Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0005169

Physical Location & Seq

Genomic Coordinates Forward (+)

31005825 .. 31013254

Gene Structure 7430 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG300300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGTGTCTTGGTTTCAGGTGCAAATCTTGCAACCTTGATGCTAGTACAGATGATGTTGAAGATTGGGTGTACAACCAATTAGAGAACACAACCCATCTTCTGCATGGAGTGGTCCATTCAAATGGTTTTGGACACCTTCTTAGGGTCAATGGAAGGGAAGGTGGCTCGAGGATGCTTTCTGGATGTCATATCATGGACTTTTGGGACCGGCTCTGTAAAGTGCTTGGAGTGAGAATGGTCAGTGTGATGGATGTGTCAAAGAAGTATGGGCTGGAATATCGGCTACTTCATGCAATTATCAAAGGACATCCCTGGTATGGTGACTGGGGTTATGAATTTGCTACTGGTAGTTTTGCTCTCACTCTTGATGCCTATAATTTGGCTGTTGAAAAACTCTCTACCCTACCCCTGTCCACCTTTCTTGCTCAACGTCGATTTCCATCTTGCATCCGTGACATCATCTTGCGATACCAGTCCCTATCAGAACGTGAGCTTTTGAATATAAGAGATCTCTTTGGTTTCTTGATTAAATTGCTCCATGATGCTCCCAAGTGTTCTTCAAGGGTTGATGATGCCATGAGCAAGAAGCGACGTGCTTCCGGAGTTTTGTATTCATGGACCAAGAGTGATGTTGAATGTGTAGAAGAGGCCATGGTCAAGGTGCTGCGTGCAGTTACTGGGTCAAATTGGGTTAATCAGCGTAATCTTAGGAAAGCCATATACAAGGGGCAACCATCTGATCTCCTGGATTATTGCCTGAACGAACTTGGAGGGAAAACGGTAGCAGATGGGATCTTTGTTAGTTCTAGACGCAATGCTGATGGTGATTTTGAGTACAGACTTGAGGCTGGAAGTAGTGCATCAAACTGCTCTTCCACCTCTAGAAGCCTATCAGAAGAAAGTCTCGTACTGGACATGCGCTTCTTATATGAGTCCATGCTCCACCCCCAAACTATGATGAAAGATTTGCCTCAGGAAACAAGGGATCTTGCAATCAGCTGTGCTGAAAAGCTACTTGACTGCAAGCAGTTTGTGAAAGACTACAGGCCCGAAAGGATGTCAATTAATGACCCATCTGTTACATGTCTCTTATGTAGAGTTGAATTTACAGACGAGTCTGAAGAATATGCCTCCCTGGATCCCCCTCCAGAACTGATTGTGCTATCCAATGCTACTGTATCTGATCTCAAGCTTGCAGCATCAAAAGCTTTTCAAAATGTGTATTTGACGTTGAAGAGGTTTCAAGCTGAAGAGTTGGTTGACTATGGCAGTGTTGATGAATCCACCCAGGTTAAGAAGTTGTTAGGGTTAGCAGAATATGTTCGAGTGAGAGGGCGGTGCAATGCAAAGAGCGGATGGAGTAAGTTTAGCATGGAGAGAGGGATTGAGAGGTGGACAGTGGAGTGCAGCTGTGGGGCAAAGGATGATGATGGAGAGAGAATGTTGGCTTGTGATGTTTGTGGTGTGTGGCGGCACACTCGATGTTCTGGAATCCCAGACTCTGATTCGGTTCCTACAAATTTTGTTTGTCAAGGATGTAAAAGCTCAGTTTCAGTAACAAAAAATGCTGGGCCTTGCAAGGATGAGGCGGTTGCTAAGGTTGCTGGAGAAAGTTTGACTGCCCCTCCTGGCGCTCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

546

Amino Acids

61.07

Weight (kDa)

6.26

Isoelectric Point (pI)

