Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0011447

Physical Location & Seq

Genomic Coordinates Reverse (-)

390783 .. 393085

Gene Structure 2303 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG004500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGCTGGGGATTGAATTGGAGTCGATCGGTCTTGCATTCAAGAGCTCGGAAATCAAAATGGCCAACGTCCGCGTAAAGGATCAGCAAAAGGCTTCACCAGATTCTGCAAAGGCAGAGGTGGGAGAGGTTGACACCAGAGCTCCCTTCCAATCTGTCAAAGCTGCTGTTAGTCTGTTTGGTGAAGTCGCCGTTTCTAAAGGGAAACAAGCATCACCAACCAAGAAAAAGCTATCAGAGAATGATGAACTGGACATGGAGACACAGCTTCTGTTGGCCCGGAAAGAACTCACCAAGGTTAAGCAACAACTAGAGAGTGCTGAAACCACAAAAGCTCGAGCACTTTCCGAACTTGACAAGGCTAAGAGAACACTAGAGGAACTAAATACCAAGATCAAAAGTGTAAGCGACTCCAAGAAATCAGCAATGAAAGCTGCCGAAGAAGTACTCAAGGCTCGCGCCAAGAATCTGGAAGAGGTGAAAGCCAGAGAATCAATTGAAGGTGCTGCTTGGAAACAAGAATTGGACCATGCAAGAAACGAGTACATAAGCACGGTCACCCAACTTGATGCTGCAAAGCAAGAGCTCACCAAAATCCGGCAGGACTTTGATGCCGCCTTGGAAGCAAAACTGGTTGCGTTCCAACAGGCAGGAGAAGCTCAACGTTCAGCAAAAGTTAACTCCGACAGGGTCACTGAGCTCCGAAAGGAAATTGCAGCCATGCAAGGATCCATTGAGCAGCTAAAAGTCGTCTCTATACATGCCCAACAAGAGCAGGCAAAGGTTGTGGCCGAAAGGGAGGCCCGCCTACAAGATTACAAAGCTGCTAAGCAACAAGCAGAAGACAGACTGCTATCTCTCAAGGAGGAAGTTGATCCTGAACTAATCAAAGATCTGGAGGCAAAGCTTGGACAAACAACAGTGGAAGTTGAGGTCTTACAGGAGGAAATGAGAAAAGCCCATGCGTCCGAAATGGACTCTGTGAGAGTTGTGACAATGGAGCTGAATGAAGCCACAAAGAAGCTCCAGGAAGTTGCTGAAGAAGAGAGCTCTCTTCGGAGCTTTGTGAGCTCCCTCAGGCTGGAATTGGAGGATGTGAAGAGGGAAACCGGTGAACTCAGGAACAAGGAAATGGAACTGGAAGCTCTTGCTACTAGTCTGACTGCTGAAATGGAGAAAAACAAAGCCGAGGCTGAGCGGCTCAAGGAAGAGGCAGATCGTGCGGCAGTCCAGAAGCTGTCATCAGAAACCGAAAGCGCAAGACTGGAAGCCGAGAAGATGAAACAAAATGTTGTTCAACAGAAGCGAGAGGCTGAAGATAGTCGAAATTCAGCGGAGGAAGCAGAGAAGAAACTGAAACTTGCACTGGAAGAAGCTGAAGATGCAATAGAAGCAGAGAAAAGAGCCCTGGTACAGCTGAAGGCCTTATCCGGGACACATCATGACACAGCAGCTTCAGAGAGCACTACTCCTAGTACAACTGGGAAGATCAAATTATCATTGGAGGACTATGAGTGTTTGAGTAGGAAAGCGAAGGAATGTGAAAGCTTGGCTGAGATAAAAGAGGCAGAGTGCATTGTCCAAGTAGAAGCGATCAGTGTGAGAAAGAATGAAGCAGATAAAAGGTTGGAGGCCTCCTTAAAAGCGATAGAGGAAATCAAGACTGCAACAAACTTGGCACTGAGAAACGCAGAGTCGGCAGATTCAGCAAAATCGGTGGTTGAGGGTGAACTTCGCAAGTGGCGTCAAGAAGAACAAACGGTGGTGGTAGGCGAGTCATCACGGCCACCCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009987 GO:0016043 GO:0019750 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WEMBL

