Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0013521

Physical Location & Seq

Genomic Coordinates Forward (+)

37467054 .. 37470481

Gene Structure 3428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG190400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGGGTGTCAAAGCCGGCTCCGTGATAAACCGACTTCTCTACGACAAAGGTCATCTAACCAAACCTTCCCACCCAACTGAAGCCAAAGCCGTAACCAACACAATCCTCACTCACCTCACTTCCGGCCGTCTCCGAAAAGCCGTCTCCATCCTCTTCTCTTCCCCATTCCCCTTCCACTTCTCCCTCTACGCCCATCTCTTCCATCTCTGCTCCTCCTCCCGCGCTGTTCTCGAGGCCCGCAAAGTCGAGTCCCATCTCGTCACCTTCTCCCCCACCCCGCCCATATTCCTCCTCAACCGCGCCATCGAGACCTACGCGAAATGTGGGTCCTTGGGAGACGCGCGGGAGCTGTTCGACGAAATGCCTCAGAGAGACGGTGGGTCTTGGAACGCCATGATCAAGGCGTATTCCCAAAGTGGGCGTCCCGAGGATGCTCTGGTTTCGTTTTTGGATATGAATAGAGCCGGGTTTTTGCCGAATGAGATTACTTTCGCTGGTGTTCTCGGCTCGTGTGCTGCCGTTTTGGAGTTTTGGGTTTCGAGGCAAGTTCATGGTCTTGTTGTGAAGTATGGTTTTGGCGGGAATGTGATTTTGGGGAGTTCGCTTGTTGATGTATATGGGAAGTGTGGGGTTATGAGTGATGCGAGGAGAGTGTTTGATGAGATGGAAAACCCGAATGATGTTTCTTGGAATATAATCGTGAGGAGGTATCTTGAGATGGGTGATGGAATGGAGGCGGTAATGATGTTTTTCCGGATGCTTGTGGCGGGAGTCAGGCCGTTGAAGTATACTTTTTCTAATGCTCTTGTTGCTTGTTCGAGTGCCTTTGCACTTGTGGAGGGGAAGCAGATACATGGAGTTGGGGTTAAAATGGGTTTTGAAGATGATGAGGTTGTTTTGTGCTCCCTCATCGATATGTATGTTAAATGCGGGAAGCTAGAACATGCTCATGCAATTTTTGACCAGCCCCATTCAAAAAACTTGATTTCTTGGACGTCAATTGTGTCTGGATATGCAATGAGTGGACAAACATGGAAGGCAAGGGAGTTGTTCAATGAAATGCCTGAACGGAATGTGATATCTTGGAATGCAATGTTGGCAGGGTATACTCGTTACTTCCAATGGGAAGAGGCGTTGGATTTTATATTTTTGATGCGGAACACCACCAAAGATATAGACCAGGTCACTCTTGGGTTGATCCTAAATGTATGTGCTGGCCTCTCAGATGTTGAAATGGGAAAACAGGTTCATGGATTCATTTACCGACATGGATTTTGTTCCAACCTCTTTGTTGGCAATGGTCTTCTCTACATGTATGGTCGATGTGGTAACTTGAGAAATTCCAAAACAGTCTGGTTTCACCAGATTAGTCCATCACGGGATACAGTTTCTTGGAATAGTTTGTTGACAAACTATGCTTCACATCATCTGAGTGAACTGGCAATGACAATCTTCTATGAGATGCAATGTGAGACAGCACCTAACGAGATTACATTTGCAACTCTCCTTTCAGCATGTGCAAATATTTTTGCTCTTCAGCAAGGCAAACAAATTCATGGTTTTATGATTAGAAATGGTTACATAATAGATACCGTGGTTAGAGGGGCTTTGGTTGACATGTATTCCAAGTGTCATTCTATTGAGTATGCTTTTATGGTTTTCAAAGGTGGGACTTCAAAAGATGTGATTCTTTGTAACTCCTTGATTTTGGGATGCTGTCACAATAATAGAACGAGACAGATATTTAAATTGTTTCGTTTGATGAAGGAAGAAGGAATTAAGCCAGATCATATCACATTTCGAGGCATTTTGTATGCATGTACTTCTGAAGGTCTTGTTGAGTTGGGAAAGCAGTATTTTGAATCAATGAGCAATGATTATGGTATTATACCTCGATTAGAGCACTATGAGTGCATGATTGAACTCTACAGCCAGAGTGGGTACATGGATGAGCTTGAAACCTTTGTAAGGAATATGCCATTTGATCCCACAGTCCCAATGTTAACAAGAGTTGTGGATGCTTGTAAAAGACATGGATGCCTGAGATTTGGACAATGGGCTGTTCAACGACTTAATAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

