Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0011447

Physical Location & Seq

Genomic Coordinates Reverse (-)

266017 .. 267881

Gene Structure 1865 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG003500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGGCCAACGTCCGCGTAAAGGATCAGCAAAAGGCTTCACCAGATTCTGCAAAGGCAGAGGTGGGAGAGGTTGACACCAGAGCTCCCTTCCAATCTGTCAAAGCTGCTGTTAGTCTGTTTGGTGAAGTCGCCGTTTCTAAAGGGAAACAAGCATCACCAACCAAGAAAAAGCTATCAGAGAATGATGAACTGGACATGGAGACACAGCTTCTGTTGGCCCGGAAAGAACTCACCAAGGTTAAGCAACAACTAGAGAGTGCTGAAACCACAAAAGCTCGAGCACTTTCCGAACTTGACAAGGCTAAGAGAACACTAGAGGAACTAAATACCAAGATCAAAAGTGTAATCGACTCCAAGAAATCAGCAATGAACGCTGCCGAAGAAGTCAAGGCTCGCGCCAAGAATCTGGAAGAGGTGAAAGCCAGAGAATCAATTGAAGGTGCTGCTTGGAAACAAGAATTGGACCATGCAAGAAACGAGTACATAAGCACGGTCACCCAACTTGATGCGGCAAAGCAAGAGCTCACCAAAATCCGGCAGGACTTTGATGCCGCCTTGGAAGCAAAACTGGCTGCGTTCCAACAGGCAGGAGAAGCTCAACGTTCAGCAAAAGTTAACTCCGACAGGGTCACTGAGCTCCGAAAGGAAATTGCAGCCATGCAAGGATCCATTGAGCAGCTAAAAGTCGTCTCTATACATGCCCAACAAGAGCAGGCAAAGGTTGTGGCCGAAAGGGAGGCCCGCCTACAAGATTACAAAGCTGCTAAGCAACAAGCAGAAGACAAACTGCTATCTCTCAAGGAGGAAGTTGATCCTGAACTAATCAAAGATCTGGAGGCAAAGCTTGGACAAACAACAGTGGAAGTTGAGGTCTTACAGGAGGAAATGAGAAAAGCCCATGCCTCCGAAATGGACTCTGTGAGAGTTGTGACAATGGAGCTGAATGAAGCCACAAAGAAGCTGCAGGAAGTTGCTGAAGAAGAGAGCTCTCTTCGGAGCTTTGTGAGCTCCCTCAGGCTGGAATTGGAGGATGTGAAGAGGGAAACCGGTGAACTCAGGAACAAGGAAATGGAACTGGAAGCTCTTGCTACTAGTCTGACCGCTGAAATGGAGAAAAACAAAGCCGAGGCTGAGCGGCTCAAGGAAGAGGCGGATCGTGCGGCAGTCCAGAAGCTGTCATCAGAAACCGAAAGCGCAAGACTGGAAGCCGAGAAGATGAAACAAAATGTTGTTCAGCAGAAGCGAGAAGCTGAAGATAGTCAAAATTCAGCGGAGGAAGCAGAGAAGAAACTGAAACTTGCACTGGAAGAAGCTGAAGATGCAATAGAAGCAGAGAAAAGAGCCCTGGAACAGCTGAAGGCCTTATCCGGGACACATCATGACACAGCAGCTTCAGAGAGCACTACTCCTAGTACAACTGGGAAGATCAAATTATCATTGGAGGACTATGAGTGTTTGAGTAGGAAAGCGAAGGAATGTGAAAGCTTGGCTGAGATAAAAGAGGCAGAGTGCATTGTCCAAGTAGAAGCGATCAGTGTGAGAAAGAATGAAGCAGATAAAAGGTTGGAGGCCTCCTTAAAAGCGATAGAGGAAATCAAGACTGCAACAAACTTGGCACTGAGAAACGCAGAGTCGGCAGATTCAGCAAAATCGGTGGTTGAGGGTGAACTTCGCAAGTGGCGTCAAGAAGAACAAACGGTGGTGGTAGGCGAGTCATCACAGCCACCCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009987 GO:0016043 GO:0019750 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WEMBL

