Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0012724

Physical Location & Seq

Genomic Coordinates Forward (+)

1675848 .. 1679341

Gene Structure 3494 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG023100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGGGAACCAGCTTCCAAGGGGTTGTGTTGTGTCTGTTCGTTTCGAGCTTGTTGTTGTCTCTGGTGTCCTGTGCAGCCCCACCCAGTGATGGGTTGTTTAGGATTGGACTGAAAAAGGTGAAGTTGGATGCGAATGAGCGGCTTGCTGCAGCGGTTGAATACAGGATTAATGGGGAGGATTTGAGGGGTTCGATTAGGAAGTATGGTTTCCCTTCTAATCTGGGAGACGCTGAGGGTGAGGATGTTGATATTGTCAAATTAAAGAACTACTTGGATGCTCAGTACTATGGTGAGATAGCTATTGGCACTCCCCCTCAGCCGTTCACTGTGATTTTCGACACTGGCAGCTCTAATCTGTGGGTTCCGTCGAACAAGTGTTATTTCTCGGTTGCGTGCTACTTCCATGCCAAGTACAAGTCAAGCCAATCGAGTACATACAAGAAGAATGGGAAATCTGCTTCCATCCAGTATGGTACTGGAGCTATTTCAGGTTTCTTTAGTAATGACAATGTTAAAGTTGGGGACCTCGTCGTGAAAGACCAGGAATTTATTGAAGCAACTAGTGAGCCTGGTCTAACATTTTTGGCTGCCAAGTTTGATGGGTTATTAGGCCTTGGATTTCAAGAGATTTCGGTTGGAAATGCTATCCCAGTGTGGTACAACATGATTAAGCAAGGGCTTATCAAGGAACCAGTGTTTTCTTTTTGGATGAACCGCAATGCAGCAGCACAAGAAGGTGGTGAACTTGTGTTTGGGGGAGTTGATCCCCATCACTTCAAGGGAAAGCACACATATGTTCCTGTAACACAGAAAGGCTATTGGCAGTTCGACATGGGTGATGTTCTTATTGGTGATAAACCAACTGGATATTGTGCTGGTGGTTGTCATGCAATTGCAGATTCTGGAACTTCTCTTTTGGCTGGTCCAACGACAGTGGTTACATTGATAAATAAAGCCATTGGAGCCAATGGGGTTGTTAGCCAGGAATGCAAGGCCGTTGTTCAACAGTATGGTCAAACCATTATGGAGCTGCTCTTGGCTGAGGTTCAACCAAAGAAGATCTGCTCCCAAATTGGAGTGTGCACCTTTGATGGGACTCGTAGTGTTAGTATGGGCATTGAGAGTGTGGTGGATAAGAACCGTGGAAAATCTTCTGGAGTTCTTCATGATGCTTCATGCTCTGCTTGTGAGATGGCAGTTGTCTGGATGCAAAACCAGCTTAAGCAGAATCAGACCCAGGATTATATTTTGAACTATGTTAATGAGCTTTGTGATCAAATGCCAAGCCCAAATGGACAATCGGCTGTTGACTGCCAACGTCTTTCTTCCATGCCTACCATTTCCTTCACCATTGGTGGTAAAGTTTTTCCACTCACCCCAGAGGAGTATGTACTCAAGGTGGGCGAGGGTCCACAAGCCCAGTGCATAAGTGGCTTCACTAGTATGGACATTCCTCCTCCCCGGGGACCTCTCTGGATCCTGGGAGACGTCTTCATGGGTCGCTACCACACTGTCTTTGATTATGGTAATATGAGAGTTGGATTTGCAAAGGCTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0010035 GO:0010038 GO:0016787 GO:0019538 GO:0030163 GO:0042221 GO:0043170 GO:0044238 GO:0046686 GO:0050896 GO:0070001 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04071 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04140 map04142 map04210 map04915 map05152