35.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_plant_repro	PF25874	206 - 282	6.8e-07	Winged helix-turn-helix domain in plant reproductive proteins
Ubiquitin_At1g33420	PF25565	358 - 447	3.2e-27	At1g33420-like, ubiquitin-like domain
PHD	PF00628	469 - 513	2e-07	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005169)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g25980 FvH4_1g25980 FvH4_1g25980 FvH4_1g25980 FvH4_1g25980 FvH4_1g25980 FvH4_1g25980 FvH4_1g25980 FvH4_1g25980
malus_domestica	MD15G1141000.v1.1
prunus_persica	Prupe.4G288800_v2.0.a1 Prupe.4G288800_v2.0.a1 Prupe.4G288800_v2.0.a1 Prupe.4G288800_v2.0.a1 Prupe.4G288800_v2.0.a1 Prupe.4G288800_v2.0.a1
pyrus_communis	pycom15g12740
rosa_chinensis	RchiOBHm_Chr3g0485271
rosa_laevigata	RLG00000023161
rosa_multiflora	Rmu_sc0001136.1_g000035 Rmu_sc0010132.1_g000001
rosa_roxburghii	Rroxscaffold_6G00397140
rosa_rugosa	Rorug03G0217200 Rorug03G0217300 Rorug03G0217400
rosa_samantha	Rh3AG266600 Rh3BG302300 Rh3CG300300 Rh3DG296500
rosa_wichuraiana	Rw3G023750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1353
AccIII	TCCGGA	1 cut(s)	599
AciI	CCGC	4 cut(s)	1336, 1353, 1471, 1589
AclWI	GGATC	4 cut(s)	800, 993, 1133, 1146
AcsI	RAATTY	3 cut(s)	335, 1103, 1519
AcuI	CTGAAG	2 cut(s)	1140, 1269
AfaI	GTAC	4 cut(s)	46, 71, 836, 909
AfiI	CCNNNNNNNGG	2 cut(s)	142, 317
AflIII	ACRYGT	1 cut(s)	1082
AjiI	CACGTC	1 cut(s)	593
AjnI	CCWGG	5 cut(s)	311, 744, 1134, 1287, 1627
AluBI	AGCT	8 cut(s)	493, 999, 1012, 1192, 1208, 1247, 1410, 1545
AluI	AGCT	8 cut(s)	493, 999, 1012, 1192, 1208, 1247, 1410, 1545
Alw26I	GTCTC	2 cut(s)	908, 1091
AlwI	GGATC	4 cut(s)	800, 993, 1133, 1146
AlwNI	CAGNNNCTG	2 cut(s)	677, 1502
Ama87I	CYCGRG	1 cut(s)	166
Aor13HI	TCCGGA	1 cut(s)	599
AoxI	GGCC	3 cut(s)	648, 1046, 1571
ApeKI	GCWGC	3 cut(s)	664, 1196, 1407
ApoI	RAATTY	3 cut(s)	335, 1103, 1519
AseI	ATTAAT	1 cut(s)	1065
Asp700I	GAANNNNTTC	1 cut(s)	1320
AspLEI	GCGC	2 cut(s)	921, 1634
AspS9I	GGNCC	5 cut(s)	112, 205, 618, 1047, 1571
AsuHPI	GGTGA	2 cut(s)	332, 836
AvaI	CYCGRG	1 cut(s)	166
AvaII	GGWCC	3 cut(s)	112, 205, 618
AxyI	CCTNAGG	1 cut(s)	972
BamHI	GGATCC	1 cut(s)	1138
BbvI	GCAGC	3 cut(s)	651, 1208, 1419
BccI	CCATC	9 cut(s)	102, 241, 448, 742, 782, 815, 1081, 1350, 1424
BciT130I	CCWGG	5 cut(s)	313, 746, 1136, 1289, 1629
