Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0016969

Physical Location & Seq

Genomic Coordinates Reverse (-)

3182447 .. 3205979

Gene Structure 23533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG046700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGGAGATGAGTAGAGCCCGCTATCCATGGCGAGTGTTGACATTTGATGAGAACGGCGGCATACAACAAGTTTTGGAGCATTCTGGTGGAGCCTTCGAAGACCATGTGGTTCAGACTTGGGACGAATCGGATTCCCGAAGACTAGGTGTGGTTGCCGCCTCTATGAATGACCGGTCACTAGCTGTGGCTAGAAGAAATGGCACAGTTGAGGTTCGTGATCGTCTTAGCGGGCAGATCGGTCTCACCTTCCCTCATCTCACTAATGAGAGTGATCCTTTTGTGGGGCTACACCTATTTACAAAGCAGCAGCCAGGAGCATTTGGGTCATTGCTTAGTTGTACAGTTCAAGGAAATGCAAGGATAATATCTTTTGAAGTGGACAACTCTTCTAGGACTTTGCAGCAGTGGAAAGTGAGAGAGGATGTCTTGTGTTGCAAGGTTGACGGGAGTGAACGTGTTTGTCTATTCGGAGGGAAGAATGAAATGAATATATGGGATCTTGAATATAATGTGAAGTCTTGGCCAACAAAAGAGCGTCCAATTCAGAGTAGAAAACTTTGGTGGACATCTGCCACCTTTCTGACAAGAGATAATCCTCATGTATTTGTGGCGGGCACCAACAAAAATCAGGTTCATATTTATGATGCTCGAGAGGATATTGATGAGCCTTGCAACATATATGACATACAGAGCAGCTGTCTAAAAAGGCTACAGAACCGTGACACTCCAATTCGAGCTATTGCTGAAGATAAAGATGGTTATACGGTTTATGCAGGCAACGATTGTGGTAATCTTGTTTCTTTGGATACACGCACAGCATCATCGCAGAAGTTGTTGGACAAACATGGAATTAGGTGGAAGGGAGAAGTACCAAATGCTCCTGACAACGGCCACCGTGGCCGTGGCTGCGGACGTAGCGCAACTGGTGAAGCTTTAACTGACAGGCCTCCTTTACCAAAAGGACATGGTTATCTTTCTTTGGGAACCTGGGCGGATGCGCATGCATCATCGCAGAAGTTGTTGGAAAAACATGGAATTAGGTGGAAGGGAGAAGTACCAAATGCTCCTGACAACGGCCACCGTGGCCGTGGCTGCGGACGTAGCGCAACTGGTGAAGCTTTAACTGACAGGCCTCCTTTACCAAAAGGACATGGTTATCTTTCTTTGGGAACCTGGGCGGATGCGCATGCATCATCGCAGAAGTTGTTGGACAAACATGGAATTAGGTGGAAGGGAGAAGTACCAAATGCTCCTGACAACGGCCACCGTGGCCGTGGCTGCGGACGTAGCGCAACTGGTGAAGCTTTAACTGACAGGCCTCCTTTACCAAAAGGACATGGTTATCTTTCTTTGGGAACCTGGGCGGATGCGCATGGTAATGCCTCTAAGATATACTCCAGTTGTTCTGCTCTCATGTATTGTCGTGTTTGTGGTATGGAAGGAGACCACTGGCGTCGAAATTGTCCAAACCGGCATCGACCAGAACCAGAACCAACACCTGCTGTTCCGATCAATAAAAAAAAAAAATCAAAACCAGTTTTCCAGACACAGAGAAAGAAAGAATCAAATTCCGCTGCAGGCACCAACAACAGCTCATATGAGACCAAAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0022613 GO:0030684 GO:0030687 GO:0031974 GO:0031981 GO:0032991 GO:0042254 GO:0042273 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013 GO:0071840 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

537

Amino Acids

59.52

Weight (kDa)

9.0

Isoelectric Point (pI)

