Rh3DG291100

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0016934
Physical Location & Seq
Forward (+)
30101708 .. 30107700
5993 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG291100.1

Sequence Viewer

Length: 2031 bp
ATGTTCAAATCATGTTTGGTTGATTCGGCTTTTCTCCGAAACTGTGTGTTTTTTGTCAATAGGGTGAGTTTTAGAGTGTATTCTGCTGCTGCTTCTGCATTGTTGCTGGAGGATCATGTGTTTGTGAAAGCTCCATTACCCTTTGAGGCCTTTGCAGTTCAGGAAATTAAAGCTCTGGGGAAAAAGTTTTGTACTCAGAGAAAGAAAAATTTGTATCCCTTTGTTGTCAGATTGTTTAAAACTTTGAATTGGGAGGTCGCATGGGATGCAAGGCTCTCTAAGTCTGTGAAAGAGCATGGCTTTTCTCATTCTTTAAATGCCTTTAGAATTATTGTTCATGAATTTGCATTGGTGGGAATGCAAATGGAAGTGCAGGCTTTGCTTAGAGATGTTGTATGCTATTATCAAGAAGCTAAGTATGATGCATTTGAGCTGTTCCCATATTTATTGGATTCACCTCACAGTGGGGTGAGATCGCTTGTTGTATTTGATGCACTAATAACGGCTTTCGCTGACAACTCGATGCCTGAGAATGCTGTGGATGTGTTTTTGAAGATTAAAAGAATGGGTCTTGAGCCACACATTTGGTCTTGTAATATCTTGCTCAAGTGTTTGGCAGAAGCAAACAAACTGGAATGTGTTAGAAACTTATTCGAATGTTTGAAAAACTCTGGGCCATCTCCTAATGTTTACACTTACACAGTTATGATGAGCTTTTTCTGTACAGGATATCCACTGCAGGATGTGGGTATCAGTCAGGCGACTGACATTCTTCAAGAAATGGAGAAGAGTGGGAAACACCCAACTGCAGTGATATATGCTGAATATATTCATGGACTTTGTAAAGCTGGATATGTTGAGTTTGCTTTGGACTTCATCCGAAACATGCAACACAGAGACCAACCTCTCAATAGTTATTGTTATAATGCTGTCCTTCGTGGGTTTTGCCAAAAAGGCGAAACTTGTAAAGCTCTAAAATTGTTGGAGGAAATGAAGAGCTACGGGATGGTGCCAGATGTTTATTGCTACACCATATTGATAGATGGATTTTGCAAGGAAGGGGATATAGAGAAAGCTCTTGCTTTGTTTGAGGAAATGGAGCTTTGTAAAATAAAACCTTCTTTGGTTAGCTATAGCTCACTCATATACGGTCTTTGCAAACTTGGATTGATAGATCATATGTTAGATATATATCGTAATCTGGAGTCTGCCGGTGTGTGCCCTGATGCTATCACTTGCACTCTCATTGTTGATGGGTATTGCAGGGAAGGGCGCTTGGAGGAAGCCTTGAGATTTATTTACAAGATGTATCATCAAGGCATAAGCCCTAACTCGTATACTTATAATGCAGTCCTCAACAGTTTGTGCAAGCAAGGAAAGCCAGAAAAAGCATGGGAACTAATCCCTCAAATGCTTAAAAGGAATATACTCCCAGAAGTTGCAAATTATAATACTCTTATAAATGGCTTTGGAAAACAGTTGAATTCAAAGAAGGCCTGCATGGTGTATGGAGGAATGCTCAAAGCTGGTGTCATGCCCAATACAGTCACATATACAATCCTTATGAATATACTCTGCCATAGAGGCAAAATATATGAAGCTTGTAACATGTTCAAGGAAATGAGTGAAAGGGGTTTGGCTGCAGATGTGATTTCTTATACATCTCTAATTGCTGGGTTTTGTAGGATGGGAGACATGAAGAAGGCTTGGGTACTGTTCAAAGAAATGTTGAGCAAAAACCATTTGCCCAATGCTATCACGTATACGTGTTTAATAGATGGTTTTTGCAAGTCCTCTCGCATGGATTATGCCAGTTTCTTGTTTGAGGAAATGAAGAACAAAAATGTTACTCCTGATCTGGTGACTTACACTGTTCTCATCATTGGGTACTGTAGGCTCCGGAATATTGATAGAGCAATTCAGTTATTTGATGAAATGAAGCACAGTGGTATCTCAGGGGATGGTTTTGCCAATGAAGCTTTGGGGCTTTACACCAAAGATTGGTTTGTTTACAAAAGATTAGAAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_1 PPR_2 PPR_3