Pfam Domains

Protein Families

Asp SapB_1 SapB_2

Protein Analysis

519

Amino Acids

56.15

Weight (kDa)

5.88

Isoelectric Point (pI)

32.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	94 - 518	2.5e-117	Eukaryotic aspartyl protease
TAXi_N	PF14543	95 - 253	7e-12	Xylanase inhibitor N-terminal
SapB_2	PF03489	328 - 361	8.5e-12	Saposin-like type B, region 2
SapB_1	PF05184	392 - 428	1.2e-13	Saposin-like type B, region 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012724)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04460 AT4G04460
fragaria_vesca	FvH4_3g01710
malus_domestica	MD05G1349700.v1.1 MD10G1324400.v1.1
prunus_persica	Prupe.4G017700_v2.0.a1 Prupe.4G017700_v2.0.a1
pyrus_communis	pycom05g31730 pycom10g27480
rosa_chinensis	RchiOBHm_Chr5g0002571
rosa_laevigata	RLG00000031040
rosa_roxburghii	Rroxscaffold_1G00073340
rosa_rugosa	Rorug04G0397000
rosa_samantha	Rh5AG020400 Rh5BG023100 Rh5CG022400 Rh5DG021500
rosa_wichuraiana	Rw5G001880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1491
AccBSI	CCGCTC	1 cut(s)	139
AciI	CCGC	3 cut(s)	139, 152, 715
AclWI	GGATC	3 cut(s)	758, 1471, 1484
AcsI	RAATTY	1 cut(s)	545
AcyI	GRCGYC	1 cut(s)	1488
AdeI	CACNNNGTG	1 cut(s)	86
AfaI	GTAC	6 cut(s)	284, 413, 433, 475, 659, 1392
AfiI	CCNNNNNNNGG	4 cut(s)	89, 90, 1092, 1463
AflII	CTTAAG	1 cut(s)	1220
AgsI	TTSAA	7 cut(s)	158, 554, 623, 778, 1004, 1049, 1252
AhlI	ACTAGT	2 cut(s)	560, 1439
AjnI	CCWGG	5 cut(s)	540, 568, 981, 1236, 1479
AjuI	GAANNNNNNNTTGG	2 cut(s)	735, 767
AluBI	AGCT	8 cut(s)	12, 48, 299, 348, 482, 1030, 1219, 1267
AluI	AGCT	8 cut(s)	12, 48, 299, 348, 482, 1030, 1219, 1267
Alw21I	GWGCWC	1 cut(s)	1085
Alw26I	GTCTC	3 cut(s)	63, 219, 1479
Alw44I	GTGCAC	1 cut(s)	1081
AlwI	GGATC	3 cut(s)	758, 1471, 1484
AlwNI	CAGNNNCTG	1 cut(s)	902
Ama87I	CYCGRG	1 cut(s)	1461
AoxI	GGCC	2 cut(s)	610, 993
ApaLI	GTGCAC	1 cut(s)	1081
ApeKI	GCWGC	9 cut(s)	74, 146, 149, 345, 587, 722, 725, 1030, 1553
ApoI	RAATTY	1 cut(s)	545
AseI	ATTAAT	1 cut(s)	168
Asp700I	GAANNNNTTC	1 cut(s)	1150
AspS9I	GGNCC	4 cut(s)	523, 923, 1409, 1466
