Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0012634

Physical Location & Seq

Genomic Coordinates Forward (+)

4096843 .. 4103547

Gene Structure 6705 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG059300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGTTTAAGCCGTCTGTCTTCTCTCGAAATTACAAGCCTGACACTTCAGGTAGGAAAATCGTTGATAGAGAACCACTTGTTCAGGGTTTAGTACCTGGTGGAGGGTGTCACCAATGTGTCATTTGTCCGGTGAATTCCTGCATGGTTGCCGAAATTTTAGACGAAAGGAATCAGAACTGGTTTGTACGGGCGAAAGTTGAAAATGATTTGATCATACAAGTTGGAGATTCCAGCTTTCACTTGCACAAGCTCCCGATGGTCATGAGAAGTGGATACTTGAACAGACTAGTATTCAAGACAAGTAATGTTGAGAGAGGTACCTGCCTCAAAATCCGCATAGACAATCTTCCAGGTGGAAACAAAATTTTTGAGTTAGTAGTCAAGTTTTGTTATGGTCGGAAGGTTGATCTAACAGCTGACAATATCGCTCCACTGTATTGTGCTGCACATTTCTTGGAAATGAGTGATGATTTTGAAGAAGGAAATCTCATGTCCAAAACTGAGGAATTTCTAAGCTTTTTGATATTTTCATCATGGAAAGACACTTTCCGGATTTTGAGAAGCTGTGAATCCATTTCTTCCTGGGCAAAAGATTATAAAATCACAAAACGAAGCTCAGAAGCCATTGCTTGGAAGGCCTGCACAAACCTCAAGGCATTTAGTCATGAAGATGATGATATGCAGTGCTTCAGTGTTCTGCCAAATTATGTAGAGAACTCAAAAGTTGAAGATGCACTTGACAATTGGTGGTTTGAAGATGTTTCATCCCTACGAGTAGATCATTTCATCGAAGTGGTTCAATCCCTAAAATGTCAAGGGATGAGAGCAGACCTTGTTGGATCATGTATGGCTCATTGGACTGTTAAATGGCTTTCAAGAATCACCTCTGGACTTGAAAGTATGACCCCCACGCATATGACCCGCCAATATGTAAGAGTTACAACCGAGTGCTTGATTAAGGTACTGCCTGCAGAGGAGAAATCAGTTACTTGTAATTTTATACTTCACCTTCTGAAGATAGGGTTCGTGACAAAAATAAACTCTGATTTACTGAATCTGCTTGAAAGAAGAATAGCTTTCATGTTGGATCAATGTCGTCCTCTAGATCTCTTGGTTAGGAACTATGGAGATAAAGATAGTGTCTATGATGTGAATCTTGTTATAAGAGAGGTAATGGCTTATGTTTCTATTGTTTCAAAAAGTCCCACACCAAAAATGTTTGCTGTTGGAAGGTTGGTGGATGGGTATCTTACACTGGTTGCAAGGGATGAGAACCTTAAGATGAATATTTTCCAGTCACTTGTAGAAGCATTGCCTAGAGATGCTCGTTTTTGCGACGACAATCTCTATAGAGCCATTGACATGTACCTCAAGGCACACCCTAGCTTAACAGAAGAAGAAAGAATGACTCTGTGTGGATCCTTGGAATATCACAGACTGTCCGAAGAAGCTCGTGAGCATGTAACAAAGAATGATCGGTTGCCCGTGAAGATTACAGCACGAGAGAGGAATAAAAACTTCTCCGTGCTGGAAAAGCAGAACATGGCACAGGAGCAAGAGTTGAATGCGTGCAGCTCTTCTGCTTCTCCATCATCAGAGGATTCGAATCCTTGTCCCATCTGCCTCGCACCCATCTTTCGACTTTCTTATCTTGACAAATGTTTACATAAGTTCTGTTACAAATGCATATTACAATGGACTAAAGTTGTAGCTAGCAAGCAGTCTGACCCATCTTCCTCCGTAAAGTGTCCTTTGTGCAAGACAGATAATTTTTCGATTATACATGGATATGATGGATGTTCGTTTCAAAAGCATTACATCAACCAGGATTCAGGGGATTGCTTTGTCTTATCAAGCGCTCACAAGTATAGGTTACAGTGCTATTATACTGAACCAGGTTTCTTAGTTGACATCTTTGATGTAGCACGGTATTGGAAATCCTTTAAGTATCTTCAGCCAAACTGTTGGCTTCAAAGTTGGCTGAGACGGGAAATCCAAGCTCTTATACAGGTTTGTAGTCCTTGCATGAATTTTCTTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009987 GO:0016020 GO:0016567 GO:0019538 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0070647 GO:0071704 GO:0071944 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