Protein Analysis

577

Amino Acids

64.17

Weight (kDa)

5.14

Isoelectric Point (pI)

47.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	23 - 565	7.2e-43	Weak chloroplast movement under blue light

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12150 AT1G12150
fragaria_vesca	FvH4_3g00281 FvH4_3g00281
malus_domestica	MD05G1362200.v1.1 MD10G1339700.v1.1
prunus_persica	Prupe.4G003200_v2.0.a1
pyrus_communis	pycom05g32850 pycom05g32860 pycom10g28950
rosa_chinensis	RchiOBHm_Chr5g0000421
rosa_laevigata	RLG00000030865
rosa_multiflora	Rmu_co8243975.1_g000001
rosa_roxburghii	Rroxscaffold_1G00075740
rosa_rugosa	Rorug04G0383500
rosa_samantha	Rh5AG003400 Rh5BG004500 Rh5CG003600 Rh5DG003500
rosa_wichuraiana	Rw5G000340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1135
AccII	CGCG	2 cut(s)	15, 396
AciI	CCGC	9 cut(s)	13, 509, 552, 742, 1101, 1135, 1151, 1160, 1271
AclI	AACGTT	1 cut(s)	601
AclWI	GGATC	5 cut(s)	30, 660, 673, 806, 1161
AcoI	YGGCCR	2 cut(s)	3, 726
AcsI	RAATTY	1 cut(s)	1264
AcuI	CTGAAG	5 cut(s)	996, 1272, 1335, 1376, 1377
AcyI	GRCGYC	1 cut(s)	1681
AfaI	GTAC	2 cut(s)	482, 1414
AfiI	CCNNNNNNNGG	4 cut(s)	19, 534, 1018, 1368
AgeI	ACCGGT	1 cut(s)	1046
AgsI	TTSAA	1 cut(s)	437
AhlI	ACTAGT	1 cut(s)	1091
AjnI	CCWGG	1 cut(s)	1344
AjuI	GAANNNNNNNTTGG	2 cut(s)	443, 475
Alw21I	GWGCWC	7 cut(s)	85, 283, 525, 639, 989, 1010, 1403
Alw26I	GTCTC	2 cut(s)	194, 694
AlwI	GGATC	5 cut(s)	30, 660, 673, 806, 1161
AlwNI	CAGNNNCTG	3 cut(s)	47, 211, 1174
Ama87I	CYCGRG	1 cut(s)	276
AoxI	GGCC	6 cut(s)	3, 216, 726, 738, 1359, 1569
ApeKI	GCWGC	9 cut(s)	104, 374, 443, 572, 653, 676, 761, 961, 1388
ApoI	RAATTY	1 cut(s)	1264
AsiGI	ACCGGT	1 cut(s)	1046
AspLEI	GCGC	2 cut(s)	398, 1196
AspS9I	GGNCC	3 cut(s)	217, 463, 739
AsuC2I	CCSGG	2 cut(s)	220, 1369
AsuHPI	GGTGA	9 cut(s)	30, 134, 147, 223, 427, 487, 517, 1061, 1676
AvaI	CYCGRG	1 cut(s)	276
AvaII	GGWCC	1 cut(s)	463
AxyI	CCTNAGG	1 cut(s)	1013
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	665
BanII	GRGCYC	6 cut(s)	85, 525, 639, 989, 1010, 1345
BbsI	GAAGAC	1 cut(s)	786
Bbv12I	GWGCWC	7 cut(s)	85, 283, 525, 639, 989, 1010, 1403
