Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0015255

Physical Location & Seq

Genomic Coordinates Reverse (-)

35679809 .. 35682116

Gene Structure 2308 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG179400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGATGGGTAGCACCATCTTGTCTCTGTGCCACAAAGACACAACCTTTAACCATTTGAAGCAAATTCACTCCCTCCTCATTACCCTTGGCCCATCACAAAACGATTGCTTGCTCCCCAAGCTTCTCACTTCCATTGCACCCACCTCTAAGCCCACCCATCTTGCCTACGCTTCCTTCCTCACTGACCATGTACAAGCACCCACCTCCACTCACCTATGGAACTCCATCATCAGAGCATTTTCTACTACTTCGGAGCCTCACAGGTCCCTAGTTTCGTATTCAACAATGCGCCGAAACGGGGTCGTTCCGGACCAGCACACCTTCCCATTGCTACTCAAGGCCTTTCCCAAGTTGAAAAACAAAGACCCATTTCAGTTTTATGCTCATACAGTGAAATTTGGATTGAATTTGGATCAGTTTGTGGGGAATTCGTTTATATCTGTGTTGTCTGGTTGTGGGTACTTGGAGGCTGCACACCAGGTGTTTGTTGAAAGTGCTGAGAATGATGTGATTGCTTGGACGGCGTTGGTTGATGGGTATGTTAAGAATGGTCATGCTTTGGAAGCAATGAAGTGTTTTGTGGAGATGGGATTGGTTGGAATTAGGGTCGATGAGGTGACTGTTGTTAGTGCTCTTTGTGCTGCTGGAATGGCCGGTGATGTTTGGTTCGGGCGGTGCGTTCATGGGTTCTATGTGGAAGCAGGCAGGGTAAAATGGGATGTCTTTGTTGGTAGTGCTCTTGTTGATATGTACATGAAGTGTGGCTGCCATGACGATGCTCGAAAAGTGTTTAGTGCCATGCCGAGTAAAAATGTGGTATCTTGGACTGCGTTGATAGCGGGTTATGTGCAATGTGAGAAATATAAAGATGCACTGCTTGTCTTGAAATGTATGGTTTCGGAGGATGTCAAGCCTAACCAATCTACATTGTCGAGCGTACTTACCTCTTGTGCGCACGTAGGGGCATTGGATCAAGGAAAGTTGATCCATGGCTACATATATAGGCATAGAGTACAAGTGAACATGTTGCTTGGAACAGGGTTAGTAGATATGTATGCAAAATGTGGGTGCATTGTTAAGGCTCTATCGGTTTTCAGCAAGCTGCCCAGCAAGGATGTCTTTACATGGACTGCTATGATTAATGGGTTGGCATCACATGGGGATGCTCTAGGTGCTTTGAACTTATTCTCGCGGATGTTACAGAATGGGGTTCTACCCAATGAAGTAACCTTCATGGGTGTTCTTAGTGCGTGTGCTCATAGAGGCCTTGTAGATGAGGGACGCAAGGCTTTTGGATCAATGAAGCAAGTTTTCCATTTGGAGCCAAATTTAGATCACTACGGCTGTATGGTTGATTTACTTGGTAGGGCTGGGTACTTGGAGGAAGCCAGACAAATGATCGAGGACATGCCAATGTTGCCTACAGCTGGTATATGGGGAACTTTCCTTGGTGCTTGCGTGATTCACAAGAATTTTGAGCTAGGTGAACTTGCAGGAAGTCATTTGATCAAGCTAGATTCCAATCACAGTGGAAGATACGTACTGCTGGCAAACTTGTATTCAACTTGGAAAAAATGGAAAGTAGCTGCTGGCATCAGGAAGCTCATGAAAGGGAAAGGCGTTGAAAAAATACCAGGGTATAGCTGGATAGAAGTCAATGGTGCAATGTTCGAGTTTGCTGCGTTTGACAAATCACATTCCGAAACAGATCATATATATGTGATGTTGGAAAACATGCTTGTGCAGTTGAGACTCTCTGGTTATGTTCCCGATTCTAACCTACTAGCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

597

Amino Acids

65.8

Weight (kDa)

8.06

Isoelectric Point (pI)