680

Amino Acids

78.23

Weight (kDa)

7.4

Isoelectric Point (pI)

46.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	69 - 156	1.6e-08	BTB/POZ domain
NPH3	PF03000	248 - 484	1.1e-67	NPH3 family
zf-C3HC4	PF00097	538 - 586	1.2e-08	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012634)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g05590 FvH4_6g05590 FvH4_6g05590
malus_domestica	MD04G1207200.v1.1 MD17G1055000.v1.1
prunus_persica	Prupe.6G328100_v2.0.a1
pyrus_communis	pycom04g18330
rosa_chinensis	RchiOBHm_Chr3g0454371
rosa_laevigata	RLG00000025449 RLG00000025456
rosa_multiflora	Rmu_sc0036936.1_g000001
rosa_roxburghii	Rroxscaffold_165G00437190 Rroxscaffold_6G00425160
rosa_rugosa	Rorug02G0654500
rosa_samantha	Rh3AG058500 Rh3BG060300 Rh3CG059300 Rh3DG060700
rosa_wichuraiana	Rw3G004520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	597, 1163
Acc36I	ACCTGC	1 cut(s)	329
Acc65I	GGTACC	1 cut(s)	317
AccB1I	GGYRCC	1 cut(s)	317
AccB7I	CCANNNNNTGG	1 cut(s)	630
AccIII	TCCGGA	1 cut(s)	549
AciI	CCGC	2 cut(s)	334, 922
AclWI	GGATC	4 cut(s)	847, 1095, 1413, 1426
AcsI	RAATTY	5 cut(s)	133, 153, 363, 506, 2029
AcuI	CTGAAG	4 cut(s)	30, 673, 1034, 1937
AfaI	GTAC	5 cut(s)	93, 186, 319, 963, 1367
AfeI	AGCGCT	1 cut(s)	1858
AfiI	CCNNNNNNNGG	2 cut(s)	101, 630
AflII	CTTAAG	1 cut(s)	1277
AflIII	ACRYGT	1 cut(s)	1362
AhlI	ACTAGT	1 cut(s)	286
AjnI	CCWGG	5 cut(s)	94, 349, 581, 1824, 1894
AleI	CACNNNNGTG	1 cut(s)	114
Alw26I	GTCTC	1 cut(s)	1978
AlwI	GGATC	4 cut(s)	847, 1095, 1413, 1426
Aor13HI	TCCGGA	1 cut(s)	549
Aor51HI	AGCGCT	1 cut(s)	1858
AoxI	GGCC	1 cut(s)	636
ApeKI	GCWGC	2 cut(s)	443, 1572
ApoI	RAATTY	5 cut(s)	133, 153, 363, 506, 2029
Asp700I	GAANNNNTTC	2 cut(s)	795, 1289
Asp718I	GGTACC	1 cut(s)	317
AspLEI	GCGC	1 cut(s)	1859
AsuHPI	GGTGA	4 cut(s)	101, 142, 874, 998
AsuII	TTCGAA	1 cut(s)	1604
AsuNHI	GCTAGC	1 cut(s)	1712
BamHI	GGATCC	1 cut(s)	1418
BanI	GGYRCC	1 cut(s)	317
BauI	CACGAG	2 cut(s)	1452, 1500
BbsI	GAAGAC	1 cut(s)	10
BbvI	GCAGC	2 cut(s)	430, 1584
BccI	CCATC	7 cut(s)	250, 1235, 1597, 1625, 1640, 1738, 1787
BciT130I	CCWGG	5 cut(s)	96, 351, 583, 1826, 1896
BciVI	GTATCC	1 cut(s)	266
BclI	TGATCA	1 cut(s)	210
BcoDI	GTCTC	1 cut(s)	1978
BcuI	ACTAGT	1 cut(s)	286
BfaI	CTAG	5 cut(s)	287, 1103, 1317, 1383, 1713
BfmI	CTRYAG	2 cut(s)	969, 1348
