Rh5BG384000

Smg8_Smg9

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
61213770 .. 61218977
5208 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG384000.1

Sequence Viewer

Length: 3627 bp
ATGGACCCACCCAACCCGAACCCGGCATCTATGCGGGTCCTAATCCGCCCACCCCCTTCTTCCTATTCTTCACCTCCTTCCCAAACCATTCCGATTCCCTCCTCCTCCTCCTCAGACCCTCCCTCCACCGACGGCGTCGTCGTGGTGGGCTTCATTGGGCCGCCGAGCACCGACCACTCGGCCCAGCTCATCAATCGGATCCTCGACTCCAACGTGTTCGGGTCGGGCAACCGGGACAAAAGCCTCGGCGTCGAGAACCAGGAGGAGCTCCGGGACTGGTTGAAGTTGCGGAGAATAAGTTATTACCATGAGGAGCAGAAGGGGATTCTGTTCTTGCAGTCTTGCTCCACGCTCTGCTCCGCCGTGGACGATAACGGGTTATTGGATTCCGGGTCGGGTTTCGACTCTGTGTTCGAAGAGCACGACTTTGGAGACCTCCAGGGGATGCTTTTCATGTTCTCTGTTTGCCATGTAATTATATATATTCTGGAGGGTTCACGGTTTGATACTCAACTCCTGAAAAAGTTTCGAGTGTTACAAGCTGCCAAGCATGCCTTGGCTCCATTAGTCAGACCCCGAAATATGCAGCCAACACCATCCAAGCCCTATTCGTCATCCTCACGGCCTACCACATCTGCAACCTCTTCGAAAAATTCTTCTCCAGGTAGAGGTGGTGGCATGTTGACTCGCAATGCTTCTGCCATTTCGCTAATGTCAGGTTTAGGTTCCTACACTTCTTTGTTTCCTGGACAGTGTACCCCAGTCACACTGTTTGTTTTCATTGATGATTTCTCTGATGTGCCAAATCCCAGCTCTAGTGTGGAGGACTCGGCAGATACATCCTCACTAAATCAGCCTTCTAGTTTGGGCACTTCAGCAAGGCCAAGTTTGCCTATTAAAGGTTCTGCTTCAGTGGTTGTGCTAGCACGCCCTGTGAGTAAATCTGAGGGTAGTTTTAGGAAGAAGCTGCAGTCATCCCTAGAAGCACAAATTCGTTTCTTAATTAAGAAGTGTGGAACACTCTCAGGTTCTGAAACTGGTCATGCTGGGTCTAGAAATGGTGGTGCTTCAAATTCTGCACCTCTGTTTTCACTTGATGCATCAAGGGCTGTTCTGTTGTTAGATAGGTATACAAATCAGAGAGGTGAGTCGCTTGAGTTTGCTACTGGCCTTGTTGAAGATGTTTTGAATGGGAAGGCAACCTCAGATTCTCTTTTGCTTGAAAGTCATGGTCAGAATGCAAGTAAAGAGGATATAATATCAGTGAAGGAGTTCATTTACAGGCAATCAGATATTCTAAGAGGGAGGGGGGGAGTTGTAACCAATTCCAATAGTGGTTCAGCTGCTGGTGTAGGTATGGCTGCTGTTGCTGCAGCCGTCGCTGCTGCGTCAGCAGCATCAGCTGCTGCATCAGCTACGTCTGGAAAGACATTTAATGCTCCAGAACTTCCAACTCTCCAAATTTGGTTATCTTCCAGTCAACAAATTCTTCATGGGGTTCTTTCAGCAAAAGGTGGCTGCATAGATGAAACTGAAATTAGTAAAAGAAAACCTCGGACGAGGAACACTATTCCACAGCCAGTTGAAGGAGTTTCTTCGAAAGGTATGGATCCCCTAGATTTAGCAGTATCTTGGTTGGAAAGTGGTAATAAAATGAACTCCAGATTTTCGACTTTGTGGTGTGAAAGGACCCTTCCAGCTGCCAAAGAGGTTTATCTGAAAGACTTGCCTGCTTGTTACCCAACTTCACAACATGAAGCTCATCTGGAGAAGGCTTTGCATGCTTTCCACTCAATGGTAAAAGGACATGCAGTGCAGCATTTTGCCAAAAAGTTGGAGGACGAGTGCACCTCCATCTGGAAATCTGGAAGGCAACTGTGTGATGCTGTTAGTTTGACTGGAAAACCATGTATGCACCAGAGACATAATGTTGATACTAATGAGTCACTCTCAGGAGCTACTGTGAAGCAACATTCCAGTGGATATGTTTTCCTTCATGCCTGTTCTTGTGGCCGTTCACGGAGATTACGATCTGATCCTTTTGACTTTGAATCAGCGAACATTACTTTTAGTTGCTTTCCGGACTGTGACAAGCTCCTCCCTACACTTCAATTACCTGAAGTAAGTAGTTCAGGGCCTATTCAATCTTCCTCATGGAGTTTGATTCGCATTGGGGGTGCAAGGTACTATGACCCTTATAAAGGCTTGCTTCAAAGCGGGTTCTGTTCAACTCAGAAGTTTCTTATGAAATGGACAATATCTATGGAGATACAGAATAGAGCAATCGATTTCACTGCCAAAGCAATGGATCAAGGTTCTGCAGTTAAGTCAGGTACGAACTTTAAGCTTGAATCTAAAGCTGATGTGCAGTTGCACTCGAAGGAGTTACAATCCAGAGTTGAAAGCCATAGAAAACCTGCAGAGGACACTGATGATAATAAAATCAGTTTTGGTAAAGGTCTACCCAACTTTACCATGAGGAAACCTTTTTCTGAGGTTGTTGCTGGAACAGCAGCTGCAGATTCAGGATTTCCTCCTATCCAGCTGAGGAAAAAATCTGCATCCAGTTTAGATAAGAGTTTCAAGCAAATTAGGTCAAGGGATCAGAGCACAGAGCAGAATAGTGATAAAGGAACTCAAAAATCTAGAGATGATTTACCTGTTCAAGAAACAGTGAGTGGGATCAGTAGCACACATGTTGATCCTTATCTACGAATAGGTAGTAATGTGGTCCCTATGAACCTGAATGGCGTTGAAAGGTCCAAACCGGACCCTTCTTTTAAGCATGTAACAGTGTATGTTGGGTTTGAGCATGAGTGCCCGCATGGCCATCGTTTTCTATTAAATCCAGAGAATCTTAATGAGCTTGGGTCCTCATATCAGTTGCCTGAAGAATCTCAAGTGAAATCAGACCATATTCGGGCAGATTCTTCAAAACTAAGTAGGAATGGTTTCCATGGTAAAGCCCATCGAAATTCAAATAGGATCACTGCTACTGGCACAAATAGGGAGAGAAATGTAAATAAGTCAAAAGATATAGTAACTAATGGTGTCCTGAATTCAGATGGGATGATACAGTTCTCAGGACCAGGAAAGGAGCAGAATCATACTATTAGTGTATCAACAGTTGCTAATTTTTCCAAACACGATGAAGGGAGCTTTCAGTCCATTAATATTGATGATGGTGGATGTGCTTTCTCCATGTTGAATAGAAATTTACCAATCTATATGAATTGCCCACACTGCAGGCTCTCTAAGAATAAGCAGGATCCTCCGAATACTAAGTTTTCGGGGACAGTATCACAGCTTCAACGGATTTTTATGGTTACACCTCCATTTCCAGTCATATTAGCTACTTGCCCAGTGATACAATTTGAGGCATCATGTCTACCTCCATCAATCCCAGAACGTGAGCAGGAGTTGCAGTTCAGCCTCGGATGCCAAGTGGTATTACCTCCAGAGAGTTTCCTTACTCTTAGACTCCCATTTGTGTATGGTGTAGAACTGGAGGATGGAAGTTTACATTCTCTAAACTGTTTTGAACATCAACCAGAGGTTACTGCCTGGATTACTAAAGGAACAGCATTACAGGTCATATCCAAAAGAAATAGTACTGGTCAAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1208

Amino Acids

131.2

Weight (kDa)

8.26

Isoelectric Point (pI)

47.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Smg8_Smg9 PF10220 44 - 192 4.7e-12 Smg8_Smg9
Smg8_Smg9 PF10220 552 - 690 1.9e-34 Smg8_Smg9
Smg8_Smg9 PF10220 1067 - 1167 1.1e-06 Smg8_Smg9
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2199
AasI GACNNNNNNGTC 1 cut(s) 137
Acc36I ACCTGC 1 cut(s) 2425
AccB7I CCANNNNNTGG 1 cut(s) 1795
AccI GTMKAC 3 cut(s) 1130, 2461, 3388
AccIII TCCGGA 1 cut(s) 2080