Protein Analysis

597

Amino Acids

66.4

Weight (kDa)

5.24

Isoelectric Point (pI)

48.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	42 - 585	1.1e-42	Weak chloroplast movement under blue light

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12150 AT1G12150
fragaria_vesca	FvH4_3g00281 FvH4_3g00281
malus_domestica	MD05G1362200.v1.1 MD10G1339700.v1.1
prunus_persica	Prupe.4G003200_v2.0.a1
pyrus_communis	pycom05g32850 pycom05g32860 pycom10g28950
rosa_chinensis	RchiOBHm_Chr5g0000421
rosa_laevigata	RLG00000030865
rosa_multiflora	Rmu_co8243975.1_g000001
rosa_roxburghii	Rroxscaffold_1G00075740
rosa_rugosa	Rorug04G0383500
rosa_samantha	Rh5AG003400 Rh5BG004500 Rh5CG003600 Rh5DG003500
rosa_wichuraiana	Rw5G000340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1195
AccII	CGCG	2 cut(s)	72, 456
AciI	CCGC	6 cut(s)	70, 612, 802, 1195, 1220, 1331
AclI	AACGTT	1 cut(s)	661
AclWI	GGATC	4 cut(s)	87, 720, 733, 866
AcoI	YGGCCR	3 cut(s)	60, 786, 1781
AcsI	RAATTY	1 cut(s)	1324
AcuI	CTGAAG	5 cut(s)	1056, 1332, 1395, 1436, 1437
AcyI	GRCGYC	1 cut(s)	1741
AfaI	GTAC	4 cut(s)	444, 542, 1410, 1474
AfiI	CCNNNNNNNGG	4 cut(s)	76, 594, 1078, 1428
AgeI	ACCGGT	1 cut(s)	1106
AgsI	TTSAA	4 cut(s)	14, 40, 497, 1295
AhlI	ACTAGT	1 cut(s)	1151
AjnI	CCWGG	2 cut(s)	1023, 1404
AjuI	GAANNNNNNNTTGG	2 cut(s)	503, 535
Alw21I	GWGCWC	8 cut(s)	47, 142, 340, 585, 699, 1049, 1070, 1463
Alw26I	GTCTC	2 cut(s)	251, 754
AlwI	GGATC	4 cut(s)	87, 720, 733, 866
AlwNI	CAGNNNCTG	3 cut(s)	104, 268, 1234
Ama87I	CYCGRG	1 cut(s)	333
AoxI	GGCC	7 cut(s)	60, 273, 786, 798, 1419, 1629, 1781
ApeKI	GCWGC	8 cut(s)	161, 431, 503, 569, 713, 736, 821, 1448
ApoI	RAATTY	1 cut(s)	1324
AsiGI	ACCGGT	1 cut(s)	1106
AspLEI	GCGC	2 cut(s)	458, 1256
AspS9I	GGNCC	3 cut(s)	274, 523, 799
AsuC2I	CCSGG	2 cut(s)	277, 1429
AsuHPI	GGTGA	9 cut(s)	87, 191, 204, 280, 487, 547, 577, 1121, 1736
AvaI	CYCGRG	1 cut(s)	333
AvaII	GGWCC	1 cut(s)	523
AxyI	CCTNAGG	1 cut(s)	1073
BalI	TGGCCA	1 cut(s)	62
BamHI	GGATCC	1 cut(s)	725
BanII	GRGCYC	7 cut(s)	47, 142, 585, 699, 1049, 1070, 1405
BbsI	GAAGAC	1 cut(s)	846
Bbv12I	GWGCWC	8 cut(s)	47, 142, 340, 585, 699, 1049, 1070, 1463
BbvI	GCAGC	8 cut(s)	148, 418, 490, 556, 725, 748, 808, 1460