36.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016969)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr0c30g0501231 RchiOBHm_Chr3g0452771 RchiOBHm_Chr3g0452851
rosa_laevigata	RLG00000025569
rosa_roxburghii	Rroxscaffold_6G00429830
rosa_rugosa	Rorug02G0643100
rosa_samantha	Rh3AG045600 Rh3AG045800 Rh3BG048000 Rh3BG048200 Rh3CG046500 Rh3CG046700 Rh3DG047100 Rh3DG047600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1507
Acc16I	TGCGCA	3 cut(s)	999, 1185, 1371
Acc36I	ACCTGC	1 cut(s)	1507
AccB1I	GGYRCC	2 cut(s)	614, 1580
AclWI	GGATC	2 cut(s)	266, 504
AcoI	YGGCCR	7 cut(s)	521, 889, 898, 1075, 1084, 1261, 1270
AcsI	RAATTY	1 cut(s)	1567
AcuI	CTGAAG	1 cut(s)	765
AcyI	GRCGYC	1 cut(s)	1453
AfaI	GTAC	4 cut(s)	340, 870, 1056, 1242
AfiI	CCNNNNNNNGG	4 cut(s)	281, 887, 1073, 1259
AflIII	ACRYGT	1 cut(s)	454
AgeI	ACCGGT	1 cut(s)	171
AgsI	TTSAA	3 cut(s)	347, 374, 503
AjnI	CCWGG	4 cut(s)	310, 986, 1172, 1358
AluBI	AGCT	7 cut(s)	182, 696, 737, 932, 1118, 1304, 1593
AluI	AGCT	7 cut(s)	182, 696, 737, 932, 1118, 1304, 1593
Alw26I	GTCTC	3 cut(s)	245, 1437, 1595
AlwI	GGATC	2 cut(s)	266, 504
Ama87I	CYCGRG	1 cut(s)	648
ApeKI	GCWGC	8 cut(s)	304, 307, 400, 693, 906, 1092, 1278, 1574
ApoI	RAATTY	1 cut(s)	1567
AsiGI	ACCGGT	1 cut(s)	171
AspLEI	GCGC	6 cut(s)	920, 1000, 1106, 1186, 1292, 1372
AsuHPI	GGTGA	4 cut(s)	235, 938, 1124, 1310
AsuII	TTCGAA	1 cut(s)	96
AvaI	CYCGRG	1 cut(s)	648
BaeGI	GKGCMC	1 cut(s)	617
BalI	TGGCCA	1 cut(s)	523
BanI	GGYRCC	2 cut(s)	614, 1580
BanII	GRGCYC	1 cut(s)	19
BbsI	GAAGAC	2 cut(s)	105, 145
BbvI	GCAGC	8 cut(s)	316, 319, 412, 705, 893, 1079, 1265, 1561
BccI	CCATC	1 cut(s)	749
BceAI	ACGGC	7 cut(s)	70, 885, 904, 1071, 1090, 1257, 1276
BciT130I	CCWGG	4 cut(s)	312, 988, 1174, 1360
BciVI	GTATCC	1 cut(s)	799
BcoDI	GTCTC	3 cut(s)	245, 1437, 1595
BfaI	CTAG	4 cut(s)	143, 179, 189, 390
BfmI	CTRYAG	2 cut(s)	710, 1575
BfuAI	ACCTGC	1 cut(s)	1507
BfuI	GTATCC	1 cut(s)	799
BglI	GCCNNNNNGGC	3 cut(s)	897, 1083, 1269
Bme1390I	CCNGG	4 cut(s)	312, 988, 1174, 1360
BmeT110I	CYCGRG	1 cut(s)	648
BmiI	GGNNCC	6 cut(s)	91, 616, 985, 1171, 1357, 1582
BmrFI	CCNGG	4 cut(s)	312, 988, 1174, 1360
BmsI	GCATC	8 cut(s)	634, 827, 985, 1013, 1171, 1199, 1357, 1483
BpiI	GAAGAC	2 cut(s)	105, 145
BpmI	CTGGAG	1 cut(s)	1381
Bpu14I	TTCGAA	1 cut(s)	96
BsaHI	GRCGYC	1 cut(s)	1453
BsaI	GGTCTC	3 cut(s)	245, 1437, 1595
BsaWI	WCCGGW	1 cut(s)	171
BsaXI	ACNNNNNCTCC	2 cut(s)	439, 469
Bsc4I	CCNNNNNNNGG	4 cut(s)	281, 887, 1073, 1259
Bse118I	RCCGGY	2 cut(s)	171, 1470
Bse1I	ACTGG	6 cut(s)	928, 1114, 1300, 1398, 1454, 1535
Bse3DI	GCAATG	1 cut(s)	326
BseBI	CCWGG	4 cut(s)	312, 988, 1174, 1360
BseGI	GGATG	4 cut(s)	427, 1000, 1186, 1372
BseLI	CCNNNNNNNGG	4 cut(s)	281, 887, 1073, 1259
BseMI	GCAATG	1 cut(s)	326
BseNI	ACTGG	6 cut(s)	928, 1114, 1300, 1398, 1454, 1535
BseSI	GKGCMC	1 cut(s)	617
BseXI	GCAGC	8 cut(s)	316, 319, 412, 705, 893, 1079, 1265, 1561
BshNI	GGYRCC	2 cut(s)	614, 1580
BshTI	ACCGGT	1 cut(s)	171
BsiHKCI	CYCGRG	1 cut(s)	648
BsiSI	CCGG	2 cut(s)	172, 1471
BslFI	GGGAC	1 cut(s)	134
BslI	CCNNNNNNNGG	4 cut(s)	281, 887, 1073, 1259
BsmAI	GTCTC	3 cut(s)	245, 1437, 1595
BsmFI	GGGAC	1 cut(s)	134
BsmI	GAATGC	1 cut(s)	79
Bso31I	GGTCTC	3 cut(s)	245, 1437, 1595
BsoBI	CYCGRG	1 cut(s)	648
Bsp119I	TTCGAA	1 cut(s)	96
Bsp1286I	GDGCHC	2 cut(s)	19, 617
Bsp1407I	TGTACA	1 cut(s)	338
Bsp143I	GATC	5 cut(s)	217, 234, 271, 496, 1509
Bsp19I	CCATGG	1 cut(s)	26
BspLI	GGNNCC	6 cut(s)	91, 616, 985, 1171, 1357, 1582
BspMAI	CTGCAG	1 cut(s)	1579
BspMI	ACCTGC	1 cut(s)	1507
BspPI	GGATC	2 cut(s)	266, 504
BspT104I	TTCGAA	1 cut(s)	96
BspT107I	GGYRCC	2 cut(s)	614, 1580
BspTNI	GGTCTC	3 cut(s)	245, 1437, 1595
BsrDI	GCAATG	1 cut(s)	326
BsrFI	RCCGGY	2 cut(s)	171, 1470
BsrGI	TGTACA	1 cut(s)	338
BsrI	ACTGG	6 cut(s)	928, 1114, 1300, 1398, 1454, 1535
BssAI	RCCGGY	2 cut(s)	171, 1470
BssMI	GATC	5 cut(s)	217, 234, 271, 496, 1509
BssNI	GRCGYC	1 cut(s)	1453
BssT1I	CCWWGG	1 cut(s)	26
Bst2UI	CCWGG	4 cut(s)	312, 988, 1174, 1360
Bst4CI	ACNGT	7 cut(s)	205, 343, 719, 766, 896, 1082, 1268
Bst6I	CTCTTC	1 cut(s)	391
BstACI	GRCGYC	1 cut(s)	1453
BstAUI	TGTACA	1 cut(s)	338
BstBI	TTCGAA	1 cut(s)	96
BstC8I	GCNNGC	7 cut(s)	19, 230, 613, 775, 1002, 1188, 1579
BstDEI	CTNAG	3 cut(s)	224, 332, 1386
BstDSI	CCRYGG	7 cut(s)	26, 895, 901, 1081, 1087, 1267, 1273
BstF5I	GGATG	4 cut(s)	427, 1000, 1186, 1372
BstHHI	GCGC	6 cut(s)	920, 1000, 1106, 1186, 1292, 1372
BstKTI	GATC	5 cut(s)	220, 237, 274, 499, 1512
BstMAI	GTCTC	3 cut(s)	245, 1437, 1595
BstMBI	GATC	5 cut(s)	217, 234, 271, 496, 1509