693

Amino Acids

78.08

Weight (kDa)

7.29

Isoelectric Point (pI)

43.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	128 - 172	2.1e-08	PPR repeat family
PPR	PF01535	329 - 359	1.7e-06	PPR repeat
PPR_2	PF13041	460 - 508	6.3e-07	PPR repeat family
PPR_2	PF13041	560 - 607	1.4e-11	PPR repeat family
PPR_3	PF13812	560 - 607	1.5e-06	Pentatricopeptide repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013521)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26540
fragaria_vesca	FvH4_4g16500 FvH4_4g16500 FvH4_4g16500 FvH4_4g16500
malus_domestica	MD10G1008400.v1.1
prunus_persica	Prupe.8G008000_v2.0.a1
pyrus_communis	pycom10g00510
rosa_chinensis	RchiOBHm_Chr4g0415151
rosa_laevigata	RLG00000008092
rosa_multiflora	Rmu_sc0003748.1_g000028
rosa_roxburghii	Rroxscaffold_5G00358960
rosa_rugosa	Rorug04G0132500
rosa_samantha	Rh4AG192500 Rh4BG190700 Rh4CG203400 Rh4DG190400
rosa_wichuraiana	Rw4G016370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	998
AccI	GTMKAC	2 cut(s)	788, 1106
AccII	CGCG	5 cut(s)	222, 300, 317, 341, 343
AccIII	TCCGGA	1 cut(s)	753
AclWI	GGATC	2 cut(s)	1192, 1979
AcoI	YGGCCR	1 cut(s)	124
AcsI	RAATTY	2 cut(s)	1339, 1551
AcuI	CTGAAG	3 cut(s)	99, 1520, 1848
AcyI	GRCGYC	2 cut(s)	421, 995
AfaI	GTAC	2 cut(s)	1822, 1943
AfiI	CCNNNNNNNGG	2 cut(s)	417, 1968
AflIII	ACRYGT	2 cut(s)	1311, 1617
AhdI	GACNNNNNGTC	1 cut(s)	379
AjnI	CCWGG	1 cut(s)	1179
AjuI	GAANNNNNNNTTGG	4 cut(s)	575, 607, 1079, 1111
AloI	GAACNNNNNNTCC	2 cut(s)	1230, 1262
AluBI	AGCT	3 cut(s)	349, 937, 1954
AluI	AGCT	3 cut(s)	349, 937, 1954
Alw21I	GWGCWC	2 cut(s)	905, 1905
Alw26I	GTCTC	7 cut(s)	134, 148, 302, 330, 366, 1466, 1729
AlwI	GGATC	2 cut(s)	1192, 1979
Ama87I	CYCGRG	2 cut(s)	230, 425
Aor13HI	TCCGGA	1 cut(s)	753
AoxI	GGCC	4 cut(s)	124, 234, 776, 1216
ApeKI	GCWGC	1 cut(s)	515
ApoI	RAATTY	2 cut(s)	1339, 1551
ArsI	GACNNNNNNTTYG	6 cut(s)	311, 343, 406, 438, 1257, 1289
AspLEI	GCGC	3 cut(s)	224, 302, 343
AspS9I	GGNCC	2 cut(s)	235, 327