AciI CCGC 7 cut(s) 34, 46, 161, 289, 360, 2217, 2822
AcoI YGGCCR 2 cut(s) 2011, 2827
AcsI RAATTY 8 cut(s) 652, 990, 1072, 1461, 1485, 2974, 3058, 3214
AcuI CTGAAG 4 cut(s) 858, 894, 2139, 2910
AcyI GRCGYC 2 cut(s) 135, 249
AfaI GTAC 4 cut(s) 757, 2186, 2335, 3613
AfiI CCNNNNNNNGG 8 cut(s) 22, 668, 899, 1586, 1795, 1857, 2201, 2920
AflIII ACRYGT 2 cut(s) 213, 2695
AjnI CCWGG 6 cut(s) 258, 438, 661, 745, 3088, 3563
AloI GAACNNNNNNTCC 2 cut(s) 3410, 3442
Alw21I GWGCWC 5 cut(s) 170, 270, 423, 1850, 2612
Alw26I GTCTC 2 cut(s) 426, 1915
Alw44I GTGCAC 1 cut(s) 1846
AlwNI CAGNNNCTG 4 cut(s) 1031, 1346, 1406, 2516
Aor13HI TCCGGA 1 cut(s) 2080
AoxI GGCC 8 cut(s) 158, 180, 623, 881, 1168, 2011, 2135, 2827
ApaLI GTGCAC 1 cut(s) 1846
ApoI RAATTY 8 cut(s) 652, 990, 1072, 1461, 1485, 2974, 3058, 3214
ArsI GACNNNNNNTTYG 2 cut(s) 395, 427
AseI ATTAAT 1 cut(s) 3171
Asp700I GAANNNNTTC 2 cut(s) 1271, 2951
AsuC2I CCSGG 4 cut(s) 23, 233, 272, 391
AsuHPI GGTGA 2 cut(s) 63, 1157
AsuII TTCGAA 3 cut(s) 414, 647, 1598
AsuNHI GCTAGC 1 cut(s) 922
AvaII GGWCC 8 cut(s) 4, 37, 1689, 2731, 2760, 2770, 2871, 3086
BaeGI GKGCMC 3 cut(s) 872, 1850, 2822
BalI TGGCCA 1 cut(s) 2829
BamHI GGATCC 3 cut(s) 198, 1609, 3268
BanII GRGCYC 1 cut(s) 270
BarI GAAGNNNNNNTAC 2 cut(s) 3291, 3323
Bbv12I GWGCWC 5 cut(s) 170, 270, 423, 1850, 2612
BbvCI CCTCAGC 1 cut(s) 2546
BccI CCATC 8 cut(s) 604, 1862, 2838, 2976, 3059, 3176, 3403, 3506
BceAI ACGGC 5 cut(s) 148, 347, 638, 1361, 1998
BcgI CGANNNNNNTGC 6 cut(s) 627, 661, 2276, 2310, 2813, 2847
BciT130I CCWGG 6 cut(s) 260, 440, 663, 747, 3090, 3565
BcnI CCSGG 4 cut(s) 23, 233, 272, 391
BcoDI GTCTC 2 cut(s) 426, 1915
BfaI CTAG 7 cut(s) 816, 861, 923, 980, 1053, 1616, 2646
BfmI CTRYAG 6 cut(s) 968, 1371, 2319, 2418, 2517, 3244
BfuAI ACCTGC 1 cut(s) 2425
BglI GCCNNNNNGGC 1 cut(s) 2826
BmcAI AGTACT 1 cut(s) 3613
Bme18I GGWCC 8 cut(s) 4, 37, 1689, 2731, 2760, 2770, 2871, 3086
BmrI ACTGGG 2 cut(s) 755, 3356
BmtI GCTAGC 1 cut(s) 926
BmuI ACTGGG 2 cut(s) 755, 3356
BplI GAGNNNNNCTC 4 cut(s) 1835, 1867, 1934, 1966
BpmI CTGGAG 8 cut(s) 422, 509, 645, 1425, 1645, 1787, 3441, 3527
Bpu10I CCTNAGC 1 cut(s) 2546
Bpu14I TTCGAA 3 cut(s) 414, 647, 1598
BpuEI CTTGAG 2 cut(s) 1175, 2883
