Rh3CG272900

Guanylate kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0004677
Physical Location & Seq
Reverse (-)
27097871 .. 27103107
5237 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG272900.1

Sequence Viewer

Length: 951 bp
ATGAGTGGAGATCGAATATTGATTATTAAGAGTGGTTCAAATTCAGATGATTTCGCCTGGTTTCTTGAGGTGGACACCCAATATGTTAGGCAGAAGAAGAAAATTTTAGGCACAGAGGTTGTTGCTTGGAGTAGGGGTGTGAGAGGCAGTGCTGAGAAGCCAGTAGTTATTAGTGGTCCTTCTGGGGTAGGTAAGGGGACACTAATATCAATGCTCACGAAAGAATATCCATCCCTGTTTGGATTATCTGTGAGCCACACGACTCGTGCTCCAAGAGCTATGGAGAAGGATGGGGTTCATTATCATTTCATCGAGCGAAGTGCAATGGAGAAAGAGATAGAAGATGGGAAATTCCTTGAGTTTGCTTCTGTGCACGGAAATCTCTATGGAACTAGTGTTGAAGCAGTAGAAGCGGTAGCAGATGCTGGAAAGATATGCATTCTTGACATTGATGTTCAAGGGGCAAGATCAGTGAGGGCTACTTCGCTTGAAGCTCTCTTTATCTTTGTGTGTCCTCCCTCGATGGAGGAGCTTGAGAAGCGCCTTCGTGCAAGGGGAACCGAGACAGAGGAACAGGTCCTAAAGAGACTTCGAAATGCCAAGTCAGAGATTGAGCAGGGGAAATCATCAGGCATCTTTAATCATATGTTGTATAATGATAATCTTGAAGATTGTTACAAGAGTCTTAAGGAACTTTTGGGGCTGGATGAAAGTATGCCTGCTCCTAAATCATCATCTAAAGTGGTTGATCTGTTTATCGACCATTCTGTTTCCAAGATTGACAACAAAATCATCATAAACTCCAGAAACCCAGAACTGGAAAAGTCATCGACCAACATGATTGTGCTTGATGTGTCATCCCTCAAGGGAGGAGCGCCTGGAAGGACAAGAGGACTGAACATCTATACAATGGACTCAATTTTGGATGGTTTGGCTGGGATCCCACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006163 GO:0006164 GO:0006185 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009126 GO:0009132 GO:0009133 GO:0009135 GO:0009136 GO:0009141 GO:0009144 GO:0009150 GO:0009151 GO:0009152 GO:0009153 GO:0009161 GO:0009162 GO:0009163 GO:0009165 GO:0009167 GO:0009170 GO:0009179 GO:0009180 GO:0009182 GO:0009183 GO:0009185 GO:0009186 GO:0009188 GO:0009189 GO:0009199 GO:0009200 GO:0009205 GO:0009215 GO:0009225 GO:0009259 GO:0009260 GO:0009262 GO:0009263 GO:0009265 GO:0009394 GO:0009987 GO:0015031 GO:0015833 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0017144 GO:0018130 GO:0019205 GO:0019438 GO:0019637 GO:0019673 GO:0019692 GO:0019693 GO:0032501 GO:0032502 GO:0033036 GO:0034404 GO:0034436 GO:0034641 GO:0034654 GO:0040008 GO:0042278 GO:0042451 GO:0042455 GO:0042886 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046034 GO:0046037 GO:0046054 GO:0046060 GO:0046066 GO:0046128 GO:0046129 GO:0046385 GO:0046390 GO:0046483 GO:0046710 GO:0046711 GO:0046939 GO:0046940 GO:0048229 GO:0048638 GO:0048856 GO:0050145 GO:0050789 GO:0050793 GO:0051179 GO:0051234 GO:0055086 GO:0065007 GO:0071702 GO:0071704 GO:0071705 GO:0072521 GO:0072522 GO:0090407 GO:1901068 GO:1901070 GO:1901135 GO:1901137 GO:1901264 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 map00230 map01100
Pfam Domains
Protein Families
Guanylate_kin

Protein Analysis

316

Amino Acids

34.71

Weight (kDa)

5.96

Isoelectric Point (pI)