BbvI	GCAGC	9 cut(s)	91, 361, 430, 559, 665, 688, 748, 948, 1400
BceAI	ACGGC	1 cut(s)	116
BciT130I	CCWGG	1 cut(s)	1346
BcnI	CCSGG	2 cut(s)	220, 1369
BcoDI	GTCTC	2 cut(s)	194, 694
BcuI	ACTAGT	1 cut(s)	1091
BfaI	CTAG	5 cut(s)	251, 314, 1092, 1410, 1732
BfmI	CTRYAG	1 cut(s)	962
BglII	AGATCT	1 cut(s)	829
BlpI	GCTNAGC	2 cut(s)	765, 1131
Bme1390I	CCNGG	3 cut(s)	220, 1346, 1369
Bme18I	GGWCC	1 cut(s)	463
BmeT110I	CYCGRG	1 cut(s)	276
BmgT120I	GGNCC	3 cut(s)	217, 463, 739
BmiI	GGNNCC	1 cut(s)	667
BmrFI	CCNGG	3 cut(s)	220, 1346, 1369
BmrI	ACTGGG	1 cut(s)	1428
BmsI	GCATC	4 cut(s)	161, 496, 538, 1309
BmuI	ACTGGG	1 cut(s)	1428
BpiI	GAAGAC	1 cut(s)	786
BplI	GAGNNNNNCTC	2 cut(s)	1390, 1422
BpmI	CTGGAG	1 cut(s)	854
Bpu1102I	GCTNAGC	2 cut(s)	765, 1131
BpuEI	CTTGAG	2 cut(s)	782, 1124
BpuMI	CCSGG	2 cut(s)	220, 1369
BsaHI	GRCGYC	1 cut(s)	1681
BsaJI	CCNNGG	4 cut(s)	234, 555, 1125, 1344
BsaWI	WCCGGW	1 cut(s)	1046
BsaXI	ACNNNNNCTCC	2 cut(s)	67, 97
Bsc4I	CCNNNNNNNGG	4 cut(s)	19, 534, 1018, 1368
Bse118I	RCCGGY	1 cut(s)	1046
Bse1I	ACTGG	6 cut(s)	195, 573, 1080, 1206, 1308, 1423
Bse21I	CCTNAGG	1 cut(s)	1013
Bse3DI	GCAATG	1 cut(s)	372
BseBI	CCWGG	1 cut(s)	1346
BseDI	CCNNGG	4 cut(s)	234, 555, 1125, 1344
BseGI	GGATG	1 cut(s)	1036
BseLI	CCNNNNNNNGG	4 cut(s)	19, 534, 1018, 1368
BseMI	GCAATG	1 cut(s)	372
BseMII	CTCAG	6 cut(s)	624, 1027, 1069, 1122, 1482, 1610
BseNI	ACTGG	6 cut(s)	195, 573, 1080, 1206, 1308, 1423
BseXI	GCAGC	9 cut(s)	91, 361, 430, 559, 665, 688, 748, 948, 1400
Bsh1236I	CGCG	2 cut(s)	15, 396
BshFI	GGCC	6 cut(s)	5, 218, 728, 740, 1361, 1571
BshTI	ACCGGT	1 cut(s)	1046
BsiHKAI	GWGCWC	7 cut(s)	85, 283, 525, 639, 989, 1010, 1403
BsiHKCI	CYCGRG	1 cut(s)	276
BsiSI	CCGG	4 cut(s)	220, 535, 1047, 1368
BslFI	GGGAC	1 cut(s)	1384
BslI	CCNNNNNNNGG	4 cut(s)	19, 534, 1018, 1368
BsmAI	GTCTC	2 cut(s)	194, 694
BsmBI	CGTCTC	1 cut(s)	694
BsmFI	GGGAC	1 cut(s)	1384
BsnI	GGCC	6 cut(s)	5, 218, 728, 740, 1361, 1571
BsoBI	CYCGRG	1 cut(s)	276
Bsp1286I	GDGCHC	8 cut(s)	85, 283, 525, 639, 989, 1010, 1345, 1403
Bsp143I	GATC	8 cut(s)	22, 333, 665, 811, 829, 1153, 1425, 1530
Bsp1720I	GCTNAGC	2 cut(s)	765, 1131
BspACI	CCGC	9 cut(s)	13, 509, 552, 742, 1101, 1135, 1151, 1160, 1271