AsuC2I	CCSGG	2 cut(s)	1462, 1463
AsuHPI	GGTGA	8 cut(s)	130, 248, 302, 752, 848, 863, 1339, 1366
AvaI	CYCGRG	1 cut(s)	1461
AvaII	GGWCC	4 cut(s)	523, 923, 1409, 1466
BaeGI	GKGCMC	1 cut(s)	1085
BamHI	GGATCC	1 cut(s)	1476
BbsI	GAAGAC	1 cut(s)	1483
Bbv12I	GWGCWC	1 cut(s)	1085
BbvCI	CCTCAGC	3 cut(s)	231, 315, 1041
BbvI	GCAGC	9 cut(s)	86, 133, 161, 357, 574, 734, 737, 1017, 1540
BccI	CCATC	6 cut(s)	83, 470, 593, 777, 1085, 1186
BceAI	ACGGC	2 cut(s)	304, 980
BciT130I	CCWGG	5 cut(s)	542, 570, 983, 1238, 1481
BclI	TGATCA	1 cut(s)	1273
BcnI	CCSGG	2 cut(s)	1462, 1463
BcoDI	GTCTC	3 cut(s)	63, 219, 1479
BcuI	ACTAGT	2 cut(s)	560, 1439
BfaI	CTAG	2 cut(s)	561, 1440
BfmI	CTRYAG	1 cut(s)	147
BfrI	CTTAAG	1 cut(s)	1220
BglII	AGATCT	1 cut(s)	1059
BmcAI	AGTACT	1 cut(s)	284
Bme1390I	CCNGG	7 cut(s)	542, 570, 983, 1238, 1462, 1463, 1481
Bme18I	GGWCC	4 cut(s)	523, 923, 1409, 1466
BmeT110I	CYCGRG	1 cut(s)	1461
BmgT120I	GGNCC	4 cut(s)	523, 923, 1409, 1466
BmiI	GGNNCC	8 cut(s)	7, 363, 524, 690, 964, 1410, 1467, 1478
BmrFI	CCNGG	7 cut(s)	542, 570, 983, 1238, 1462, 1463, 1481
BmrI	ACTGGG	3 cut(s)	78, 644, 1414
BmsI	GCATC	4 cut(s)	118, 265, 1159, 1197
BmuI	ACTGGG	3 cut(s)	78, 644, 1414
BpiI	GAAGAC	1 cut(s)	1483
BpmI	CTGGAG	2 cut(s)	498, 1176
Bpu10I	CCTNAGC	3 cut(s)	231, 315, 1041
BpuEI	CTTGAG	1 cut(s)	1379
BpuMI	CCSGG	2 cut(s)	1462, 1463
BsaBI	GATNNNNATC	1 cut(s)	768
BsaHI	GRCGYC	1 cut(s)	1488
BsaJI	CCNNGG	8 cut(s)	16, 613, 1141, 1236, 1460, 1461, 1462, 1480
Bsc4I	CCNNNNNNNGG	4 cut(s)	89, 90, 1092, 1463
Bse1I	ACTGG	8 cut(s)	84, 346, 466, 481, 650, 692, 868, 1420
Bse3DI	GCAATG	1 cut(s)	724
Bse8I	GATNNNNATC	1 cut(s)	768
BseBI	CCWGG	5 cut(s)	542, 570, 983, 1238, 1481
BseDI	CCNNGG	8 cut(s)	16, 613, 1141, 1236, 1460, 1461, 1462, 1480
BseGI	GGATG	6 cut(s)	133, 247, 280, 462, 714, 1212
BseJI	GATNNNNATC	1 cut(s)	768
BseLI	CCNNNNNNNGG	4 cut(s)	89, 90, 1092, 1463
BseMI	GCAATG	1 cut(s)	724
BseMII	CTCAG	4 cut(s)	222, 293, 329, 1032
BseNI	ACTGG	8 cut(s)	84, 346, 466, 481, 650, 692, 868, 1420
BseRI	GAGGAG	2 cut(s)	1397, 1446
BseSI	GKGCMC	1 cut(s)	1085