BceAI	ACGGC	1 cut(s)	173
BciT130I	CCWGG	2 cut(s)	1025, 1406
BcnI	CCSGG	2 cut(s)	277, 1429
BcoDI	GTCTC	2 cut(s)	251, 754
BcuI	ACTAGT	1 cut(s)	1151
BfaI	CTAG	5 cut(s)	308, 371, 1152, 1470, 1792
BglII	AGATCT	1 cut(s)	889
BlpI	GCTNAGC	2 cut(s)	825, 1191
BmcAI	AGTACT	1 cut(s)	444
Bme1390I	CCNGG	4 cut(s)	277, 1025, 1406, 1429
Bme18I	GGWCC	1 cut(s)	523
BmeT110I	CYCGRG	1 cut(s)	333
BmgT120I	GGNCC	3 cut(s)	274, 523, 799
BmiI	GGNNCC	1 cut(s)	727
BmrFI	CCNGG	4 cut(s)	277, 1025, 1406, 1429
BmrI	ACTGGG	1 cut(s)	1488
BmsI	GCATC	4 cut(s)	218, 556, 598, 1369
BmuI	ACTGGG	1 cut(s)	1488
BpiI	GAAGAC	1 cut(s)	846
BplI	GAGNNNNNCTC	2 cut(s)	1450, 1482
BpmI	CTGGAG	2 cut(s)	914, 1007
Bpu1102I	GCTNAGC	2 cut(s)	825, 1191
BpuEI	CTTGAG	3 cut(s)	431, 842, 1184
BpuMI	CCSGG	2 cut(s)	277, 1429
BsaHI	GRCGYC	1 cut(s)	1741
BsaJI	CCNNGG	4 cut(s)	291, 615, 1185, 1404
BsaWI	WCCGGW	1 cut(s)	1106
BsaXI	ACNNNNNCTCC	2 cut(s)	124, 154
Bsc4I	CCNNNNNNNGG	4 cut(s)	76, 594, 1078, 1428
Bse118I	RCCGGY	1 cut(s)	1106
Bse1I	ACTGG	6 cut(s)	252, 633, 1140, 1266, 1368, 1483
Bse21I	CCTNAGG	1 cut(s)	1073
Bse3DI	GCAATG	1 cut(s)	429
BseBI	CCWGG	2 cut(s)	1025, 1406
BseDI	CCNNGG	4 cut(s)	291, 615, 1185, 1404
BseGI	GGATG	1 cut(s)	1096
BseLI	CCNNNNNNNGG	4 cut(s)	76, 594, 1078, 1428
BseMI	GCAATG	1 cut(s)	429
BseMII	CTCAG	6 cut(s)	684, 1087, 1129, 1182, 1542, 1670
BseNI	ACTGG	6 cut(s)	252, 633, 1140, 1266, 1368, 1483
BseXI	GCAGC	8 cut(s)	148, 418, 490, 556, 725, 748, 808, 1460
BseYI	CCCAGC	1 cut(s)	4
Bsh1236I	CGCG	2 cut(s)	72, 456
Bsh1285I	CGRYCG	1 cut(s)	27
BshFI	GGCC	7 cut(s)	62, 275, 788, 800, 1421, 1631, 1783
BshTI	ACCGGT	1 cut(s)	1106
BsiEI	CGRYCG	1 cut(s)	27
BsiHKAI	GWGCWC	8 cut(s)	47, 142, 340, 585, 699, 1049, 1070, 1463
BsiHKCI	CYCGRG	1 cut(s)	333
BsiSI	CCGG	4 cut(s)	277, 595, 1107, 1428
BslFI	GGGAC	1 cut(s)	1444
BslI	CCNNNNNNNGG	4 cut(s)	76, 594, 1078, 1428
BsmAI	GTCTC	2 cut(s)	251, 754
BsmBI	CGTCTC	1 cut(s)	754
BsmFI	GGGAC	1 cut(s)	1444
BsmI	GAATGC	1 cut(s)	35
BsnI	GGCC	7 cut(s)	62, 275, 788, 800, 1421, 1631, 1783
BsoBI	CYCGRG	1 cut(s)	333
Bsp1286I	GDGCHC	9 cut(s)	47, 142, 340, 585, 699, 1049, 1070, 1405, 1463
Bsp143I	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
Bsp1720I	GCTNAGC	2 cut(s)	825, 1191