Protein Analysis

676

Amino Acids

76.97

Weight (kDa)

8.1

Isoelectric Point (pI)

36.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 194 - 241 2e-08 PPR repeat family
PPR_2 PF13041 268 - 317 7.5e-09 PPR repeat family
PPR_long PF17177 289 - 409 3.4e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 303 - 332 2.2e-06 PPR repeat
PPR_2 PF13041 304 - 352 6.8e-17 PPR repeat family
MRP-S27 PF10037 309 - 366 1.5e-06 Mitochondrial 28S ribosomal protein S27
PPR_3 PF13812 326 - 382 2e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 335 - 367 2.5e-14 PPR repeat
PPR_2 PF13041 338 - 387 9.3e-17 PPR repeat family
PPR PF01535 342 - 369 1.1e-08 PPR repeat
PPR_2 PF13041 373 - 422 6.9e-09 PPR repeat family
TPR_24 PF23276 396 - 504 1.4e-08 Fungal tetratrico peptide repeats
PPR_3 PF13812 397 - 454 8.3e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 405 - 436 1.1e-07 PPR repeat
PPR_2 PF13041 408 - 457 5.9e-15 PPR repeat family
PPR_long PF17177 426 - 529 3.9e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 440 - 471 4.3e-08 PPR repeat
PPR PF01535 446 - 476 1.6e-06 PPR repeat
PPR_2 PF13041 447 - 478 4e-08 PPR repeat family
TPR_24 PF23276 450 - 576 2.6e-07 Fungal tetratrico peptide repeats
PPR_3 PF13812 470 - 525 1e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 478 - 527 3.8e-13 PPR repeat family
PPR_1 PF12854 510 - 542 1.5e-08 PPR repeat
PPR_2 PF13041 515 - 562 6.6e-14 PPR repeat family
PPR PF01535 516 - 546 6.1e-07 PPR repeat
TPR_24 PF23276 534 - 645 2.1e-07 Fungal tetratrico peptide repeats
PPR_3 PF13812 537 - 593 8.8e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 544 - 576 1.8e-10 PPR repeat
PPR_2 PF13041 549 - 597 4.8e-19 PPR repeat family
PPR PF01535 551 - 580 3.2e-08 PPR repeat
PPR_long PF17177 570 - 652 7.5e-09 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 579 - 612 2e-10 PPR repeat
PPR PF01535 586 - 616 5.6e-07 PPR repeat
PPR_2 PF13041 586 - 632 2.2e-15 PPR repeat family
PPR_3 PF13812 607 - 652 1.8e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 614 - 647 4.3e-11 PPR repeat
PPR_2 PF13041 618 - 654 2.6e-09 PPR repeat family
PPR PF01535 621 - 651 9.7e-09 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016934)