BpuMI CCSGG 4 cut(s) 23, 233, 272, 391
Bsa29I ATCGAT 1 cut(s) 2286
BsaBI GATNNNNATC 2 cut(s) 2029, 2706
BsaHI GRCGYC 2 cut(s) 135, 249
BsaI GGTCTC 1 cut(s) 426
BsaJI CCNNGG 7 cut(s) 244, 363, 439, 555, 1553, 2956, 3433
BsaWI WCCGGW 2 cut(s) 2080, 2767
Bsc4I CCNNNNNNNGG 8 cut(s) 22, 668, 899, 1586, 1795, 1857, 2201, 2920
Bse3DI GCAATG 2 cut(s) 697, 2310
Bse8I GATNNNNATC 2 cut(s) 2029, 2706
BseAI TCCGGA 1 cut(s) 2080
BseBI CCWGG 6 cut(s) 260, 440, 663, 747, 3090, 3565
BseCI ATCGAT 1 cut(s) 2286
BseDI CCNNGG 7 cut(s) 244, 363, 439, 555, 1553, 2956, 3433
BseJI GATNNNNATC 2 cut(s) 2029, 2706
BseLI CCNNNNNNNGG 8 cut(s) 22, 668, 899, 1586, 1795, 1857, 2201, 2920
BseMI GCAATG 2 cut(s) 697, 2310
BseMII CTCAG 9 cut(s) 126, 936, 1038, 1218, 1965, 2246, 2484, 2537, 3096
BseRI GAGGAG 7 cut(s) 91, 94, 97, 100, 278, 326, 2087
BseSI GKGCMC 3 cut(s) 872, 1850, 2822
BseYI CCCAGC 3 cut(s) 183, 809, 1046
BsgI GTGCAG 3 cut(s) 1062, 1835, 2387
BshFI GGCC 8 cut(s) 160, 182, 625, 883, 1170, 2013, 2137, 2829
BshVI ATCGAT 1 cut(s) 2286
BsiHKAI GWGCWC 5 cut(s) 170, 270, 423, 1850, 2612
BsiSI CCGG 6 cut(s) 23, 232, 271, 390, 2081, 2768
BslFI GGGAC 4 cut(s) 248, 287, 2717, 3307
BslI CCNNNNNNNGG 8 cut(s) 22, 668, 899, 1586, 1795, 1857, 2201, 2920
BsmAI GTCTC 2 cut(s) 426, 1915
BsmFI GGGAC 4 cut(s) 248, 287, 2717, 3307
BsmI GAATGC 1 cut(s) 1243
BsnI GGCC 8 cut(s) 160, 182, 625, 883, 1170, 2013, 2137, 2829
Bso31I GGTCTC 1 cut(s) 426
Bsp119I TTCGAA 3 cut(s) 414, 647, 1598
Bsp1286I GDGCHC 7 cut(s) 170, 270, 423, 872, 1850, 2612, 2822
Bsp13I TCCGGA 1 cut(s) 2080
Bsp19I CCATGG 1 cut(s) 2956
BspACI CCGC 7 cut(s) 34, 46, 161, 289, 360, 2217, 2822
BspANI GGCC 8 cut(s) 160, 182, 625, 883, 1170, 2013, 2137, 2829
BspCNI CTCAG 9 cut(s) 125, 937, 1037, 1217, 1964, 2245, 2485, 2538, 3095
BspDI ATCGAT 1 cut(s) 2286
BspEI TCCGGA 1 cut(s) 2080
BspMAI CTGCAG 6 cut(s) 972, 1375, 2323, 2422, 2521, 3248
BspMI ACCTGC 1 cut(s) 2425
BspOI GCTAGC 1 cut(s) 926
BspQI GCTCTTC 1 cut(s) 411
BspT104I TTCGAA 3 cut(s) 414, 647, 1598
BspTNI GGTCTC 1 cut(s) 426
BsrDI GCAATG 2 cut(s) 697, 2310
BssECI CCNNGG 7 cut(s) 244, 363, 439, 555, 1553, 2956, 3433
BssNAI GTATAC 1 cut(s) 1131
BssNI GRCGYC 2 cut(s) 135, 249
