 cut(s)	1377, 1695
ApeKI	GCWGC	1 cut(s)	742
ApoI	RAATTY	6 cut(s)	639, 783, 986, 1058, 1102, 1540
Asp700I	GAANNNNTTC	1 cut(s)	1426
AspS9I	GGNCC	3 cut(s)	482, 1441, 1696
AsuC2I	CCSGG	4 cut(s)	523, 1518, 1599, 1600
AsuHPI	GGTGA	3 cut(s)	212, 575, 791
AvaI	CYCGRG	4 cut(s)	8, 887, 1598, 1713
AvaII	GGWCC	2 cut(s)	482, 1441
BaeGI	GKGCMC	1 cut(s)	1599
BaeI	ACNNNNGTAYC	2 cut(s)	1158, 1191
BanI	GGYRCC	1 cut(s)	1594
BanII	GRGCYC	1 cut(s)	1720
Bbv12I	GWGCWC	1 cut(s)	1720
BbvI	GCAGC	1 cut(s)	729
BccI	CCATC	2 cut(s)	1033, 1556
BciT130I	CCWGG	1 cut(s)	1419
BciVI	GTATCC	1 cut(s)	1159
BcnI	CCSGG	4 cut(s)	523, 1518, 1599, 1600
BcoDI	GTCTC	4 cut(s)	303, 423, 500, 549
BfaI	CTAG	2 cut(s)	104, 1005
BfmI	CTRYAG	1 cut(s)	599
BfuI	GTATCC	1 cut(s)	1159
BglI	GCCNNNNNGGC	1 cut(s)	1009
BisI	GCNGC	1 cut(s)	743
BlsI	GCNGC	1 cut(s)	744
Bme1390I	CCNGG	5 cut(s)	523, 1419, 1518, 1599, 1600
Bme18I	GGWCC	2 cut(s)	482, 1441
BmeT110I	CYCGRG	4 cut(s)	8, 887, 1598, 1713
BmgT120I	GGNCC	3 cut(s)	482, 1441, 1696
BmiI	GGNNCC	3 cut(s)	1275, 1347, 1596
BmrFI	CCNGG	5 cut(s)	523, 1419, 1518, 1599, 1600
BmsI	GCATC	2 cut(s)	790, 925
BpuEI	CTTGAG	2 cut(s)	152, 481
BpuMI	CCSGG	4 cut(s)	523, 1518, 1599, 1600
Bsa29I	ATCGAT	1 cut(s)	1242
BsaJI	CCNNGG	2 cut(s)	65, 1598
BsaWI	WCCGGW	4 cut(s)	920, 1348, 1438, 1588
BsaXI	ACNNNNNCTCC	2 cut(s)	902, 932
Bsc4I	CCNNNNNNNGG	4 cut(s)	229, 262, 1565, 1591
Bse1I	ACTGG	5 cut(s)	223, 256, 828, 1195, 1277
BseAI	TCCGGA	3 cut(s)	920, 1348, 1438
BseBI	CCWGG	1 cut(s)	1419
BseCI	ATCGAT	1 cut(s)	1242
BseDI	CCNNGG	2 cut(s)	65, 1598
BseGI	GGATG	1 cut(s)	392
BseLI	CCNNNNNNNGG	4 cut(s)	229, 262, 1565, 1591
BseMII	CTCAG	4 cut(s)	99, 973, 1062, 1687
BseNI	ACTGG	5 cut(s)	223, 256, 828, 1195, 1277
BseSI	GKGCMC	1 cut(s)	1599
BseXI	GCAGC	1 cut(s)	729
Bsh1236I	CGCG	1 cut(s)	647
BshFI	GGCC	2 cut(s)	1379, 1697
BshNI	GGYRCC	1 cut(s)	1594
BshVI	ATCGAT	1 cut(s)	1242
BsiHKAI	GWGCWC	1 cut(s)	1720
BsiHKCI	CYCGRG	4 cut(s)	8, 887, 1598, 1713