BseXI	GCAGC	9 cut(s)	86, 133, 161, 357, 574, 734, 737, 1017, 1540
BsgI	GTGCAG	1 cut(s)	93
BshFI	GGCC	2 cut(s)	612, 995
BsiHKAI	GWGCWC	1 cut(s)	1085
BsiHKCI	CYCGRG	1 cut(s)	1461
BsiSI	CCGG	1 cut(s)	1462
BslFI	GGGAC	3 cut(s)	536, 1108, 1479
BslI	CCNNNNNNNGG	4 cut(s)	89, 90, 1092, 1463
BsmAI	GTCTC	3 cut(s)	63, 219, 1479
BsmBI	CGTCTC	2 cut(s)	219, 1479
BsmFI	GGGAC	3 cut(s)	536, 1108, 1479
BsmI	GAATGC	1 cut(s)	992
BsnI	GGCC	2 cut(s)	612, 995
BsoBI	CYCGRG	1 cut(s)	1461
Bsp1286I	GDGCHC	1 cut(s)	1085
Bsp143I	GATC	4 cut(s)	763, 1059, 1273, 1476
BspACI	CCGC	3 cut(s)	139, 152, 715
BspANI	GGCC	2 cut(s)	612, 995
BspCNI	CTCAG	4 cut(s)	223, 292, 328, 1033
BspHI	TCATGA	1 cut(s)	1165
BspLI	GGNNCC	8 cut(s)	7, 363, 524, 690, 964, 1410, 1467, 1478
BspMAI	CTGCAG	1 cut(s)	151
BspPI	GGATC	3 cut(s)	758, 1471, 1484
BspTI	CTTAAG	1 cut(s)	1220
BsrBI	CCGCTC	1 cut(s)	139
BsrDI	GCAATG	1 cut(s)	724
BsrI	ACTGG	8 cut(s)	84, 346, 466, 481, 650, 692, 868, 1420
BssECI	CCNNGG	8 cut(s)	16, 613, 1141, 1236, 1460, 1461, 1462, 1480
BssMI	GATC	4 cut(s)	763, 1059, 1273, 1476
BssNI	GRCGYC	1 cut(s)	1488
BssT1I	CCWWGG	2 cut(s)	16, 613
Bst2UI	CCWGG	5 cut(s)	542, 570, 983, 1238, 1481
Bst4CI	ACNGT	5 cut(s)	328, 934, 1008, 1142, 1513
BstACI	GRCGYC	1 cut(s)	1488
BstAFI	CTTAAG	1 cut(s)	1220
BstAPI	GCANNNNNTGC	1 cut(s)	1553
BstC8I	GCNNGC	2 cut(s)	144, 394
BstDEI	CTNAG	4 cut(s)	231, 279, 315, 1041
BstDSI	CCRYGG	1 cut(s)	1141
BstF5I	GGATG	6 cut(s)	133, 247, 280, 462, 714, 1212
BstKTI	GATC	4 cut(s)	766, 1062, 1276, 1479
BstMAI	GTCTC	3 cut(s)	63, 219, 1479
BstMBI	GATC	4 cut(s)	763, 1059, 1273, 1476
BstMWI	GCNNNNNNNGC	5 cut(s)	962, 987, 1216, 1431, 1553
BstNI	CCWGG	5 cut(s)	542, 570, 983, 1238, 1481
BstSCI	CCNGG	7 cut(s)	540, 568, 981, 1236, 1460, 1461, 1479
BstSFI	CTRYAG	1 cut(s)	147
BstSLI	GKGCMC	1 cut(s)	1085
BstV1I	GCAGC	9 cut(s)	86, 133, 161, 357, 574, 734, 737, 1017, 1540
BstV2I	GAAGAC	1 cut(s)	1483
BstX2I	RGATCY	2 cut(s)	1059, 1476
BstYI	RGATCY	2 cut(s)	1059, 1476
BsuRI	GGCC	2 cut(s)	612, 995
BtgI	CCRYGG	1 cut(s)	1141
BtsCI	GGATG	6 cut(s)	133, 247, 280, 462, 714, 1212