Species Orthologous Gene IDs
malus_domestica MD14G1081200.v1.1
pyrus_communis pycom12g07360 pycom14g07050
rosa_chinensis RchiOBHm_Chr3g0484571
rosa_laevigata RLG00000023219
rosa_multiflora Rmu_co8455711.1_g000001 Rmu_sc0000295.1_g000038 Rmu_sc0032195.1_g000001
rosa_roxburghii Rroxscaffold_6G00397630
rosa_rugosa Rorug03G0211700
rosa_samantha Rh3AG262500 Rh3BG297800 Rh3CG294800 Rh3DG291100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 924, 1344, 1449, 1460
AccB1I GGYRCC 1 cut(s) 1009
AccB7I CCANNNNNTGG 1 cut(s) 2001
AccI GTMKAC 2 cut(s) 1337, 1763
AccIII TCCGGA 1 cut(s) 1899
AclWI GGATC 1 cut(s) 120
AcsI RAATTY 3 cut(s) 208, 341, 1483
AfaI GTAC 4 cut(s) 193, 724, 1713, 1889
AfiI CCNNNNNNNGG 2 cut(s) 464, 2001
AflIII ACRYGT 2 cut(s) 1608, 1766
AgsI TTSAA 9 cut(s) 7, 247, 553, 664, 776, 1483, 1488, 1615, 1720
Alw26I GTCTC 2 cut(s) 891, 1686
AlwI GGATC 1 cut(s) 120
Aor13HI TCCGGA 1 cut(s) 1899
AoxI GGCC 3 cut(s) 147, 674, 1494
ApeKI GCWGC 3 cut(s) 86, 89, 1640
ApoI RAATTY 3 cut(s) 208, 341, 1483
ArsI GACNNNNNNTTYG 2 cut(s) 1515, 1547
Asp700I GAANNNNTTC 1 cut(s) 828
AspLEI GCGC 1 cut(s) 1275
AspS9I GGNCC 1 cut(s) 674
AsuHPI GGTGA 4 cut(s) 76, 447, 481, 1873
AsuII TTCGAA 1 cut(s) 654
BaeGI GKGCMC 1 cut(s) 1223
BaeI ACNNNNGTAYC 2 cut(s) 1933, 1966
BanI GGYRCC 1 cut(s) 1009
BbvI GCAGC 3 cut(s) 73, 76, 1627
BccI CCATC 7 cut(s) 685, 1000, 1037, 1247, 1681, 1772, 1955
BceAI ACGGC 1 cut(s) 519
BciVI GTATCC 1 cut(s) 225
BcoDI GTCTC 2 cut(s) 891, 1686
BfmI CTRYAG 5 cut(s) 737, 807, 1132, 1641, 1891
BfoI RGCGCY 1 cut(s) 1276
BfuI GTATCC 1 cut(s) 225
BglI GCCNNNNNGGC 2 cut(s) 954, 1584
BisI GCNGC 3 cut(s) 87, 90, 1641
BlsI GCNGC 3 cut(s) 88, 91, 1642
BmgT120I GGNCC 1 cut(s) 674
BmiI GGNNCC 2 cut(s) 1011, 1898
BmsI GCATC 5 cut(s) 256, 412, 481, 513, 1216
BplI GAGNNNNNCTC 2 cut(s) 1503, 1535
BpmI CTGGAG 2 cut(s) 128, 1223
Bpu14I TTCGAA 1 cut(s) 654
BpuEI CTTGAG 3 cut(s) 590, 593, 1309
BsaAI YACGTR 2 cut(s) 1761, 1767
BsaBI GATNNNNATC 1 cut(s) 1191
BsaI GGTCTC 1 cut(s) 891
BsaWI WCCGGW 1 cut(s) 1899
Bsc4I CCNNNNNNNGG 2 cut(s) 464, 2001
Bse118I RCCGGY 1 cut(s) 1211
Bse1I ACTGG 2 cut(s) 636, 1812
Bse8I GATNNNNATC 1 cut(s) 1191
BseAI TCCGGA 1 cut(s) 1899
BseGI GGATG 7 cut(s) 271, 547, 748, 876, 1011, 1692, 1966
