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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000556.1_g000030 Rmu_sc0000982.1_g000069 Rmu_sc0001214.1_g000026 Rmu_sc0005278.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00148240 Rroxscaffold_4G00322620 |
| rosa_samantha | Rh1AG040000 Rh1CG040900 Rh3CG126800 Rh4DG032300 Rh7DG296000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 183 |
| AcsI | RAATTY | 2 cut(s) | 7, 85 |
| AcuI | CTGAAG | 1 cut(s) | 246 |
| AcyI | GRCGYC | 2 cut(s) | 171, 180 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 96 |
| AgsI | TTSAA | 1 cut(s) | 13 |
| Alw26I | GTCTC | 1 cut(s) | 251 |
| ApoI | RAATTY | 2 cut(s) | 7, 85 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 202 |
| AspS9I | GGNCC | 1 cut(s) | 60 |
| AsuC2I | CCSGG | 1 cut(s) | 97 |
| AsuHPI | GGTGA | 2 cut(s) | 106, 393 |
| AvaII | GGWCC | 1 cut(s) | 60 |
| BcnI | CCSGG | 1 cut(s) | 97 |
| BcoDI | GTCTC | 1 cut(s) | 251 |
| BfaI | CTAG | 1 cut(s) | 42 |
| Bme1390I | CCNGG | 1 cut(s) | 97 |
| Bme18I | GGWCC | 1 cut(s) | 60 |
| BmgT120I | GGNCC | 1 cut(s) | 60 |
| BmrFI | CCNGG | 1 cut(s) | 97 |
| BmsI | GCATC | 1 cut(s) | 133 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 277, 309 |
| BpmI | CTGGAG | 1 cut(s) | 350 |
| BpuMI | CCSGG | 1 cut(s) | 97 |
| BsaHI | GRCGYC | 2 cut(s) | 171, 180 |
| BsaWI | WCCGGW | 1 cut(s) | 116 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 96 |
| Bse1I | ACTGG | 2 cut(s) | 90, 333 |
| BseGI | GGATG | 1 cut(s) | 277 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BseNI | ACTGG | 2 cut(s) | 90, 333 |
| BseRI | GAGGAG | 1 cut(s) | 343 |
| BseYI | CCCAGC | 1 cut(s) | 218 |
| Bsh1285I | CGRYCG | 1 cut(s) | 366 |
| BsiEI | CGRYCG | 1 cut(s) | 366 |
| BsiSI | CCGG | 2 cut(s) | 97, 117 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BsmAI | GTCTC | 1 cut(s) | 251 |
| Bsp143I | GATC | 3 cut(s) | 64, 348, 363 |
| BsrI | ACTGG | 2 cut(s) | 90, 333 |
| BssMI | GATC | 3 cut(s) | 64, 348, 363 |
| BssNI | GRCGYC | 2 cut(s) | 171, 180 |
| BstACI | GRCGYC | 2 cut(s) | 171, 180 |
| BstF5I | GGATG | 1 cut(s) | 277 |
| BstKTI | GATC | 3 cut(s) | 67, 351, 366 |
| BstMAI | GTCTC | 1 cut(s) | 251 |
| BstMBI | GATC | 3 cut(s) | 64, 348, 363 |
| BstMCI | CGRYCG | 1 cut(s) | 366 |
| BstSCI | CCNGG | 1 cut(s) | 95 |
| BtgZI | GCGATG | 1 cut(s) | 172 |
| BtsCI | GGATG | 1 cut(s) | 277 |
| Cfr13I | GGNCC | 1 cut(s) | 60 |
| CseI | GACGC | 1 cut(s) | 179 |
| CviJI | RGCY | 1 cut(s) | 222 |
| CviKI_1 | RGCY | 1 cut(s) | 222 |
| DpnI | GATC | 3 cut(s) | 66, 350, 365 |
| DpnII | GATC | 3 cut(s) | 64, 348, 363 |
| Eco47I | GGWCC | 1 cut(s) | 60 |
| Eco57I | CTGAAG | 1 cut(s) | 246 |
| EcoRI | GAATTC | 1 cut(s) | 85 |
| FaiI | YATR | 1 cut(s) | 75 |
| FokI | GGATG | 1 cut(s) | 284 |
