Rw5G035080

Smg8_Smg9

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
60568397 .. 60573655
5259 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G035080.1

Sequence Viewer

Length: 3609 bp
ATGGACCCACCCAACCACCCGAACCCGAACCCGGCATCTATGCGGGTCCTAATCCGCCCACCCCCTTCTTCCTATTCTTCACCTCCTTCCCAAACCATTCCGATTCCCTCCTCCTCCTCAGACCCTCCCTCCACCGACGGCGTCGTCGTGGTGGGCTTCATTGGGCCGCCGAGCACCGACCACTCGGCCCAGCTCATCAATCGGATCCTCGACTCCAACGTGTTCGGGTCGGGCAACCGGGACAAAAGCCTCGGCGTCGAGAACCAGGAGCAGCTCCGGGACTGGTTGAAGTGGCGGAGAATTAGTTACTACCATGAGGAGCAGAAGGGGATTCTGTTCTTGCAGTTTTGCTCCACGCTCTGCTCCGCCGTGGACGATAACGGGTTATCGGACTCCGGGTCGGGTTTCGACTCTGTGTTCGAAGAGCACGACTTTGGAGACCTCCAGGGGATGCTTTTCATGTTCTCTGTTTGCCATGTAATTATATATATTCTGGAGGGTTCACGGTTTGATACTCAACTCCTGAAAAAGTTTCGAGTGTTACAAGCTGCCAAGCATGCCTTGGCTCCATTAGTCAGACCCCGAAATATGCAGCCAACACCATCCAAGCCCTATTCGTCATCCTCAAGGCCTACCACATCTGCAACCTCTTCGAAAAATTCTTCTCCAGGTAGAGGTGGTGGCATGTTGACTCGCAATGCTTCTGCCATTTCGCTAATGTCAGGTTTAGGTTCCTACACTTCTTTGTTTCCTGGACAGTGTACCCCAGTCACACTGTTTGTTTTCATTGATGATTTCTCTGATGTGCCAAATCCCAGCTCTAGTGTGGAGGACTCGGCAGATACATCCTCACTAAATCAGCCTTCTAGTTTGGGCACTTCAGCAAGGCCAAGTTTGCCTATTAAAGGTTCTGCTTCAGTGGTTGTGCTAGCACGCCCTGTGAGTAAATCTGAGGGTAGTTTTAGGAAGAAGCTGCAGTCATCCCTAGAAGCACAAATTCGTTTCTTAATTAAGAAGTGTAGAACACTCTCAGGTTCTGAAACTGGTCATGCTGGGTCTAGAAATGGCGGTGCTTCAAATTCTGCACCTCTGTTTTCACTTGATGCATCAAGGGCTGTTCTGTTGTTAGATAGGTATACAAATCAGAGAGGTGAGTCGCTTGAGTTTGCTACTGGCCTTGTTGAAGATGTTTTGAATGGGAAGGCAACCTCAGATTCTCTTTTGCTTGAAAGTCATGGTCAGAATGCAAGTAAAGAGGATATAATATCAGTGAAGGAGTTCATTTACAGGCAATCAGATATTCTAAGAGGGAGGGGGGGAGTTGTAACCAATTCCAATAGTGGTTCAGCTGCTGGTGTAGGTATGGCTGCTGTTGCTGCAGCCGTCGCTGCTGCGTCAGCAGCATCAGCTGCTGCATCAACTACGTCTGGAAAGACATTTAATGCTCCAGAACTTCCAACTCTCCAAATTTGGTTATCTTCCAGTCAACAAGTTCTTCATGGGGTTCTTTCAGCAAAAGGTGGCTGCATAGATGAAACTGAAATTAGTAAAAGAAAACCTCGGACGAGGAACACTATTCCACAGCCAGTTGAAGGAGTTTCTTCGAAAGGTATGGATCCCCTAGATTTAGCAGTATCTTGGTTGGAAAGTGGTAATAAAATGAACTCCAGATTTTCGACTTTGTGGTGTGAAAGGACCCTTCCAGCTGCCAAAGAGGTTTATCTGAAAGACTTGCCTGCTTGTTACCCAACTTCACAACATGAAGCTCATCTGGAGAAGGCTTTGCATGCTTTCCACTCAATGGTAAAAGGACATGCAGTGCAGCATTTTGCCAAAAAGTTGGAGGACGAGTGCACCTCCATCTGGAAATCTGGAAGGCAACTGTGTGATGCTGTTAGTTTGACTGGAAAACCATGTATGCACCAGAGACATAATGTTGATACTAATGAGTCACTCTCAGGAGCTACTGTGAAGCAACATTCCAGTGGATATGTTTTCCTTCATGCCTGTTCTTGTGGCCGTTCACGGAGATTACGATCTGATCCTTTTGACTTTGAATCAGCGAACATTACTTTTAGTTGCTTTCCGGACTGTGACAAGCTCCTCCCTACACTTCAATTACCTGAAGTAAGTAGTTCAGGGCCTATTCAATCTTCCTCAAAGTTTCTTATGAAATGGACAATATCTATGGAGATACAGAATAGAGCAATCGATTTCACTGCCAAAGCAATGGATCAAGGTTCTGCAGTTCAGTCAGGTACGAACTTTAAGCTTGAATCTAAAGCTGATGTGCGGTTGCACTCGAAGGAGTTACAATCCAGAGTTGAAAGCCATAGAAAACATGCAGAGGACATAGTATCTGATGATAATAAAATCAGTTTTGGTAAAGGTCTACCCAACTTTACCATGAGGAAACCTTTTTCTGAGGTTGTTGCTGGAACAGCAGCTGCAGATTCAGGATTTCCTCCTATCCAGCTGAGGAAAAAATCTGCATCCAGTTTAGATAAGAGTTTCAAGCAAATTAGGTCAAGGGATCAGAGTACAGAGCAGAATAGTGATAAAGGAACTCAAAAATCCAGAGATGATTTACCTGTTCAAGAAACAGTGAGTGGGATCAGTAGCACACATGTTGATCCTTATCTACGAATAGGTAGTAATGTGGTCCCTATGAACCTGAATGGCGTTGAGAGGTCCAAACCAGACCCTTCTTTTAAGCATGTAACAGTGTATGTTGGGTTTGAGCATGAGTGCCCGCATGGCCATCGTTTTCTATTAAATCCAGAGAATCTTAATGAGCTTGGGTCCTCATATCAGTTGCCTGAAGAATCTCAAGTGAAATCAGACCATATTCAGGCAGATTCTTCAAAACTAAGTAGGAATGGTTTCCATGGTAAAGCCCATCGAAATTCAAATAGGATCACTACTACCGGCACAAATAGGGAGAGAAATGTAAATAAGTCAAAAGATATAGTAACTAATGGTGTCCTGAATTCAGATGGGATGATACAGTTCTCAGGACCAGGAAAGGAGCAGAATCATACTATTAGTGTATCAACAGTTGCTAATTTTTCCAAACACGATGAAGGGAGCTTTCAGTCCATTAATATTGATGATGGTGGATGTGCTTTCTCCATGTTGAATAGAAATTTACCAATCTATATGAATTGCCCACACTGCAGGCTCTCTAAGAATAAGCAGGATCCTCCGAATACTAAGTTTTCGGGGACAGTATCACAGCTTCAACGGATTTTTATGGTTACACCTCCATTTCCAGTCATATTAGCTACTTGCCCAGTGATACAATTTGAGGCATCATGTCTACCTCCATCAATCCCAGAACGTGAGCAGGAGTTGCGGTTCAGCCTCGGATGCCAAGTATCAATCCCAGAACGTGAGCAGGAGTTGCGGTTCAGCCTCGGATGCCAAGTGGTATTACCTCCAGAGAGTTTCCTTACTCTTAGACTCCCATTTGTGTATGGTGTAGAACTGGAGGATGGAAGTTTACATTCTCTAAACTGTTTTGAACATCAACCAGAGGTTACTGCCTGGATTACCAAAGGAACAGCATTACAGGTCATATCCAAAAGAAATAGTACTGGTCAAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1202

