Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0013838

Physical Location & Seq

Genomic Coordinates Reverse (-)

60649861 .. 60655568

Gene Structure 5708 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG293000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGGCTCGGGTGTTGCCGGACTCAACGTGCGTGACACGGAAAATTGGGGATAAAAATAGTAATAATATCAATATGAATGATAATCAAGTAGGTCCAGTTTTACGGGGTTGCAAGCAGTTTTGGAAAGCTGGGGATTATGAGGGTGACAAGGACAACGATGCTAATTCTGCCTTTTCTTCCGTTGGCATGGATCATGCGAGAATTCACCCTAGGTTTCTGCATTCGAATGCCACCAGTCACAAATGGGCTTTGGGAGCTTTTGCAGAGCTGCTAGACAATTCTTTAGATGAGGTCTGCAATGGAGCCACTTATGTTAATATTGACATGGCAAGAAATAAAAAAGATGGTAATCTGATGATTGAGGTGGAAGATAATGGTGGTGGAATGACTCCTGATAAAATGAGACAGTGCATGTCTCTTGGGTATTCAGCAAAAAGCAAAATGGCAAATACAATTGGTCAATATGGCAATGGGTTTAAGACTAGTACTATGAGACTTGGAGCAGATGTTATAGTGTTCTCTCGTTGTCAGGGGATTAATGGAACAAGCCCAACACAGACCATTGGACTGCTATCTTACAATTTCCTGAGGGGTACTGGAAAGGAAGATATAGTTGTTCCCATGATTGACTATGAGAAAAGTGGTCGAGGTTGGAACAAGATGATGCGGGCTTCTCCAGATGATTGGACAAGAAATTTAGCAACCATTGTGCAGTGGTCTCCTTATTCAAGTGAAGAAGATCTTCTTCAGCAATTTAAGTTATTTAGAGGGCATGGCACACGGATAGTAATATACAACCTTTGGGAGGATGATGAAGGACATCTGGAACTTGATTTTGATACTGATCCCCATGACATTCAAATTAGAGGAGTCAACAGGGATGAGAAGAGCATTCAGATGTCAAAAAAATATCCCAATTCTAGACACTTTTTAACTTATCGACATTCATTGAGGAGTTATGCATCAATTCTCTATCTCAGGCTTCCATCTCACTTTAGAATCATTCTGCGCGGGCAAGATATCAAACATCACAATATAGTGAATGACATGATGATGACGAAGGTGGTGACGTACAGACCTGTAAATCTCCCAGAGGGAATGCCAAAAGATTCAAATATGGCTGCCAAAGTGACTCTTGGGTTTGTGAAGGATGCACGCTCTCATATTGATATCCAAGGGTTCAACGTTTATCATAAAAATAGACTGATTAAGCCTTTTTGGCGTGTTTGGAATGCTGCAGGCAGTGATGGTCGTGGAGTTATAGGTGTGTTGGAAGCTAATTTTGTTGAACCAGCTCATGACAAACAGGGCTTTGAGCGGACAAATGTTCTTCAAAGACTTGAGCAACGATTGATTGGAATGCAAAAGGAGTTCTGGTCTAAAAATTGCCAGATTGTTGGCTATGCTCCAAGAAGACGTACTAGTGACTTTCCAGAAAGAGATTCTTCAGTATCTGATAAAGAGAAATCACCCAGAAATCAGAATGGTCATGGTTCTAGTAGTGGAGGGTATAAGGCAAGCTCAAGTAAAAAACTCAAAAAAGGATCATCACCTGTGAATGCTGAAAGTGAAGATGGGAACTGTAATGAGGCATTGCATGCTTCCATTAAACCTGAGCAAGATCATGCGTCAGACTCAAGGGAGGTTCGCATACCTTTGAAAATAGCTGATACAAATGGAGAGGGACAAGTCACGACAGACCATGTAATTGAGCGTTCGATTATGTTGAGAACAGATTCATCGATTGTGGAAAGATTGGAGGAGGCTCTAAATGATCTCAATCATGAAAGAGATAGGTGTAAATCTCTTAAAACTGAACTTGAGAAGGCAAACGAAAGAATAGAAGAGTTGGACAAAGAGCAAGAAGCACTTATTCAGATACTAGTAGCAGAAAAGACTGAAAGAGAACAGGAGGAAGAACGACTCAGGAAAAGCCTAACGGATGCTTCTAAAGCCATTGATGAGCTGCTTGAGAAGGTGAAGCGATTAGAAGGAAGGACGCCAGTGACCTGCAAAGTTGAAAAAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006282 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031935 GO:0033043 GO:0033044 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051171 GO:0051252 GO:0060255 GO:0060968 GO:0065007 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1902275 GO:1903506 GO:2000112 GO:2001020 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c_3