| FspBI | CTAG | 1 cut(s) | 42 |
| GsaI | CCCAGC | 1 cut(s) | 222 |
| GsuI | CTGGAG | 1 cut(s) | 350 |
| HapII | CCGG | 2 cut(s) | 97, 117 |
| HgaI | GACGC | 1 cut(s) | 179 |
| Hin1I | GRCGYC | 2 cut(s) | 171, 180 |
| HinfI | GANTC | 4 cut(s) | 111, 126, 203, 290 |
| HpaII | CCGG | 2 cut(s) | 97, 117 |
| HphI | GGTGA | 2 cut(s) | 106, 393 |
| Hpy188I | TCNGA | 1 cut(s) | 64 |
| Hpy188III | TCNNGA | 1 cut(s) | 212 |
| Hpy99I | CGWCG | 2 cut(s) | 173, 197 |
| HpyAV | CCTTC | 2 cut(s) | 51, 234 |
| HpyCH4IV | ACGT | 1 cut(s) | 180 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpySE526I | ACGT | 1 cut(s) | 180 |
| Hsp92I | GRCGYC | 2 cut(s) | 171, 180 |
| Kzo9I | GATC | 3 cut(s) | 64, 348, 363 |
| LpnPI | CCDG | 7 cut(s) | 103, 110, 130, 151, 232, 314, 399 |
| LweI | GCATC | 1 cut(s) | 133 |
| MaeI | CTAG | 1 cut(s) | 42 |
| MaeII | ACGT | 1 cut(s) | 180 |
| MaeIII | GTNAC | 4 cut(s) | 112, 131, 367, 399 |
| MalI | GATC | 3 cut(s) | 66, 350, 365 |
| MboI | GATC | 3 cut(s) | 64, 348, 363 |
| MboII | GAAGA | 2 cut(s) | 112, 219 |
| MluCI | AATT | 4 cut(s) | 7, 18, 85, 415 |
| MlyI | GAGTC | 1 cut(s) | 120 |
| MnlI | CCTC | 2 cut(s) | 262, 364 |
| MroXI | GAANNNNTTC | 1 cut(s) | 202 |
| MseI | TTAA | 3 cut(s) | 122, 242, 418 |
| MspI | CCGG | 2 cut(s) | 97, 117 |
| MspR9I | CCNGG | 1 cut(s) | 97 |
| NciI | CCSGG | 1 cut(s) | 97 |
| NdeII | GATC | 3 cut(s) | 64, 348, 363 |
| NmuCI | GTSAC | 2 cut(s) | 112, 399 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 177 |
| PdmI | GAANNNNTTC | 1 cut(s) | 202 |
| PfeI | GAWTC | 3 cut(s) | 126, 203, 290 |
| PfoI | TCCNGGA | 1 cut(s) | 95 |
| Ple19I | CGATCG | 1 cut(s) | 366 |
| PleI | GAGTC | 1 cut(s) | 119 |
| PpsI | GAGTC | 1 cut(s) | 119 |
| PspFI | CCCAGC | 1 cut(s) | 218 |
| PspPI | GGNCC | 1 cut(s) | 60 |
| PvuI | CGATCG | 1 cut(s) | 366 |
| SaqAI | TTAA | 3 cut(s) | 122, 242, 418 |
| Sau3AI | GATC | 3 cut(s) | 64, 348, 363 |
| Sau96I | GGNCC | 1 cut(s) | 60 |
| SchI | GAGTC | 1 cut(s) | 120 |
| ScrFI | CCNGG | 1 cut(s) | 97 |
| SetI | ASST | 2 cut(s) | 62, 183 |
| SfaNI | GCATC | 1 cut(s) | 133 |
| SinI | GGWCC | 1 cut(s) | 60 |
| Sse9I | AATT | 4 cut(s) | 7, 18, 85, 415 |
| SspMI | CTAG | 1 cut(s) | 42 |
| StyD4I | CCNGG | 1 cut(s) | 95 |
| TaiI | ACGT | 1 cut(s) | 183 |
| TaqI | TCGA | 3 cut(s) | 168, 347, 362 |
| TasI | AATT | 4 cut(s) | 7, 18, 85, 415 |
| TfiI | GAWTC | 3 cut(s) | 126, 203, 290 |
| Tru1I | TTAA | 3 cut(s) | 122, 242, 418 |
| Tru9I | TTAA | 3 cut(s) | 122, 242, 418 |
| TseFI | GTSAC | 2 cut(s) | 112, 399 |
| Tsp45I | GTSAC | 2 cut(s) | 112, 399 |
| TspGWI | ACGGA | 2 cut(s) | 210, 335 |
| VpaK11BI | GGWCC | 1 cut(s) | 60 |
| XapI | RAATTY | 2 cut(s) | 7, 85 |
| XmnI | GAANNNNTTC | 1 cut(s) | 202 |
| XspI | CTAG | 1 cut(s) | 42 |
| ZraI | GACGTC | 1 cut(s) | 181 |