BcoDI	GTCTC	2 cut(s)	908, 1091
BfaI	CTAG	3 cut(s)	42, 807, 882
BfmI	CTRYAG	1 cut(s)	1042
BfoI	RGCGCY	1 cut(s)	1635
BglII	AGATCT	1 cut(s)	508
BisI	GCNGC	4 cut(s)	665, 1197, 1408, 1472
BlsI	GCNGC	4 cut(s)	666, 1198, 1409, 1473
Bme1390I	CCNGG	5 cut(s)	313, 746, 1136, 1289, 1629
Bme18I	GGWCC	3 cut(s)	112, 205, 618
BmeT110I	CYCGRG	1 cut(s)	166
BmgBI	CACGTC	1 cut(s)	593
BmgT120I	GGNCC	5 cut(s)	112, 205, 618, 1047, 1571
BmiI	GGNNCC	3 cut(s)	206, 1140, 1512
BmrFI	CCNGG	5 cut(s)	313, 746, 1136, 1289, 1629
BmrI	ACTGGG	2 cut(s)	334, 687
BmsI	GCATC	8 cut(s)	28, 162, 358, 456, 532, 562, 869, 1208
BmuI	ACTGGG	2 cut(s)	334, 687
BpmI	CTGGAG	2 cut(s)	1131, 1626
Bpu10I	CCTNAGC	1 cut(s)	1596
BpuEI	CTTGAG	2 cut(s)	863, 1172
BsaBI	GATNNNNATC	1 cut(s)	439
BsaJI	CCNNGG	4 cut(s)	311, 651, 1134, 1287
BsaWI	WCCGGW	1 cut(s)	599
BsaXI	ACNNNNNCTCC	2 cut(s)	1609, 1639
Bsc4I	CCNNNNNNNGG	2 cut(s)	142, 317
Bse118I	RCCGGY	1 cut(s)	207
Bse1I	ACTGG	5 cut(s)	329, 349, 472, 682, 915
Bse21I	CCTNAGG	1 cut(s)	972
Bse3DI	GCAATG	2 cut(s)	820, 1348
Bse8I	GATNNNNATC	1 cut(s)	439
BseAI	TCCGGA	1 cut(s)	599
BseBI	CCWGG	5 cut(s)	313, 746, 1136, 1289, 1629
BseDI	CCNNGG	4 cut(s)	311, 651, 1134, 1287
BseJI	GATNNNNATC	1 cut(s)	439
BseLI	CCNNNNNNNGG	2 cut(s)	142, 317
BseMI	GCAATG	2 cut(s)	820, 1348
BseMII	CTCAG	2 cut(s)	986, 1560
BseNI	ACTGG	5 cut(s)	329, 349, 472, 682, 915
BseXI	GCAGC	3 cut(s)	651, 1208, 1419
BseYI	CCCAGC	1 cut(s)	1568
BsgI	GTGCAG	2 cut(s)	690, 1426
BshFI	GGCC	3 cut(s)	650, 1048, 1573
BsiHKCI	CYCGRG	1 cut(s)	166
BsiSI	CCGG	2 cut(s)	208, 600
BslFI	GGGAC	2 cut(s)	218, 460
BslI	CCNNNNNNNGG	2 cut(s)	142, 317
BsmAI	GTCTC	2 cut(s)	908, 1091
BsmFI	GGGAC	2 cut(s)	218, 460
BsnI	GGCC	3 cut(s)	650, 1048, 1573
BsoBI	CYCGRG	1 cut(s)	166
Bsp13I	TCCGGA	1 cut(s)	599
Bsp1407I	TGTACA	1 cut(s)	69
Bsp143I	GATC	6 cut(s)	508, 739, 792, 985, 1138, 1183
Bsp19I	CCATGG	1 cut(s)	651
BspACI	CCGC	4 cut(s)	1336, 1353, 1471, 1589
BspANI	GGCC	3 cut(s)	650, 1048, 1573
BspCNI	CTCAG	2 cut(s)	985, 1559
BspEI	TCCGGA	1 cut(s)	599
BspLI	GGNNCC	3 cut(s)	206, 1140, 1512
BspPI	GGATC	4 cut(s)	800, 993, 1133, 1146
BspQI	GCTCTTC	1 cut(s)	877
BsrBI	CCGCTC	1 cut(s)	1353
BsrDI	GCAATG	2 cut(s)	820, 1348
BsrFI	RCCGGY	1 cut(s)	207
BsrGI	TGTACA	1 cut(s)	69
BsrI	ACTGG	5 cut(s)	329, 349, 472, 682, 915
BssAI	RCCGGY	1 cut(s)	207
