Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0008406

Physical Location & Seq

Genomic Coordinates Reverse (-)

36856631 .. 36859963

Gene Structure 3333 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG167600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1443 bp

ATGCCCCTAAATCTCTTACCCAACTCTCTCCACTCCTCCACCTTCCCCCCATTTCCCAACAACTCCACTCACCACCCATGCCTTCCACTTCAGAAGCAGCCTCTTCGGGTCTCCTGCATTTCGACCCGCTTCAGAAGAAAACCCGGCACCCGGAAGTCCGACAACTCGGAGGCCCATGAGACGGTTCGTATGCTCATCCGAAGCTTCAGCGACCAAGAGCCCCTGGTCAAGTCTCTCAACAAGTACGTTAAGATTGTCAGGACCGAGCACTGCTTTCTTCTCTTTGAAGAGCTCGGCAAGTCTGACAAATGGCTTCAGTGCCTAGAGGTTTTCAGATGGATGCAAAAACAGCGGTGGTATGTTGCGGATAATGGTGTTTATTCCAAACTGATCTCGGTTATGGGAAAGAAGGGACAAACACGGATGGCTATGTGGTTGTTCTCTGAGATGCGGAATAGTGGGTGCCGCCCTGATACTTCTGTTTATAATGCACTCATCTCGGCCCACCTTAACAGCAAGGACAAAGGGAAGGCGTTGGAGAAAGCGCTCGTGTACTTTAACAAGATGAAGGGAATGGAAAGGTGTCAACCAAATATTGTTACGTACAATATTCTCTTGAGAGCTTTTGCGCAGAGTCGTAATGTAGAAAAAGTCAATTCTTTGTTTAAAGATCTTGATGAGAGCATAGCTTCCCCTGATATCTATACATACAATGGTGTAATGGATGCCTATGGGAAAAATGGGATGATCAGAGATATGGAATCTGTGCTTTCTCGCATGAAAAGTAATCAATGCAAGCCCGATACCATCACCTTCAACCTGTTGATTGATTCATACGGGAAGAAGCAGCAATTTGACAAGATGGAACAGGTATTTAAGAGCTTACTCCATTCCAAGGAGAGACCAACTCTCCCTACATTTAATTCAATGATCATAAATTATGGGAAGGCAAGGCTTAAAGAGCAAGCAGAATCTGTGTTTAAGAAGATGATTGACATGAAATACTCACCTAGCTTCATTACATATGAGAGTCTTATCATGATGTATGGCTACTGTGACTCTGTTTCAAAAGCTAGGGAGATATTTGATGGGGTGGCTGAATCTGGACAGGAGATGAAGGTGTCAACGTTTAATGTGATGCTTGATGTATACTGCAGGAATGGTTTGCCCATGGAAGCAGATAAGCTTTTGCTGAGTGCAAATAGTATTGGGATACGCCCAAATGTATCTACGTATAAACTTCTGTACAAGGCTTACACTAAAGCTAACATGAAGGAGCTTCTAGACAAATTGCTAAAGTCCATGGACAAAGATGGTATTGTCCCTAATAAGAGGTTCTTTCTAGAGGCGTTGGGAGCATTTTTGTCTTCAACAGGGAGTCCAGAGTCTGGGAGTGCCTCAACAGGTTTAAGCAGGCCACAGGATGAGGTGCTGAAAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000373 GO:0000375 GO:0000377 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0031425 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

480

Amino Acids

54.86

Weight (kDa)

9.42

Isoelectric Point (pI)