BseJI GATNNNNATC 1 cut(s) 1191
BseLI CCNNNNNNNGG 2 cut(s) 464, 2001
BseMII CTCAG 3 cut(s) 209, 519, 1968
BseNI ACTGG 2 cut(s) 636, 1812
BseSI GKGCMC 1 cut(s) 1223
BseXI GCAGC 3 cut(s) 73, 76, 1627
BseYI CCCAGC 1 cut(s) 1673
BsgI GTGCAG 1 cut(s) 392
BshFI GGCC 3 cut(s) 149, 676, 1496
BshNI GGYRCC 1 cut(s) 1009
BsiSI CCGG 2 cut(s) 1212, 1900
BslI CCNNNNNNNGG 2 cut(s) 464, 2001
BsmAI GTCTC 2 cut(s) 891, 1686
BsmI GAATGC 3 cut(s) 363, 538, 1521
BsnI GGCC 3 cut(s) 149, 676, 1496
Bso31I GGTCTC 1 cut(s) 891
Bsp119I TTCGAA 1 cut(s) 654
Bsp1286I GDGCHC 1 cut(s) 1223
Bsp13I TCCGGA 1 cut(s) 1899
Bsp1407I TGTACA 1 cut(s) 722
Bsp143I GATC 4 cut(s) 112, 473, 1174, 1855
BspANI GGCC 3 cut(s) 149, 676, 1496
BspCNI CTCAG 3 cut(s) 208, 520, 1967
BspEI TCCGGA 1 cut(s) 1899
BspHI TCATGA 1 cut(s) 337
BspLI GGNNCC 2 cut(s) 1011, 1898
BspMAI CTGCAG 3 cut(s) 741, 811, 1645
BspPI GGATC 1 cut(s) 120
BspQI GCTCTTC 1 cut(s) 989
BspT104I TTCGAA 1 cut(s) 654
BspT107I GGYRCC 1 cut(s) 1009
BspTNI GGTCTC 1 cut(s) 891
BsrFI RCCGGY 1 cut(s) 1211
BsrGI TGTACA 1 cut(s) 722
BsrI ACTGG 2 cut(s) 636, 1812
BssAI RCCGGY 1 cut(s) 1211
BssMI GATC 4 cut(s) 112, 473, 1174, 1855
BssNAI GTATAC 2 cut(s) 1338, 1764
Bst1107I GTATAC 2 cut(s) 1338, 1764
Bst6I CTCTTC 2 cut(s) 782, 989
BstAPI GCANNNNNTGC 2 cut(s) 266, 379
BstAUI TGTACA 1 cut(s) 722
BstBAI YACGTR 2 cut(s) 1761, 1767
BstBI TTCGAA 1 cut(s) 654
BstC8I GCNNGC 3 cut(s) 375, 1370, 1498
BstDEI CTNAG 6 cut(s) 195, 279, 383, 414, 528, 1954
BstF5I GGATG 7 cut(s) 271, 547, 748, 876, 1011, 1692, 1966
BstH2I RGCGCY 1 cut(s) 1276
BstHHI GCGC 1 cut(s) 1275
BstKTI GATC 4 cut(s) 115, 476, 1177, 1858
BstMAI GTCTC 2 cut(s) 891, 1686
BstMBI GATC 4 cut(s) 112, 473, 1174, 1855
BstMWI GCNNNNNNNGC 7 cut(s) 95, 266, 379, 954, 1378, 1584, 1976
BstNSI RCATGY 2 cut(s) 889, 1612
BstSFI CTRYAG 5 cut(s) 737, 807, 1132, 1641, 1891
BstSLI GKGCMC 1 cut(s) 1223
BstV1I GCAGC 3 cut(s) 73, 76, 1627
BstXI CCANNNNNNTGG 1 cut(s) 585
BstZ17I GTATAC 2 cut(s) 1338, 1764
BsuI GTATCC 1 cut(s) 225
BsuRI GGCC 3 cut(s) 149, 676, 1496
BtsCI GGATG 7 cut(s) 271, 547, 748, 876, 1011, 1692, 1966
BtsI GCAGTG 2 cut(s) 734, 816
BtsIMutI CAGTG 5 cut(s) 469, 734, 816, 1869, 1951
Cac8I GCNNGC 3 cut(s) 375, 1370, 1498
CciI TCATGA 1 cut(s) 337
CfoI GCGC 1 cut(s) 1275