BssECI	CCNNGG	4 cut(s)	311, 651, 1134, 1287
BssMI	GATC	6 cut(s)	508, 739, 792, 985, 1138, 1183
BssT1I	CCWWGG	1 cut(s)	651
Bst2UI	CCWGG	5 cut(s)	313, 746, 1136, 1289, 1629
Bst4CI	ACNGT	3 cut(s)	781, 1177, 1399
Bst6I	CTCTTC	4 cut(s)	639, 877, 1229, 1245
BstAPI	GCANNNNNTGC	1 cut(s)	27
BstAUI	TGTACA	1 cut(s)	69
BstC8I	GCNNGC	4 cut(s)	669, 1025, 1194, 1636
BstDEI	CTNAG	5 cut(s)	140, 707, 972, 1546, 1596
BstDSI	CCRYGG	1 cut(s)	651
BstH2I	RGCGCY	1 cut(s)	1635
BstHHI	GCGC	2 cut(s)	921, 1634
BstKTI	GATC	6 cut(s)	511, 742, 795, 988, 1141, 1186
BstMAI	GTCTC	2 cut(s)	908, 1091
BstMBI	GATC	6 cut(s)	508, 739, 792, 985, 1138, 1183
BstMWI	GCNNNNNNNGC	3 cut(s)	27, 1205, 1601
BstNI	CCWGG	5 cut(s)	313, 746, 1136, 1289, 1629
BstNSI	RCATGY	2 cut(s)	919, 1086
BstSCI	CCNGG	5 cut(s)	311, 744, 1134, 1287, 1627
BstSFI	CTRYAG	1 cut(s)	1042
BstV1I	GCAGC	3 cut(s)	651, 1208, 1419
BstX2I	RGATCY	4 cut(s)	508, 792, 985, 1138
BstXI	CCANNNNNNTGG	1 cut(s)	122
BstYI	RGATCY	4 cut(s)	508, 792, 985, 1138
Bsu36I	CCTNAGG	1 cut(s)	972
BsuRI	GGCC	3 cut(s)	650, 1048, 1573
BtgI	CCRYGG	1 cut(s)	651
BtrI	CACGTC	1 cut(s)	593
BtsI	GCAGTG	1 cut(s)	1276
BtsIMutI	CAGTG	3 cut(s)	247, 1276, 1404
Cac8I	GCNNGC	4 cut(s)	669, 1025, 1194, 1636
CaiI	CAGNNNCTG	2 cut(s)	677, 1502
CfoI	GCGC	2 cut(s)	921, 1634
Cfr10I	RCCGGY	1 cut(s)	207
Cfr13I	GGNCC	5 cut(s)	112, 205, 618, 1047, 1571
CseI	GACGC	1 cut(s)	819
Csp6I	GTAC	4 cut(s)	45, 70, 835, 908
CspCI	CAANNNNNGTGG	2 cut(s)	403, 438
CviQI	GTAC	4 cut(s)	45, 70, 835, 908
DdeI	CTNAG	5 cut(s)	140, 707, 972, 1546, 1596
DpnI	GATC	6 cut(s)	510, 741, 794, 987, 1140, 1185
DpnII	GATC	6 cut(s)	508, 739, 792, 985, 1138, 1183
Eam1104I	CTCTTC	4 cut(s)	639, 877, 1229, 1245
EarI	CTCTTC	4 cut(s)	639, 877, 1229, 1245
Eco130I	CCWWGG	1 cut(s)	651
Eco47I	GGWCC	3 cut(s)	112, 205, 618
Eco57I	CTGAAG	2 cut(s)	1140, 1269
Eco81I	CCTNAGG	1 cut(s)	972
Eco88I	CYCGRG	1 cut(s)	166
EcoRII	CCWGG	5 cut(s)	311, 744, 1134, 1287, 1627
EcoT14I	CCWWGG	1 cut(s)	651
ErhI	CCWWGG	1 cut(s)	651
FaqI	GGGAC	2 cut(s)	218, 460
Fnu4HI	GCNGC	4 cut(s)	665, 1197, 1408, 1472
Fsp4HI	GCNGC	4 cut(s)	665, 1197, 1408, 1472
FspBI	CTAG	3 cut(s)	42, 807, 882
GlaI	GCGC	2 cut(s)	920, 1633
GluI	GCNGC	4 cut(s)	665, 1197, 1408, 1472
GsaI	CCCAGC	1 cut(s)	1572
GsuI	CTGGAG	2 cut(s)	1131, 1626
HaeII	RGCGCY	1 cut(s)	1635
HaeIII	GGCC	3 cut(s)	650, 1048, 1573