BstMWI	GCNNNNNNNGC	9 cut(s)	897, 906, 915, 1083, 1092, 1101, 1269, 1278, 1287
BstNI	CCWGG	4 cut(s)	312, 988, 1174, 1360
BstNSI	RCATGY	2 cut(s)	1004, 1190
BstSCI	CCNGG	4 cut(s)	310, 986, 1172, 1358
BstSFI	CTRYAG	2 cut(s)	710, 1575
BstSLI	GKGCMC	1 cut(s)	617
BstV1I	GCAGC	8 cut(s)	316, 319, 412, 705, 893, 1079, 1265, 1561
BstV2I	GAAGAC	2 cut(s)	105, 145
BstX2I	RGATCY	1 cut(s)	496
BstYI	RGATCY	1 cut(s)	496
BsuI	GTATCC	1 cut(s)	799
BtgI	CCRYGG	7 cut(s)	26, 895, 901, 1081, 1087, 1267, 1273
BtgZI	GCGATG	3 cut(s)	807, 993, 1179
BtsCI	GGATG	4 cut(s)	427, 1000, 1186, 1372
BtsI	GCAGTG	1 cut(s)	410
BtsIMutI	CAGTG	2 cut(s)	410, 1447
BveI	ACCTGC	1 cut(s)	1507
Cac8I	GCNNGC	7 cut(s)	19, 230, 613, 775, 1002, 1188, 1579
CfoI	GCGC	6 cut(s)	920, 1000, 1106, 1186, 1292, 1372
Cfr10I	RCCGGY	2 cut(s)	171, 1470
CseI	GACGC	2 cut(s)	524, 1442
Csp6I	GTAC	4 cut(s)	339, 869, 1055, 1241
CspAI	ACCGGT	1 cut(s)	171
CspCI	CAANNNNNGTGG	2 cut(s)	766, 801
CviQI	GTAC	4 cut(s)	339, 869, 1055, 1241
DdeI	CTNAG	3 cut(s)	224, 332, 1386
DpnI	GATC	5 cut(s)	219, 236, 273, 498, 1511
DpnII	GATC	5 cut(s)	217, 234, 271, 496, 1509
EaeI	YGGCCR	7 cut(s)	521, 889, 898, 1075, 1084, 1261, 1270
Eam1104I	CTCTTC	1 cut(s)	391
EarI	CTCTTC	1 cut(s)	391
EciI	GGCGGA	3 cut(s)	1007, 1193, 1379
Eco130I	CCWWGG	1 cut(s)	26
Eco147I	AGGCCT	3 cut(s)	946, 1132, 1318
Eco24I	GRGCYC	1 cut(s)	19
Eco31I	GGTCTC	3 cut(s)	245, 1437, 1595
Eco57I	CTGAAG	1 cut(s)	765
Eco88I	CYCGRG	1 cut(s)	648
EcoRII	CCWGG	4 cut(s)	310, 986, 1172, 1358
EcoT14I	CCWWGG	1 cut(s)	26
EcoT22I	ATGCAT	2 cut(s)	1006, 1192
EcoT38I	GRGCYC	1 cut(s)	19
ErhI	CCWWGG	1 cut(s)	26
FaqI	GGGAC	1 cut(s)	134
FauI	CCCGC	3 cut(s)	26, 221, 604
FauNDI	CATATG	1 cut(s)	1597
FokI	GGATG	4 cut(s)	434, 1007, 1193, 1379
FriOI	GRGCYC	1 cut(s)	19
FspAI	RTGCGCAY	3 cut(s)	999, 1185, 1371
FspBI	CTAG	4 cut(s)	143, 179, 189, 390
FspI	TGCGCA	3 cut(s)	999, 1185, 1371
GlaI	GCGC	6 cut(s)	919, 999, 1105, 1185, 1291, 1371
GsuI	CTGGAG	1 cut(s)	1381
HapII	CCGG	2 cut(s)	172, 1471
HgaI	GACGC	2 cut(s)	524, 1442
HhaI	GCGC	6 cut(s)	920, 1000, 1106, 1186, 1292, 1372
Hin1I	GRCGYC	1 cut(s)	1453
Hin6I	GCGC	6 cut(s)	918, 998, 1104, 1184, 1290, 1370
HinP1I	GCGC	6 cut(s)	918, 998, 1104, 1184, 1290, 1370
HincII	GTYRAC	2 cut(s)	39, 442