BtsIMutI	CAGTG	8 cut(s)	91, 324, 339, 657, 699, 939, 1427, 1509
Cac8I	GCNNGC	2 cut(s)	144, 394
CaiI	CAGNNNCTG	1 cut(s)	902
CciI	TCATGA	1 cut(s)	1165
Cfr13I	GGNCC	4 cut(s)	523, 923, 1409, 1466
Cfr9I	CCCGGG	1 cut(s)	1461
CseI	GACGC	1 cut(s)	236
Csp6I	GTAC	6 cut(s)	283, 412, 432, 474, 658, 1391
CspCI	CAANNNNNGTGG	2 cut(s)	915, 950
CviAII	CATG	8 cut(s)	404, 664, 832, 887, 1166, 1176, 1330, 1495
CviQI	GTAC	6 cut(s)	283, 412, 432, 474, 658, 1391
DdeI	CTNAG	4 cut(s)	231, 279, 315, 1041
DpnI	GATC	4 cut(s)	765, 1061, 1275, 1478
DpnII	GATC	4 cut(s)	763, 1059, 1273, 1476
DraIII	CACNNNGTG	1 cut(s)	86
Eco130I	CCWWGG	2 cut(s)	16, 613
Eco147I	AGGCCT	1 cut(s)	612
Eco47I	GGWCC	4 cut(s)	523, 923, 1409, 1466
Eco88I	CYCGRG	1 cut(s)	1461
EcoO109I	RGGNCCY	2 cut(s)	523, 1466
EcoRII	CCWGG	5 cut(s)	540, 568, 981, 1236, 1479
EcoT14I	CCWWGG	2 cut(s)	16, 613
ErhI	CCWWGG	2 cut(s)	16, 613
Esp3I	CGTCTC	2 cut(s)	219, 1479
FaeI	CATG	8 cut(s)	407, 667, 835, 890, 1169, 1179, 1333, 1498
FalI	AAGNNNNNCTT	2 cut(s)	254, 286
FaqI	GGGAC	3 cut(s)	536, 1108, 1479
FatI	CATG	8 cut(s)	403, 663, 831, 886, 1165, 1175, 1329, 1494
FauNDI	CATATG	1 cut(s)	793
FbaI	TGATCA	1 cut(s)	1273
FokI	GGATG	6 cut(s)	140, 254, 287, 449, 721, 1219
FspBI	CTAG	2 cut(s)	561, 1440
GsuI	CTGGAG	2 cut(s)	498, 1176
HaeIII	GGCC	2 cut(s)	612, 995
HapII	CCGG	1 cut(s)	1462
HgaI	GACGC	1 cut(s)	236
Hin1I	GRCGYC	1 cut(s)	1488
Hin1II	CATG	8 cut(s)	407, 667, 835, 890, 1169, 1179, 1333, 1498
HincII	GTYRAC	1 cut(s)	1309
HindII	GTYRAC	1 cut(s)	1309
HinfI	GANTC	3 cut(s)	899, 1096, 1228
HpaII	CCGG	1 cut(s)	1462
HphI	GGTGA	8 cut(s)	130, 248, 302, 752, 848, 863, 1339, 1366
Hpy166II	GTNNAC	5 cut(s)	324, 743, 1083, 1309, 1412
Hpy188I	TCNGA	1 cut(s)	1233
Hpy188III	TCNNGA	7 cut(s)	532, 623, 903, 1155, 1166, 1204, 1474
Hpy8I	GTNNAC	5 cut(s)	324, 743, 1083, 1309, 1412
Hpy99I	CGWCG	2 cut(s)	370, 533
HpyAV	CCTTC	3 cut(s)	222, 728, 1354
HpyCH4III	ACNGT	5 cut(s)	328, 934, 1008, 1142, 1513
HpyCH4IV	ACGT	2 cut(s)	1318, 1488
HpyF10VI	GCNNNNNNNGC	5 cut(s)	962, 987, 1216, 1431, 1553