37.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	126 - 169	7e-09	PPR repeat family
PPR_long	PF17177	134 - 268	6.1e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	146 - 209	7.9e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	157 - 210	4.1e-10	PPR repeat family
PPR_3	PF13812	196 - 247	8.2e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	197 - 241	7.9e-10	PPR repeat family
PPR_3	PF13812	221 - 281	2.1e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	232 - 280	2.1e-12	PPR repeat family
PPR	PF01535	235 - 265	2.4e-06	PPR repeat
PPR_2	PF13041	267 - 311	1.3e-06	PPR repeat family
PPR_2	PF13041	374 - 419	3.6e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0008406)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39620 AT4G39620
fragaria_vesca	FvH4_4g12030 FvH4_4g12030
malus_domestica	MD03G1187700.v1.1 MD11G1203200.v1.1
prunus_persica	Prupe.4G236100_v2.0.a1
pyrus_communis	pycom03g14050 pycom11g17630
rosa_chinensis	RchiOBHm_Chr4g0409671
rosa_laevigata	RLG00000008536
rosa_multiflora	Rmu_co8330861.1_g000001 Rmu_sc0008746.1_g000016 Rmu_sc0015305.1_g000009
rosa_roxburghii	Rroxscaffold_5G00354190
rosa_rugosa	Rorug04G0095900 Rorug04G0096000
rosa_samantha	Rh4AG157400 Rh4BG157000 Rh4CG167600 Rh4DG151400
rosa_wichuraiana	Rw4G012880 Rw4G012990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	486
Acc16I	TGCGCA	1 cut(s)	630
AccB1I	GGYRCC	2 cut(s)	146, 462
AccB7I	CCANNNNNTGG	1 cut(s)	1388
AccI	GTMKAC	1 cut(s)	1149
AciI	CCGC	5 cut(s)	127, 352, 365, 451, 466
AclI	AACGTT	1 cut(s)	1127
AcsI	RAATTY	1 cut(s)	1437
AcuI	CTGAAG	4 cut(s)	74, 115, 190, 299
AfaI	GTAC	4 cut(s)	245, 554, 605, 1247
AfeI	AGCGCT	1 cut(s)	546
AfiI	CCNNNNNNNGG	4 cut(s)	150, 181, 895, 1388
AgsI	TTSAA	5 cut(s)	287, 817, 927, 1068, 1371
AjnI	CCWGG	1 cut(s)	222
Alw21I	GWGCWC	2 cut(s)	270, 294
Alw26I	GTCTC	4 cut(s)	115, 173, 237, 895
AlwNI	CAGNNNCTG	2 cut(s)	974, 1388
Aor51HI	AGCGCT	1 cut(s)	546
AoxI	GGCC	3 cut(s)	171, 501, 1415
ApeKI	GCWGC	2 cut(s)	97, 847
ApoI	RAATTY	1 cut(s)	1437
AspLEI	GCGC	2 cut(s)	547, 631
AspS9I	GGNCC	3 cut(s)	172, 261, 502
AsuC2I	CCSGG	2 cut(s)	144, 151
AsuHPI	GGTGA	3 cut(s)	62, 802, 999
AvaII	GGWCC	1 cut(s)	261
BaeI	ACNNNNGTAYC	2 cut(s)	465, 498
BanI	GGYRCC	2 cut(s)	146, 462
BanII	GRGCYC	2 cut(s)	222, 294
BauI	CACGAG	1 cut(s)	548
BbsI	GAAGAC	1 cut(s)	1359
Bbv12I	GWGCWC	2 cut(s)	270, 294