BssT1I CCWWGG 2 cut(s) 555, 2956
Bst1107I GTATAC 1 cut(s) 1131
Bst2UI CCWGG 6 cut(s) 260, 440, 663, 747, 3090, 3565
Bst6I CTCTTC 2 cut(s) 411, 649
BstACI GRCGYC 2 cut(s) 135, 249
BstAPI GCANNNNNTGC 2 cut(s) 1403, 3421
BstBI TTCGAA 3 cut(s) 414, 647, 1598
BstC8I GCNNGC 8 cut(s) 552, 924, 928, 1731, 1782, 2207, 2822, 3248
BstDSI CCRYGG 2 cut(s) 363, 2956
BstENI CCTNNNNNAGG 2 cut(s) 897, 2199
BstMAI GTCTC 2 cut(s) 426, 1915
BstNI CCWGG 6 cut(s) 260, 440, 663, 747, 3090, 3565
BstNSI RCATGY 6 cut(s) 554, 682, 1784, 1811, 2699, 2789
BstSFI CTRYAG 6 cut(s) 968, 1371, 2319, 2418, 2517, 3244
BstSLI GKGCMC 3 cut(s) 872, 1850, 2822
BstX2I RGATCY 3 cut(s) 198, 1609, 3268
BstXI CCANNNNNNTGG 2 cut(s) 1834, 2305
BstYI RGATCY 3 cut(s) 198, 1609, 3268
BstZ17I GTATAC 1 cut(s) 1131
Bsu15I ATCGAT 1 cut(s) 2286
BsuRI GGCC 8 cut(s) 160, 182, 625, 883, 1170, 2013, 2137, 2829
BsuTUI ATCGAT 1 cut(s) 2286
BtgI CCRYGG 2 cut(s) 363, 2956
BtsI GCAGTG 4 cut(s) 1818, 2292, 2988, 3241
BveI ACCTGC 1 cut(s) 2425
Cac8I GCNNGC 8 cut(s) 552, 924, 928, 1731, 1782, 2207, 2822, 3248
CaiI CAGNNNCTG 4 cut(s) 1031, 1346, 1406, 2516
ClaI ATCGAT 1 cut(s) 2286
CseI GACGC 3 cut(s) 124, 238, 1377
Csp6I GTAC 4 cut(s) 756, 2185, 2334, 3612
CviQI GTAC 4 cut(s) 756, 2185, 2334, 3612
DrdI GACNNNNNNGTC 1 cut(s) 137
DseDI GACNNNNNNGTC 1 cut(s) 137
EaeI YGGCCR 2 cut(s) 2011, 2827
Eam1104I CTCTTC 2 cut(s) 411, 649
EarI CTCTTC 2 cut(s) 411, 649
EciI GGCGGA 2 cut(s) 35, 349
Ecl136II GAGCTC 1 cut(s) 268
Eco130I CCWWGG 2 cut(s) 555, 2956
Eco24I GRGCYC 1 cut(s) 270
Eco31I GGTCTC 1 cut(s) 426
Eco47I GGWCC 8 cut(s) 4, 37, 1689, 2731, 2760, 2770, 2871, 3086
Eco53kI GAGCTC 1 cut(s) 268
Eco57I CTGAAG 4 cut(s) 858, 894, 2139, 2910
EcoICRI GAGCTC 1 cut(s) 268
EcoNI CCTNNNNNAGG 2 cut(s) 897, 2199
EcoO109I RGGNCCY 4 cut(s) 37, 1689, 2135, 2871
EcoRI GAATTC 1 cut(s) 3058
EcoRII CCWGG 6 cut(s) 258, 438, 661, 745, 3088, 3563
EcoT14I CCWWGG 2 cut(s) 555, 2956
EcoT22I ATGCAT 1 cut(s) 1102
EcoT38I GRGCYC 1 cut(s) 270
ErhI CCWWGG 2 cut(s) 555, 2956
FalI AAGNNNNNCTT 4 cut(s) 539, 571, 2193, 2225
FaqI GGGAC 4 cut(s) 248, 287, 2717, 3307
FauI CCCGC 3 cut(s) 27, 2210, 2829
FblI GTMKAC 3 cut(s) 1130, 2461, 3388
FriOI GRGCYC 1 cut(s) 270