HpyF3I	CTNAG	4 cut(s)	231, 279, 315, 1041
HpySE526I	ACGT	2 cut(s)	1318, 1488
Hsp92I	GRCGYC	1 cut(s)	1488
Hsp92II	CATG	8 cut(s)	407, 667, 835, 890, 1169, 1179, 1333, 1498
Ksp22I	TGATCA	1 cut(s)	1273
Kzo9I	GATC	4 cut(s)	763, 1059, 1273, 1476
LmnI	GCTCC	4 cut(s)	479, 962, 1027, 1070
Lsp1109I	GCAGC	9 cut(s)	86, 133, 161, 357, 574, 734, 737, 1017, 1540
LweI	GCATC	4 cut(s)	118, 265, 1159, 1197
MaeI	CTAG	2 cut(s)	561, 1440
MaeII	ACGT	2 cut(s)	1318, 1488
MaeIII	GTNAC	2 cut(s)	802, 937
MalI	GATC	4 cut(s)	765, 1061, 1275, 1478
MbiI	CCGCTC	1 cut(s)	139
MboI	GATC	4 cut(s)	763, 1059, 1273, 1476
MboII	GAAGA	6 cut(s)	454, 1069, 1143, 1154, 1317, 1483
MfeI	CAATTG	1 cut(s)	891
MflI	RGATCY	2 cut(s)	1059, 1476
MhlI	GDGCHC	1 cut(s)	1085
MluCI	AATT	4 cut(s)	257, 545, 891, 1071
MlyI	GAGTC	1 cut(s)	1090
MmeI	TCCRAC	4 cut(s)	105, 616, 950, 1519
MroXI	GAANNNNTTC	1 cut(s)	1150
MseI	TTAA	6 cut(s)	168, 260, 513, 669, 1221, 1260
MslI	CAYNNNNRTG	2 cut(s)	792, 1442
MspA1I	CMGCKG	1 cut(s)	152
MspCI	CTTAAG	1 cut(s)	1220
MspI	CCGG	1 cut(s)	1462
MspR9I	CCNGG	7 cut(s)	542, 570, 983, 1238, 1462, 1463, 1481
MunI	CAATTG	1 cut(s)	891
Mva1269I	GAATGC	1 cut(s)	992
MvaI	CCWGG	5 cut(s)	542, 570, 983, 1238, 1481
MwoI	GCNNNNNNNGC	5 cut(s)	962, 987, 1216, 1431, 1553
NciI	CCSGG	2 cut(s)	1462, 1463
NdeI	CATATG	1 cut(s)	793
NdeII	GATC	4 cut(s)	763, 1059, 1273, 1476
NlaIII	CATG	8 cut(s)	407, 667, 835, 890, 1169, 1179, 1333, 1498
NlaIV	GGNNCC	8 cut(s)	7, 363, 524, 690, 964, 1410, 1467, 1478
PagI	TCATGA	1 cut(s)	1165
PceI	AGGCCT	1 cut(s)	612
PctI	GAATGC	1 cut(s)	992
PdmI	GAANNNNTTC	1 cut(s)	1150
PfeI	GAWTC	2 cut(s)	899, 1228
PflFI	GACNNNGTC	1 cut(s)	527
PleI	GAGTC	1 cut(s)	1090
PpsI	GAGTC	1 cut(s)	1090
PpuMI	RGGWCCY	2 cut(s)	523, 1466
PshBI	ATTAAT	1 cut(s)	168
Psp5II	RGGWCCY	2 cut(s)	523, 1466
Psp6I	CCWGG	5 cut(s)	540, 568, 981, 1236, 1479
PspGI	CCWGG	5 cut(s)	540, 568, 981, 1236, 1479
PspN4I	GGNNCC	8 cut(s)	7, 363, 524, 690, 964, 1410, 1467, 1478
PspPI	GGNCC	4 cut(s)	523, 923, 1409, 1466
PspPPI	RGGWCCY	2 cut(s)	523, 1466
PstI	CTGCAG	1 cut(s)	151
PstNI	CAGNNNCTG	1 cut(s)	902