Amino Acids

130.89

Weight (kDa)

8.18

Isoelectric Point (pI)

46.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Smg8_Smg9 PF10220 46 - 194 1.7e-13 Smg8_Smg9
Smg8_Smg9 PF10220 553 - 696 3.2e-35 Smg8_Smg9
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 143
AccB7I CCANNNNNTGG 1 cut(s) 1801
AccI GTMKAC 3 cut(s) 1136, 2392, 3319
AccIII TCCGGA 1 cut(s) 2086
AcoI YGGCCR 2 cut(s) 2017, 2758
AcsI RAATTY 7 cut(s) 658, 996, 1078, 1467, 2905, 2989, 3145
AcuI CTGAAG 4 cut(s) 864, 900, 2145, 2841
AcyI GRCGYC 2 cut(s) 141, 255
AfaI GTAC 4 cut(s) 763, 2260, 2542, 3595
AfiI CCNNNNNNNGG 7 cut(s) 31, 674, 905, 1592, 1801, 1863, 2851
AflIII ACRYGT 2 cut(s) 219, 2626
AhdI GACNNNNNGTC 1 cut(s) 397
AjnI CCWGG 6 cut(s) 264, 444, 667, 751, 3019, 3545
AloI GAACNNNNNNTCC 4 cut(s) 3341, 3373, 3392, 3424
Alw21I GWGCWC 3 cut(s) 176, 429, 1856
Alw26I GTCTC 2 cut(s) 432, 1921
Alw44I GTGCAC 1 cut(s) 1852
AlwNI CAGNNNCTG 4 cut(s) 1037, 1352, 1412, 2447
Aor13HI TCCGGA 1 cut(s) 2086
AoxI GGCC 8 cut(s) 164, 186, 629, 887, 1174, 2017, 2141, 2758
ApaLI GTGCAC 1 cut(s) 1852
ApoI RAATTY 7 cut(s) 658, 996, 1078, 1467, 2905, 2989, 3145
ArsI GACNNNNNNTTYG 2 cut(s) 401, 433
AseI ATTAAT 1 cut(s) 3102
Asp700I GAANNNNTTC 2 cut(s) 1277, 2882
AsuC2I CCSGG 4 cut(s) 32, 239, 278, 397
AsuHPI GGTGA 2 cut(s) 72, 1163
AsuII TTCGAA 3 cut(s) 420, 653, 1604
AsuNHI GCTAGC 1 cut(s) 928
AvaII GGWCC 7 cut(s) 4, 46, 1695, 2662, 2691, 2802, 3017
BaeGI GKGCMC 3 cut(s) 878, 1856, 2753
BalI TGGCCA 1 cut(s) 2760
BamHI GGATCC 3 cut(s) 204, 1615, 3199
BarI GAAGNNNNNNTAC 2 cut(s) 3222, 3254
Bbv12I GWGCWC 3 cut(s) 176, 429, 1856
BbvCI CCTCAGC 1 cut(s) 2477
BccI CCATC 8 cut(s) 610, 1868, 2769, 2907, 2990, 3107, 3334, 3488
BceAI ACGGC 4 cut(s) 154, 353, 1367, 2004
BcgI CGANNNNNNTGC 6 cut(s) 633, 667, 2201, 2235, 2744, 2778
BciT130I CCWGG 6 cut(s) 266, 446, 669, 753, 3021, 3547
BcnI CCSGG 4 cut(s) 32, 239, 278, 397
BcoDI GTCTC 2 cut(s) 432, 1921
BfaI CTAG 6 cut(s) 822, 867, 929, 986, 1059, 1622
BfmI CTRYAG 5 cut(s) 974, 1377, 2244, 2448, 3175
BglI GCCNNNNNGGC 1 cut(s) 2757
BmcAI AGTACT 1 cut(s) 3595
Bme18I GGWCC 7 cut(s) 4, 46, 1695, 2662, 2691, 2802, 3017
BmeRI GACNNNNNGTC 1 cut(s) 397
BmrI ACTGGG 2 cut(s) 761, 3287
BmtI GCTAGC 1 cut(s) 932
BmuI ACTGGG 2 cut(s) 761, 3287
BplI GAGNNNNNCTC 4 cut(s) 1841, 1873, 1940, 1972
BpmI CTGGAG 8 cut(s) 428, 515, 651, 1431, 1651, 1793, 3423, 3509
Bpu10I CCTNAGC 1 cut(s) 2477