AsuC2I	CCSGG	1 cut(s)	466
AsuHPI	GGTGA	4 cut(s)	104, 253, 734, 1352
AvaI	CYCGRG	2 cut(s)	230, 425
AvaII	GGWCC	1 cut(s)	327
BaeI	ACNNNNGTAYC	2 cut(s)	1581, 1614
BauI	CACGAG	1 cut(s)	508
BbsI	GAAGAC	1 cut(s)	1295
Bbv12I	GWGCWC	2 cut(s)	905, 1905
BbvI	GCAGC	1 cut(s)	502
BccI	CCATC	9 cut(s)	155, 201, 210, 261, 311, 658, 712, 719, 1381
BceAI	ACGGC	5 cut(s)	74, 111, 125, 503, 763
BciT130I	CCWGG	1 cut(s)	1181
BciVI	GTATCC	1 cut(s)	1375
BclI	TGATCA	1 cut(s)	396
BcnI	CCSGG	1 cut(s)	466
BcoDI	GTCTC	7 cut(s)	134, 148, 302, 330, 366, 1466, 1729
BfaI	CTAG	1 cut(s)	938
BfmI	CTRYAG	1 cut(s)	1927
BfuI	GTATCC	1 cut(s)	1375
BisI	GCNGC	1 cut(s)	516
BlsI	GCNGC	1 cut(s)	517
Bme1390I	CCNGG	2 cut(s)	466, 1181
Bme18I	GGWCC	1 cut(s)	327
BmeRI	GACNNNNNGTC	1 cut(s)	379
BmeT110I	CYCGRG	2 cut(s)	230, 425
BmgT120I	GGNCC	2 cut(s)	235, 327
BmiI	GGNNCC	2 cut(s)	19, 328
BmrFI	CCNGG	2 cut(s)	466, 1181
BmsI	GCATC	8 cut(s)	421, 631, 747, 1143, 1452, 1703, 2008, 2027
BoxI	GACNNNNGTC	1 cut(s)	48
BpiI	GAAGAC	1 cut(s)	1295
BpuEI	CTTGAG	2 cut(s)	734, 1354
BpuMI	CCSGG	1 cut(s)	466
Bsa29I	ATCGAT	1 cut(s)	912
BsaHI	GRCGYC	2 cut(s)	421, 995
BsaI	GGTCTC	1 cut(s)	302
BsaJI	CCNNGG	3 cut(s)	330, 426, 1593
BsaWI	WCCGGW	1 cut(s)	753
BsaXI	ACNNNNNCTCC	2 cut(s)	849, 879
Bsc4I	CCNNNNNNNGG	2 cut(s)	417, 1968
Bse118I	RCCGGY	1 cut(s)	14
Bse1I	ACTGG	1 cut(s)	1443
Bse3DI	GCAATG	6 cut(s)	1023, 1098, 1303, 1449, 1472, 1879
BseAI	TCCGGA	1 cut(s)	753
BseBI	CCWGG	1 cut(s)	1181
BseCI	ATCGAT	1 cut(s)	912
BseDI	CCNNGG	3 cut(s)	330, 426, 1593
BseGI	GGATG	7 cut(s)	147, 436, 762, 1718, 1954, 2023, 2042
BseLI	CCNNNNNNNGG	2 cut(s)	417, 1968
BseMI	GCAATG	6 cut(s)	1023, 1098, 1303, 1449, 1472, 1879
BseMII	CTCAG	4 cut(s)	380, 1236, 1421, 2033
BseNI	ACTGG	1 cut(s)	1443
BseRI	GAGGAG	5 cut(s)	202, 205, 281, 661, 718
BseX3I	CGGCCG	1 cut(s)	124
BseXI	GCAGC	1 cut(s)	502
Bsh1236I	CGCG	5 cut(s)	222, 300, 317, 341, 343
Bsh1285I	CGRYCG	1 cut(s)	127
BshFI	GGCC	4 cut(s)	126, 236, 778, 1218
BshVI	ATCGAT	1 cut(s)	912
BsiEI	CGRYCG	1 cut(s)	127
BsiHKAI	GWGCWC	2 cut(s)	905, 1905
BsiHKCI	CYCGRG	2 cut(s)	230, 425
BsiSI	CCGG	4 cut(s)	15, 123, 465, 754
BslFI	GGGAC	4 cut(s)	235, 408, 1684, 1979
BslI	CCNNNNNNNGG	2 cut(s)	417, 1968