25.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	169 - 208	1.1e-06	PPR repeat family
PPR_2	PF13041	270 - 319	3e-09	PPR repeat family
PPR_2	PF13041	371 - 420	3.2e-11	PPR repeat family
PPR	PF01535	374 - 404	6.8e-07	PPR repeat
E_motif	PF20431	489 - 551	3.9e-18	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015255)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50270
fragaria_vesca	FvH4_4g13480
malus_domestica	MD04G1013900.v1.1
prunus_persica	Prupe.1G160900_v2.0.a1
pyrus_communis	pycom04g01080
rosa_chinensis	RchiOBHm_Chr4g0414091
rosa_laevigata	RLG00000008178
rosa_multiflora	Rmu_sc0003264.1_g000012 Rmu_sc0006428.1_g000004
rosa_roxburghii	Rroxscaffold_5G00358020
rosa_rugosa	Rorug04G0125300
rosa_samantha	Rh4AG184000 Rh4BG183500 Rh4CG195900 Rh4DG179400
rosa_wichuraiana	Rw4G015660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	954
AccII	CGCG	1 cut(s)	1192
AccIII	TCCGGA	1 cut(s)	307
AciI	CCGC	3 cut(s)	673, 839, 1192
AclWI	GGATC	4 cut(s)	420, 978, 979, 1303
AcoI	YGGCCR	1 cut(s)	651
AcsI	RAATTY	6 cut(s)	63, 395, 406, 427, 1327, 1471
AdeI	CACNNNGTG	1 cut(s)	481
AfaI	GTAC	7 cut(s)	192, 461, 752, 939, 1014, 1376, 1542
AfiI	CCNNNNNNNGG	2 cut(s)	298, 1427
AflIII	ACRYGT	1 cut(s)	1023
AgsI	TTSAA	9 cut(s)	58, 282, 355, 406, 491, 886, 1180, 1563, 1625
AjnI	CCWGG	2 cut(s)	477, 1633
AluBI	AGCT	8 cut(s)	121, 1102, 1427, 1480, 1513, 1586, 1603, 1644
AluI	AGCT	8 cut(s)	121, 1102, 1427, 1480, 1513, 1586, 1603, 1644
Alw21I	GWGCWC	3 cut(s)	634, 739, 1258
Alw26I	GTCTC	2 cut(s)	27, 1744
AlwI	GGATC	4 cut(s)	420, 978, 979, 1303
Aor13HI	TCCGGA	1 cut(s)	307
AoxI	GGCC	4 cut(s)	88, 339, 651, 1264
ApeKI	GCWGC	6 cut(s)	470, 641, 765, 1102, 1586, 1679
ApoI	RAATTY	6 cut(s)	63, 395, 406, 427, 1327, 1471
AseI	ATTAAT	1 cut(s)	1140
Asp700I	GAANNNNTTC	1 cut(s)	1184
AspLEI	GCGC	2 cut(s)	291, 955
AspS9I	GGNCC	3 cut(s)	89, 264, 310
AsuHPI	GGTGA	4 cut(s)	203, 628, 668, 1496
AvaII	GGWCC	2 cut(s)	264, 310
Bbv12I	GWGCWC	3 cut(s)	634, 739, 1258
BbvI	GCAGC	6 cut(s)	457, 628, 752, 1089, 1573, 1666
BccI	CCATC	6 cut(s)	23, 100, 165, 233, 527, 580
BceAI	ACGGC	2 cut(s)	537, 1357
BcgI	CGANNNNNNTGC	2 cut(s)	1661, 1695
BciT130I	CCWGG	2 cut(s)	479, 1635
BclI	TGATCA	1 cut(s)	1506
BcoDI	GTCTC	2 cut(s)	27, 1744
BfaI	CTAG	5 cut(s)	269, 1169, 1481, 1514, 1784
BfmI	CTRYAG	1 cut(s)	1422