BspANI	GGCC	6 cut(s)	5, 218, 728, 740, 1361, 1571
BspCNI	CTCAG	6 cut(s)	625, 1026, 1068, 1123, 1483, 1611
BspFNI	CGCG	2 cut(s)	15, 396
BspHI	TCATGA	1 cut(s)	1378
BspLI	GGNNCC	1 cut(s)	667
BspMAI	CTGCAG	1 cut(s)	966
BspPI	GGATC	5 cut(s)	30, 660, 673, 806, 1161
BsrBI	CCGCTC	1 cut(s)	1135
BsrDI	GCAATG	1 cut(s)	372
BsrFI	RCCGGY	1 cut(s)	1046
BsrI	ACTGG	6 cut(s)	195, 573, 1080, 1206, 1308, 1423
BssAI	RCCGGY	1 cut(s)	1046
BssECI	CCNNGG	4 cut(s)	234, 555, 1125, 1344
BssMI	GATC	8 cut(s)	22, 333, 665, 811, 829, 1153, 1425, 1530
BssNI	GRCGYC	1 cut(s)	1681
BssT1I	CCWWGG	2 cut(s)	234, 555
Bst2UI	CCWGG	1 cut(s)	1346
Bst4CI	ACNGT	3 cut(s)	493, 859, 1699
Bst6I	CTCTTC	5 cut(s)	405, 975, 996, 1031, 1140
BstACI	GRCGYC	1 cut(s)	1681
BstC8I	GCNNGC	3 cut(s)	394, 714, 742
BstDEI	CTNAG	8 cut(s)	303, 633, 765, 1013, 1055, 1131, 1491, 1619
BstEII	GGTNACC	1 cut(s)	493
BstF5I	GGATG	1 cut(s)	1036
BstFNI	CGCG	2 cut(s)	15, 396
BstHHI	GCGC	2 cut(s)	398, 1196
BstKTI	GATC	8 cut(s)	25, 336, 668, 814, 832, 1156, 1428, 1533
BstMAI	GTCTC	2 cut(s)	194, 694
BstMBI	GATC	8 cut(s)	22, 333, 665, 811, 829, 1153, 1425, 1530
BstNI	CCWGG	1 cut(s)	1346
BstNSI	RCATGY	1 cut(s)	701
BstPI	GGTNACC	1 cut(s)	493
BstSCI	CCNGG	3 cut(s)	218, 1344, 1367
BstSFI	CTRYAG	1 cut(s)	962
BstUI	CGCG	2 cut(s)	15, 396
BstV1I	GCAGC	9 cut(s)	91, 361, 430, 559, 665, 688, 748, 948, 1400
BstV2I	GAAGAC	1 cut(s)	786
BstX2I	RGATCY	2 cut(s)	665, 829
BstXI	CCANNNNNNTGG	1 cut(s)	406
BstYI	RGATCY	2 cut(s)	665, 829
Bsu36I	CCTNAGG	1 cut(s)	1013
BsuRI	GGCC	6 cut(s)	5, 218, 728, 740, 1361, 1571
BtsCI	GGATG	1 cut(s)	1036
BtsIMutI	CAGTG	5 cut(s)	630, 864, 1301, 1540, 1616
Cac8I	GCNNGC	3 cut(s)	394, 714, 742
CaiI	CAGNNNCTG	3 cut(s)	47, 211, 1174
CciI	TCATGA	1 cut(s)	1378
CfoI	GCGC	2 cut(s)	398, 1196
Cfr10I	RCCGGY	1 cut(s)	1046
Cfr13I	GGNCC	3 cut(s)	217, 463, 739
CseI	GACGC	1 cut(s)	1670
Csp6I	GTAC	2 cut(s)	481, 1413
CspAI	ACCGGT	1 cut(s)	1046
CspCI	CAANNNNNGTGG	4 cut(s)	705, 740, 1635, 1670
CviAII	CATG	6 cut(s)	196, 467, 658, 698, 899, 1379
CviQI	GTAC	2 cut(s)	481, 1413
DdeI	CTNAG	8 cut(s)	303, 633, 765, 1013, 1055, 1131, 1491, 1619