38.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Guanylate_kin PF00625 52 - 233 2.4e-59 Guanylate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 413
AclWI GGATC 2 cut(s) 934, 947
AcsI RAATTY 3 cut(s) 40, 102, 350
AfiI CCNNNNNNNGG 1 cut(s) 817
AflII CTTAAG 1 cut(s) 686
AgsI TTSAA 5 cut(s) 39, 401, 458, 491, 668
AhlI ACTAGT 1 cut(s) 392
AjnI CCWGG 2 cut(s) 56, 877
AluBI AGCT 3 cut(s) 278, 494, 532
AluI AGCT 3 cut(s) 278, 494, 532
Alw21I GWGCWC 2 cut(s) 271, 375
Alw26I GTCTC 2 cut(s) 557, 580
Alw44I GTGCAC 1 cut(s) 371
AlwI GGATC 2 cut(s) 934, 947
AlwNI CAGNNNCTG 1 cut(s) 425
ApaLI GTGCAC 1 cut(s) 371
ApoI RAATTY 3 cut(s) 40, 102, 350
AspLEI GCGC 2 cut(s) 543, 877
AspS9I GGNCC 2 cut(s) 176, 577
AsuII TTCGAA 1 cut(s) 592
AvaII GGWCC 2 cut(s) 176, 577
BaeGI GKGCMC 1 cut(s) 375
BamHI GGATCC 1 cut(s) 939
BauI CACGAG 1 cut(s) 264
Bbv12I GWGCWC 2 cut(s) 271, 375
BccI CCATC 5 cut(s) 238, 284, 338, 517, 920
BcgI CGANNNNNNTGC 2 cut(s) 302, 336
BciT130I CCWGG 2 cut(s) 58, 879
BcoDI GTCTC 2 cut(s) 557, 580
BcuI ACTAGT 1 cut(s) 392
BfaI CTAG 1 cut(s) 393
BfoI RGCGCY 2 cut(s) 544, 878
BfrI CTTAAG 1 cut(s) 686
Bme1390I CCNGG 2 cut(s) 58, 879
Bme18I GGWCC 2 cut(s) 176, 577
BmgT120I GGNCC 2 cut(s) 176, 577
BmiI GGNNCC 2 cut(s) 559, 941
BmrFI CCNGG 2 cut(s) 58, 879
BmsI GCATC 2 cut(s) 412, 642
BpmI CTGGAG 1 cut(s) 787
Bpu14I TTCGAA 1 cut(s) 592
BpuEI CTTGAG 4 cut(s) 86, 377, 554, 848
BsaXI ACNNNNNCTCC 4 cut(s) 121, 151, 253, 283
Bsc4I CCNNNNNNNGG 1 cut(s) 817
Bse1I ACTGG 2 cut(s) 161, 822
Bse3DI GCAATG 1 cut(s) 330
BseBI CCWGG 2 cut(s) 58, 879
BseGI GGATG 5 cut(s) 230, 295, 712, 857, 931
BseLI CCNNNNNNNGG 1 cut(s) 817
BseMI GCAATG 1 cut(s) 330
BseMII CTCAG 1 cut(s) 144
BseNI ACTGG 2 cut(s) 161, 822
BseRI GAGGAG 2 cut(s) 542, 885
BseSI GKGCMC 1 cut(s) 375
BseYI CCCAGC 1 cut(s) 935
BsiHKAI GWGCWC 2 cut(s) 271, 375
BslFI GGGAC 1 cut(s) 211
BslI CCNNNNNNNGG 1 cut(s) 817
BsmAI GTCTC 2 cut(s) 557, 580
BsmFI GGGAC 1 cut(s) 211
BsmI GAATGC 1 cut(s) 438
Bsp119I TTCGAA 1 cut(s) 592
Bsp1286I GDGCHC 2 cut(s) 271, 375
Bsp143I GATC 4 cut(s) 10, 467, 748, 939
BspACI CCGC 1 cut(s) 413
BspCNI CTCAG 1 cut(s) 145
BspLI GGNNCC 2 cut(s) 559, 941
BspPI GGATC 2 cut(s) 934, 947