Bpu14I TTCGAA 3 cut(s) 420, 653, 1604
BpuEI CTTGAG 3 cut(s) 610, 1181, 2814
BpuMI CCSGG 4 cut(s) 32, 239, 278, 397
Bsa29I ATCGAT 1 cut(s) 2211
BsaBI GATNNNNATC 2 cut(s) 2035, 2637
BsaHI GRCGYC 2 cut(s) 141, 255
BsaI GGTCTC 1 cut(s) 432
BsaJI CCNNGG 8 cut(s) 250, 369, 445, 561, 1559, 2887, 3364, 3415
BsaWI WCCGGW 1 cut(s) 2086
Bsc4I CCNNNNNNNGG 7 cut(s) 31, 674, 905, 1592, 1801, 1863, 2851
Bse118I RCCGGY 1 cut(s) 2927
Bse3DI GCAATG 2 cut(s) 703, 2235
Bse8I GATNNNNATC 2 cut(s) 2035, 2637
BseAI TCCGGA 1 cut(s) 2086
BseBI CCWGG 6 cut(s) 266, 446, 669, 753, 3021, 3547
BseCI ATCGAT 1 cut(s) 2211
BseDI CCNNGG 8 cut(s) 250, 369, 445, 561, 1559, 2887, 3364, 3415
BseJI GATNNNNATC 2 cut(s) 2035, 2637
BseLI CCNNNNNNNGG 7 cut(s) 31, 674, 905, 1592, 1801, 1863, 2851
BseMI GCAATG 2 cut(s) 703, 2235
BseMII CTCAG 8 cut(s) 132, 942, 1044, 1224, 1971, 2415, 2468, 3027
BseRI GAGGAG 5 cut(s) 100, 103, 106, 332, 2093
BseSI GKGCMC 3 cut(s) 878, 1856, 2753
BseYI CCCAGC 3 cut(s) 189, 815, 1052
BsgI GTGCAG 2 cut(s) 1068, 1841
BshFI GGCC 8 cut(s) 166, 188, 631, 889, 1176, 2019, 2143, 2760
BshVI ATCGAT 1 cut(s) 2211
BsiHKAI GWGCWC 3 cut(s) 176, 429, 1856
BsiSI CCGG 6 cut(s) 32, 238, 277, 396, 2087, 2928
BslFI GGGAC 4 cut(s) 254, 293, 2648, 3238
BslI CCNNNNNNNGG 7 cut(s) 31, 674, 905, 1592, 1801, 1863, 2851
BsmAI GTCTC 2 cut(s) 432, 1921
BsmFI GGGAC 4 cut(s) 254, 293, 2648, 3238
BsmI GAATGC 1 cut(s) 1249
BsnI GGCC 8 cut(s) 166, 188, 631, 889, 1176, 2019, 2143, 2760
Bso31I GGTCTC 1 cut(s) 432
Bsp119I TTCGAA 3 cut(s) 420, 653, 1604
Bsp1286I GDGCHC 5 cut(s) 176, 429, 878, 1856, 2753
Bsp13I TCCGGA 1 cut(s) 2086
Bsp19I CCATGG 1 cut(s) 2887
BspANI GGCC 8 cut(s) 166, 188, 631, 889, 1176, 2019, 2143, 2760
BspCNI CTCAG 8 cut(s) 131, 943, 1043, 1223, 1970, 2416, 2469, 3026
BspDI ATCGAT 1 cut(s) 2211
BspEI TCCGGA 1 cut(s) 2086
BspMAI CTGCAG 5 cut(s) 978, 1381, 2248, 2452, 3179
BspOI GCTAGC 1 cut(s) 932
BspQI GCTCTTC 1 cut(s) 417
BspT104I TTCGAA 3 cut(s) 420, 653, 1604
BspTNI GGTCTC 1 cut(s) 432
BsrDI GCAATG 2 cut(s) 703, 2235
BsrFI RCCGGY 1 cut(s) 2927
BssAI RCCGGY 1 cut(s) 2927
BssECI CCNNGG 8 cut(s) 250, 369, 445, 561, 1559, 2887, 3364, 3415
BssNAI GTATAC 1 cut(s) 1137
BssNI GRCGYC 2 cut(s) 141, 255
BssT1I CCWWGG 2 cut(s) 561, 2887
Bst1107I GTATAC 1 cut(s) 1137
Bst2UI CCWGG 6 cut(s) 266, 446, 669, 753, 3021, 3547
Bst6I CTCTTC 2 cut(s) 417, 655
BstACI GRCGYC 2 cut(s) 141, 255