Protein Analysis

676

Amino Acids

76.59

Weight (kDa)

7.31

Isoelectric Point (pI)

38.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c_3	PF13589	85 - 181	8.6e-18	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c	PF02518	86 - 165	3.6e-07	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5	PF17942	315 - 459	2.3e-60	Morc6 ribosomal protein S5 domain 2-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13130 AT5G13130
fragaria_vesca	FvH4_4g23220
malus_domestica	MD13G1123700.v1.1
prunus_persica	Prupe.1G221200_v2.0.a1
pyrus_communis	pycom13g10820
rosa_chinensis	RchiOBHm_Chr4g0429571
rosa_laevigata	RLG00000007060
rosa_multiflora	Rmu_co8379671.1_g000001
rosa_roxburghii	Rroxscaffold_5G00371270
rosa_rugosa	Rorug04G0237200 Rorug04G0237300
rosa_samantha	Rh4AG293000 Rh4BG298700 Rh4CG314000 Rh4DG295500
rosa_wichuraiana	Rw4G025360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2018
AccBSI	CCGCTC	1 cut(s)	1318
AccII	CGCG	1 cut(s)	1011
AciI	CCGC	3 cut(s)	667, 1011, 1318
AclI	AACGTT	1 cut(s)	1185
AclWI	GGATC	3 cut(s)	198, 839, 1552
AcsI	RAATTY	2 cut(s)	201, 694
AcuI	CTGAAG	2 cut(s)	731, 1431
AcyI	GRCGYC	1 cut(s)	2000
AfaI	GTAC	4 cut(s)	487, 595, 1073, 1420
AfiI	CCNNNNNNNGG	1 cut(s)	805
AgsI	TTSAA	8 cut(s)	729, 860, 1113, 1183, 1289, 1334, 1660, 2021
AhlI	ACTAGT	3 cut(s)	482, 1421, 1882
AluBI	AGCT	8 cut(s)	128, 257, 268, 1277, 1295, 1521, 1667, 1966
AluI	AGCT	8 cut(s)	128, 257, 268, 1277, 1295, 1521, 1667, 1966
Alw26I	GTCTC	4 cut(s)	397, 420, 487, 723
AlwI	GGATC	3 cut(s)	198, 839, 1552
AlwNI	CAGNNNCTG	1 cut(s)	1454
Ama87I	CYCGRG	1 cut(s)	6
ApeKI	GCWGC	4 cut(s)	268, 1121, 1235, 1966
ApoI	RAATTY	2 cut(s)	201, 694
AseI	ATTAAT	1 cut(s)	537
Asp700I	GAANNNNTTC	2 cut(s)	741, 1735
AspA2I	CCTAGG	1 cut(s)	209
AspLEI	GCGC	1 cut(s)	1011
AspS9I	GGNCC	1 cut(s)	92
AsuHPI	GGTGA	6 cut(s)	155, 197, 1078, 1461, 1542, 1990
AsuII	TTCGAA	1 cut(s)	224
AvaI	CYCGRG	1 cut(s)	6
AvaII	GGWCC	1 cut(s)	92
AvrII	CCTAGG	1 cut(s)	209
AxyI	CCTNAGG	1 cut(s)	587
BbsI	GAAGAC	1 cut(s)	1420
BbvI	GCAGC	4 cut(s)	255, 1108, 1222, 1953
BccI	CCATC	4 cut(s)	338, 994, 1241, 1568
BcoDI	GTCTC	4 cut(s)	397, 420, 487, 723
BcuI	ACTAGT	3 cut(s)	482, 1421, 1882
BfaI	CTAG	7 cut(s)	210, 272, 483, 921, 1422, 1497, 1883
BfmI	CTRYAG	1 cut(s)	1236
BfuAI	ACCTGC	1 cut(s)	2018