BbvI	GCAGC	2 cut(s)	109, 859
BccI	CCATC	6 cut(s)	330, 418, 815, 856, 1082, 1307
BcgI	CGANNNNNNTGC	4 cut(s)	86, 120, 480, 514
BciT130I	CCWGG	1 cut(s)	224
BciVI	GTATCC	1 cut(s)	1206
BclI	TGATCA	2 cut(s)	747, 930
BcnI	CCSGG	2 cut(s)	144, 151
BcoDI	GTCTC	4 cut(s)	115, 173, 237, 895
BfaI	CTAG	5 cut(s)	323, 1011, 1074, 1283, 1343
BfmI	CTRYAG	1 cut(s)	1153
BfoI	RGCGCY	1 cut(s)	548
BfuI	GTATCC	1 cut(s)	1206
BglII	AGATCT	1 cut(s)	670
BisI	GCNGC	3 cut(s)	98, 466, 848
BlsI	GCNGC	3 cut(s)	99, 467, 849
Bme1390I	CCNGG	3 cut(s)	144, 151, 224
Bme18I	GGWCC	1 cut(s)	261
BmgT120I	GGNCC	3 cut(s)	172, 261, 502
BmiI	GGNNCC	2 cut(s)	148, 464
BmrFI	CCNGG	3 cut(s)	144, 151, 224
BmsI	GCATC	4 cut(s)	330, 438, 715, 1128
BpiI	GAAGAC	1 cut(s)	1359
BplI	GAGNNNNNCTC	2 cut(s)	892, 924
BpuEI	CTTGAG	1 cut(s)	637
BpuMI	CCSGG	2 cut(s)	144, 151
BsaAI	YACGTR	2 cut(s)	603, 1233
BsaI	GGTCTC	2 cut(s)	115, 895
BsaJI	CCNNGG	4 cut(s)	222, 894, 1170, 1302
BsaXI	ACNNNNNCTCC	2 cut(s)	894, 924
Bsc4I	CCNNNNNNNGG	4 cut(s)	150, 181, 895, 1388
BseBI	CCWGG	1 cut(s)	224
BseDI	CCNNGG	4 cut(s)	222, 894, 1170, 1302
BseGI	GGATG	6 cut(s)	195, 345, 429, 730, 750, 1429
BseLI	CCNNNNNNNGG	4 cut(s)	150, 181, 895, 1388
BseMII	CTCAG	2 cut(s)	435, 1184
BseRI	GAGGAG	1 cut(s)	25
BseXI	GCAGC	2 cut(s)	109, 859
BshFI	GGCC	3 cut(s)	173, 503, 1417
BshNI	GGYRCC	2 cut(s)	146, 462
BsiHKAI	GWGCWC	2 cut(s)	270, 294
BsiSI	CCGG	2 cut(s)	144, 151
BslFI	GGGAC	2 cut(s)	426, 1307
BslI	CCNNNNNNNGG	4 cut(s)	150, 181, 895, 1388
BsmAI	GTCTC	4 cut(s)	115, 173, 237, 895
BsmBI	CGTCTC	1 cut(s)	173
BsmFI	GGGAC	2 cut(s)	426, 1307
BsnI	GGCC	3 cut(s)	173, 503, 1417
Bso31I	GGTCTC	2 cut(s)	115, 895
Bsp1286I	GDGCHC	3 cut(s)	222, 270, 294
Bsp1407I	TGTACA	1 cut(s)	1245
Bsp143I	GATC	4 cut(s)	390, 670, 747, 930
Bsp19I	CCATGG	2 cut(s)	1170, 1302
BspACI	CCGC	5 cut(s)	127, 352, 365, 451, 466
BspANI	GGCC	3 cut(s)	173, 503, 1417
BspCNI	CTCAG	2 cut(s)	436, 1185
BspHI	TCATGA	1 cut(s)	1038
BspLI	GGNNCC	2 cut(s)	148, 464
BspMAI	CTGCAG	1 cut(s)	1157
BspQI	GCTCTTC	1 cut(s)	282
BspT107I	GGYRCC	2 cut(s)	146, 462
BspTNI	GGTCTC	2 cut(s)	115, 895
BsrGI	TGTACA	1 cut(s)	1245
BssECI	CCNNGG	4 cut(s)	222, 894, 1170, 1302
BssMI	GATC	4 cut(s)	390, 670, 747, 930
BssNAI	GTATAC	1 cut(s)	1150
BssSI	CACGAG	1 cut(s)	548
BssT1I	CCWWGG	3 cut(s)	894, 1170, 1302
Bst1107I	GTATAC	1 cut(s)	1150
Bst2BI	CACGAG	1 cut(s)	548