BspACI	CCGC	6 cut(s)	70, 612, 802, 1195, 1220, 1331
BspANI	GGCC	7 cut(s)	62, 275, 788, 800, 1421, 1631, 1783
BspCNI	CTCAG	6 cut(s)	685, 1086, 1128, 1183, 1543, 1671
BspFNI	CGCG	2 cut(s)	72, 456
BspHI	TCATGA	1 cut(s)	1438
BspLI	GGNNCC	1 cut(s)	727
BspPI	GGATC	4 cut(s)	87, 720, 733, 866
BsrBI	CCGCTC	1 cut(s)	1195
BsrDI	GCAATG	1 cut(s)	429
BsrFI	RCCGGY	1 cut(s)	1106
BsrI	ACTGG	6 cut(s)	252, 633, 1140, 1266, 1368, 1483
BssAI	RCCGGY	1 cut(s)	1106
BssECI	CCNNGG	4 cut(s)	291, 615, 1185, 1404
BssMI	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
BssNI	GRCGYC	1 cut(s)	1741
BssT1I	CCWWGG	2 cut(s)	291, 615
Bst2UI	CCWGG	2 cut(s)	1025, 1406
Bst4CI	ACNGT	3 cut(s)	553, 919, 1759
Bst6I	CTCTTC	5 cut(s)	465, 1035, 1056, 1091, 1200
BstACI	GRCGYC	1 cut(s)	1741
BstAPI	GCANNNNNTGC	1 cut(s)	1217
BstC8I	GCNNGC	3 cut(s)	454, 774, 802
BstDEI	CTNAG	8 cut(s)	360, 693, 825, 1073, 1115, 1191, 1551, 1679
BstEII	GGTNACC	1 cut(s)	553
BstF5I	GGATG	1 cut(s)	1096
BstFNI	CGCG	2 cut(s)	72, 456
BstHHI	GCGC	2 cut(s)	458, 1256
BstKTI	GATC	9 cut(s)	27, 82, 393, 728, 874, 892, 1216, 1488, 1593
BstMAI	GTCTC	2 cut(s)	251, 754
BstMBI	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
BstMCI	CGRYCG	1 cut(s)	27
BstNI	CCWGG	2 cut(s)	1025, 1406
BstNSI	RCATGY	1 cut(s)	761
BstPI	GGTNACC	1 cut(s)	553
BstSCI	CCNGG	4 cut(s)	275, 1023, 1404, 1427
BstUI	CGCG	2 cut(s)	72, 456
BstV1I	GCAGC	8 cut(s)	148, 418, 490, 556, 725, 748, 808, 1460
BstV2I	GAAGAC	1 cut(s)	846
BstX2I	RGATCY	2 cut(s)	725, 889
BstXI	CCANNNNNNTGG	1 cut(s)	466
BstYI	RGATCY	2 cut(s)	725, 889
Bsu36I	CCTNAGG	1 cut(s)	1073
BsuRI	GGCC	7 cut(s)	62, 275, 788, 800, 1421, 1631, 1783
BtsCI	GGATG	1 cut(s)	1096
BtsIMutI	CAGTG	5 cut(s)	690, 924, 1361, 1600, 1676
Cac8I	GCNNGC	3 cut(s)	454, 774, 802
CaiI	CAGNNNCTG	3 cut(s)	104, 268, 1234
CciI	TCATGA	1 cut(s)	1438
CfoI	GCGC	2 cut(s)	458, 1256
Cfr10I	RCCGGY	1 cut(s)	1106
Cfr13I	GGNCC	3 cut(s)	274, 523, 799
CseI	GACGC	2 cut(s)	951, 1730
Csp6I	GTAC	4 cut(s)	443, 541, 1409, 1473
CspAI	ACCGGT	1 cut(s)	1106
CspCI	CAANNNNNGTGG	4 cut(s)	765, 800, 1695, 1730
CviAII	CATG	6 cut(s)	253, 527, 718, 758, 959, 1439
CviQI	GTAC	4 cut(s)	443, 541, 1409, 1473
DdeI	CTNAG	8 cut(s)	360, 693, 825, 1073, 1115, 1191, 1551, 1679