BsiSI	CCGG	8 cut(s)	522, 921, 1349, 1439, 1517, 1577, 1589, 1599
BslFI	GGGAC	3 cut(s)	955, 1375, 1540
BslI	CCNNNNNNNGG	4 cut(s)	229, 262, 1565, 1591
BsmAI	GTCTC	4 cut(s)	303, 423, 500, 549
BsmFI	GGGAC	3 cut(s)	955, 1375, 1540
BsmI	GAATGC	2 cut(s)	1134, 1667
BsnI	GGCC	2 cut(s)	1379, 1697
BsoBI	CYCGRG	4 cut(s)	8, 887, 1598, 1713
Bsp1286I	GDGCHC	2 cut(s)	1599, 1720
Bsp13I	TCCGGA	3 cut(s)	920, 1348, 1438
Bsp143I	GATC	6 cut(s)	178, 248, 682, 1029, 1138, 1573
BspACI	CCGC	2 cut(s)	645, 1636
BspANI	GGCC	2 cut(s)	1379, 1697
BspCNI	CTCAG	4 cut(s)	98, 972, 1061, 1686
BspDI	ATCGAT	1 cut(s)	1242
BspEI	TCCGGA	3 cut(s)	920, 1348, 1438
BspFNI	CGCG	1 cut(s)	647
BspLI	GGNNCC	3 cut(s)	1275, 1347, 1596
BspMAI	CTGCAG	1 cut(s)	603
BspPI	GGATC	4 cut(s)	186, 256, 1133, 1568
BspQI	GCTCTTC	1 cut(s)	587
BspT107I	GGYRCC	1 cut(s)	1594
BsrI	ACTGG	5 cut(s)	223, 256, 828, 1195, 1277
BssECI	CCNNGG	2 cut(s)	65, 1598
BssMI	GATC	6 cut(s)	178, 248, 682, 1029, 1138, 1573
BssT1I	CCWWGG	1 cut(s)	65
Bst2UI	CCWGG	1 cut(s)	1419
Bst4CI	ACNGT	2 cut(s)	93, 609
Bst6I	CTCTTC	3 cut(s)	492, 587, 1617
BstC8I	GCNNGC	5 cut(s)	599, 603, 747, 874, 1582
BstDEI	CTNAG	8 cut(s)	85, 209, 302, 959, 1048, 1381, 1673, 1746
BstENI	CCTNNNNNAGG	1 cut(s)	1563
BstF5I	GGATG	1 cut(s)	392
BstFNI	CGCG	1 cut(s)	647
BstKTI	GATC	6 cut(s)	181, 251, 685, 1032, 1141, 1576
BstMAI	GTCTC	4 cut(s)	303, 423, 500, 549
BstMBI	GATC	6 cut(s)	178, 248, 682, 1029, 1138, 1573
BstMWI	GCNNNNNNNGC	1 cut(s)	1009
BstNI	CCWGG	1 cut(s)	1419
BstNSI	RCATGY	1 cut(s)	354
BstSCI	CCNGG	5 cut(s)	521, 1417, 1516, 1597, 1598
BstSFI	CTRYAG	1 cut(s)	599
BstSLI	GKGCMC	1 cut(s)	1599
BstUI	CGCG	1 cut(s)	647
BstV1I	GCAGC	1 cut(s)	729
BstX2I	RGATCY	2 cut(s)	178, 1138
BstYI	RGATCY	2 cut(s)	178, 1138
Bsu15I	ATCGAT	1 cut(s)	1242
BsuI	GTATCC	1 cut(s)	1159
BsuRI	GGCC	2 cut(s)	1379, 1697
BsuTUI	ATCGAT	1 cut(s)	1242
BtsCI	GGATG	1 cut(s)	392
BtsIMutI	CAGTG	3 cut(s)	605, 1188, 1284
Cac8I	GCNNGC	5 cut(s)	599, 603, 747, 874, 1582
CaiI	CAGNNNCTG	1 cut(s)	607