PsuI	RGATCY	2 cut(s)	1059, 1476
PsyI	GACNNNGTC	1 cut(s)	527
RsaI	GTAC	6 cut(s)	284, 413, 433, 475, 659, 1392
RsaNI	GTAC	6 cut(s)	283, 412, 432, 474, 658, 1391
RseI	CAYNNNNRTG	2 cut(s)	792, 1442
SaqAI	TTAA	6 cut(s)	168, 260, 513, 669, 1221, 1260
Sau3AI	GATC	4 cut(s)	763, 1059, 1273, 1476
Sau96I	GGNCC	4 cut(s)	523, 923, 1409, 1466
ScaI	AGTACT	1 cut(s)	284
SchI	GAGTC	1 cut(s)	1090
ScrFI	CCNGG	7 cut(s)	542, 570, 983, 1238, 1462, 1463, 1481
SduI	GDGCHC	1 cut(s)	1085
SfaNI	GCATC	4 cut(s)	118, 265, 1159, 1197
SfcI	CTRYAG	1 cut(s)	147
SinI	GGWCC	4 cut(s)	523, 923, 1409, 1466
SmaI	CCCGGG	1 cut(s)	1463
SmiMI	CAYNNNNRTG	2 cut(s)	792, 1442
SmlI	CTYRAG	2 cut(s)	1220, 1394
SmoI	CTYRAG	2 cut(s)	1220, 1394
SpeI	ACTAGT	2 cut(s)	560, 1439
Sse9I	AATT	4 cut(s)	257, 545, 891, 1071
SseBI	AGGCCT	1 cut(s)	612
SsiI	CCGC	3 cut(s)	139, 152, 715
SspMI	CTAG	2 cut(s)	561, 1440
StuI	AGGCCT	1 cut(s)	612
StyD4I	CCNGG	7 cut(s)	540, 568, 981, 1236, 1460, 1461, 1479
StyI	CCWWGG	2 cut(s)	16, 613
TaaI	ACNGT	5 cut(s)	328, 934, 1008, 1142, 1513
TaiI	ACGT	2 cut(s)	1321, 1491
TaqI	TCGA	6 cut(s)	44, 191, 336, 368, 428, 828
TasI	AATT	4 cut(s)	257, 545, 891, 1071
TatI	WGTACW	4 cut(s)	282, 411, 431, 1390
TauI	GCSGC	1 cut(s)	142
TfiI	GAWTC	2 cut(s)	899, 1228
Tru1I	TTAA	6 cut(s)	168, 260, 513, 669, 1221, 1260
Tru9I	TTAA	6 cut(s)	168, 260, 513, 669, 1221, 1260
TscAI	CASTG	8 cut(s)	91, 331, 346, 657, 699, 939, 1427, 1516
TseI	GCWGC	9 cut(s)	74, 146, 149, 345, 587, 722, 725, 1030, 1553
TspDTI	ATGAA	4 cut(s)	725, 1154, 1164, 1483
TspGWI	ACGGA	1 cut(s)	354
TspMI	CCCGGG	1 cut(s)	1461
TspRI	CASTG	8 cut(s)	91, 331, 346, 657, 699, 939, 1427, 1516
Tth111I	GACNNNGTC	1 cut(s)	527
Vha464I	CTTAAG	1 cut(s)	1220
VneI	GTGCAC	1 cut(s)	1081
VpaK11BI	GGWCC	4 cut(s)	523, 923, 1409, 1466
VspI	ATTAAT	1 cut(s)	168
XapI	RAATTY	1 cut(s)	545
XcmI	CCANNNNNNNNNTGG	2 cut(s)	473, 1427
XmaI	CCCGGG	1 cut(s)	1461
XmnI	GAANNNNTTC	1 cut(s)	1150
XspI	CTAG	2 cut(s)	561, 1440
ZraI	GACGTC	1 cut(s)	1489
ZrmI	AGTACT	1 cut(s)	284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.