BisI	GCNGC	6 cut(s)	471, 642, 766, 1103, 1587, 1680
BlsI	GCNGC	6 cut(s)	472, 643, 767, 1104, 1588, 1681
Bme1390I	CCNGG	2 cut(s)	479, 1635
Bme18I	GGWCC	2 cut(s)	264, 310
BmgT120I	GGNCC	3 cut(s)	89, 264, 310
BmiI	GGNNCC	3 cut(s)	255, 266, 1323
BmrFI	CCNGG	2 cut(s)	479, 1635
BmsI	GCATC	5 cut(s)	766, 859, 1153, 1160, 1602
BpuEI	CTTGAG	1 cut(s)	320
BsaAI	YACGTR	2 cut(s)	958, 1540
BsaBI	GATNNNNATC	1 cut(s)	1521
BsaJI	CCNNGG	4 cut(s)	85, 988, 1447, 1634
BsaWI	WCCGGW	1 cut(s)	307
Bsc4I	CCNNNNNNNGG	2 cut(s)	298, 1427
Bse118I	RCCGGY	1 cut(s)	653
Bse3DI	GCAATG	5 cut(s)	132, 326, 573, 857, 1671
Bse8I	GATNNNNATC	1 cut(s)	1521
BseAI	TCCGGA	1 cut(s)	307
BseBI	CCWGG	2 cut(s)	479, 1635
BseDI	CCNNGG	4 cut(s)	85, 988, 1447, 1634
BseGI	GGATG	5 cut(s)	724, 910, 1120, 1168, 1200
BseJI	GATNNNNATC	1 cut(s)	1521
BseLI	CCNNNNNNNGG	2 cut(s)	298, 1427
BseMI	GCAATG	5 cut(s)	132, 326, 573, 857, 1671
BseMII	CTCAG	1 cut(s)	489
BseRI	GAGGAG	1 cut(s)	65
BseXI	GCAGC	6 cut(s)	457, 628, 752, 1089, 1573, 1666
BseYI	CCCAGC	2 cut(s)	1106, 1370
BsgI	GTGCAG	2 cut(s)	456, 1763
Bsh1236I	CGCG	1 cut(s)	1192
BshFI	GGCC	4 cut(s)	90, 341, 653, 1266
BsiHKAI	GWGCWC	3 cut(s)	634, 739, 1258
BsiSI	CCGG	2 cut(s)	308, 654
BslFI	GGGAC	2 cut(s)	250, 1293
BslI	CCNNNNNNNGG	2 cut(s)	298, 1427
BsmAI	GTCTC	2 cut(s)	27, 1744
BsmFI	GGGAC	2 cut(s)	250, 1293
BsnI	GGCC	4 cut(s)	90, 341, 653, 1266
Bsp1286I	GDGCHC	3 cut(s)	634, 739, 1258
Bsp13I	TCCGGA	1 cut(s)	307
Bsp1407I	TGTACA	2 cut(s)	190, 750
Bsp143I	GATC	8 cut(s)	412, 970, 984, 1295, 1333, 1398, 1506, 1708
Bsp19I	CCATGG	1 cut(s)	988
BspACI	CCGC	3 cut(s)	673, 839, 1192
BspANI	GGCC	4 cut(s)	90, 341, 653, 1266
BspCNI	CTCAG	1 cut(s)	490
BspEI	TCCGGA	1 cut(s)	307
BspFNI	CGCG	1 cut(s)	1192
BspHI	TCATGA	1 cut(s)	1605
BspLI	GGNNCC	3 cut(s)	255, 266, 1323
BspPI	GGATC	4 cut(s)	420, 978, 979, 1303
BsrDI	GCAATG	5 cut(s)	132, 326, 573, 857, 1671
BsrFI	RCCGGY	1 cut(s)	653
BsrGI	TGTACA	2 cut(s)	190, 750
BssAI	RCCGGY	1 cut(s)	653
BssECI	CCNNGG	4 cut(s)	85, 988, 1447, 1634
BssMI	GATC	8 cut(s)	412, 970, 984, 1295, 1333, 1398, 1506, 1708
BssT1I	CCWWGG	3 cut(s)	85, 988, 1447
Bst2UI	CCWGG	2 cut(s)	479, 1635
Bst4CI	ACNGT	3 cut(s)	391, 622, 1529
BstAUI	TGTACA	2 cut(s)	190, 750
BstBAI	YACGTR	2 cut(s)	958, 1540
BstC8I	GCNNGC	6 cut(s)	110, 703, 1100, 1456, 1548, 1591