BglI	GCCNNNNNGGC	1 cut(s)	1219
BglII	AGATCT	1 cut(s)	739
BisI	GCNGC	4 cut(s)	269, 1122, 1236, 1967
BlnI	CCTAGG	1 cut(s)	209
BlsI	GCNGC	4 cut(s)	270, 1123, 1237, 1968
BmcAI	AGTACT	1 cut(s)	487
Bme18I	GGWCC	1 cut(s)	92
BmeT110I	CYCGRG	1 cut(s)	6
BmgT120I	GGNCC	1 cut(s)	92
BmiI	GGNNCC	1 cut(s)	304
BmsI	GCATC	5 cut(s)	148, 654, 971, 1141, 1933
BpiI	GAAGAC	1 cut(s)	1420
BpmI	CTGGAG	1 cut(s)	660
Bpu10I	CCTNAGC	1 cut(s)	1614
Bpu14I	TTCGAA	1 cut(s)	224
BpuEI	CTTGAG	5 cut(s)	1361, 1507, 1621, 1841, 1991
Bsa29I	ATCGAT	1 cut(s)	1742
BsaBI	GATNNNNATC	3 cut(s)	348, 843, 1779
BsaHI	GRCGYC	1 cut(s)	2000
BsaI	GGTCTC	1 cut(s)	723
BsaJI	CCNNGG	2 cut(s)	209, 1174
BsaXI	ACNNNNNCTCC	4 cut(s)	492, 522, 1361, 1391
Bsc4I	CCNNNNNNNGG	1 cut(s)	805
Bse1I	ACTGG	4 cut(s)	95, 234, 601, 2003
Bse21I	CCTNAGG	1 cut(s)	587
Bse3DI	GCAATG	3 cut(s)	304, 475, 1592
Bse8I	GATNNNNATC	3 cut(s)	348, 843, 1779
BseCI	ATCGAT	1 cut(s)	1742
BseDI	CCNNGG	2 cut(s)	209, 1174
BseGI	GGATG	4 cut(s)	814, 886, 1156, 1948
BseJI	GATNNNNATC	3 cut(s)	348, 843, 1779
BseLI	CCNNNNNNNGG	1 cut(s)	805
BseMI	GCAATG	3 cut(s)	304, 475, 1592
BseMII	CTCAG	4 cut(s)	578, 991, 1605, 1939
BseNI	ACTGG	4 cut(s)	95, 234, 601, 2003
BseRI	GAGGAG	3 cut(s)	882, 967, 1775
BseXI	GCAGC	4 cut(s)	255, 1108, 1222, 1953
BseYI	CCCAGC	1 cut(s)	128
BsgI	GTGCAG	1 cut(s)	731
Bsh1236I	CGCG	1 cut(s)	1011
BshVI	ATCGAT	1 cut(s)	1742
BsiHKCI	CYCGRG	1 cut(s)	6
BsiSI	CCGG	1 cut(s)	17
BslFI	GGGAC	1 cut(s)	1698
BslI	CCNNNNNNNGG	1 cut(s)	805
BsmAI	GTCTC	4 cut(s)	397, 420, 487, 723
BsmFI	GGGAC	1 cut(s)	1698
BsmI	GAATGC	7 cut(s)	220, 232, 891, 1104, 1237, 1365, 1564
Bso31I	GGTCTC	1 cut(s)	723
BsoBI	CYCGRG	1 cut(s)	6
Bsp119I	TTCGAA	1 cut(s)	224
Bsp143I	GATC	6 cut(s)	190, 739, 844, 1544, 1621, 1774
BspACI	CCGC	3 cut(s)	667, 1011, 1318
BspCNI	CTCAG	4 cut(s)	579, 990, 1606, 1938
BspDI	ATCGAT	1 cut(s)	1742
BspFNI	CGCG	1 cut(s)	1011
BspHI	TCATGA	2 cut(s)	1297, 1783
BspLI	GGNNCC	1 cut(s)	304
BspMAI	CTGCAG	1 cut(s)	1240
BspMI	ACCTGC	1 cut(s)	2018
BspPI	GGATC	3 cut(s)	198, 839, 1552
BspQI	GCTCTTC	1 cut(s)	881
BspT104I	TTCGAA	1 cut(s)	224
BspTNI	GGTCTC	1 cut(s)	723
BsrBI	CCGCTC	1 cut(s)	1318
BsrDI	GCAATG	3 cut(s)	304, 475, 1592
BsrI	ACTGG	4 cut(s)	95, 234, 601, 2003
BssECI	CCNNGG	2 cut(s)	209, 1174
BssMI	GATC	6 cut(s)	190, 739, 844, 1544, 1621, 1774