Cfr10I RCCGGY 1 cut(s) 1211
Cfr13I GGNCC 1 cut(s) 674
Csp6I GTAC 4 cut(s) 192, 723, 1712, 1888
CviQI GTAC 4 cut(s) 192, 723, 1712, 1888
DdeI CTNAG 6 cut(s) 195, 279, 383, 414, 528, 1954
DpnI GATC 4 cut(s) 114, 475, 1176, 1857
DpnII GATC 4 cut(s) 112, 473, 1174, 1855
DraI TTTAAA 2 cut(s) 238, 315
Eam1104I CTCTTC 2 cut(s) 782, 989
EarI CTCTTC 2 cut(s) 782, 989
Eco147I AGGCCT 2 cut(s) 149, 1496
Eco31I GGTCTC 1 cut(s) 891
Eco32I GATATC 1 cut(s) 731
EcoRI GAATTC 1 cut(s) 1483
EcoRV GATATC 1 cut(s) 731
EcoT22I ATGCAT 1 cut(s) 427
FauNDI CATATG 1 cut(s) 1179
FblI GTMKAC 2 cut(s) 1337, 1763
Fnu4HI GCNGC 3 cut(s) 87, 90, 1641
FokI GGATG 7 cut(s) 278, 554, 755, 863, 1018, 1699, 1973
Fsp4HI GCNGC 3 cut(s) 87, 90, 1641
GlaI GCGC 1 cut(s) 1274
GluI GCNGC 3 cut(s) 87, 90, 1641
GsaI CCCAGC 1 cut(s) 1677
GsuI CTGGAG 2 cut(s) 128, 1223
HaeII RGCGCY 1 cut(s) 1276
HaeIII GGCC 3 cut(s) 149, 676, 1496
HapII CCGG 2 cut(s) 1212, 1900
HhaI GCGC 1 cut(s) 1275
Hin6I GCGC 1 cut(s) 1273
HinP1I GCGC 1 cut(s) 1273
HindIII AAGCTT 2 cut(s) 1599, 1977
HinfI GANTC 3 cut(s) 23, 452, 1205
HpaII CCGG 2 cut(s) 1212, 1900
HphI GGTGA 4 cut(s) 76, 447, 481, 1873
Hpy166II GTNNAC 4 cut(s) 691, 1338, 1764, 2011
Hpy188I TCNGA 4 cut(s) 38, 198, 230, 881
Hpy188III TCNNGA 8 cut(s) 161, 338, 407, 572, 776, 1202, 1853, 1900
Hpy8I GTNNAC 4 cut(s) 691, 1338, 1764, 2011
HpyAV CCTTC 6 cut(s) 944, 1052, 1128, 1262, 1486, 1696
HpyCH4IV ACGT 2 cut(s) 1760, 1766
HpyF10VI GCNNNNNNNGC 7 cut(s) 95, 266, 379, 954, 1378, 1584, 1976
HpyF3I CTNAG 6 cut(s) 195, 279, 383, 414, 528, 1954
HpySE526I ACGT 2 cut(s) 1760, 1766
HspAI GCGC 1 cut(s) 1273
Kpn2I TCCGGA 1 cut(s) 1899
Kzo9I GATC 4 cut(s) 112, 473, 1174, 1855
LguI GCTCTTC 1 cut(s) 989
LmnI GCTCC 3 cut(s) 136, 1099, 1902
Lsp1109I GCAGC 3 cut(s) 73, 76, 1627
LweI GCATC 5 cut(s) 256, 412, 481, 513, 1216
MaeII ACGT 2 cut(s) 1760, 1766
MaeIII GTNAC 4 cut(s) 1546, 1604, 1846, 1861
MalI GATC 4 cut(s) 114, 475, 1176, 1857
MboI GATC 4 cut(s) 112, 473, 1174, 1855
MboII GAAGA 6 cut(s) 565, 764, 799, 1006, 1711, 1846
MhlI GDGCHC 1 cut(s) 1223
MlyI GAGTC 1 cut(s) 1214
MmeI TCCRAC 1 cut(s) 963
Mph1103I ATGCAT 1 cut(s) 427
MroI TCCGGA 1 cut(s) 1899
MroXI GAANNNNTTC 1 cut(s) 828
MseI TTAA 6 cut(s) 168, 237, 314, 558, 1416, 1772