BstDEI	CTNAG	3 cut(s)	147, 498, 1244
BstDSI	CCRYGG	1 cut(s)	988
BstF5I	GGATG	5 cut(s)	724, 910, 1120, 1168, 1200
BstFNI	CGCG	1 cut(s)	1192
BstHHI	GCGC	2 cut(s)	291, 955
BstKTI	GATC	8 cut(s)	415, 973, 987, 1298, 1336, 1401, 1509, 1711
BstMAI	GTCTC	2 cut(s)	27, 1744
BstMBI	GATC	8 cut(s)	412, 970, 984, 1295, 1333, 1398, 1506, 1708
BstMWI	GCNNNNNNNGC	8 cut(s)	118, 521, 563, 638, 650, 836, 1172, 1417
BstNI	CCWGG	2 cut(s)	479, 1635
BstNSI	RCATGY	3 cut(s)	1027, 1411, 1738
BstSCI	CCNGG	2 cut(s)	477, 1633
BstSFI	CTRYAG	1 cut(s)	1422
BstSNI	TACGTA	1 cut(s)	1540
BstUI	CGCG	1 cut(s)	1192
BstV1I	GCAGC	6 cut(s)	457, 628, 752, 1089, 1573, 1666
BsuRI	GGCC	4 cut(s)	90, 341, 653, 1266
BtgI	CCRYGG	1 cut(s)	988
BtsCI	GGATG	5 cut(s)	724, 910, 1120, 1168, 1200
BtsI	GCAGTG	1 cut(s)	872
BtsIMutI	CAGTG	4 cut(s)	180, 396, 872, 1534
Cac8I	GCNNGC	6 cut(s)	110, 703, 1100, 1456, 1548, 1591
CciI	TCATGA	1 cut(s)	1605
CfoI	GCGC	2 cut(s)	291, 955
Cfr10I	RCCGGY	1 cut(s)	653
Cfr13I	GGNCC	3 cut(s)	89, 264, 310
CseI	GACGC	1 cut(s)	1290
CsiI	ACCWGGT	1 cut(s)	477
Csp6I	GTAC	7 cut(s)	191, 460, 751, 938, 1013, 1375, 1541
CspCI	CAANNNNNGTGG	4 cut(s)	142, 177, 1510, 1545
CviQI	GTAC	7 cut(s)	191, 460, 751, 938, 1013, 1375, 1541
DdeI	CTNAG	3 cut(s)	147, 498, 1244
DpnI	GATC	8 cut(s)	414, 972, 986, 1297, 1335, 1400, 1508, 1710
DpnII	GATC	8 cut(s)	412, 970, 984, 1295, 1333, 1398, 1506, 1708
DraIII	CACNNNGTG	1 cut(s)	481
EaeI	YGGCCR	1 cut(s)	651
Eco105I	TACGTA	1 cut(s)	1540
Eco130I	CCWWGG	3 cut(s)	85, 988, 1447
Eco147I	AGGCCT	2 cut(s)	341, 1266
Eco47I	GGWCC	2 cut(s)	264, 310
EcoO109I	RGGNCCY	1 cut(s)	264
EcoRI	GAATTC	1 cut(s)	427
EcoRII	CCWGG	2 cut(s)	477, 1633
EcoT14I	CCWWGG	3 cut(s)	85, 988, 1447
ErhI	CCWWGG	3 cut(s)	85, 988, 1447
FalI	AAGNNNNNCTT	2 cut(s)	1103, 1135
FaqI	GGGAC	2 cut(s)	250, 1293
FauI	CCCGC	1 cut(s)	832
FbaI	TGATCA	1 cut(s)	1506
Fnu4HI	GCNGC	6 cut(s)	471, 642, 766, 1103, 1587, 1680
FokI	GGATG	5 cut(s)	731, 917, 1127, 1175, 1207
Fsp4HI	GCNGC	6 cut(s)	471, 642, 766, 1103, 1587, 1680
FspAI	RTGCGCAY	1 cut(s)	954
FspBI	CTAG	5 cut(s)	269, 1169, 1481, 1514, 1784
FspI	TGCGCA	1 cut(s)	954
GlaI	GCGC	2 cut(s)	290, 954
GluI	GCNGC	6 cut(s)	471, 642, 766, 1103, 1587, 1680
GsaI	CCCAGC	2 cut(s)	1110, 1374
HaeIII	GGCC	4 cut(s)	90, 341, 653, 1266
HapII	CCGG	2 cut(s)	308, 654
HgaI	GACGC	1 cut(s)	1290