HapII	CCGG	2 cut(s)	208, 600
HgaI	GACGC	1 cut(s)	819
HhaI	GCGC	2 cut(s)	921, 1634
Hin6I	GCGC	2 cut(s)	919, 1632
HinP1I	GCGC	2 cut(s)	919, 1632
HincII	GTYRAC	1 cut(s)	1261
HindII	GTYRAC	1 cut(s)	1261
HindIII	AAGCTT	2 cut(s)	1190, 1206
HinfI	GANTC	6 cut(s)	932, 1115, 1280, 1491, 1499, 1505
HpaII	CCGG	2 cut(s)	208, 600
HphI	GGTGA	2 cut(s)	332, 836
Hpy166II	GTNNAC	4 cut(s)	70, 414, 1261, 1395
Hpy188I	TCNGA	6 cut(s)	484, 739, 895, 1120, 1183, 1504
Hpy188III	TCNNGA	9 cut(s)	180, 365, 523, 600, 807, 882, 974, 1148, 1488
Hpy8I	GTNNAC	4 cut(s)	70, 414, 1261, 1395
Hpy99I	CGWCG	2 cut(s)	435, 594
HpyAV	CCTTC	3 cut(s)	146, 147, 152
HpyCH4III	ACNGT	3 cut(s)	781, 1177, 1399
HpyCH4IV	ACGT	4 cut(s)	430, 487, 592, 1229
HpyF10VI	GCNNNNNNNGC	3 cut(s)	27, 1205, 1601
HpyF3I	CTNAG	5 cut(s)	140, 707, 972, 1546, 1596
HpySE526I	ACGT	4 cut(s)	430, 487, 592, 1229
HspAI	GCGC	2 cut(s)	919, 1632
Kpn2I	TCCGGA	1 cut(s)	599
Kzo9I	GATC	6 cut(s)	508, 739, 792, 985, 1138, 1183
LguI	GCTCTTC	1 cut(s)	877
LmnI	GCTCC	3 cut(s)	540, 550, 945
Lsp1109I	GCAGC	3 cut(s)	651, 1208, 1419
LweI	GCATC	8 cut(s)	28, 162, 358, 456, 532, 562, 869, 1208
MaeI	CTAG	3 cut(s)	42, 807, 882
MaeII	ACGT	4 cut(s)	430, 487, 592, 1229
MaeIII	GTNAC	5 cut(s)	320, 452, 673, 1078, 1555
MalI	GATC	6 cut(s)	510, 741, 794, 987, 1140, 1185
MbiI	CCGCTC	1 cut(s)	1353
MboI	GATC	6 cut(s)	508, 739, 792, 985, 1138, 1183
MboII	GAAGA	9 cut(s)	71, 89, 549, 656, 864, 908, 1133, 1246, 1262
MflI	RGATCY	4 cut(s)	508, 792, 985, 1138
MluCI	AATT	9 cut(s)	77, 294, 335, 376, 530, 685, 1062, 1103, 1519
MlyI	GAGTC	3 cut(s)	941, 1124, 1493
MroI	TCCGGA	1 cut(s)	599
MroXI	GAANNNNTTC	1 cut(s)	1320
MseI	TTAA	4 cut(s)	528, 693, 1065, 1293
MslI	CAYNNNNRTG	1 cut(s)	120
MspA1I	CMGCKG	2 cut(s)	999, 1410
MspI	CCGG	2 cut(s)	208, 600
MspR9I	CCNGG	5 cut(s)	313, 746, 1136, 1289, 1629
MvaI	CCWGG	5 cut(s)	313, 746, 1136, 1289, 1629
MwoI	GCNNNNNNNGC	3 cut(s)	27, 1205, 1601
NcoI	CCATGG	1 cut(s)	651
NdeII	GATC	6 cut(s)	508, 739, 792, 985, 1138, 1183
NlaIV	GGNNCC	3 cut(s)	206, 1140, 1512
NmuCI	GTSAC	2 cut(s)	320, 452
NspI	RCATGY	2 cut(s)	919, 1086
PaeR7I	CTCGAG	1 cut(s)	166
PciI	ACATGT	1 cut(s)	1082
PciSI	GCTCTTC	1 cut(s)	877
PdmI	GAANNNNTTC	1 cut(s)	1320
PfeI	GAWTC	3 cut(s)	1280, 1491, 1505
PfoI	TCCNGGA	1 cut(s)	744
PkrI	GCNGC	4 cut(s)	666, 1198, 1409, 1473