BsmAI	GTCTC	7 cut(s)	134, 148, 302, 330, 366, 1466, 1729
BsmBI	CGTCTC	4 cut(s)	134, 148, 330, 366
BsmFI	GGGAC	4 cut(s)	235, 408, 1684, 1979
BsmI	GAATGC	1 cut(s)	1093
BsnI	GGCC	4 cut(s)	126, 236, 778, 1218
Bso31I	GGTCTC	1 cut(s)	302
BsoBI	CYCGRG	2 cut(s)	230, 425
Bsp1286I	GDGCHC	2 cut(s)	905, 1905
Bsp13I	TCCGGA	1 cut(s)	753
Bsp143I	GATC	4 cut(s)	396, 1197, 1786, 1984
BspANI	GGCC	4 cut(s)	126, 236, 778, 1218
BspCNI	CTCAG	4 cut(s)	379, 1235, 1422, 2034
BspDI	ATCGAT	1 cut(s)	912
BspEI	TCCGGA	1 cut(s)	753
BspFNI	CGCG	5 cut(s)	222, 300, 317, 341, 343
BspLI	GGNNCC	2 cut(s)	19, 328
BspPI	GGATC	2 cut(s)	1192, 1979
BspQI	GCTCTTC	1 cut(s)	1539
BspTNI	GGTCTC	1 cut(s)	302
BsrDI	GCAATG	6 cut(s)	1023, 1098, 1303, 1449, 1472, 1879
BsrFI	RCCGGY	1 cut(s)	14
BsrI	ACTGG	1 cut(s)	1443
BssAI	RCCGGY	1 cut(s)	14
BssECI	CCNNGG	3 cut(s)	330, 426, 1593
BssMI	GATC	4 cut(s)	396, 1197, 1786, 1984
BssNAI	GTATAC	2 cut(s)	789, 1107
BssNI	GRCGYC	2 cut(s)	421, 995
BssSI	CACGAG	1 cut(s)	508
BssT1I	CCWWGG	1 cut(s)	330
Bst1107I	GTATAC	2 cut(s)	789, 1107
Bst2BI	CACGAG	1 cut(s)	508
Bst2UI	CCWGG	1 cut(s)	1181
Bst4CI	ACNGT	5 cut(s)	377, 1351, 1387, 1594, 1993
Bst6I	CTCTTC	5 cut(s)	158, 163, 203, 1122, 1539
BstACI	GRCGYC	2 cut(s)	421, 995
BstC8I	GCNNGC	3 cut(s)	16, 238, 1216
BstDEI	CTNAG	4 cut(s)	366, 1222, 1430, 2042
BstDSI	CCRYGG	1 cut(s)	1593
BstENI	CCTNNNNNAGG	1 cut(s)	1966
BstF5I	GGATG	7 cut(s)	147, 436, 762, 1718, 1954, 2023, 2042
BstFNI	CGCG	5 cut(s)	222, 300, 317, 341, 343
BstHHI	GCGC	3 cut(s)	224, 302, 343
BstKTI	GATC	4 cut(s)	399, 1200, 1789, 1987
BstMAI	GTCTC	7 cut(s)	134, 148, 302, 330, 366, 1466, 1729
BstMBI	GATC	4 cut(s)	396, 1197, 1786, 1984
BstMCI	CGRYCG	1 cut(s)	127
BstMWI	GCNNNNNNNGC	2 cut(s)	809, 1097
BstNI	CCWGG	1 cut(s)	1181
BstNSI	RCATGY	5 cut(s)	947, 1315, 1518, 1621, 1821
BstPAI	GACNNNNGTC	1 cut(s)	48
BstSCI	CCNGG	2 cut(s)	464, 1179
BstSFI	CTRYAG	1 cut(s)	1927
BstUI	CGCG	5 cut(s)	222, 300, 317, 341, 343
BstV1I	GCAGC	1 cut(s)	502
BstV2I	GAAGAC	1 cut(s)	1295
BstZ17I	GTATAC	2 cut(s)	789, 1107
BstZI	CGGCCG	1 cut(s)	124
Bsu15I	ATCGAT	1 cut(s)	912
BsuI	GTATCC	1 cut(s)	1375
BsuRI	GGCC	4 cut(s)	126, 236, 778, 1218
BsuTUI	ATCGAT	1 cut(s)	912
BtgI	CCRYGG	1 cut(s)	1593