Cfr13I	GGNCC	3 cut(s)	482, 1441, 1696
Cfr9I	CCCGGG	1 cut(s)	1598
ClaI	ATCGAT	1 cut(s)	1242
Csp6I	GTAC	3 cut(s)	154, 267, 1259
CspCI	CAANNNNNGTGG	2 cut(s)	849, 884
CviAII	CATG	5 cut(s)	128, 351, 1093, 1298, 1337
CviQI	GTAC	3 cut(s)	154, 267, 1259
DdeI	CTNAG	8 cut(s)	85, 209, 302, 959, 1048, 1381, 1673, 1746
DpnI	GATC	6 cut(s)	180, 250, 684, 1031, 1140, 1575
DpnII	GATC	6 cut(s)	178, 248, 682, 1029, 1138, 1573
DraI	TTTAAA	1 cut(s)	1374
Eam1104I	CTCTTC	3 cut(s)	492, 587, 1617
EarI	CTCTTC	3 cut(s)	492, 587, 1617
EciI	GGCGGA	1 cut(s)	1651
Ecl136II	GAGCTC	1 cut(s)	1718
Eco130I	CCWWGG	1 cut(s)	65
Eco147I	AGGCCT	1 cut(s)	1379
Eco24I	GRGCYC	1 cut(s)	1720
Eco32I	GATATC	2 cut(s)	846, 1505
Eco47I	GGWCC	2 cut(s)	482, 1441
Eco53kI	GAGCTC	1 cut(s)	1718
Eco57I	CTGAAG	2 cut(s)	611, 1195
Eco88I	CYCGRG	4 cut(s)	8, 887, 1598, 1713
EcoICRI	GAGCTC	1 cut(s)	1718
EcoNI	CCTNNNNNAGG	1 cut(s)	1563
EcoRII	CCWGG	1 cut(s)	1417
EcoRV	GATATC	2 cut(s)	846, 1505
EcoT14I	CCWWGG	1 cut(s)	65
EcoT22I	ATGCAT	1 cut(s)	805
EcoT38I	GRGCYC	1 cut(s)	1720
ErhI	CCWWGG	1 cut(s)	65
FaeI	CATG	5 cut(s)	131, 354, 1096, 1301, 1340
FaqI	GGGAC	3 cut(s)	955, 1375, 1540
FatI	CATG	5 cut(s)	127, 350, 1092, 1297, 1336
FauI	CCCGC	1 cut(s)	652
Fnu4HI	GCNGC	1 cut(s)	743
FokI	GGATG	1 cut(s)	379
FriOI	GRGCYC	1 cut(s)	1720
Fsp4HI	GCNGC	1 cut(s)	743
FspBI	CTAG	2 cut(s)	104, 1005
GluI	GCNGC	1 cut(s)	743
HaeIII	GGCC	2 cut(s)	1379, 1697
HapII	CCGG	8 cut(s)	522, 921, 1349, 1439, 1517, 1577, 1589, 1599
Hin1II	CATG	5 cut(s)	131, 354, 1096, 1301, 1340
HindIII	AAGCTT	5 cut(s)	145, 369, 443, 1207, 1743
HinfI	GANTC	6 cut(s)	136, 313, 1239, 1315, 1447, 1553
HpaII	CCGG	8 cut(s)	522, 921, 1349, 1439, 1517, 1577, 1589, 1599
HphI	GGTGA	3 cut(s)	212, 575, 791
Hpy188I	TCNGA	6 cut(s)	338, 384, 439, 492, 1034, 1722
Hpy188III	TCNNGA	6 cut(s)	536, 889, 921, 1050, 1349, 1439
HpyAV	CCTTC	4 cut(s)	1445, 1595, 1597, 1607
HpyCH4III	ACNGT	2 cut(s)	93, 609
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1009