BfoI	RGCGCY	1 cut(s)	1860
BfrI	CTTAAG	1 cut(s)	1277
BfuAI	ACCTGC	1 cut(s)	329
BfuI	GTATCC	1 cut(s)	266
BglII	AGATCT	1 cut(s)	1105
BisI	GCNGC	2 cut(s)	444, 1573
BlsI	GCNGC	2 cut(s)	445, 1574
Bme1390I	CCNGG	5 cut(s)	96, 351, 583, 1826, 1896
BmiI	GGNNCC	2 cut(s)	319, 1420
BmrFI	CCNGG	5 cut(s)	96, 351, 583, 1826, 1896
BmsI	GCATC	2 cut(s)	721, 1312
BmtI	GCTAGC	1 cut(s)	1716
BpiI	GAAGAC	1 cut(s)	10
Bpu14I	TTCGAA	1 cut(s)	1604
BpuEI	CTTGAG	2 cut(s)	635, 1355
BsaBI	GATNNNNATC	3 cut(s)	1152, 1245, 1605
BsaJI	CCNNGG	2 cut(s)	582, 1422
BsaWI	WCCGGW	2 cut(s)	127, 549
BsaXI	ACNNNNNCTCC	2 cut(s)	1544, 1574
Bsc4I	CCNNNNNNNGG	2 cut(s)	101, 630
Bse1I	ACTGG	3 cut(s)	182, 1260, 1294
Bse3DI	GCAATG	2 cut(s)	624, 1310
Bse8I	GATNNNNATC	3 cut(s)	1152, 1245, 1605
BseAI	TCCGGA	1 cut(s)	549
BseBI	CCWGG	5 cut(s)	96, 351, 583, 1826, 1896
BseDI	CCNNGG	2 cut(s)	582, 1422
BseGI	GGATG	5 cut(s)	764, 825, 1246, 1273, 1802
BseJI	GATNNNNATC	3 cut(s)	1152, 1245, 1605
BseLI	CCNNNNNNNGG	2 cut(s)	101, 630
BseMI	GCAATG	2 cut(s)	624, 1310
BseMII	CTCAG	3 cut(s)	492, 630, 1973
BseNI	ACTGG	3 cut(s)	182, 1260, 1294
BseRI	GAGGAG	1 cut(s)	989
BseXI	GCAGC	2 cut(s)	430, 1584
BsgI	GTGCAG	3 cut(s)	429, 625, 1591
BshFI	GGCC	1 cut(s)	638
BshNI	GGYRCC	1 cut(s)	317
BsiSI	CCGG	2 cut(s)	128, 550
BslFI	GGGAC	2 cut(s)	1188, 1599
BslI	CCNNNNNNNGG	2 cut(s)	101, 630
BsmAI	GTCTC	1 cut(s)	1978
BsmBI	CGTCTC	1 cut(s)	1978
BsmFI	GGGAC	2 cut(s)	1188, 1599
BsmI	GAATGC	1 cut(s)	1570
BsnI	GGCC	1 cut(s)	638
Bsp119I	TTCGAA	1 cut(s)	1604
Bsp13I	TCCGGA	1 cut(s)	549
Bsp143I	GATC	8 cut(s)	210, 406, 778, 839, 1087, 1105, 1418, 1474
BspACI	CCGC	2 cut(s)	334, 922
BspANI	GGCC	1 cut(s)	638
BspCNI	CTCAG	3 cut(s)	493, 629, 1974
BspEI	TCCGGA	1 cut(s)	549
BspHI	TCATGA	2 cut(s)	261, 664
BspLI	GGNNCC	2 cut(s)	319, 1420
BspMAI	CTGCAG	1 cut(s)	973
BspMI	ACCTGC	1 cut(s)	329
BspOI	GCTAGC	1 cut(s)	1716
BspPI	GGATC	4 cut(s)	847, 1095, 1413, 1426
BspQI	GCTCTTC	1 cut(s)	1582
BspT104I	TTCGAA	1 cut(s)	1604
BspT107I	GGYRCC	1 cut(s)	317
BspTI	CTTAAG	1 cut(s)	1277
BsrDI	GCAATG	2 cut(s)	624, 1310
BsrI	ACTGG	3 cut(s)	182, 1260, 1294
BssECI	CCNNGG	2 cut(s)	582, 1422
BssMI	GATC	8 cut(s)	210, 406, 778, 839, 1087, 1105, 1418, 1474
BssSI	CACGAG	2 cut(s)	1452, 1500
BssT1I	CCWWGG	1 cut(s)	1422
Bst2BI	CACGAG	2 cut(s)	1452, 1500