DpnI	GATC	9 cut(s)	26, 81, 392, 727, 873, 891, 1215, 1487, 1592
DpnII	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
EaeI	YGGCCR	3 cut(s)	60, 786, 1781
Eam1104I	CTCTTC	5 cut(s)	465, 1035, 1056, 1091, 1200
EarI	CTCTTC	5 cut(s)	465, 1035, 1056, 1091, 1200
Ecl136II	GAGCTC	6 cut(s)	45, 140, 583, 697, 1047, 1068
Eco130I	CCWWGG	2 cut(s)	291, 615
Eco147I	AGGCCT	2 cut(s)	1421, 1631
Eco24I	GRGCYC	7 cut(s)	47, 142, 585, 699, 1049, 1070, 1405
Eco47I	GGWCC	1 cut(s)	523
Eco53kI	GAGCTC	6 cut(s)	45, 140, 583, 697, 1047, 1068
Eco57I	CTGAAG	5 cut(s)	1056, 1332, 1395, 1436, 1437
Eco81I	CCTNAGG	1 cut(s)	1073
Eco88I	CYCGRG	1 cut(s)	333
Eco91I	GGTNACC	1 cut(s)	553
EcoICRI	GAGCTC	6 cut(s)	45, 140, 583, 697, 1047, 1068
EcoO65I	GGTNACC	1 cut(s)	553
EcoRII	CCWGG	2 cut(s)	1023, 1404
EcoT14I	CCWWGG	2 cut(s)	291, 615
EcoT38I	GRGCYC	7 cut(s)	47, 142, 585, 699, 1049, 1070, 1405
ErhI	CCWWGG	2 cut(s)	291, 615
Esp3I	CGTCTC	1 cut(s)	754
FaeI	CATG	6 cut(s)	256, 530, 721, 761, 962, 1442
FaiI	YATR	9 cut(s)	254, 528, 545, 719, 755, 759, 960, 1440, 1509
FaqI	GGGAC	1 cut(s)	1444
FatI	CATG	6 cut(s)	252, 526, 717, 757, 958, 1438
FauI	CCCGC	1 cut(s)	809
FokI	GGATG	1 cut(s)	1103
FriOI	GRGCYC	7 cut(s)	47, 142, 585, 699, 1049, 1070, 1405
FspBI	CTAG	5 cut(s)	308, 371, 1152, 1470, 1792
GlaI	GCGC	2 cut(s)	457, 1255
GsaI	CCCAGC	1 cut(s)	8
GsuI	CTGGAG	2 cut(s)	914, 1007
HaeIII	GGCC	7 cut(s)	62, 275, 788, 800, 1421, 1631, 1783
HapII	CCGG	4 cut(s)	277, 595, 1107, 1428
HgaI	GACGC	2 cut(s)	951, 1730
HhaI	GCGC	2 cut(s)	458, 1256
Hin1I	GRCGYC	1 cut(s)	1741
Hin1II	CATG	6 cut(s)	256, 530, 721, 761, 962, 1442
Hin6I	GCGC	2 cut(s)	456, 1254
HinP1I	GCGC	2 cut(s)	456, 1254
HincII	GTYRAC	2 cut(s)	130, 676
HindII	GTYRAC	2 cut(s)	130, 676
HindIII	AAGCTT	2 cut(s)	902, 1543
HinfI	GANTC	9 cut(s)	20, 101, 407, 463, 488, 974, 1691, 1700, 1772
HpaI	GTTAAC	1 cut(s)	676
HpaII	CCGG	4 cut(s)	277, 595, 1107, 1428
HphI	GGTGA	9 cut(s)	87, 191, 204, 280, 487, 547, 577, 1121, 1736
Hpy166II	GTNNAC	4 cut(s)	130, 676, 1112, 1727
Hpy188III	TCNNGA	9 cut(s)	40, 467, 875, 893, 1117, 1228, 1439, 1657, 1745
Hpy8I	GTNNAC	4 cut(s)	130, 676, 1112, 1727
HpyAV	CCTTC	4 cut(s)	154, 491, 1411, 1525
HpyCH4III	ACNGT	3 cut(s)	553, 919, 1759