Bst2UI	CCWGG	1 cut(s)	224
Bst4CI	ACNGT	2 cut(s)	184, 1055
Bst6I	CTCTTC	2 cut(s)	108, 282
BstAUI	TGTACA	1 cut(s)	1245
BstBAI	YACGTR	2 cut(s)	603, 1233
BstC8I	GCNNGC	3 cut(s)	797, 966, 1415
BstDEI	CTNAG	2 cut(s)	444, 1193
BstDSI	CCRYGG	2 cut(s)	1170, 1302
BstF5I	GGATG	6 cut(s)	195, 345, 429, 730, 750, 1429
BstH2I	RGCGCY	1 cut(s)	548
BstHHI	GCGC	2 cut(s)	547, 631
BstKTI	GATC	4 cut(s)	393, 673, 750, 933
BstMAI	GTCTC	4 cut(s)	115, 173, 237, 895
BstMBI	GATC	4 cut(s)	390, 670, 747, 930
BstMWI	GCNNNNNNNGC	3 cut(s)	349, 961, 1355
BstNI	CCWGG	1 cut(s)	224
BstSCI	CCNGG	3 cut(s)	142, 149, 222
BstSFI	CTRYAG	1 cut(s)	1153
BstSNI	TACGTA	2 cut(s)	603, 1233
BstV1I	GCAGC	2 cut(s)	109, 859
BstV2I	GAAGAC	1 cut(s)	1359
BstX2I	RGATCY	1 cut(s)	670
BstYI	RGATCY	1 cut(s)	670
BstZ17I	GTATAC	1 cut(s)	1150
BsuI	GTATCC	1 cut(s)	1206
BsuRI	GGCC	3 cut(s)	173, 503, 1417
BtgI	CCRYGG	2 cut(s)	1170, 1302
BtsCI	GGATG	6 cut(s)	195, 345, 429, 730, 750, 1429
BtsI	GCAGTG	1 cut(s)	268
BtsIMutI	CAGTG	2 cut(s)	268, 323
Cac8I	GCNNGC	3 cut(s)	797, 966, 1415
CaiI	CAGNNNCTG	2 cut(s)	974, 1388
CciI	TCATGA	1 cut(s)	1038
CfoI	GCGC	2 cut(s)	547, 631
Cfr13I	GGNCC	3 cut(s)	172, 261, 502
Csp6I	GTAC	4 cut(s)	244, 553, 604, 1246
CviAII	CATG	8 cut(s)	78, 176, 778, 997, 1039, 1171, 1270, 1303
CviQI	GTAC	4 cut(s)	244, 553, 604, 1246
DdeI	CTNAG	2 cut(s)	444, 1193
DpnI	GATC	4 cut(s)	392, 672, 749, 932
DpnII	GATC	4 cut(s)	390, 670, 747, 930
DraI	TTTAAA	1 cut(s)	667
Eam1104I	CTCTTC	2 cut(s)	108, 282
EarI	CTCTTC	2 cut(s)	108, 282
Ecl136II	GAGCTC	1 cut(s)	292
Eco105I	TACGTA	2 cut(s)	603, 1233
Eco130I	CCWWGG	3 cut(s)	894, 1170, 1302
Eco24I	GRGCYC	2 cut(s)	222, 294
Eco31I	GGTCTC	2 cut(s)	115, 895
Eco32I	GATATC	1 cut(s)	700
Eco47I	GGWCC	1 cut(s)	261
Eco47III	AGCGCT	1 cut(s)	546
Eco53kI	GAGCTC	1 cut(s)	292
Eco57I	CTGAAG	4 cut(s)	74, 115, 190, 299
EcoICRI	GAGCTC	1 cut(s)	292
EcoRII	CCWGG	1 cut(s)	222
EcoRV	GATATC	1 cut(s)	700
EcoT14I	CCWWGG	3 cut(s)	894, 1170, 1302
EcoT38I	GRGCYC	2 cut(s)	222, 294
ErhI	CCWWGG	3 cut(s)	894, 1170, 1302
Esp3I	CGTCTC	1 cut(s)	173
FaeI	CATG	8 cut(s)	81, 179, 781, 1000, 1042, 1174, 1273, 1306
FalI	AAGNNNNNCTT	2 cut(s)	1322, 1354
FaqI	GGGAC	2 cut(s)	426, 1307
FatI	CATG	8 cut(s)	77, 175, 777, 996, 1038, 1170, 1269, 1302
FauI	CCCGC	1 cut(s)	134
FauNDI	CATATG	1 cut(s)	1024
FbaI	TGATCA	2 cut(s)	747, 930
FblI	GTMKAC	1 cut(s)	1149