Bst2UI	CCWGG	5 cut(s)	96, 351, 583, 1826, 1896
Bst4CI	ACNGT	6 cut(s)	435, 862, 1440, 1878, 1929, 1964
Bst6I	CTCTTC	1 cut(s)	1582
BstAFI	CTTAAG	1 cut(s)	1277
BstBI	TTCGAA	1 cut(s)	1604
BstC8I	GCNNGC	5 cut(s)	640, 969, 1570, 1714, 1718
BstDEI	CTNAG	5 cut(s)	501, 512, 616, 1903, 1982
BstENI	CCTNNNNNAGG	1 cut(s)	99
BstF5I	GGATG	5 cut(s)	764, 825, 1246, 1273, 1802
BstH2I	RGCGCY	1 cut(s)	1860
BstHHI	GCGC	1 cut(s)	1859
BstKTI	GATC	8 cut(s)	213, 409, 781, 842, 1090, 1108, 1421, 1477
BstMAI	GTCTC	1 cut(s)	1978
BstMBI	GATC	8 cut(s)	210, 406, 778, 839, 1087, 1105, 1418, 1474
BstMWI	GCNNNNNNNGC	2 cut(s)	635, 1534
BstNI	CCWGG	5 cut(s)	96, 351, 583, 1826, 1896
BstNSI	RCATGY	2 cut(s)	1366, 1463
BstSCI	CCNGG	5 cut(s)	94, 349, 581, 1824, 1894
BstSFI	CTRYAG	2 cut(s)	969, 1348
BstV1I	GCAGC	2 cut(s)	430, 1584
BstV2I	GAAGAC	1 cut(s)	10
BstX2I	RGATCY	2 cut(s)	1105, 1418
BstXI	CCANNNNNNTGG	1 cut(s)	1965
BstYI	RGATCY	2 cut(s)	1105, 1418
BsuI	GTATCC	1 cut(s)	266
BsuRI	GGCC	1 cut(s)	638
BtsCI	GGATG	5 cut(s)	764, 825, 1246, 1273, 1802
BtsI	GCAGTG	1 cut(s)	689
BtsIMutI	CAGTG	5 cut(s)	431, 689, 697, 1253, 1883
BveI	ACCTGC	1 cut(s)	329
Cac8I	GCNNGC	5 cut(s)	640, 969, 1570, 1714, 1718
CciI	TCATGA	2 cut(s)	261, 664
CfoI	GCGC	1 cut(s)	1859
CsiI	ACCWGGT	2 cut(s)	94, 1894
Csp6I	GTAC	5 cut(s)	92, 185, 318, 962, 1366
CviQI	GTAC	5 cut(s)	92, 185, 318, 962, 1366
DdeI	CTNAG	5 cut(s)	501, 512, 616, 1903, 1982
DpnI	GATC	8 cut(s)	212, 408, 780, 841, 1089, 1107, 1420, 1476
DpnII	GATC	8 cut(s)	210, 406, 778, 839, 1087, 1105, 1418, 1474
Eam1104I	CTCTTC	1 cut(s)	1582
EarI	CTCTTC	1 cut(s)	1582
Eco130I	CCWWGG	1 cut(s)	1422
Eco147I	AGGCCT	1 cut(s)	638
Eco47III	AGCGCT	1 cut(s)	1858
Eco57I	CTGAAG	4 cut(s)	30, 673, 1034, 1937
EcoNI	CCTNNNNNAGG	1 cut(s)	99
EcoRI	GAATTC	1 cut(s)	133
EcoRII	CCWGG	5 cut(s)	94, 349, 581, 1824, 1894
EcoT14I	CCWWGG	1 cut(s)	1422
EcoT22I	ATGCAT	1 cut(s)	1688
ErhI	CCWWGG	1 cut(s)	1422
Esp3I	CGTCTC	1 cut(s)	1978
FalI	AAGNNNNNCTT	4 cut(s)	720, 752, 1060, 1092
FaqI	GGGAC	2 cut(s)	1188, 1599
FauI	CCCGC	1 cut(s)	929
FauNDI	CATATG	1 cut(s)	915
FbaI	TGATCA	1 cut(s)	210
Fnu4HI	GCNGC	2 cut(s)	444, 1573
FokI	GGATG	5 cut(s)	751, 832, 1253, 1280, 1809
Fsp4HI	GCNGC	2 cut(s)	444, 1573
FspBI	CTAG	5 cut(s)	287, 1103, 1317, 1383, 1713
GlaI	GCGC	1 cut(s)	1858
GluI	GCNGC	2 cut(s)	444, 1573