BtsCI	GGATG	7 cut(s)	147, 436, 762, 1718, 1954, 2023, 2042
Cac8I	GCNNGC	3 cut(s)	16, 238, 1216
CfoI	GCGC	3 cut(s)	224, 302, 343
Cfr10I	RCCGGY	1 cut(s)	14
Cfr13I	GGNCC	2 cut(s)	235, 327
ClaI	ATCGAT	1 cut(s)	912
CseI	GACGC	2 cut(s)	347, 410
CsiI	ACCWGGT	1 cut(s)	1179
Csp6I	GTAC	2 cut(s)	1821, 1942
CspCI	CAANNNNNGTGG	2 cut(s)	1995, 2030
CviQI	GTAC	2 cut(s)	1821, 1942
DdeI	CTNAG	4 cut(s)	366, 1222, 1430, 2042
DpnI	GATC	4 cut(s)	398, 1199, 1788, 1986
DpnII	GATC	4 cut(s)	396, 1197, 1786, 1984
DraI	TTTAAA	1 cut(s)	1747
DriI	GACNNNNNGTC	1 cut(s)	379
EaeI	YGGCCR	1 cut(s)	124
EagI	CGGCCG	1 cut(s)	124
Eam1104I	CTCTTC	5 cut(s)	158, 163, 203, 1122, 1539
Eam1105I	GACNNNNNGTC	1 cut(s)	379
EarI	CTCTTC	5 cut(s)	158, 163, 203, 1122, 1539
EclXI	CGGCCG	1 cut(s)	124
Eco130I	CCWWGG	1 cut(s)	330
Eco31I	GGTCTC	1 cut(s)	302
Eco32I	GATATC	1 cut(s)	1080
Eco47I	GGWCC	1 cut(s)	327
Eco52I	CGGCCG	1 cut(s)	124
Eco57I	CTGAAG	3 cut(s)	99, 1520, 1848
Eco88I	CYCGRG	2 cut(s)	230, 425
EcoNI	CCTNNNNNAGG	1 cut(s)	1966
EcoO109I	RGGNCCY	1 cut(s)	327
EcoRII	CCWGG	1 cut(s)	1179
EcoRV	GATATC	1 cut(s)	1080
EcoT14I	CCWWGG	1 cut(s)	330
EcoT22I	ATGCAT	1 cut(s)	1819
ErhI	CCWWGG	1 cut(s)	330
Esp3I	CGTCTC	4 cut(s)	134, 148, 330, 366
FaqI	GGGAC	4 cut(s)	235, 408, 1684, 1979
FauI	CCCGC	7 cut(s)	227, 245, 285, 336, 572, 760, 923
FbaI	TGATCA	1 cut(s)	396
FblI	GTMKAC	2 cut(s)	788, 1106
Fnu4HI	GCNGC	1 cut(s)	516
FokI	GGATG	7 cut(s)	134, 443, 769, 1725, 1961, 2030, 2049
Fsp4HI	GCNGC	1 cut(s)	516
FspBI	CTAG	1 cut(s)	938
GlaI	GCGC	3 cut(s)	223, 301, 342
GluI	GCNGC	1 cut(s)	516
HaeIII	GGCC	4 cut(s)	126, 236, 778, 1218
HapII	CCGG	4 cut(s)	15, 123, 465, 754
HgaI	GACGC	2 cut(s)	347, 410
HhaI	GCGC	3 cut(s)	224, 302, 343
Hin1I	GRCGYC	2 cut(s)	421, 995
Hin6I	GCGC	3 cut(s)	222, 300, 341
HinP1I	GCGC	3 cut(s)	222, 300, 341
HincII	GTYRAC	3 cut(s)	1407, 1615, 2004
HindII	GTYRAC	3 cut(s)	1407, 1615, 2004
HinfI	GANTC	5 cut(s)	248, 771, 1254, 1687, 1862
HpaI	GTTAAC	1 cut(s)	2004
HpaII	CCGG	4 cut(s)	15, 123, 465, 754
HphI	GGTGA	4 cut(s)	104, 253, 734, 1352
Hpy166II	GTNNAC	7 cut(s)	789, 1025, 1107, 1407, 1436, 1615, 2004
Hpy188I	TCNGA	5 cut(s)	134, 369, 1225, 1431, 1828
Hpy188III	TCNNGA	7 cut(s)	230, 307, 425, 700, 713, 754, 1008