Fnu4HI	GCNGC	3 cut(s)	98, 466, 848
FokI	GGATG	6 cut(s)	182, 352, 436, 737, 757, 1436
FriOI	GRGCYC	2 cut(s)	222, 294
Fsp4HI	GCNGC	3 cut(s)	98, 466, 848
FspBI	CTAG	5 cut(s)	323, 1011, 1074, 1283, 1343
FspI	TGCGCA	1 cut(s)	630
GlaI	GCGC	2 cut(s)	546, 630
GluI	GCNGC	3 cut(s)	98, 466, 848
HaeII	RGCGCY	1 cut(s)	548
HaeIII	GGCC	3 cut(s)	173, 503, 1417
HapII	CCGG	2 cut(s)	144, 151
HhaI	GCGC	2 cut(s)	547, 631
Hin1II	CATG	8 cut(s)	81, 179, 781, 1000, 1042, 1174, 1273, 1306
Hin6I	GCGC	2 cut(s)	545, 629
HinP1I	GCGC	2 cut(s)	545, 629
HincII	GTYRAC	2 cut(s)	587, 1125
HindII	GTYRAC	2 cut(s)	587, 1125
HindIII	AAGCTT	2 cut(s)	202, 1184
HinfI	GANTC	9 cut(s)	634, 761, 830, 971, 1030, 1058, 1100, 1378, 1385
HpaII	CCGG	2 cut(s)	144, 151
HphI	GGTGA	3 cut(s)	62, 802, 999
Hpy166II	GTNNAC	4 cut(s)	553, 587, 1125, 1150
Hpy188I	TCNGA	9 cut(s)	93, 134, 160, 169, 200, 304, 335, 445, 752
Hpy188III	TCNNGA	8 cut(s)	259, 616, 674, 1039, 1104, 1283, 1343, 1382
Hpy8I	GTNNAC	4 cut(s)	553, 587, 1125, 1150
HpyAV	CCTTC	9 cut(s)	52, 92, 403, 523, 562, 823, 940, 1111, 1267
HpyCH4III	ACNGT	2 cut(s)	184, 1055
HpyCH4IV	ACGT	4 cut(s)	246, 602, 1127, 1232
HpyCH4V	TGCA	6 cut(s)	117, 343, 491, 795, 1155, 1199
HpyF10VI	GCNNNNNNNGC	3 cut(s)	349, 961, 1355
HpyF3I	CTNAG	2 cut(s)	444, 1193
HpySE526I	ACGT	4 cut(s)	246, 602, 1127, 1232
Hsp92II	CATG	8 cut(s)	81, 179, 781, 1000, 1042, 1174, 1273, 1306
HspAI	GCGC	2 cut(s)	545, 629
Ksp22I	TGATCA	2 cut(s)	747, 930
Kzo9I	GATC	4 cut(s)	390, 670, 747, 930
LguI	GCTCTTC	1 cut(s)	282
LmnI	GCTCC	2 cut(s)	1276, 1355
Lsp1109I	GCAGC	2 cut(s)	109, 859
LweI	GCATC	4 cut(s)	330, 438, 715, 1128
MaeI	CTAG	5 cut(s)	323, 1011, 1074, 1283, 1343
MaeII	ACGT	4 cut(s)	246, 602, 1127, 1232
MaeIII	GTNAC	2 cut(s)	598, 1055
MalI	GATC	4 cut(s)	392, 672, 749, 932
MboI	GATC	4 cut(s)	390, 670, 747, 930
MboII	GAAGA	7 cut(s)	95, 147, 269, 299, 853, 997, 1359
MflI	RGATCY	1 cut(s)	670
MhlI	GDGCHC	3 cut(s)	222, 270, 294
MluCI	AATT	6 cut(s)	655, 851, 922, 937, 1289, 1437
MlyI	GAGTC	5 cut(s)	643, 1039, 1052, 1387, 1394
MmeI	TCCRAC	2 cut(s)	183, 516
MnlI	CCTC	8 cut(s)	46, 111, 163, 319, 1326, 1339, 1408, 1420
MspA1I	CMGCKG	1 cut(s)	352
MspI	CCGG	2 cut(s)	144, 151
MspR9I	CCNGG	3 cut(s)	144, 151, 224
MvaI	CCWGG	1 cut(s)	224
MwoI	GCNNNNNNNGC	3 cut(s)	349, 961, 1355
NciI	CCSGG	2 cut(s)	144, 151
NcoI	CCATGG	2 cut(s)	1170, 1302
NdeI	CATATG	1 cut(s)	1024