HaeII	RGCGCY	1 cut(s)	1860
HaeIII	GGCC	1 cut(s)	638
HapII	CCGG	2 cut(s)	128, 550
HhaI	GCGC	1 cut(s)	1859
Hin6I	GCGC	1 cut(s)	1857
HinP1I	GCGC	1 cut(s)	1857
HincII	GTYRAC	1 cut(s)	1909
HindII	GTYRAC	1 cut(s)	1909
HindIII	AAGCTT	1 cut(s)	514
HpaII	CCGG	2 cut(s)	128, 550
HphI	GGTGA	4 cut(s)	101, 142, 874, 998
Hpy166II	GTNNAC	2 cut(s)	1664, 1909
Hpy188I	TCNGA	8 cut(s)	174, 399, 619, 1014, 1045, 1444, 1597, 1726
Hpy8I	GTNNAC	2 cut(s)	1664, 1909
Hpy99I	CGWCG	1 cut(s)	1340
HpyAV	CCTTC	5 cut(s)	394, 473, 628, 1019, 1224
HpyCH4III	ACNGT	6 cut(s)	435, 862, 1440, 1878, 1929, 1964
HpyF10VI	GCNNNNNNNGC	2 cut(s)	635, 1534
HpyF3I	CTNAG	5 cut(s)	501, 512, 616, 1903, 1982
HspAI	GCGC	1 cut(s)	1857
Kpn2I	TCCGGA	1 cut(s)	549
KpnI	GGTACC	1 cut(s)	321
Ksp22I	TGATCA	1 cut(s)	210
Kzo9I	GATC	8 cut(s)	210, 406, 778, 839, 1087, 1105, 1418, 1474
LguI	GCTCTTC	1 cut(s)	1582
LmnI	GCTCC	3 cut(s)	255, 433, 1552
Lsp1109I	GCAGC	2 cut(s)	430, 1584
LweI	GCATC	2 cut(s)	721, 1312
MabI	ACCWGGT	2 cut(s)	94, 1894
MaeI	CTAG	5 cut(s)	287, 1103, 1317, 1383, 1713
MaeIII	GTNAC	8 cut(s)	107, 937, 985, 1027, 1296, 1462, 1676, 1872
MalI	GATC	8 cut(s)	212, 408, 780, 841, 1089, 1107, 1420, 1476
MboI	GATC	8 cut(s)	210, 406, 778, 839, 1087, 1105, 1418, 1474
MfeI	CAATTG	1 cut(s)	742
MflI	RGATCY	2 cut(s)	1105, 1418
MlyI	GAGTC	1 cut(s)	1402
MmeI	TCCRAC	5 cut(s)	202, 377, 817, 1065, 1207
Mph1103I	ATGCAT	1 cut(s)	1688
MroI	TCCGGA	1 cut(s)	549
MroXI	GAANNNNTTC	2 cut(s)	795, 1289
MseI	TTAA	6 cut(s)	6, 864, 957, 1278, 1388, 1944
MslI	CAYNNNNRTG	6 cut(s)	114, 669, 791, 914, 1361, 1788
MspA1I	CMGCKG	1 cut(s)	416
MspCI	CTTAAG	1 cut(s)	1277
MspI	CCGG	2 cut(s)	128, 550
MspR9I	CCNGG	5 cut(s)	96, 351, 583, 1826, 1896
MunI	CAATTG	1 cut(s)	742
Mva1269I	GAATGC	1 cut(s)	1570
MvaI	CCWGG	5 cut(s)	96, 351, 583, 1826, 1896
MwoI	GCNNNNNNNGC	2 cut(s)	635, 1534
NdeI	CATATG	1 cut(s)	915
NdeII	GATC	8 cut(s)	210, 406, 778, 839, 1087, 1105, 1418, 1474
NheI	GCTAGC	1 cut(s)	1712
NlaIV	GGNNCC	2 cut(s)	319, 1420
NmuCI	GTSAC	3 cut(s)	107, 1027, 1296
NsiI	ATGCAT	1 cut(s)	1688
NspI	RCATGY	2 cut(s)	1366, 1463
NspV	TTCGAA	1 cut(s)	1604
OliI	CACNNNNGTG	1 cut(s)	114
PagI	TCATGA	2 cut(s)	261, 664
PceI	AGGCCT	1 cut(s)	638
PciI	ACATGT	1 cut(s)	1362
PciSI	GCTCTTC	1 cut(s)	1582
PctI	GAATGC	1 cut(s)	1570