HpyF3I	CTNAG	8 cut(s)	85, 209, 302, 959, 1048, 1381, 1673, 1746
Hsp92II	CATG	5 cut(s)	131, 354, 1096, 1301, 1340
Kpn2I	TCCGGA	3 cut(s)	920, 1348, 1438
Kzo9I	GATC	6 cut(s)	178, 248, 682, 1029, 1138, 1573
LguI	GCTCTTC	1 cut(s)	587
LmnI	GCTCC	3 cut(s)	911, 1520, 1712
Lsp1109I	GCAGC	1 cut(s)	729
LweI	GCATC	2 cut(s)	790, 925
MaeI	CTAG	2 cut(s)	104, 1005
MaeIII	GTNAC	5 cut(s)	464, 1186, 1214, 1409, 1486
MalI	GATC	6 cut(s)	180, 250, 684, 1031, 1140, 1575
MboI	GATC	6 cut(s)	178, 248, 682, 1029, 1138, 1573
MfeI	CAATTG	1 cut(s)	401
MflI	RGATCY	2 cut(s)	178, 1138
MhlI	GDGCHC	2 cut(s)	1599, 1720
MlyI	GAGTC	2 cut(s)	1441, 1562
MmeI	TCCRAC	4 cut(s)	75, 316, 933, 1216
Mph1103I	ATGCAT	1 cut(s)	805
MroI	TCCGGA	3 cut(s)	920, 1348, 1438
MroXI	GAANNNNTTC	1 cut(s)	1426
MseI	TTAA	6 cut(s)	117, 719, 1089, 1107, 1205, 1373
MspA1I	CMGCKG	1 cut(s)	742
MspI	CCGG	8 cut(s)	522, 921, 1349, 1439, 1517, 1577, 1589, 1599
MspR9I	CCNGG	5 cut(s)	523, 1419, 1518, 1599, 1600
MunI	CAATTG	1 cut(s)	401
Mva1269I	GAATGC	2 cut(s)	1134, 1667
MvaI	CCWGG	1 cut(s)	1419
MvnI	CGCG	1 cut(s)	647
MwoI	GCNNNNNNNGC	1 cut(s)	1009
NciI	CCSGG	4 cut(s)	523, 1518, 1599, 1600
NdeII	GATC	6 cut(s)	178, 248, 682, 1029, 1138, 1573
NlaIII	CATG	5 cut(s)	131, 354, 1096, 1301, 1340
NlaIV	GGNNCC	3 cut(s)	1275, 1347, 1596
NmuCI	GTSAC	3 cut(s)	1186, 1409, 1486
NsiI	ATGCAT	1 cut(s)	805
NspI	RCATGY	1 cut(s)	354
PaeR7I	CTCGAG	3 cut(s)	8, 887, 1713
PceI	AGGCCT	1 cut(s)	1379
PciI	ACATGT	1 cut(s)	350
PciSI	GCTCTTC	1 cut(s)	587
PctI	GAATGC	2 cut(s)	1134, 1667
PdmI	GAANNNNTTC	1 cut(s)	1426
PfeI	GAWTC	4 cut(s)	136, 313, 1239, 1315
PflMI	CCANNNNNTGG	1 cut(s)	229
PfoI	TCCNGGA	2 cut(s)	1417, 1516
PkrI	GCNGC	1 cut(s)	744
PleI	GAGTC	2 cut(s)	1441, 1561
PpsI	GAGTC	2 cut(s)	1441, 1561
PscI	ACATGT	1 cut(s)	350
Psp124BI	GAGCTC	1 cut(s)	1720
Psp6I	CCWGG	1 cut(s)	1417
PspGI	CCWGG	1 cut(s)	1417
PspN4I	GGNNCC	3 cut(s)	1275, 1347, 1596
PspPI	GGNCC	3 cut(s)	482, 1441, 1696
PspXI	VCTCGAGB	2 cut(s)	8, 1713
PstI	CTGCAG	1 cut(s)	603