NdeII	GATC	4 cut(s)	390, 670, 747, 930
NlaIII	CATG	8 cut(s)	81, 179, 781, 1000, 1042, 1174, 1273, 1306
NlaIV	GGNNCC	2 cut(s)	148, 464
NmeAIII	GCCGAG	2 cut(s)	273, 479
NmuCI	GTSAC	1 cut(s)	1055
NsbI	TGCGCA	1 cut(s)	630
PagI	TCATGA	1 cut(s)	1038
PciSI	GCTCTTC	1 cut(s)	282
PfeI	GAWTC	4 cut(s)	761, 830, 971, 1100
PflMI	CCANNNNNTGG	1 cut(s)	1388
PkrI	GCNGC	3 cut(s)	99, 467, 849
PleI	GAGTC	5 cut(s)	642, 1038, 1052, 1386, 1393
PpsI	GAGTC	5 cut(s)	642, 1038, 1052, 1386, 1393
Ppu21I	YACGTR	2 cut(s)	603, 1233
PsiI	TTATAA	1 cut(s)	486
Psp124BI	GAGCTC	1 cut(s)	294
Psp1406I	AACGTT	1 cut(s)	1127
Psp6I	CCWGG	1 cut(s)	222
PspGI	CCWGG	1 cut(s)	222
PspN4I	GGNNCC	2 cut(s)	148, 464
PspPI	GGNCC	3 cut(s)	172, 261, 502
PstI	CTGCAG	1 cut(s)	1157
PstNI	CAGNNNCTG	2 cut(s)	974, 1388
PsuI	RGATCY	1 cut(s)	670
RsaI	GTAC	4 cut(s)	245, 554, 605, 1247
RsaNI	GTAC	4 cut(s)	244, 553, 604, 1246
SacI	GAGCTC	1 cut(s)	294
SapI	GCTCTTC	1 cut(s)	282
SatI	GCNGC	3 cut(s)	98, 466, 848
Sau3AI	GATC	4 cut(s)	390, 670, 747, 930
Sau96I	GGNCC	3 cut(s)	172, 261, 502
SchI	GAGTC	5 cut(s)	643, 1039, 1052, 1387, 1394
ScrFI	CCNGG	3 cut(s)	144, 151, 224
SduI	GDGCHC	3 cut(s)	222, 270, 294
SfaNI	GCATC	4 cut(s)	330, 438, 715, 1128
SfcI	CTRYAG	1 cut(s)	1153
SinI	GGWCC	1 cut(s)	261
SmlI	CTYRAG	1 cut(s)	616
SmoI	CTYRAG	1 cut(s)	616
SnaBI	TACGTA	2 cut(s)	603, 1233
Sse9I	AATT	6 cut(s)	655, 851, 922, 937, 1289, 1437
SsiI	CCGC	5 cut(s)	127, 352, 365, 451, 466
SspI	AATATT	2 cut(s)	595, 610
SspMI	CTAG	5 cut(s)	323, 1011, 1074, 1283, 1343
SstI	GAGCTC	1 cut(s)	294
StyD4I	CCNGG	3 cut(s)	142, 149, 222
StyI	CCWWGG	3 cut(s)	894, 1170, 1302
TaaI	ACNGT	2 cut(s)	184, 1055
TaiI	ACGT	4 cut(s)	249, 605, 1130, 1235
TaqI	TCGA	1 cut(s)	122
TaqII	GACCGA	1 cut(s)	278
TasI	AATT	6 cut(s)	655, 851, 922, 937, 1289, 1437
TatI	WGTACW	2 cut(s)	552, 1245
TauI	GCSGC	1 cut(s)	468
TfiI	GAWTC	4 cut(s)	761, 830, 971, 1100
TscAI	CASTG	2 cut(s)	275, 323
TseFI	GTSAC	1 cut(s)	1055
TseI	GCWGC	2 cut(s)	97, 847
Tsp45I	GTSAC	1 cut(s)	1055
TspDTI	ATGAA	7 cut(s)	581, 794, 822, 1006, 1013, 1130, 1286
TspGWI	ACGGA	1 cut(s)	436
TspRI	CASTG	2 cut(s)	275, 323
Van91I	CCANNNNNTGG	1 cut(s)	1388
VpaK11BI	GGWCC	1 cut(s)	261
XapI	RAATTY	1 cut(s)	1437
XbaI	TCTAGA	2 cut(s)	1282, 1342
XmiI	GTMKAC	1 cut(s)	1149
XspI	CTAG	5 cut(s)	323, 1011, 1074, 1283, 1343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.