HindII	GTYRAC	2 cut(s)	39, 442
HindIII	AAGCTT	3 cut(s)	930, 1116, 1302
HinfI	GANTC	3 cut(s)	125, 131, 1562
HpaII	CCGG	2 cut(s)	172, 1471
HphI	GGTGA	4 cut(s)	235, 938, 1124, 1310
Hpy166II	GTNNAC	5 cut(s)	39, 379, 442, 452, 564
Hpy188I	TCNGA	6 cut(s)	114, 130, 470, 546, 582, 1509
Hpy188III	TCNNGA	8 cut(s)	135, 215, 500, 650, 881, 1067, 1253, 1543
Hpy8I	GTNNAC	5 cut(s)	39, 379, 442, 452, 564
Hpy99I	CGWCG	1 cut(s)	1458
HpyAV	CCTTC	6 cut(s)	103, 256, 853, 1039, 1225, 1433
HpyCH4III	ACNGT	7 cut(s)	205, 343, 719, 766, 896, 1082, 1268
HpyCH4IV	ACGT	4 cut(s)	454, 913, 1099, 1285
HpyCH4V	TGCA	8 cut(s)	356, 400, 435, 672, 773, 1004, 1190, 1577
HpyF10VI	GCNNNNNNNGC	9 cut(s)	897, 906, 915, 1083, 1092, 1101, 1269, 1278, 1287
HpyF3I	CTNAG	3 cut(s)	224, 332, 1386
HpySE526I	ACGT	4 cut(s)	454, 913, 1099, 1285
Hsp92I	GRCGYC	1 cut(s)	1453
HspAI	GCGC	6 cut(s)	918, 998, 1104, 1184, 1290, 1370
Kzo9I	GATC	5 cut(s)	217, 234, 271, 496, 1509
LmnI	GCTCC	6 cut(s)	76, 89, 314, 883, 1069, 1255
Lsp1109I	GCAGC	8 cut(s)	316, 319, 412, 705, 893, 1079, 1265, 1561
LweI	GCATC	8 cut(s)	634, 827, 985, 1013, 1171, 1199, 1357, 1483
MaeI	CTAG	4 cut(s)	143, 179, 189, 390
MaeII	ACGT	4 cut(s)	454, 913, 1099, 1285
MaeIII	GTNAC	2 cut(s)	174, 719
MalI	GATC	5 cut(s)	219, 236, 273, 498, 1511
MboI	GATC	5 cut(s)	217, 234, 271, 496, 1509
MboII	GAAGA	6 cut(s)	110, 150, 204, 378, 487, 758
MflI	RGATCY	1 cut(s)	496
MhlI	GDGCHC	2 cut(s)	19, 617
MlsI	TGGCCA	1 cut(s)	523
MluCI	AATT	7 cut(s)	540, 729, 849, 1035, 1221, 1459, 1567
MluNI	TGGCCA	1 cut(s)	523
MmeI	TCCRAC	3 cut(s)	816, 1002, 1188
Mox20I	TGGCCA	1 cut(s)	523
Mph1103I	ATGCAT	2 cut(s)	1006, 1192
MscI	TGGCCA	1 cut(s)	523
MseI	TTAA	3 cut(s)	935, 1121, 1307
MslI	CAYNNNNRTG	3 cut(s)	84, 639, 1377
Msp20I	TGGCCA	1 cut(s)	523
MspA1I	CMGCKG	2 cut(s)	696, 1574
MspI	CCGG	2 cut(s)	172, 1471
MspR9I	CCNGG	4 cut(s)	312, 988, 1174, 1360
Mva1269I	GAATGC	1 cut(s)	79
MvaI	CCWGG	4 cut(s)	312, 988, 1174, 1360
MwoI	GCNNNNNNNGC	9 cut(s)	897, 906, 915, 1083, 1092, 1101, 1269, 1278, 1287
NcoI	CCATGG	1 cut(s)	26
NdeI	CATATG	1 cut(s)	1597
NdeII	GATC	5 cut(s)	217, 234, 271, 496, 1509
NlaIV	GGNNCC	6 cut(s)	91, 616, 985, 1171, 1357, 1582
NmuCI	GTSAC	2 cut(s)	174, 719
NsbI	TGCGCA	3 cut(s)	999, 1185, 1371