HpyCH4IV	ACGT	2 cut(s)	66, 661
HpyF3I	CTNAG	8 cut(s)	360, 693, 825, 1073, 1115, 1191, 1551, 1679
HpySE526I	ACGT	2 cut(s)	66, 661
Hsp92I	GRCGYC	1 cut(s)	1741
Hsp92II	CATG	6 cut(s)	256, 530, 721, 761, 962, 1442
HspAI	GCGC	2 cut(s)	456, 1254
KspAI	GTTAAC	1 cut(s)	676
Kzo9I	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
LmnI	GCTCC	6 cut(s)	145, 702, 997, 1026, 1056, 1073
Lsp1109I	GCAGC	8 cut(s)	148, 418, 490, 556, 725, 748, 808, 1460
LweI	GCATC	4 cut(s)	218, 556, 598, 1369
MaeI	CTAG	5 cut(s)	308, 371, 1152, 1470, 1792
MaeII	ACGT	2 cut(s)	66, 661
MaeIII	GTNAC	3 cut(s)	553, 688, 988
MalI	GATC	9 cut(s)	26, 81, 392, 727, 873, 891, 1215, 1487, 1592
MbiI	CCGCTC	1 cut(s)	1195
MboI	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
MfeI	CAATTG	1 cut(s)	492
MflI	RGATCY	2 cut(s)	725, 889
MhlI	GDGCHC	9 cut(s)	47, 142, 340, 585, 699, 1049, 1070, 1405, 1463
MlsI	TGGCCA	1 cut(s)	62
MluCI	AATT	7 cut(s)	14, 492, 518, 708, 1082, 1324, 1490
MluNI	TGGCCA	1 cut(s)	62
MlyI	GAGTC	5 cut(s)	29, 401, 968, 1700, 1781
MmeI	TCCRAC	3 cut(s)	664, 705, 1605
Mox20I	TGGCCA	1 cut(s)	62
MscI	TGGCCA	1 cut(s)	62
MseI	TTAA	3 cut(s)	297, 675, 1637
Msp20I	TGGCCA	1 cut(s)	62
MspA1I	CMGCKG	2 cut(s)	1331, 1414
MspI	CCGG	4 cut(s)	277, 595, 1107, 1428
MspR9I	CCNGG	4 cut(s)	277, 1025, 1406, 1429
MunI	CAATTG	1 cut(s)	492
Mva1269I	GAATGC	1 cut(s)	35
MvaI	CCWGG	2 cut(s)	1025, 1406
MvnI	CGCG	2 cut(s)	72, 456
NciI	CCSGG	2 cut(s)	277, 1429
NdeII	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
NlaIII	CATG	6 cut(s)	256, 530, 721, 761, 962, 1442
NlaIV	GGNNCC	1 cut(s)	727
NmeAIII	GCCGAG	2 cut(s)	1210, 1294
NmuCI	GTSAC	3 cut(s)	553, 688, 988
NspI	RCATGY	1 cut(s)	761
PaeR7I	CTCGAG	1 cut(s)	333
PagI	TCATGA	1 cut(s)	1438
PceI	AGGCCT	2 cut(s)	1421, 1631
PcsI	WCGNNNNNNNCGW	1 cut(s)	1738
PctI	GAATGC	1 cut(s)	35
PfeI	GAWTC	4 cut(s)	101, 463, 488, 1700
PflFI	GACNNNGTC	1 cut(s)	686
PfoI	TCCNGGA	2 cut(s)	1023, 1427
PinAI	ACCGGT	1 cut(s)	1106
Ple19I	CGATCG	1 cut(s)	27
PleI	GAGTC	5 cut(s)	28, 401, 968, 1699, 1780
PpsI	GAGTC	5 cut(s)	28, 401, 968, 1699, 1780
Psp124BI	GAGCTC	6 cut(s)	47, 142, 585, 699, 1049, 1070
Psp1406I	AACGTT	1 cut(s)	661
Psp6I	CCWGG	2 cut(s)	1023, 1404
PspEI	GGTNACC	1 cut(s)	553
PspFI	CCCAGC	1 cut(s)	4