FspBI CTAG 7 cut(s) 816, 861, 923, 980, 1053, 1616, 2646
GsaI CCCAGC 3 cut(s) 187, 813, 1050
GsuI CTGGAG 8 cut(s) 422, 509, 645, 1425, 1645, 1787, 3441, 3527
HaeIII GGCC 8 cut(s) 160, 182, 625, 883, 1170, 2013, 2137, 2829
HapII CCGG 6 cut(s) 23, 232, 271, 390, 2081, 2768
HgaI GACGC 3 cut(s) 124, 238, 1377
Hin1I GRCGYC 2 cut(s) 135, 249
HincII GTYRAC 2 cut(s) 684, 1481
HindII GTYRAC 2 cut(s) 684, 1481
HindIII AAGCTT 1 cut(s) 2345
HpaII CCGG 6 cut(s) 23, 232, 271, 390, 2081, 2768
HphI GGTGA 2 cut(s) 63, 1157
Hpy99I CGWCG 5 cut(s) 134, 140, 143, 254, 1382
HpyCH4IV ACGT 3 cut(s) 213, 1418, 3409
HpySE526I ACGT 3 cut(s) 213, 1418, 3409
Hsp92I GRCGYC 2 cut(s) 135, 249
Kpn2I TCCGGA 1 cut(s) 2080
LguI GCTCTTC 1 cut(s) 411
MaeI CTAG 7 cut(s) 816, 861, 923, 980, 1053, 1616, 2646
MaeII ACGT 3 cut(s) 213, 1418, 3409
MflI RGATCY 3 cut(s) 198, 1609, 3268
MhlI GDGCHC 7 cut(s) 170, 270, 423, 872, 1850, 2612, 2822
MlsI TGGCCA 1 cut(s) 2829
MluNI TGGCCA 1 cut(s) 2829
MlyI GAGTC 7 cut(s) 200, 398, 679, 821, 1157, 1952, 3474
MmeI TCCRAC 4 cut(s) 234, 1475, 1617, 1815
Mox20I TGGCCA 1 cut(s) 2829
Mph1103I ATGCAT 1 cut(s) 1102
MroI TCCGGA 1 cut(s) 2080
MroXI GAANNNNTTC 2 cut(s) 1271, 2951
MscI TGGCCA 1 cut(s) 2829
MslI CAYNNNNRTG 1 cut(s) 1977
Msp20I TGGCCA 1 cut(s) 2829
MspA1I CMGCKG 5 cut(s) 1343, 1403, 1700, 2516, 2545
MspI CCGG 6 cut(s) 23, 232, 271, 390, 2081, 2768
Mva1269I GAATGC 1 cut(s) 1243
MvaI CCWGG 6 cut(s) 260, 440, 663, 747, 3090, 3565
NciI CCSGG 4 cut(s) 23, 233, 272, 391
NcoI CCATGG 1 cut(s) 2956
NheI GCTAGC 1 cut(s) 922
NmeAIII GCCGAG 4 cut(s) 158, 189, 225, 809
NmuCI GTSAC 3 cut(s) 763, 1944, 2087
NsiI ATGCAT 1 cut(s) 1102
NspI RCATGY 6 cut(s) 554, 682, 1784, 1811, 2699, 2789
NspV TTCGAA 3 cut(s) 414, 647, 1598
PacI TTAATTAA 1 cut(s) 1005
PaeI GCATGC 2 cut(s) 554, 1784
PciI ACATGT 1 cut(s) 2695
PciSI GCTCTTC 1 cut(s) 411
PcsI WCGNNNNNNNCGW 4 cut(s) 138, 210, 420, 2026
PctI GAATGC 1 cut(s) 1243
PdmI GAANNNNTTC 2 cut(s) 1271, 2951
PflFI GACNNNGTC 1 cut(s) 134
PflMI CCANNNNNTGG 1 cut(s) 1795
PfoI TCCNGGA 2 cut(s) 270, 745
PleI GAGTC 7 cut(s) 200, 398, 679, 821, 1156, 1951, 3474
PpsI GAGTC 7 cut(s) 200, 398, 679, 821, 1156, 1951, 3474