BspT104I TTCGAA 1 cut(s) 592
BspTI CTTAAG 1 cut(s) 686
BsrDI GCAATG 1 cut(s) 330
BsrI ACTGG 2 cut(s) 161, 822
BssMI GATC 4 cut(s) 10, 467, 748, 939
BssSI CACGAG 1 cut(s) 264
Bst2BI CACGAG 1 cut(s) 264
Bst2UI CCWGG 2 cut(s) 58, 879
BstAFI CTTAAG 1 cut(s) 686
BstBI TTCGAA 1 cut(s) 592
BstC8I GCNNGC 1 cut(s) 720
BstDEI CTNAG 1 cut(s) 153
BstF5I GGATG 5 cut(s) 230, 295, 712, 857, 931
BstH2I RGCGCY 2 cut(s) 544, 878
BstHHI GCGC 2 cut(s) 543, 877
BstKTI GATC 4 cut(s) 13, 470, 751, 942
BstMAI GTCTC 2 cut(s) 557, 580
BstMBI GATC 4 cut(s) 10, 467, 748, 939
BstMWI GCNNNNNNNGC 3 cut(s) 275, 410, 538
BstNI CCWGG 2 cut(s) 58, 879
BstSCI CCNGG 2 cut(s) 56, 877
BstSLI GKGCMC 1 cut(s) 375
BstX2I RGATCY 1 cut(s) 939
BstYI RGATCY 1 cut(s) 939
BtsCI GGATG 5 cut(s) 230, 295, 712, 857, 931
BtsI GCAGTG 1 cut(s) 154
BtsIMutI CAGTG 2 cut(s) 154, 477
Cac8I GCNNGC 1 cut(s) 720
CaiI CAGNNNCTG 1 cut(s) 425
CfoI GCGC 2 cut(s) 543, 877
Cfr13I GGNCC 2 cut(s) 176, 577
CviAII CATG 1 cut(s) 838
CviJI RGCY 8 cut(s) 160, 255, 278, 479, 494, 532, 703, 935
CviKI_1 RGCY 8 cut(s) 160, 255, 278, 479, 494, 532, 703, 935
DdeI CTNAG 1 cut(s) 153
DpnI GATC 4 cut(s) 12, 469, 750, 941
DpnII GATC 4 cut(s) 10, 467, 748, 939
Eco47I GGWCC 2 cut(s) 176, 577
EcoO109I RGGNCCY 1 cut(s) 577
EcoRII CCWGG 2 cut(s) 56, 877
EcoT22I ATGCAT 1 cut(s) 440
FaeI CATG 1 cut(s) 841
FaqI GGGAC 1 cut(s) 211
FatI CATG 1 cut(s) 837
FauNDI CATATG 1 cut(s) 645
FokI GGATG 5 cut(s) 217, 302, 719, 844, 938
FspBI CTAG 1 cut(s) 393
GlaI GCGC 2 cut(s) 542, 876
GsaI CCCAGC 1 cut(s) 939
GsuI CTGGAG 1 cut(s) 787
HaeII RGCGCY 2 cut(s) 544, 878
HhaI GCGC 2 cut(s) 543, 877
Hin1II CATG 1 cut(s) 841
Hin6I GCGC 2 cut(s) 541, 875
HinP1I GCGC 2 cut(s) 541, 875
HinfI GANTC 3 cut(s) 262, 682, 914
Hpy166II GTNNAC 2 cut(s) 73, 373
Hpy188I TCNGA 2 cut(s) 46, 607
Hpy188III TCNNGA 5 cut(s) 65, 217, 443, 665, 804
Hpy8I GTNNAC 2 cut(s) 73, 373
HpyAV CCTTC 4 cut(s) 189, 280, 554, 876
HpyCH4V TGCA 4 cut(s) 323, 373, 438, 551
HpyF10VI GCNNNNNNNGC 3 cut(s) 275, 410, 538
HpyF3I CTNAG 1 cut(s) 153
Hsp92II CATG 1 cut(s) 841
HspAI GCGC 2 cut(s) 541, 875
Kzo9I GATC 4 cut(s) 10, 467, 748, 939
LmnI GCTCC 4 cut(s) 274, 529, 727, 872
LweI GCATC 2 cut(s) 412, 642
MaeI CTAG 1 cut(s) 393