PleI	GAGTC	3 cut(s)	940, 1123, 1493
PpsI	GAGTC	3 cut(s)	940, 1123, 1493
PscI	ACATGT	1 cut(s)	1082
PshBI	ATTAAT	1 cut(s)	1065
Psp6I	CCWGG	5 cut(s)	311, 744, 1134, 1287, 1627
PspFI	CCCAGC	1 cut(s)	1568
PspGI	CCWGG	5 cut(s)	311, 744, 1134, 1287, 1627
PspN4I	GGNNCC	3 cut(s)	206, 1140, 1512
PspPI	GGNCC	5 cut(s)	112, 205, 618, 1047, 1571
PspXI	VCTCGAGB	1 cut(s)	166
PstNI	CAGNNNCTG	2 cut(s)	677, 1502
PsuI	RGATCY	4 cut(s)	508, 792, 985, 1138
PvuII	CAGCTG	2 cut(s)	999, 1410
RsaI	GTAC	4 cut(s)	46, 71, 836, 909
RsaNI	GTAC	4 cut(s)	45, 70, 835, 908
RseI	CAYNNNNRTG	1 cut(s)	120
SapI	GCTCTTC	1 cut(s)	877
SaqAI	TTAA	4 cut(s)	528, 693, 1065, 1293
SatI	GCNGC	4 cut(s)	665, 1197, 1408, 1472
Sau3AI	GATC	6 cut(s)	508, 739, 792, 985, 1138, 1183
Sau96I	GGNCC	5 cut(s)	112, 205, 618, 1047, 1571
SchI	GAGTC	3 cut(s)	941, 1124, 1493
ScrFI	CCNGG	5 cut(s)	313, 746, 1136, 1289, 1629
SfaNI	GCATC	8 cut(s)	28, 162, 358, 456, 532, 562, 869, 1208
SfcI	CTRYAG	1 cut(s)	1042
Sfr274I	CTCGAG	1 cut(s)	166
SinI	GGWCC	3 cut(s)	112, 205, 618
SlaI	CTCGAG	1 cut(s)	166
SmiMI	CAYNNNNRTG	1 cut(s)	120
SmlI	CTYRAG	3 cut(s)	166, 842, 1187
SmoI	CTYRAG	3 cut(s)	166, 842, 1187
Sse9I	AATT	9 cut(s)	77, 294, 335, 376, 530, 685, 1062, 1103, 1519
SsiI	CCGC	4 cut(s)	1336, 1353, 1471, 1589
SspMI	CTAG	3 cut(s)	42, 807, 882
StyD4I	CCNGG	5 cut(s)	311, 744, 1134, 1287, 1627
StyI	CCWWGG	1 cut(s)	651
TaaI	ACNGT	3 cut(s)	781, 1177, 1399
TaiI	ACGT	4 cut(s)	433, 490, 595, 1232
TaqI	TCGA	4 cut(s)	167, 433, 1324, 1480
TasI	AATT	9 cut(s)	77, 294, 335, 376, 530, 685, 1062, 1103, 1519
TatI	WGTACW	3 cut(s)	44, 69, 834
TauI	GCSGC	1 cut(s)	1474
TfiI	GAWTC	3 cut(s)	1280, 1491, 1505
Tru1I	TTAA	4 cut(s)	528, 693, 1065, 1293
Tru9I	TTAA	4 cut(s)	528, 693, 1065, 1293
TscAI	CASTG	3 cut(s)	247, 1276, 1404
TseFI	GTSAC	2 cut(s)	320, 452
TseI	GCWGC	3 cut(s)	664, 1196, 1407
Tsp45I	GTSAC	2 cut(s)	320, 452
TspDTI	ATGAA	5 cut(s)	278, 348, 603, 974, 1293
TspGWI	ACGGA	1 cut(s)	440
TspRI	CASTG	3 cut(s)	247, 1276, 1404
VpaK11BI	GGWCC	3 cut(s)	112, 205, 618
VspI	ATTAAT	1 cut(s)	1065
XapI	RAATTY	3 cut(s)	335, 1103, 1519
XbaI	TCTAGA	2 cut(s)	806, 881
XceI	RCATGY	2 cut(s)	919, 1086
XcmI	CCANNNNNNNNNTGG	1 cut(s)	101
XhoI	CTCGAG	1 cut(s)	166
XmnI	GAANNNNTTC	1 cut(s)	1320
XspI	CTAG	3 cut(s)	42, 807, 882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.