PpuMI RGGWCCY 3 cut(s) 37, 1689, 2871
PscI ACATGT 1 cut(s) 2695
PshBI ATTAAT 1 cut(s) 3171
PsiI TTATAA 1 cut(s) 2199
Psp124BI GAGCTC 1 cut(s) 270
Psp5II RGGWCCY 3 cut(s) 37, 1689, 2871
Psp6I CCWGG 6 cut(s) 258, 438, 661, 745, 3088, 3563
PspFI CCCAGC 3 cut(s) 183, 809, 1046
PspGI CCWGG 6 cut(s) 258, 438, 661, 745, 3088, 3563
PspPPI RGGWCCY 3 cut(s) 37, 1689, 2871
PstI CTGCAG 6 cut(s) 972, 1375, 2323, 2422, 2521, 3248
PstNI CAGNNNCTG 4 cut(s) 1031, 1346, 1406, 2516
PsuI RGATCY 3 cut(s) 198, 1609, 3268
PsyI GACNNNGTC 1 cut(s) 134
PvuII CAGCTG 5 cut(s) 1343, 1403, 1700, 2516, 2545
RsaI GTAC 4 cut(s) 757, 2186, 2335, 3613
RsaNI GTAC 4 cut(s) 756, 2185, 2334, 3612
RseI CAYNNNNRTG 1 cut(s) 1977
SacI GAGCTC 1 cut(s) 270
SapI GCTCTTC 1 cut(s) 411
ScaI AGTACT 1 cut(s) 3613
SchI GAGTC 7 cut(s) 200, 398, 679, 821, 1157, 1952, 3474
SduI GDGCHC 7 cut(s) 170, 270, 423, 872, 1850, 2612, 2822
SfcI CTRYAG 6 cut(s) 968, 1371, 2319, 2418, 2517, 3244
SfuI TTCGAA 3 cut(s) 414, 647, 1598
SinI GGWCC 8 cut(s) 4, 37, 1689, 2731, 2760, 2770, 2871, 3086
SmiMI CAYNNNNRTG 1 cut(s) 1977
SmlI CTYRAG 2 cut(s) 1154, 2898
SmoI CTYRAG 2 cut(s) 1154, 2898
SphI GCATGC 2 cut(s) 554, 1784
SsiI CCGC 7 cut(s) 34, 46, 161, 289, 360, 2217, 2822
SspI AATATT 1 cut(s) 3175
SspMI CTAG 7 cut(s) 816, 861, 923, 980, 1053, 1616, 2646
SstI GAGCTC 1 cut(s) 270
StyI CCWWGG 2 cut(s) 555, 2956
TaiI ACGT 3 cut(s) 216, 1421, 3412
TatI WGTACW 1 cut(s) 3611
TauI GCSGC 1 cut(s) 163
TseFI GTSAC 3 cut(s) 763, 1944, 2087
Tsp45I GTSAC 3 cut(s) 763, 1944, 2087
TspGWI ACGGA 2 cut(s) 2035, 3328
Tth111I GACNNNGTC 1 cut(s) 134
Van91I CCANNNNNTGG 1 cut(s) 1795
VneI GTGCAC 1 cut(s) 1846
VpaK11BI GGWCC 8 cut(s) 4, 37, 1689, 2731, 2760, 2770, 2871, 3086
VspI ATTAAT 1 cut(s) 3171
XagI CCTNNNNNAGG 2 cut(s) 897, 2199
XapI RAATTY 8 cut(s) 652, 990, 1072, 1461, 1485, 2974, 3058, 3214
XbaI TCTAGA 2 cut(s) 1052, 2645
XceI RCATGY 6 cut(s) 554, 682, 1784, 1811, 2699, 2789
XcmI CCANNNNNNNNNTGG 2 cut(s) 553, 817
XmiI GTMKAC 3 cut(s) 1130, 2461, 3388
XmnI GAANNNNTTC 2 cut(s) 1271, 2951
XspI CTAG 7 cut(s) 816, 861, 923, 980, 1053, 1616, 2646
ZrmI AGTACT 1 cut(s) 3613
Zsp2I ATGCAT 1 cut(s) 1102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.