MaeIII GTNAC 1 cut(s) 674
MalI GATC 4 cut(s) 12, 469, 750, 941
MboI GATC 4 cut(s) 10, 467, 748, 939
MboII GAAGA 4 cut(s) 106, 109, 353, 680
MflI RGATCY 1 cut(s) 939
MhlI GDGCHC 2 cut(s) 271, 375
MluCI AATT 4 cut(s) 40, 102, 350, 918
MlyI GAGTC 3 cut(s) 256, 691, 908
Mph1103I ATGCAT 1 cut(s) 440
MseI TTAA 3 cut(s) 27, 639, 687
MslI CAYNNNNRTG 1 cut(s) 842
MspCI CTTAAG 1 cut(s) 686
MspR9I CCNGG 2 cut(s) 58, 879
Mva1269I GAATGC 1 cut(s) 438
MvaI CCWGG 2 cut(s) 58, 879
MwoI GCNNNNNNNGC 3 cut(s) 275, 410, 538
NdeI CATATG 1 cut(s) 645
NdeII GATC 4 cut(s) 10, 467, 748, 939
NlaIII CATG 1 cut(s) 841
NlaIV GGNNCC 2 cut(s) 559, 941
NsiI ATGCAT 1 cut(s) 440
NspV TTCGAA 1 cut(s) 592
PctI GAATGC 1 cut(s) 438
PleI GAGTC 3 cut(s) 256, 690, 908
PpsI GAGTC 3 cut(s) 256, 690, 908
PpuMI RGGWCCY 1 cut(s) 577
Psp5II RGGWCCY 1 cut(s) 577
Psp6I CCWGG 2 cut(s) 56, 877
PspFI CCCAGC 1 cut(s) 935
PspGI CCWGG 2 cut(s) 56, 877
PspN4I GGNNCC 2 cut(s) 559, 941
PspPI GGNCC 2 cut(s) 176, 577
PspPPI RGGWCCY 1 cut(s) 577
PstNI CAGNNNCTG 1 cut(s) 425
PsuI RGATCY 1 cut(s) 939
RseI CAYNNNNRTG 1 cut(s) 842
SaqAI TTAA 3 cut(s) 27, 639, 687
Sau3AI GATC 4 cut(s) 10, 467, 748, 939
Sau96I GGNCC 2 cut(s) 176, 577
SchI GAGTC 3 cut(s) 256, 691, 908
ScrFI CCNGG 2 cut(s) 58, 879
SduI GDGCHC 2 cut(s) 271, 375
SetI ASST 7 cut(s) 72, 120, 193, 280, 496, 534, 579
SfaNI GCATC 2 cut(s) 412, 642
SfuI TTCGAA 1 cut(s) 592
SinI GGWCC 2 cut(s) 176, 577
SmiMI CAYNNNNRTG 1 cut(s) 842
SmlI CTYRAG 5 cut(s) 65, 356, 533, 686, 863
SmoI CTYRAG 5 cut(s) 65, 356, 533, 686, 863
SpeI ACTAGT 1 cut(s) 392
Sse9I AATT 4 cut(s) 40, 102, 350, 918
SsiI CCGC 1 cut(s) 413
SspI AATATT 1 cut(s) 18
SspMI CTAG 1 cut(s) 393
StyD4I CCNGG 2 cut(s) 56, 877
TaqI TCGA 6 cut(s) 13, 312, 521, 592, 759, 830
TasI AATT 4 cut(s) 40, 102, 350, 918
Tru1I TTAA 3 cut(s) 27, 639, 687
Tru9I TTAA 3 cut(s) 27, 639, 687
TscAI CASTG 2 cut(s) 154, 477
TspDTI ATGAA 3 cut(s) 287, 298, 723
TspGWI ACGGA 1 cut(s) 390
TspRI CASTG 2 cut(s) 154, 477
Vha464I CTTAAG 1 cut(s) 686
VneI GTGCAC 1 cut(s) 371
VpaK11BI GGWCC 2 cut(s) 176, 577
XapI RAATTY 3 cut(s) 40, 102, 350
XspI CTAG 1 cut(s) 393
Zsp2I ATGCAT 1 cut(s) 440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.