BssNI	GRCGYC	1 cut(s)	2000
BssT1I	CCWWGG	2 cut(s)	209, 1174
Bst4CI	ACNGT	2 cut(s)	408, 1583
Bst6I	CTCTTC	2 cut(s)	881, 1839
BstACI	GRCGYC	1 cut(s)	2000
BstAPI	GCANNNNNTGC	1 cut(s)	1598
BstBI	TTCGAA	1 cut(s)	224
BstC8I	GCNNGC	7 cut(s)	113, 669, 1013, 1156, 1240, 1519, 1599
BstDEI	CTNAG	4 cut(s)	587, 977, 1614, 1925
BstENI	CCTNNNNNAGG	1 cut(s)	803
BstF5I	GGATG	4 cut(s)	814, 886, 1156, 1948
BstFNI	CGCG	1 cut(s)	1011
BstHHI	GCGC	1 cut(s)	1011
BstKTI	GATC	6 cut(s)	193, 742, 847, 1547, 1624, 1777
BstMAI	GTCTC	4 cut(s)	397, 420, 487, 723
BstMBI	GATC	6 cut(s)	190, 739, 844, 1544, 1621, 1774
BstMWI	GCNNNNNNNGC	5 cut(s)	167, 254, 1219, 1598, 1952
BstNSI	RCATGY	2 cut(s)	415, 1601
BstSFI	CTRYAG	1 cut(s)	1236
BstUI	CGCG	1 cut(s)	1011
BstV1I	GCAGC	4 cut(s)	255, 1108, 1222, 1953
BstV2I	GAAGAC	1 cut(s)	1420
BstX2I	RGATCY	1 cut(s)	739
BstXI	CCANNNNNNTGG	2 cut(s)	684, 1397
BstYI	RGATCY	1 cut(s)	739
Bsu15I	ATCGAT	1 cut(s)	1742
Bsu36I	CCTNAGG	1 cut(s)	587
BsuTUI	ATCGAT	1 cut(s)	1742
BtsCI	GGATG	4 cut(s)	814, 886, 1156, 1948
BtsI	GCAGTG	2 cut(s)	719, 1249
BtsIMutI	CAGTG	4 cut(s)	413, 719, 1249, 2010
BveI	ACCTGC	1 cut(s)	2018
Cac8I	GCNNGC	7 cut(s)	113, 669, 1013, 1156, 1240, 1519, 1599
CaiI	CAGNNNCTG	1 cut(s)	1454
CciI	TCATGA	2 cut(s)	1297, 1783
CfoI	GCGC	1 cut(s)	1011
Cfr13I	GGNCC	1 cut(s)	92
ClaI	ATCGAT	1 cut(s)	1742
CseI	GACGC	2 cut(s)	1617, 2008
Csp6I	GTAC	4 cut(s)	486, 594, 1072, 1419
CviQI	GTAC	4 cut(s)	486, 594, 1072, 1419
DdeI	CTNAG	4 cut(s)	587, 977, 1614, 1925
DpnI	GATC	6 cut(s)	192, 741, 846, 1546, 1623, 1776
DpnII	GATC	6 cut(s)	190, 739, 844, 1544, 1621, 1774
Eam1104I	CTCTTC	2 cut(s)	881, 1839
EarI	CTCTTC	2 cut(s)	881, 1839
Eco130I	CCWWGG	2 cut(s)	209, 1174
Eco31I	GGTCTC	1 cut(s)	723
Eco32I	GATATC	2 cut(s)	1021, 1171
Eco47I	GGWCC	1 cut(s)	92
Eco57I	CTGAAG	2 cut(s)	731, 1431
Eco81I	CCTNAGG	1 cut(s)	587
Eco88I	CYCGRG	1 cut(s)	6
EcoNI	CCTNNNNNAGG	1 cut(s)	803
EcoRI	GAATTC	1 cut(s)	201
EcoRV	GATATC	2 cut(s)	1021, 1171
EcoT14I	CCWWGG	2 cut(s)	209, 1174
EcoT22I	ATGCAT	1 cut(s)	964
ErhI	CCWWGG	2 cut(s)	209, 1174
FaqI	GGGAC	1 cut(s)	1698
FauI	CCCGC	2 cut(s)	660, 1004
Fnu4HI	GCNGC	4 cut(s)	269, 1122, 1236, 1967
FokI	GGATG	4 cut(s)	821, 893, 1163, 1955
Fsp4HI	GCNGC	4 cut(s)	269, 1122, 1236, 1967
FspBI	CTAG	7 cut(s)	210, 272, 483, 921, 1422, 1497, 1883
GlaI	GCGC	1 cut(s)	1010