DpnI	GATC	8 cut(s)	24, 335, 667, 813, 831, 1155, 1427, 1532
DpnII	GATC	8 cut(s)	22, 333, 665, 811, 829, 1153, 1425, 1530
EaeI	YGGCCR	2 cut(s)	3, 726
Eam1104I	CTCTTC	5 cut(s)	405, 975, 996, 1031, 1140
EarI	CTCTTC	5 cut(s)	405, 975, 996, 1031, 1140
EciI	GGCGGA	1 cut(s)	1166
Ecl136II	GAGCTC	5 cut(s)	83, 523, 637, 987, 1008
Eco130I	CCWWGG	2 cut(s)	234, 555
Eco147I	AGGCCT	2 cut(s)	1361, 1571
Eco24I	GRGCYC	6 cut(s)	85, 525, 639, 989, 1010, 1345
Eco47I	GGWCC	1 cut(s)	463
Eco53kI	GAGCTC	5 cut(s)	83, 523, 637, 987, 1008
Eco57I	CTGAAG	5 cut(s)	996, 1272, 1335, 1376, 1377
Eco81I	CCTNAGG	1 cut(s)	1013
Eco88I	CYCGRG	1 cut(s)	276
Eco91I	GGTNACC	1 cut(s)	493
EcoICRI	GAGCTC	5 cut(s)	83, 523, 637, 987, 1008
EcoO65I	GGTNACC	1 cut(s)	493
EcoRII	CCWGG	1 cut(s)	1344
EcoT14I	CCWWGG	2 cut(s)	234, 555
EcoT38I	GRGCYC	6 cut(s)	85, 525, 639, 989, 1010, 1345
ErhI	CCWWGG	2 cut(s)	234, 555
Esp3I	CGTCTC	1 cut(s)	694
FaeI	CATG	6 cut(s)	199, 470, 661, 701, 902, 1382
FaiI	YATR	9 cut(s)	197, 468, 485, 659, 695, 699, 900, 1380, 1449
FaqI	GGGAC	1 cut(s)	1384
FatI	CATG	6 cut(s)	195, 466, 657, 697, 898, 1378
FauI	CCCGC	1 cut(s)	749
FokI	GGATG	1 cut(s)	1043
FriOI	GRGCYC	6 cut(s)	85, 525, 639, 989, 1010, 1345
FspBI	CTAG	5 cut(s)	251, 314, 1092, 1410, 1732
GlaI	GCGC	2 cut(s)	397, 1195
GsuI	CTGGAG	1 cut(s)	854
HaeIII	GGCC	6 cut(s)	5, 218, 728, 740, 1361, 1571
HapII	CCGG	4 cut(s)	220, 535, 1047, 1368
HgaI	GACGC	1 cut(s)	1670
HhaI	GCGC	2 cut(s)	398, 1196
Hin1I	GRCGYC	1 cut(s)	1681
Hin1II	CATG	6 cut(s)	199, 470, 661, 701, 902, 1382
Hin6I	GCGC	2 cut(s)	396, 1194
HinP1I	GCGC	2 cut(s)	396, 1194
HincII	GTYRAC	2 cut(s)	73, 616
HindII	GTYRAC	2 cut(s)	73, 616
HindIII	AAGCTT	2 cut(s)	842, 1483
HinfI	GANTC	8 cut(s)	44, 350, 403, 428, 914, 1631, 1640, 1712
HpaI	GTTAAC	1 cut(s)	616
HpaII	CCGG	4 cut(s)	220, 535, 1047, 1368
HphI	GGTGA	9 cut(s)	30, 134, 147, 223, 427, 487, 517, 1061, 1676
Hpy166II	GTNNAC	4 cut(s)	73, 616, 1052, 1667
Hpy188I	TCNGA	9 cut(s)	178, 289, 622, 641, 907, 996, 1098, 1183, 1396
Hpy188III	TCNNGA	8 cut(s)	407, 815, 833, 1057, 1168, 1379, 1597, 1685
Hpy8I	GTNNAC	4 cut(s)	73, 616, 1052, 1667
HpyAV	CCTTC	4 cut(s)	97, 431, 1351, 1465