NsiI	ATGCAT	2 cut(s)	1006, 1192
NspI	RCATGY	2 cut(s)	1004, 1190
NspV	TTCGAA	1 cut(s)	96
PaeI	GCATGC	2 cut(s)	1004, 1190
PaeR7I	CTCGAG	1 cut(s)	648
PaqCI	CACCTGC	1 cut(s)	1507
PceI	AGGCCT	3 cut(s)	946, 1132, 1318
PctI	GAATGC	1 cut(s)	79
PfeI	GAWTC	3 cut(s)	125, 131, 1562
PinAI	ACCGGT	1 cut(s)	171
Psp6I	CCWGG	4 cut(s)	310, 986, 1172, 1358
PspGI	CCWGG	4 cut(s)	310, 986, 1172, 1358
PspN4I	GGNNCC	6 cut(s)	91, 616, 985, 1171, 1357, 1582
PstI	CTGCAG	1 cut(s)	1579
PsuI	RGATCY	1 cut(s)	496
PvuII	CAGCTG	1 cut(s)	696
RsaI	GTAC	4 cut(s)	340, 870, 1056, 1242
RsaNI	GTAC	4 cut(s)	339, 869, 1055, 1241
RseI	CAYNNNNRTG	3 cut(s)	84, 639, 1377
SaqAI	TTAA	3 cut(s)	935, 1121, 1307
Sau3AI	GATC	5 cut(s)	217, 234, 271, 496, 1509
ScrFI	CCNGG	4 cut(s)	312, 988, 1174, 1360
SduI	GDGCHC	2 cut(s)	19, 617
SfaNI	GCATC	8 cut(s)	634, 827, 985, 1013, 1171, 1199, 1357, 1483
SfcI	CTRYAG	2 cut(s)	710, 1575
SfiI	GGCCNNNNNGGCC	3 cut(s)	897, 1083, 1269
Sfr274I	CTCGAG	1 cut(s)	648
SfuI	TTCGAA	1 cut(s)	96
SlaI	CTCGAG	1 cut(s)	648
SmiMI	CAYNNNNRTG	3 cut(s)	84, 639, 1377
SmlI	CTYRAG	1 cut(s)	648
SmoI	CTYRAG	1 cut(s)	648
SphI	GCATGC	2 cut(s)	1004, 1190
Sse9I	AATT	7 cut(s)	540, 729, 849, 1035, 1221, 1459, 1567
SseBI	AGGCCT	3 cut(s)	946, 1132, 1318
SspMI	CTAG	4 cut(s)	143, 179, 189, 390
StuI	AGGCCT	3 cut(s)	946, 1132, 1318
StyD4I	CCNGG	4 cut(s)	310, 986, 1172, 1358
StyI	CCWWGG	1 cut(s)	26
TaaI	ACNGT	7 cut(s)	205, 343, 719, 766, 896, 1082, 1268
TaiI	ACGT	4 cut(s)	457, 916, 1102, 1288
TaqI	TCGA	5 cut(s)	96, 649, 733, 1456, 1477
TaqII	GACCGA	1 cut(s)	227
TasI	AATT	7 cut(s)	540, 729, 849, 1035, 1221, 1459, 1567
TatI	WGTACW	1 cut(s)	338
TauI	GCSGC	2 cut(s)	60, 158
TfiI	GAWTC	3 cut(s)	125, 131, 1562
Tru1I	TTAA	3 cut(s)	935, 1121, 1307
Tru9I	TTAA	3 cut(s)	935, 1121, 1307
TscAI	CASTG	2 cut(s)	410, 1454
TseFI	GTSAC	2 cut(s)	174, 719
TseI	GCWGC	8 cut(s)	304, 307, 400, 693, 906, 1092, 1278, 1574
Tsp45I	GTSAC	2 cut(s)	174, 719
TspDTI	ATGAA	4 cut(s)	179, 495, 500, 623
TspRI	CASTG	2 cut(s)	410, 1454
XapI	RAATTY	1 cut(s)	1567
XceI	RCATGY	2 cut(s)	1004, 1190
XcmI	CCANNNNNNNNNTGG	3 cut(s)	899, 1085, 1271
XhoI	CTCGAG	1 cut(s)	648
XspI	CTAG	4 cut(s)	143, 179, 189, 390
Zsp2I	ATGCAT	2 cut(s)	1006, 1192

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.