PdmI	GAANNNNTTC	2 cut(s)	795, 1289
PfeI	GAWTC	9 cut(s)	169, 227, 569, 879, 1054, 1153, 1601, 1606, 1829
PflMI	CCANNNNNTGG	1 cut(s)	630
PkrI	GCNGC	2 cut(s)	445, 1574
PleI	GAGTC	1 cut(s)	1402
PpsI	GAGTC	1 cut(s)	1402
PscI	ACATGT	1 cut(s)	1362
PsiI	TTATAA	2 cut(s)	597, 1163
Psp6I	CCWGG	5 cut(s)	94, 349, 581, 1824, 1894
PspGI	CCWGG	5 cut(s)	94, 349, 581, 1824, 1894
PspN4I	GGNNCC	2 cut(s)	319, 1420
PstI	CTGCAG	1 cut(s)	973
PsuI	RGATCY	2 cut(s)	1105, 1418
PvuII	CAGCTG	1 cut(s)	416
RsaI	GTAC	5 cut(s)	93, 186, 319, 963, 1367
RsaNI	GTAC	5 cut(s)	92, 185, 318, 962, 1366
RseI	CAYNNNNRTG	6 cut(s)	114, 669, 791, 914, 1361, 1788
SapI	GCTCTTC	1 cut(s)	1582
SaqAI	TTAA	6 cut(s)	6, 864, 957, 1278, 1388, 1944
SatI	GCNGC	2 cut(s)	444, 1573
Sau3AI	GATC	8 cut(s)	210, 406, 778, 839, 1087, 1105, 1418, 1474
SchI	GAGTC	1 cut(s)	1402
ScrFI	CCNGG	5 cut(s)	96, 351, 583, 1826, 1896
SexAI	ACCWGGT	2 cut(s)	94, 1894
SfaNI	GCATC	2 cut(s)	721, 1312
SfcI	CTRYAG	2 cut(s)	969, 1348
SfuI	TTCGAA	1 cut(s)	1604
SmiMI	CAYNNNNRTG	6 cut(s)	114, 669, 791, 914, 1361, 1788
SmlI	CTYRAG	3 cut(s)	650, 1277, 1370
SmoI	CTYRAG	3 cut(s)	650, 1277, 1370
SpeI	ACTAGT	1 cut(s)	286
SseBI	AGGCCT	1 cut(s)	638
SsiI	CCGC	2 cut(s)	334, 922
SspI	AATATT	1 cut(s)	1288
SspMI	CTAG	5 cut(s)	287, 1103, 1317, 1383, 1713
StuI	AGGCCT	1 cut(s)	638
StyD4I	CCNGG	5 cut(s)	94, 349, 581, 1824, 1894
StyI	CCWWGG	1 cut(s)	1422
TaaI	ACNGT	6 cut(s)	435, 862, 1440, 1878, 1929, 1964
TaqI	TCGA	5 cut(s)	25, 789, 1604, 1639, 1775
TfiI	GAWTC	9 cut(s)	169, 227, 569, 879, 1054, 1153, 1601, 1606, 1829
Tru1I	TTAA	6 cut(s)	6, 864, 957, 1278, 1388, 1944
Tru9I	TTAA	6 cut(s)	6, 864, 957, 1278, 1388, 1944
TscAI	CASTG	5 cut(s)	438, 689, 697, 1260, 1883
TseFI	GTSAC	3 cut(s)	107, 1027, 1296
TseI	GCWGC	2 cut(s)	443, 1572
Tsp45I	GTSAC	3 cut(s)	107, 1027, 1296
TspDTI	ATGAA	7 cut(s)	519, 681, 753, 775, 1069, 1298, 2042
TspGWI	ACGGA	2 cut(s)	1513, 1729
TspRI	CASTG	5 cut(s)	438, 689, 697, 1260, 1883
Van91I	CCANNNNNTGG	1 cut(s)	630
Vha464I	CTTAAG	1 cut(s)	1277
XagI	CCTNNNNNAGG	1 cut(s)	99
XapI	RAATTY	5 cut(s)	133, 153, 363, 506, 2029
XbaI	TCTAGA	1 cut(s)	1102
XceI	RCATGY	2 cut(s)	1366, 1463
XmnI	GAANNNNTTC	2 cut(s)	795, 1289
XspI	CTAG	5 cut(s)	287, 1103, 1317, 1383, 1713
Zsp2I	ATGCAT	1 cut(s)	1688

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.