HpyCH4III	ACNGT	3 cut(s)	493, 859, 1699
HpyCH4IV	ACGT	2 cut(s)	9, 601
HpyCH4V	TGCA	9 cut(s)	50, 470, 653, 661, 964, 1301, 1322, 1512, 1604
HpyF3I	CTNAG	8 cut(s)	303, 633, 765, 1013, 1055, 1131, 1491, 1619
HpySE526I	ACGT	2 cut(s)	9, 601
Hsp92I	GRCGYC	1 cut(s)	1681
Hsp92II	CATG	6 cut(s)	199, 470, 661, 701, 902, 1382
HspAI	GCGC	2 cut(s)	396, 1194
KspAI	GTTAAC	1 cut(s)	616
Kzo9I	GATC	8 cut(s)	22, 333, 665, 811, 829, 1153, 1425, 1530
LmnI	GCTCC	5 cut(s)	88, 642, 937, 996, 1013
Lsp1109I	GCAGC	9 cut(s)	91, 361, 430, 559, 665, 688, 748, 948, 1400
LweI	GCATC	4 cut(s)	161, 496, 538, 1309
MaeI	CTAG	5 cut(s)	251, 314, 1092, 1410, 1732
MaeII	ACGT	2 cut(s)	9, 601
MaeIII	GTNAC	3 cut(s)	493, 628, 928
MalI	GATC	8 cut(s)	24, 335, 667, 813, 831, 1155, 1427, 1532
MbiI	CCGCTC	1 cut(s)	1135
MboI	GATC	8 cut(s)	22, 333, 665, 811, 829, 1153, 1425, 1530
MfeI	CAATTG	1 cut(s)	432
MflI	RGATCY	2 cut(s)	665, 829
MhlI	GDGCHC	8 cut(s)	85, 283, 525, 639, 989, 1010, 1345, 1403
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	6 cut(s)	432, 458, 648, 1022, 1264, 1430
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	344, 908, 1640, 1721
MmeI	TCCRAC	3 cut(s)	604, 645, 1545
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	240, 615, 1577
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	3 cut(s)	1103, 1271, 1354
MspI	CCGG	4 cut(s)	220, 535, 1047, 1368
MspR9I	CCNGG	3 cut(s)	220, 1346, 1369
MunI	CAATTG	1 cut(s)	432
MvaI	CCWGG	1 cut(s)	1346
MvnI	CGCG	2 cut(s)	15, 396
NciI	CCSGG	2 cut(s)	220, 1369
NdeII	GATC	8 cut(s)	22, 333, 665, 811, 829, 1153, 1425, 1530
NlaIII	CATG	6 cut(s)	199, 470, 661, 701, 902, 1382
NlaIV	GGNNCC	1 cut(s)	667
NmeAIII	GCCGAG	2 cut(s)	1150, 1234
NmuCI	GTSAC	3 cut(s)	493, 628, 928
NspI	RCATGY	1 cut(s)	701
PaeR7I	CTCGAG	1 cut(s)	276
PagI	TCATGA	1 cut(s)	1378
PceI	AGGCCT	2 cut(s)	1361, 1571
PcsI	WCGNNNNNNNCGW	1 cut(s)	1678
PfeI	GAWTC	4 cut(s)	44, 403, 428, 1640
PflFI	GACNNNGTC	1 cut(s)	626
PfoI	TCCNGGA	1 cut(s)	1367
PinAI	ACCGGT	1 cut(s)	1046
PleI	GAGTC	4 cut(s)	344, 908, 1639, 1720
PpsI	GAGTC	4 cut(s)	344, 908, 1639, 1720
Psp124BI	GAGCTC	5 cut(s)	85, 525, 639, 989, 1010
Psp1406I	AACGTT	1 cut(s)	601