HhaI	GCGC	2 cut(s)	291, 955
Hin6I	GCGC	2 cut(s)	289, 953
HinP1I	GCGC	2 cut(s)	289, 953
HindIII	AAGCTT	1 cut(s)	119
HinfI	GANTC	4 cut(s)	1462, 1517, 1752, 1772
HpaII	CCGG	2 cut(s)	308, 654
HphI	GGTGA	4 cut(s)	203, 628, 668, 1496
Hpy166II	GTNNAC	2 cut(s)	1021, 1487
Hpy188I	TCNGA	4 cut(s)	233, 253, 901, 1702
Hpy188III	TCNNGA	5 cut(s)	308, 883, 1597, 1606, 1769
Hpy8I	GTNNAC	2 cut(s)	1021, 1487
HpyAV	CCTTC	3 cut(s)	184, 331, 1240
HpyCH4III	ACNGT	3 cut(s)	391, 622, 1529
HpyCH4IV	ACGT	2 cut(s)	957, 1539
HpyCH4V	TGCA	9 cut(s)	137, 473, 850, 872, 1058, 1071, 1493, 1664, 1744
HpyF10VI	GCNNNNNNNGC	8 cut(s)	118, 521, 563, 638, 650, 836, 1172, 1417
HpyF3I	CTNAG	3 cut(s)	147, 498, 1244
HpySE526I	ACGT	2 cut(s)	957, 1539
HspAI	GCGC	2 cut(s)	289, 953
Kpn2I	TCCGGA	1 cut(s)	307
Ksp22I	TGATCA	1 cut(s)	1506
Kzo9I	GATC	8 cut(s)	412, 970, 984, 1295, 1333, 1398, 1506, 1708
LmnI	GCTCC	3 cut(s)	117, 253, 1321
Lsp1109I	GCAGC	6 cut(s)	457, 628, 752, 1089, 1573, 1666
LweI	GCATC	5 cut(s)	766, 859, 1153, 1160, 1602
MabI	ACCWGGT	1 cut(s)	477
MaeI	CTAG	5 cut(s)	269, 1169, 1481, 1514, 1784
MaeII	ACGT	2 cut(s)	957, 1539
MaeIII	GTNAC	3 cut(s)	616, 1197, 1225
MalI	GATC	8 cut(s)	414, 972, 986, 1297, 1335, 1400, 1508, 1710
MboI	GATC	8 cut(s)	412, 970, 984, 1295, 1333, 1398, 1506, 1708
MboII	GAAGA	1 cut(s)	1545
MhlI	GDGCHC	3 cut(s)	634, 739, 1258
MluCI	AATT	7 cut(s)	63, 395, 406, 427, 600, 1327, 1471
MlyI	GAGTC	1 cut(s)	1746
MmeI	TCCRAC	2 cut(s)	577, 1707
MroI	TCCGGA	1 cut(s)	307
MroXI	GAANNNNTTC	1 cut(s)	1184
MseI	TTAA	4 cut(s)	48, 543, 1077, 1140
MslI	CAYNNNNRTG	5 cut(s)	774, 1161, 1412, 1716, 1739
MspA1I	CMGCKG	1 cut(s)	1427
MspI	CCGG	2 cut(s)	308, 654
MspR9I	CCNGG	2 cut(s)	479, 1635
MvaI	CCWGG	2 cut(s)	479, 1635
MvnI	CGCG	1 cut(s)	1192
MwoI	GCNNNNNNNGC	8 cut(s)	118, 521, 563, 638, 650, 836, 1172, 1417
NcoI	CCATGG	1 cut(s)	988
NdeII	GATC	8 cut(s)	412, 970, 984, 1295, 1333, 1398, 1506, 1708
NlaIV	GGNNCC	3 cut(s)	255, 266, 1323
NmeAIII	GCCGAG	1 cut(s)	828
NmuCI	GTSAC	1 cut(s)	616
NsbI	TGCGCA	1 cut(s)	954
NspI	RCATGY	3 cut(s)	1027, 1411, 1738
PagI	TCATGA	1 cut(s)	1605
PceI	AGGCCT	2 cut(s)	341, 1266
PciI	ACATGT	1 cut(s)	1023
PcsI	WCGNNNNNNNCGW	1 cut(s)	675
PdmI	GAANNNNTTC	1 cut(s)	1184
PfeI	GAWTC	3 cut(s)	1462, 1517, 1772
PkrI	GCNGC	6 cut(s)	472, 643, 767, 1104, 1588, 1681