PspGI	CCWGG	2 cut(s)	1023, 1404
PspN4I	GGNNCC	1 cut(s)	727
PspPI	GGNCC	3 cut(s)	274, 523, 799
PspXI	VCTCGAGB	1 cut(s)	333
PstNI	CAGNNNCTG	3 cut(s)	104, 268, 1234
PsuI	RGATCY	2 cut(s)	725, 889
PsyI	GACNNNGTC	1 cut(s)	686
PvuI	CGATCG	1 cut(s)	27
PvuII	CAGCTG	1 cut(s)	1414
RsaI	GTAC	4 cut(s)	444, 542, 1410, 1474
RsaNI	GTAC	4 cut(s)	443, 541, 1409, 1473
SacI	GAGCTC	6 cut(s)	47, 142, 585, 699, 1049, 1070
SaqAI	TTAA	3 cut(s)	297, 675, 1637
Sau3AI	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
Sau96I	GGNCC	3 cut(s)	274, 523, 799
ScaI	AGTACT	1 cut(s)	444
SchI	GAGTC	5 cut(s)	29, 401, 968, 1700, 1781
ScrFI	CCNGG	4 cut(s)	277, 1025, 1406, 1429
SduI	GDGCHC	9 cut(s)	47, 142, 340, 585, 699, 1049, 1070, 1405, 1463
SfaNI	GCATC	4 cut(s)	218, 556, 598, 1369
Sfr274I	CTCGAG	1 cut(s)	333
SinI	GGWCC	1 cut(s)	523
SlaI	CTCGAG	1 cut(s)	333
SmlI	CTYRAG	4 cut(s)	333, 446, 857, 1199
SmoI	CTYRAG	4 cut(s)	333, 446, 857, 1199
SpeI	ACTAGT	1 cut(s)	1151
Sse9I	AATT	7 cut(s)	14, 492, 518, 708, 1082, 1324, 1490
SseBI	AGGCCT	2 cut(s)	1421, 1631
SsiI	CCGC	6 cut(s)	70, 612, 802, 1195, 1220, 1331
SspMI	CTAG	5 cut(s)	308, 371, 1152, 1470, 1792
SstI	GAGCTC	6 cut(s)	47, 142, 585, 699, 1049, 1070
StuI	AGGCCT	2 cut(s)	1421, 1631
StyD4I	CCNGG	4 cut(s)	275, 1023, 1404, 1427
StyI	CCWWGG	2 cut(s)	291, 615
TaaI	ACNGT	3 cut(s)	553, 919, 1759
TaiI	ACGT	2 cut(s)	69, 664
TaqI	TCGA	3 cut(s)	23, 334, 1321
TaqII	GACCGA	1 cut(s)	17
TasI	AATT	7 cut(s)	14, 492, 518, 708, 1082, 1324, 1490
TatI	WGTACW	3 cut(s)	442, 540, 1472
TauI	GCSGC	3 cut(s)	614, 1198, 1223
TfiI	GAWTC	4 cut(s)	101, 463, 488, 1700
Tru1I	TTAA	3 cut(s)	297, 675, 1637
Tru9I	TTAA	3 cut(s)	297, 675, 1637
TscAI	CASTG	5 cut(s)	697, 924, 1368, 1600, 1683
TseFI	GTSAC	3 cut(s)	553, 688, 988
TseI	GCWGC	8 cut(s)	161, 431, 503, 569, 713, 736, 821, 1448
Tsp45I	GTSAC	3 cut(s)	553, 688, 988
TspDTI	ATGAA	5 cut(s)	258, 440, 1020, 1292, 1623
TspRI	CASTG	5 cut(s)	697, 924, 1368, 1600, 1683
Tth111I	GACNNNGTC	1 cut(s)	686
VpaK11BI	GGWCC	1 cut(s)	523
XapI	RAATTY	1 cut(s)	1324
XceI	RCATGY	1 cut(s)	761
XhoI	CTCGAG	1 cut(s)	333
XspI	CTAG	5 cut(s)	308, 371, 1152, 1470, 1792
ZrmI	AGTACT	1 cut(s)	444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.