GluI	GCNGC	4 cut(s)	269, 1122, 1236, 1967
GsaI	CCCAGC	1 cut(s)	132
GsuI	CTGGAG	1 cut(s)	660
HapII	CCGG	1 cut(s)	17
HgaI	GACGC	2 cut(s)	1617, 2008
HhaI	GCGC	1 cut(s)	1011
Hin1I	GRCGYC	1 cut(s)	2000
Hin6I	GCGC	1 cut(s)	1009
HinP1I	GCGC	1 cut(s)	1009
HincII	GTYRAC	1 cut(s)	874
HindII	GTYRAC	1 cut(s)	874
HpaII	CCGG	1 cut(s)	17
HphI	GGTGA	6 cut(s)	155, 197, 1078, 1461, 1542, 1990
Hpy166II	GTNNAC	1 cut(s)	874
Hpy188I	TCNGA	6 cut(s)	354, 897, 1456, 1482, 1633, 1878
Hpy8I	GTNNAC	1 cut(s)	874
HpyAV	CCTTC	7 cut(s)	809, 1054, 1141, 1819, 1969, 1985, 1989
HpyCH4III	ACNGT	2 cut(s)	408, 1583
HpyCH4IV	ACGT	4 cut(s)	26, 1070, 1185, 1417
HpyF10VI	GCNNNNNNNGC	5 cut(s)	167, 254, 1219, 1598, 1952
HpyF3I	CTNAG	4 cut(s)	587, 977, 1614, 1925
HpySE526I	ACGT	4 cut(s)	26, 1070, 1185, 1417
Hsp92I	GRCGYC	1 cut(s)	2000
HspAI	GCGC	1 cut(s)	1009
Kzo9I	GATC	6 cut(s)	190, 739, 844, 1544, 1621, 1774
LguI	GCTCTTC	1 cut(s)	881
LmnI	GCTCC	4 cut(s)	254, 302, 500, 1411
Lsp1109I	GCAGC	4 cut(s)	255, 1108, 1222, 1953
LweI	GCATC	5 cut(s)	148, 654, 971, 1141, 1933
MaeI	CTAG	7 cut(s)	210, 272, 483, 921, 1422, 1497, 1883
MaeII	ACGT	4 cut(s)	26, 1070, 1185, 1417
MaeIII	GTNAC	8 cut(s)	31, 143, 236, 1066, 1129, 1424, 1690, 2005
MalI	GATC	6 cut(s)	192, 741, 846, 1546, 1623, 1776
MbiI	CCGCTC	1 cut(s)	1318
MboI	GATC	6 cut(s)	190, 739, 844, 1544, 1621, 1774
MfeI	CAATTG	1 cut(s)	453
MflI	RGATCY	1 cut(s)	739
MlyI	GAGTC	6 cut(s)	14, 382, 879, 1126, 1628, 1917
MmeI	TCCRAC	3 cut(s)	632, 1251, 1830
Mph1103I	ATGCAT	1 cut(s)	964
MroXI	GAANNNNTTC	2 cut(s)	741, 1735
MseI	TTAA	8 cut(s)	315, 477, 537, 756, 932, 1209, 1608, 1809
MslI	CAYNNNNRTG	3 cut(s)	225, 896, 1052
MspI	CCGG	1 cut(s)	17
MunI	CAATTG	1 cut(s)	453
Mva1269I	GAATGC	7 cut(s)	220, 232, 891, 1104, 1237, 1365, 1564
MvnI	CGCG	1 cut(s)	1011
MwoI	GCNNNNNNNGC	5 cut(s)	167, 254, 1219, 1598, 1952
NdeII	GATC	6 cut(s)	190, 739, 844, 1544, 1621, 1774
NlaIV	GGNNCC	1 cut(s)	304
NmuCI	GTSAC	8 cut(s)	31, 143, 236, 1066, 1129, 1424, 1690, 2005
NsiI	ATGCAT	1 cut(s)	964
NspI	RCATGY	2 cut(s)	415, 1601
NspV	TTCGAA	1 cut(s)	224
PaeI	GCATGC	1 cut(s)	1601
PagI	TCATGA	2 cut(s)	1297, 1783
PciSI	GCTCTTC	1 cut(s)	881
PctI	GAATGC	7 cut(s)	220, 232, 891, 1104, 1237, 1365, 1564
PdmI	GAANNNNTTC	2 cut(s)	741, 1735
PfeI	GAWTC	4 cut(s)	999, 1109, 1442, 1736