PstNI	CAGNNNCTG	1 cut(s)	607
PsuI	RGATCY	2 cut(s)	178, 1138
PvuII	CAGCTG	1 cut(s)	742
RsaI	GTAC	3 cut(s)	155, 268, 1260
RsaNI	GTAC	3 cut(s)	154, 267, 1259
SacI	GAGCTC	1 cut(s)	1720
SapI	GCTCTTC	1 cut(s)	587
SaqAI	TTAA	6 cut(s)	117, 719, 1089, 1107, 1205, 1373
SatI	GCNGC	1 cut(s)	743
Sau3AI	GATC	6 cut(s)	178, 248, 682, 1029, 1138, 1573
Sau96I	GGNCC	3 cut(s)	482, 1441, 1696
SbfI	CCTGCAGG	1 cut(s)	603
SchI	GAGTC	2 cut(s)	1441, 1562
ScrFI	CCNGG	5 cut(s)	523, 1419, 1518, 1599, 1600
SdaI	CCTGCAGG	1 cut(s)	603
SduI	GDGCHC	2 cut(s)	1599, 1720
SfaNI	GCATC	2 cut(s)	790, 925
SfcI	CTRYAG	1 cut(s)	599
Sfr274I	CTCGAG	3 cut(s)	8, 887, 1713
SinI	GGWCC	2 cut(s)	482, 1441
SlaI	CTCGAG	3 cut(s)	8, 887, 1713
SmaI	CCCGGG	1 cut(s)	1600
SmlI	CTYRAG	5 cut(s)	8, 167, 460, 887, 1713
SmoI	CTYRAG	5 cut(s)	8, 167, 460, 887, 1713
Sse8387I	CCTGCAGG	1 cut(s)	603
SseBI	AGGCCT	1 cut(s)	1379
SsiI	CCGC	2 cut(s)	645, 1636
SspMI	CTAG	2 cut(s)	104, 1005
SstI	GAGCTC	1 cut(s)	1720
StuI	AGGCCT	1 cut(s)	1379
StyD4I	CCNGG	5 cut(s)	521, 1417, 1516, 1597, 1598
StyI	CCWWGG	1 cut(s)	65
TaaI	ACNGT	2 cut(s)	93, 609
TaqI	TCGA	5 cut(s)	9, 251, 888, 1242, 1714
TatI	WGTACW	2 cut(s)	153, 1258
TfiI	GAWTC	4 cut(s)	136, 313, 1239, 1315
Tru1I	TTAA	6 cut(s)	117, 719, 1089, 1107, 1205, 1373
Tru9I	TTAA	6 cut(s)	117, 719, 1089, 1107, 1205, 1373
TscAI	CASTG	3 cut(s)	612, 1195, 1284
TseFI	GTSAC	3 cut(s)	1186, 1409, 1486
TseI	GCWGC	1 cut(s)	742
Tsp45I	GTSAC	3 cut(s)	1186, 1409, 1486
TspDTI	ATGAA	6 cut(s)	111, 116, 381, 999, 1060, 1325
TspGWI	ACGGA	1 cut(s)	527
TspMI	CCCGGG	1 cut(s)	1598
TspRI	CASTG	3 cut(s)	612, 1195, 1284
Van91I	CCANNNNNTGG	1 cut(s)	229
VpaK11BI	GGWCC	2 cut(s)	482, 1441
XagI	CCTNNNNNAGG	1 cut(s)	1563
XapI	RAATTY	6 cut(s)	639, 783, 986, 1058, 1102, 1540
XceI	RCATGY	1 cut(s)	354
XhoI	CTCGAG	3 cut(s)	8, 887, 1713
XmaI	CCCGGG	1 cut(s)	1598
XmnI	GAANNNNTTC	1 cut(s)	1426
XspI	CTAG	2 cut(s)	104, 1005
Zsp2I	ATGCAT	1 cut(s)	805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.