Hpy8I	GTNNAC	7 cut(s)	789, 1025, 1107, 1407, 1436, 1615, 2004
Hpy99I	CGWCG	1 cut(s)	359
HpyAV	CCTTC	7 cut(s)	75, 181, 274, 1030, 1759, 1766, 1823
HpyCH4III	ACNGT	5 cut(s)	377, 1351, 1387, 1594, 1993
HpyCH4IV	ACGT	1 cut(s)	995
HpyCH4V	TGCA	9 cut(s)	830, 953, 1016, 1091, 1465, 1499, 1520, 1817, 1914
HpyF10VI	GCNNNNNNNGC	2 cut(s)	809, 1097
HpyF3I	CTNAG	4 cut(s)	366, 1222, 1430, 2042
HpySE526I	ACGT	1 cut(s)	995
Hsp92I	GRCGYC	2 cut(s)	421, 995
HspAI	GCGC	3 cut(s)	222, 300, 341
Kpn2I	TCCGGA	1 cut(s)	753
KroI	GCCGGC	1 cut(s)	14
KroNI	GCCGGC	1 cut(s)	16
Ksp22I	TGATCA	1 cut(s)	396
KspAI	GTTAAC	1 cut(s)	2004
Kzo9I	GATC	4 cut(s)	396, 1197, 1786, 1984
LguI	GCTCTTC	1 cut(s)	1539
LmnI	GCTCC	4 cut(s)	23, 215, 346, 908
Lsp1109I	GCAGC	1 cut(s)	502
LweI	GCATC	8 cut(s)	421, 631, 747, 1143, 1452, 1703, 2008, 2027
MabI	ACCWGGT	1 cut(s)	1179
MaeI	CTAG	1 cut(s)	938
MaeII	ACGT	1 cut(s)	995
MaeIII	GTNAC	8 cut(s)	91, 259, 1112, 1183, 1328, 1577, 1694, 1718
MalI	GATC	4 cut(s)	398, 1199, 1788, 1986
MboI	GATC	4 cut(s)	396, 1197, 1786, 1984
MboII	GAAGA	9 cut(s)	145, 150, 190, 893, 1139, 1295, 1444, 1526, 1781
MfeI	CAATTG	1 cut(s)	999
MhlI	GDGCHC	2 cut(s)	905, 1905
MluCI	AATT	6 cut(s)	954, 999, 1339, 1551, 1748, 1776
MlyI	GAGTC	2 cut(s)	257, 780
MmeI	TCCRAC	2 cut(s)	1116, 1305
Mph1103I	ATGCAT	1 cut(s)	1819
MroI	TCCGGA	1 cut(s)	753
MroNI	GCCGGC	1 cut(s)	14
MseI	TTAA	6 cut(s)	867, 924, 1746, 1779, 2003, 2073
MslI	CAYNNNNRTG	3 cut(s)	914, 948, 1431
MspI	CCGG	4 cut(s)	15, 123, 465, 754
MspR9I	CCNGG	2 cut(s)	466, 1181
MunI	CAATTG	1 cut(s)	999
Mva1269I	GAATGC	1 cut(s)	1093
MvaI	CCWGG	1 cut(s)	1181
MvnI	CGCG	5 cut(s)	222, 300, 317, 341, 343
MwoI	GCNNNNNNNGC	2 cut(s)	809, 1097
NaeI	GCCGGC	1 cut(s)	16
NciI	CCSGG	1 cut(s)	466
NdeII	GATC	4 cut(s)	396, 1197, 1786, 1984
NgoMIV	GCCGGC	1 cut(s)	14
NlaIV	GGNNCC	2 cut(s)	19, 328
NmeAIII	GCCGAG	1 cut(s)	483
NmuCI	GTSAC	3 cut(s)	259, 1183, 1718
NsiI	ATGCAT	1 cut(s)	1819
NspI	RCATGY	5 cut(s)	947, 1315, 1518, 1621, 1821
PaeR7I	CTCGAG	1 cut(s)	230
PciI	ACATGT	2 cut(s)	1311, 1617
PciSI	GCTCTTC	1 cut(s)	1539
PctI	GAATGC	1 cut(s)	1093
PdiI	GCCGGC	1 cut(s)	16
PfeI	GAWTC	3 cut(s)	1254, 1687, 1862
PflFI	GACNNNGTC	1 cut(s)	1181