MslI CAYNNNNRTG 1 cut(s) 704
MspI CCGG 2 cut(s) 1212, 1900
Mva1269I GAATGC 3 cut(s) 363, 538, 1521
MwoI GCNNNNNNNGC 7 cut(s) 95, 266, 379, 954, 1378, 1584, 1976
NdeI CATATG 1 cut(s) 1179
NdeII GATC 4 cut(s) 112, 473, 1174, 1855
NlaIV GGNNCC 2 cut(s) 1011, 1898
NmuCI GTSAC 2 cut(s) 1546, 1861
NsiI ATGCAT 1 cut(s) 427
NspI RCATGY 2 cut(s) 889, 1612
NspV TTCGAA 1 cut(s) 654
PagI TCATGA 1 cut(s) 337
PceI AGGCCT 2 cut(s) 149, 1496
PciI ACATGT 1 cut(s) 1608
PciSI GCTCTTC 1 cut(s) 989
PctI GAATGC 3 cut(s) 363, 538, 1521
PdmI GAANNNNTTC 1 cut(s) 828
PfeI GAWTC 2 cut(s) 23, 452
PflMI CCANNNNNTGG 1 cut(s) 2001
PkrI GCNGC 3 cut(s) 88, 91, 1642
PleI GAGTC 1 cut(s) 1213
PpsI GAGTC 1 cut(s) 1213
Ppu21I YACGTR 2 cut(s) 1761, 1767
PscI ACATGT 1 cut(s) 1608
PsiI TTATAA 4 cut(s) 924, 1344, 1449, 1460
PspFI CCCAGC 1 cut(s) 1673
PspN4I GGNNCC 2 cut(s) 1011, 1898
PspPI GGNCC 1 cut(s) 674
PstI CTGCAG 3 cut(s) 741, 811, 1645
RsaI GTAC 4 cut(s) 193, 724, 1713, 1889
RsaNI GTAC 4 cut(s) 192, 723, 1712, 1888
RseI CAYNNNNRTG 1 cut(s) 704
SapI GCTCTTC 1 cut(s) 989
SaqAI TTAA 6 cut(s) 168, 237, 314, 558, 1416, 1772
SatI GCNGC 3 cut(s) 87, 90, 1641
Sau3AI GATC 4 cut(s) 112, 473, 1174, 1855
Sau96I GGNCC 1 cut(s) 674
SchI GAGTC 1 cut(s) 1214
SduI GDGCHC 1 cut(s) 1223
SfaNI GCATC 5 cut(s) 256, 412, 481, 513, 1216
SfcI CTRYAG 5 cut(s) 737, 807, 1132, 1641, 1891
SfuI TTCGAA 1 cut(s) 654
SmiMI CAYNNNNRTG 1 cut(s) 704
SmlI CTYRAG 3 cut(s) 572, 605, 1288
SmoI CTYRAG 3 cut(s) 572, 605, 1288
SseBI AGGCCT 2 cut(s) 149, 1496
SspI AATATT 1 cut(s) 1906
StuI AGGCCT 2 cut(s) 149, 1496
TaiI ACGT 2 cut(s) 1763, 1769
TaqI TCGA 2 cut(s) 521, 654
TatI WGTACW 2 cut(s) 191, 722
TfiI GAWTC 2 cut(s) 23, 452
Tru1I TTAA 6 cut(s) 168, 237, 314, 558, 1416, 1772
Tru9I TTAA 6 cut(s) 168, 237, 314, 558, 1416, 1772
TscAI CASTG 5 cut(s) 469, 741, 816, 1876, 1951
TseFI GTSAC 2 cut(s) 1546, 1861
TseI GCWGC 3 cut(s) 86, 89, 1640
Tsp45I GTSAC 2 cut(s) 1546, 1861
TspRI CASTG 5 cut(s) 469, 741, 816, 1876, 1951
Van91I CCANNNNNTGG 1 cut(s) 2001
XapI RAATTY 3 cut(s) 208, 341, 1483
XceI RCATGY 2 cut(s) 889, 1612
XcmI CCANNNNNNNNNTGG 2 cut(s) 1389, 1978
XmiI GTMKAC 2 cut(s) 1337, 1763
XmnI GAANNNNTTC 1 cut(s) 828
Zsp2I ATGCAT 1 cut(s) 427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.