Psp6I	CCWGG	1 cut(s)	1344
PspEI	GGTNACC	1 cut(s)	493
PspGI	CCWGG	1 cut(s)	1344
PspN4I	GGNNCC	1 cut(s)	667
PspPI	GGNCC	3 cut(s)	217, 463, 739
PspXI	VCTCGAGB	1 cut(s)	276
PstI	CTGCAG	1 cut(s)	966
PstNI	CAGNNNCTG	3 cut(s)	47, 211, 1174
PsuI	RGATCY	2 cut(s)	665, 829
PsyI	GACNNNGTC	1 cut(s)	626
PvuII	CAGCTG	1 cut(s)	1354
RsaI	GTAC	2 cut(s)	482, 1414
RsaNI	GTAC	2 cut(s)	481, 1413
SacI	GAGCTC	5 cut(s)	85, 525, 639, 989, 1010
SaqAI	TTAA	3 cut(s)	240, 615, 1577
Sau3AI	GATC	8 cut(s)	22, 333, 665, 811, 829, 1153, 1425, 1530
Sau96I	GGNCC	3 cut(s)	217, 463, 739
SchI	GAGTC	4 cut(s)	344, 908, 1640, 1721
ScrFI	CCNGG	3 cut(s)	220, 1346, 1369
SduI	GDGCHC	8 cut(s)	85, 283, 525, 639, 989, 1010, 1345, 1403
SfaNI	GCATC	4 cut(s)	161, 496, 538, 1309
SfcI	CTRYAG	1 cut(s)	962
Sfr274I	CTCGAG	1 cut(s)	276
SinI	GGWCC	1 cut(s)	463
SlaI	CTCGAG	1 cut(s)	276
SmlI	CTYRAG	3 cut(s)	276, 797, 1139
SmoI	CTYRAG	3 cut(s)	276, 797, 1139
SpeI	ACTAGT	1 cut(s)	1091
Sse9I	AATT	6 cut(s)	432, 458, 648, 1022, 1264, 1430
SseBI	AGGCCT	2 cut(s)	1361, 1571
SsiI	CCGC	9 cut(s)	13, 509, 552, 742, 1101, 1135, 1151, 1160, 1271
SspMI	CTAG	5 cut(s)	251, 314, 1092, 1410, 1732
SstI	GAGCTC	5 cut(s)	85, 525, 639, 989, 1010
StuI	AGGCCT	2 cut(s)	1361, 1571
StyD4I	CCNGG	3 cut(s)	218, 1344, 1367
StyI	CCWWGG	2 cut(s)	234, 555
TaaI	ACNGT	3 cut(s)	493, 859, 1699
TaiI	ACGT	2 cut(s)	12, 604
TaqI	TCGA	2 cut(s)	277, 348
TasI	AATT	6 cut(s)	432, 458, 648, 1022, 1264, 1430
TatI	WGTACW	2 cut(s)	480, 1412
TauI	GCSGC	4 cut(s)	512, 554, 1138, 1163
TfiI	GAWTC	4 cut(s)	44, 403, 428, 1640
Tru1I	TTAA	3 cut(s)	240, 615, 1577
Tru9I	TTAA	3 cut(s)	240, 615, 1577
TscAI	CASTG	5 cut(s)	637, 864, 1308, 1540, 1623
TseFI	GTSAC	3 cut(s)	493, 628, 928
TseI	GCWGC	9 cut(s)	104, 374, 443, 572, 653, 676, 761, 961, 1388
Tsp45I	GTSAC	3 cut(s)	493, 628, 928
TspDTI	ATGAA	5 cut(s)	201, 383, 960, 1232, 1563
TspRI	CASTG	5 cut(s)	637, 864, 1308, 1540, 1623
Tth111I	GACNNNGTC	1 cut(s)	626
VpaK11BI	GGWCC	1 cut(s)	463
XapI	RAATTY	1 cut(s)	1264
XceI	RCATGY	1 cut(s)	701
XhoI	CTCGAG	1 cut(s)	276
XspI	CTAG	5 cut(s)	251, 314, 1092, 1410, 1732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.