PkrI	GCNGC	4 cut(s)	270, 1123, 1237, 1968
PleI	GAGTC	6 cut(s)	14, 382, 878, 1126, 1628, 1917
PpsI	GAGTC	6 cut(s)	14, 382, 878, 1126, 1628, 1917
PshBI	ATTAAT	1 cut(s)	537
Psp1406I	AACGTT	1 cut(s)	1185
PspFI	CCCAGC	1 cut(s)	128
PspN4I	GGNNCC	1 cut(s)	304
PspPI	GGNCC	1 cut(s)	92
PstI	CTGCAG	1 cut(s)	1240
PstNI	CAGNNNCTG	1 cut(s)	1454
PsuI	RGATCY	1 cut(s)	739
RsaI	GTAC	4 cut(s)	487, 595, 1073, 1420
RsaNI	GTAC	4 cut(s)	486, 594, 1072, 1419
RseI	CAYNNNNRTG	3 cut(s)	225, 896, 1052
SapI	GCTCTTC	1 cut(s)	881
SaqAI	TTAA	8 cut(s)	315, 477, 537, 756, 932, 1209, 1608, 1809
SatI	GCNGC	4 cut(s)	269, 1122, 1236, 1967
Sau3AI	GATC	6 cut(s)	190, 739, 844, 1544, 1621, 1774
Sau96I	GGNCC	1 cut(s)	92
ScaI	AGTACT	1 cut(s)	487
SchI	GAGTC	6 cut(s)	14, 382, 879, 1126, 1628, 1917
SfaNI	GCATC	5 cut(s)	148, 654, 971, 1141, 1933
SfcI	CTRYAG	1 cut(s)	1236
SfuI	TTCGAA	1 cut(s)	224
SinI	GGWCC	1 cut(s)	92
SmiMI	CAYNNNNRTG	3 cut(s)	225, 896, 1052
SmlI	CTYRAG	5 cut(s)	1340, 1522, 1636, 1820, 1970
SmoI	CTYRAG	5 cut(s)	1340, 1522, 1636, 1820, 1970
SpeI	ACTAGT	3 cut(s)	482, 1421, 1882
SphI	GCATGC	1 cut(s)	1601
SsiI	CCGC	3 cut(s)	667, 1011, 1318
SspI	AATATT	1 cut(s)	319
SspMI	CTAG	7 cut(s)	210, 272, 483, 921, 1422, 1497, 1883
StyI	CCWWGG	2 cut(s)	209, 1174
TaaI	ACNGT	2 cut(s)	408, 1583
TaiI	ACGT	4 cut(s)	29, 1073, 1188, 1420
TaqI	TCGA	5 cut(s)	224, 646, 940, 1718, 1742
TatI	WGTACW	1 cut(s)	485
TfiI	GAWTC	4 cut(s)	999, 1109, 1442, 1736
Tru1I	TTAA	8 cut(s)	315, 477, 537, 756, 932, 1209, 1608, 1809
Tru9I	TTAA	8 cut(s)	315, 477, 537, 756, 932, 1209, 1608, 1809
TscAI	CASTG	4 cut(s)	413, 719, 1249, 2010
TseFI	GTSAC	8 cut(s)	31, 143, 236, 1066, 1129, 1424, 1690, 2005
TseI	GCWGC	4 cut(s)	268, 1121, 1235, 1966
Tsp45I	GTSAC	8 cut(s)	31, 143, 236, 1066, 1129, 1424, 1690, 2005
TspDTI	ATGAA	5 cut(s)	89, 828, 936, 1728, 1800
TspGWI	ACGGA	4 cut(s)	52, 169, 796, 1955
TspRI	CASTG	4 cut(s)	413, 719, 1249, 2010
VpaK11BI	GGWCC	1 cut(s)	92
VspI	ATTAAT	1 cut(s)	537
XagI	CCTNNNNNAGG	1 cut(s)	803
XapI	RAATTY	2 cut(s)	201, 694
XbaI	TCTAGA	1 cut(s)	920
XceI	RCATGY	2 cut(s)	415, 1601
XmaJI	CCTAGG	1 cut(s)	209
XmnI	GAANNNNTTC	2 cut(s)	741, 1735
XspI	CTAG	7 cut(s)	210, 272, 483, 921, 1422, 1497, 1883
ZrmI	AGTACT	1 cut(s)	487
Zsp2I	ATGCAT	1 cut(s)	964

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.