PleI	GAGTC	1 cut(s)	1746
PpsI	GAGTC	1 cut(s)	1746
Ppu21I	YACGTR	2 cut(s)	958, 1540
PpuMI	RGGWCCY	1 cut(s)	264
PscI	ACATGT	1 cut(s)	1023
PshBI	ATTAAT	1 cut(s)	1140
Psp5II	RGGWCCY	1 cut(s)	264
Psp6I	CCWGG	2 cut(s)	477, 1633
PspFI	CCCAGC	2 cut(s)	1106, 1370
PspGI	CCWGG	2 cut(s)	477, 1633
PspN4I	GGNNCC	3 cut(s)	255, 266, 1323
PspPI	GGNCC	3 cut(s)	89, 264, 310
PspPPI	RGGWCCY	1 cut(s)	264
PvuII	CAGCTG	1 cut(s)	1427
RsaI	GTAC	7 cut(s)	192, 461, 752, 939, 1014, 1376, 1542
RsaNI	GTAC	7 cut(s)	191, 460, 751, 938, 1013, 1375, 1541
RseI	CAYNNNNRTG	5 cut(s)	774, 1161, 1412, 1716, 1739
SaqAI	TTAA	4 cut(s)	48, 543, 1077, 1140
SatI	GCNGC	6 cut(s)	471, 642, 766, 1103, 1587, 1680
Sau3AI	GATC	8 cut(s)	412, 970, 984, 1295, 1333, 1398, 1506, 1708
Sau96I	GGNCC	3 cut(s)	89, 264, 310
SchI	GAGTC	1 cut(s)	1746
ScrFI	CCNGG	2 cut(s)	479, 1635
SduI	GDGCHC	3 cut(s)	634, 739, 1258
SexAI	ACCWGGT	1 cut(s)	477
SfaNI	GCATC	5 cut(s)	766, 859, 1153, 1160, 1602
SfcI	CTRYAG	1 cut(s)	1422
SinI	GGWCC	2 cut(s)	264, 310
SmiMI	CAYNNNNRTG	5 cut(s)	774, 1161, 1412, 1716, 1739
SmlI	CTYRAG	1 cut(s)	335
SmoI	CTYRAG	1 cut(s)	335
SnaBI	TACGTA	1 cut(s)	1540
Sse9I	AATT	7 cut(s)	63, 395, 406, 427, 600, 1327, 1471
SseBI	AGGCCT	2 cut(s)	341, 1266
SsiI	CCGC	3 cut(s)	673, 839, 1192
SspMI	CTAG	5 cut(s)	269, 1169, 1481, 1514, 1784
StuI	AGGCCT	2 cut(s)	341, 1266
StyD4I	CCNGG	2 cut(s)	477, 1633
StyI	CCWWGG	3 cut(s)	85, 988, 1447
TaaI	ACNGT	3 cut(s)	391, 622, 1529
TaiI	ACGT	2 cut(s)	960, 1542
TaqI	TCGA	5 cut(s)	609, 781, 932, 1401, 1671
TasI	AATT	7 cut(s)	63, 395, 406, 427, 600, 1327, 1471
TatI	WGTACW	3 cut(s)	190, 750, 1012
TfiI	GAWTC	3 cut(s)	1462, 1517, 1772
Tru1I	TTAA	4 cut(s)	48, 543, 1077, 1140
Tru9I	TTAA	4 cut(s)	48, 543, 1077, 1140
TscAI	CASTG	4 cut(s)	187, 396, 879, 1534
TseFI	GTSAC	1 cut(s)	616
TseI	GCWGC	6 cut(s)	470, 641, 765, 1102, 1586, 1679
Tsp45I	GTSAC	1 cut(s)	616
TspDTI	ATGAA	7 cut(s)	584, 671, 770, 1222, 1236, 1316, 1622
TspRI	CASTG	4 cut(s)	187, 396, 879, 1534
VpaK11BI	GGWCC	2 cut(s)	264, 310
VspI	ATTAAT	1 cut(s)	1140
XapI	RAATTY	6 cut(s)	63, 395, 406, 427, 1327, 1471
XceI	RCATGY	3 cut(s)	1027, 1411, 1738
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1641
XmnI	GAANNNNTTC	1 cut(s)	1184
XspI	CTAG	5 cut(s)	269, 1169, 1481, 1514, 1784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.