No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000009455 |
| rosa_multiflora | Rmu_sc0002934.1_g000054 Rmu_sc0002963.1_g000004 |
| rosa_samantha | Rh1CG275600 Rh1DG079800 Rh2AG444700 Rh2BG455700 Rh4DG273700 Rh6AG105900 Rh6BG100300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 70 |
| AciI | CCGC | 1 cut(s) | 70 |
| AfaI | GTAC | 1 cut(s) | 116 |
| ApeKI | GCWGC | 1 cut(s) | 171 |
| AspS9I | GGNCC | 2 cut(s) | 10, 99 |
| AvaII | GGWCC | 2 cut(s) | 10, 99 |
| BbvI | GCAGC | 1 cut(s) | 158 |
| BceAI | ACGGC | 1 cut(s) | 46 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 153, 187 |
| BisI | GCNGC | 2 cut(s) | 71, 172 |
| BlsI | GCNGC | 2 cut(s) | 72, 173 |
| Bme18I | GGWCC | 2 cut(s) | 10, 99 |
| BmgT120I | GGNCC | 2 cut(s) | 10, 99 |
| BmiI | GGNNCC | 4 cut(s) | 11, 74, 100, 143 |
| BsaJI | CCNNGG | 1 cut(s) | 13 |
| BsaWI | WCCGGW | 1 cut(s) | 75 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 133, 139, 163, 169 |
| BseDI | CCNNGG | 1 cut(s) | 13 |
| BseRI | GAGGAG | 2 cut(s) | 65, 80 |
| BseXI | GCAGC | 1 cut(s) | 158 |
| BsiSI | CCGG | 2 cut(s) | 76, 145 |
| BslFI | GGGAC | 2 cut(s) | 23, 41 |
| BsmFI | GGGAC | 2 cut(s) | 23, 41 |
| Bsp143I | GATC | 2 cut(s) | 42, 54 |
| BspACI | CCGC | 1 cut(s) | 70 |
| BspLI | GGNNCC | 4 cut(s) | 11, 74, 100, 143 |
| BsrBI | CCGCTC | 1 cut(s) | 70 |
| BssECI | CCNNGG | 1 cut(s) | 13 |
| BssMI | GATC | 2 cut(s) | 42, 54 |
| BssT1I | CCWWGG | 1 cut(s) | 13 |
| BstKTI | GATC | 2 cut(s) | 45, 57 |
| BstMBI | GATC | 2 cut(s) | 42, 54 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 79 |
| BstV1I | GCAGC | 1 cut(s) | 158 |
| Cfr13I | GGNCC | 2 cut(s) | 10, 99 |
| Csp6I | GTAC | 1 cut(s) | 115 |
| CviJI | RGCY | 4 cut(s) | 19, 73, 82, 144 |
| CviKI_1 | RGCY | 4 cut(s) | 19, 73, 82, 144 |
| CviQI | GTAC | 1 cut(s) | 115 |
| DpnI | GATC | 2 cut(s) | 44, 56 |
| DpnII | GATC | 2 cut(s) | 42, 54 |
| Eco130I | CCWWGG | 1 cut(s) | 13 |
| Eco47I | GGWCC | 2 cut(s) | 10, 99 |
| EcoO109I | RGGNCCY | 1 cut(s) | 10 |
| EcoT14I | CCWWGG | 1 cut(s) | 13 |
| ErhI | CCWWGG | 1 cut(s) | 13 |
| FaqI | GGGAC | 2 cut(s) | 23, 41 |
| Fnu4HI | GCNGC | 2 cut(s) | 71, 172 |
| Fsp4HI | GCNGC | 2 cut(s) | 71, 172 |
| GluI | GCNGC | 2 cut(s) | 71, 172 |
| HapII | CCGG | 2 cut(s) | 76, 145 |
| HinfI | GANTC | 1 cut(s) | 148 |
| HpaII | CCGG | 2 cut(s) | 76, 145 |
| Hpy188I | TCNGA | 3 cut(s) | 47, 103, 141 |
| Hpy99I | CGWCG | 1 cut(s) | 107 |
| HpyAV | CCTTC | 1 cut(s) | 185 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 79 |
| Kzo9I | GATC | 2 cut(s) | 42, 54 |
| LmnI | GCTCC | 3 cut(s) | 67, 78, 141 |
| LpnPI | CCDG | 3 cut(s) | 71, 89, 158 |
| Lsp1109I | GCAGC | 1 cut(s) | 158 |
| MalI | GATC | 2 cut(s) | 44, 56 |
| MbiI | CCGCTC | 1 cut(s) | 70 |
| MboI | GATC | 2 cut(s) | 42, 54 |
| MlyI | GAGTC | 1 cut(s) | 157 |
| MmeI | TCCRAC | 2 cut(s) | 119, 126 |
| MnlI | CCTC | 3 cut(s) | 43, 58, 158 |
| MspI | CCGG | 2 cut(s) | 76, 145 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 79 |
| NdeII | GATC | 2 cut(s) | 42, 54 |
| NlaIV | GGNNCC | 4 cut(s) | 11, 74, 100, 143 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 30 |
| PkrI | GCNGC | 2 cut(s) | 72, 173 |
| PleI | GAGTC | 1 cut(s) | 156 |
| PpsI | GAGTC | 1 cut(s) | 156 |
| PpuMI | RGGWCCY | 1 cut(s) | 10 |
| Psp5II | RGGWCCY | 1 cut(s) | 10 |
| PspN4I | GGNNCC | 4 cut(s) | 11, 74, 100, 143 |
| PspPI | GGNCC | 2 cut(s) | 10, 99 |
| PspPPI | RGGWCCY | 1 cut(s) | 10 |
| RsaI | GTAC | 1 cut(s) | 116 |
| RsaNI | GTAC | 1 cut(s) | 115 |
| SatI | GCNGC | 2 cut(s) | 71, 172 |
| Sau3AI | GATC | 2 cut(s) | 42, 54 |
| Sau96I | GGNCC | 2 cut(s) | 10, 99 |
| SchI | GAGTC | 1 cut(s) | 157 |
| SetI | ASST | 3 cut(s) | 15, 139, 169 |
| SgeI | CNNG | 9 cut(s) | 26, 37, 88, 98, 103, 118, 146, 157, 176 |
| SinI | GGWCC | 2 cut(s) | 10, 99 |
| SsiI | CCGC | 1 cut(s) | 70 |
| StyI | CCWWGG | 1 cut(s) | 13 |
| TaqI | TCGA | 1 cut(s) | 57 |
| TauI | GCSGC | 1 cut(s) | 73 |
| TseI | GCWGC | 1 cut(s) | 171 |
| VpaK11BI | GGWCC | 2 cut(s) | 10, 99 |