PkrI	GCNGC	1 cut(s)	517
PleI	GAGTC	2 cut(s)	256, 779
PpsI	GAGTC	2 cut(s)	256, 779
PpuMI	RGGWCCY	1 cut(s)	327
PscI	ACATGT	2 cut(s)	1311, 1617
PshAI	GACNNNNGTC	1 cut(s)	48
Psp5II	RGGWCCY	1 cut(s)	327
Psp6I	CCWGG	1 cut(s)	1179
PspGI	CCWGG	1 cut(s)	1179
PspN4I	GGNNCC	2 cut(s)	19, 328
PspPI	GGNCC	2 cut(s)	235, 327
PspPPI	RGGWCCY	1 cut(s)	327
PsyI	GACNNNGTC	1 cut(s)	1181
RsaI	GTAC	2 cut(s)	1822, 1943
RsaNI	GTAC	2 cut(s)	1821, 1942
RseI	CAYNNNNRTG	3 cut(s)	914, 948, 1431
SapI	GCTCTTC	1 cut(s)	1539
SaqAI	TTAA	6 cut(s)	867, 924, 1746, 1779, 2003, 2073
SatI	GCNGC	1 cut(s)	516
Sau3AI	GATC	4 cut(s)	396, 1197, 1786, 1984
Sau96I	GGNCC	2 cut(s)	235, 327
SchI	GAGTC	2 cut(s)	257, 780
ScrFI	CCNGG	2 cut(s)	466, 1181
SduI	GDGCHC	2 cut(s)	905, 1905
SexAI	ACCWGGT	1 cut(s)	1179
SfaNI	GCATC	8 cut(s)	421, 631, 747, 1143, 1452, 1703, 2008, 2027
SfcI	CTRYAG	1 cut(s)	1927
Sfr274I	CTCGAG	1 cut(s)	230
SinI	GGWCC	1 cut(s)	327
SlaI	CTCGAG	1 cut(s)	230
SmiI	ATTTAAAT	1 cut(s)	1747
SmiMI	CAYNNNNRTG	3 cut(s)	914, 948, 1431
SmlI	CTYRAG	3 cut(s)	230, 713, 1333
SmoI	CTYRAG	3 cut(s)	230, 713, 1333
Sse9I	AATT	6 cut(s)	954, 999, 1339, 1551, 1748, 1776
SspI	AATATT	1 cut(s)	1525
SspMI	CTAG	1 cut(s)	938
StyD4I	CCNGG	2 cut(s)	464, 1179
StyI	CCWWGG	1 cut(s)	330
SwaI	ATTTAAAT	1 cut(s)	1747
TaaI	ACNGT	5 cut(s)	377, 1351, 1387, 1594, 1993
TaiI	ACGT	1 cut(s)	998
TasI	AATT	6 cut(s)	954, 999, 1339, 1551, 1748, 1776
TatI	WGTACW	1 cut(s)	1820
TfiI	GAWTC	3 cut(s)	1254, 1687, 1862
Tru1I	TTAA	6 cut(s)	867, 924, 1746, 1779, 2003, 2073
Tru9I	TTAA	6 cut(s)	867, 924, 1746, 1779, 2003, 2073
TseFI	GTSAC	3 cut(s)	259, 1183, 1718
TseI	GCWGC	1 cut(s)	515
Tsp45I	GTSAC	3 cut(s)	259, 1183, 1718
TspDTI	ATGAA	7 cut(s)	470, 539, 1071, 1238, 1246, 1544, 1778
TspGWI	ACGGA	2 cut(s)	10, 1084
Tth111I	GACNNNGTC	1 cut(s)	1181
VpaK11BI	GGWCC	1 cut(s)	327
XagI	CCTNNNNNAGG	1 cut(s)	1966
XapI	RAATTY	2 cut(s)	1339, 1551
XceI	RCATGY	5 cut(s)	947, 1315, 1518, 1621, 1821
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1187
XhoI	CTCGAG	1 cut(s)	230
XmiI	GTMKAC	2 cut(s)	788, 1106
XspI	CTAG	1 cut(s)	938
ZraI	GACGTC	1 cut(s)	996
Zsp2I	ATGCAT	1 cut(s)	1819

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.