BstAPI GCANNNNNTGC 3 cut(s) 1409, 3352, 3403
BstBI TTCGAA 3 cut(s) 420, 653, 1604
BstC8I GCNNGC 7 cut(s) 558, 930, 934, 1737, 1788, 2753, 3179
BstDSI CCRYGG 2 cut(s) 369, 2887
BstENI CCTNNNNNAGG 1 cut(s) 903
BstMAI GTCTC 2 cut(s) 432, 1921
BstNI CCWGG 6 cut(s) 266, 446, 669, 753, 3021, 3547
BstNSI RCATGY 7 cut(s) 560, 688, 1790, 1817, 2345, 2630, 2720
BstSFI CTRYAG 5 cut(s) 974, 1377, 2244, 2448, 3175
BstSLI GKGCMC 3 cut(s) 878, 1856, 2753
BstX2I RGATCY 3 cut(s) 204, 1615, 3199
BstXI CCANNNNNNTGG 2 cut(s) 1840, 2230
BstYI RGATCY 3 cut(s) 204, 1615, 3199
BstZ17I GTATAC 1 cut(s) 1137
Bsu15I ATCGAT 1 cut(s) 2211
BsuRI GGCC 8 cut(s) 166, 188, 631, 889, 1176, 2019, 2143, 2760
BsuTUI ATCGAT 1 cut(s) 2211
BtgI CCRYGG 2 cut(s) 369, 2887
BtsI GCAGTG 3 cut(s) 1824, 2217, 3172
Cac8I GCNNGC 7 cut(s) 558, 930, 934, 1737, 1788, 2753, 3179
CaiI CAGNNNCTG 4 cut(s) 1037, 1352, 1412, 2447
Cfr10I RCCGGY 1 cut(s) 2927
ClaI ATCGAT 1 cut(s) 2211
CseI GACGC 3 cut(s) 130, 244, 1383
Csp6I GTAC 4 cut(s) 762, 2259, 2541, 3594
CviQI GTAC 4 cut(s) 762, 2259, 2541, 3594
DrdI GACNNNNNNGTC 1 cut(s) 143
DriI GACNNNNNGTC 1 cut(s) 397
DseDI GACNNNNNNGTC 1 cut(s) 143
EaeI YGGCCR 2 cut(s) 2017, 2758
Eam1104I CTCTTC 2 cut(s) 417, 655
Eam1105I GACNNNNNGTC 1 cut(s) 397
EarI CTCTTC 2 cut(s) 417, 655
EciI GGCGGA 3 cut(s) 44, 310, 355
Eco130I CCWWGG 2 cut(s) 561, 2887
Eco147I AGGCCT 1 cut(s) 631
Eco31I GGTCTC 1 cut(s) 432
Eco47I GGWCC 7 cut(s) 4, 46, 1695, 2662, 2691, 2802, 3017
Eco57I CTGAAG 4 cut(s) 864, 900, 2145, 2841
EcoNI CCTNNNNNAGG 1 cut(s) 903
EcoO109I RGGNCCY 4 cut(s) 46, 1695, 2141, 2802
EcoRI GAATTC 1 cut(s) 2989
EcoRII CCWGG 6 cut(s) 264, 444, 667, 751, 3019, 3545
EcoT14I CCWWGG 2 cut(s) 561, 2887
EcoT22I ATGCAT 1 cut(s) 1108
ErhI CCWWGG 2 cut(s) 561, 2887
FalI AAGNNNNNCTT 2 cut(s) 545, 577
FaqI GGGAC 4 cut(s) 254, 293, 2648, 3238
FauI CCCGC 2 cut(s) 36, 2760
FblI GTMKAC 3 cut(s) 1136, 2392, 3319
FspBI CTAG 6 cut(s) 822, 867, 929, 986, 1059, 1622
GsaI CCCAGC 3 cut(s) 193, 819, 1056
GsuI CTGGAG 8 cut(s) 428, 515, 651, 1431, 1651, 1793, 3423, 3509
HaeIII GGCC 8 cut(s) 166, 188, 631, 889, 1176, 2019, 2143, 2760
HapII CCGG 6 cut(s) 32, 238, 277, 396, 2087, 2928
HgaI GACGC 3 cut(s) 130, 244, 1383
Hin1I GRCGYC 2 cut(s) 141, 255
HincII GTYRAC 2 cut(s) 690, 1487
HindII GTYRAC 2 cut(s) 690, 1487
HindIII AAGCTT 1 cut(s) 2270
HpaII CCGG 6 cut(s) 32, 238, 277, 396, 2087, 2928
HphI GGTGA 2 cut(s) 72, 1163
Hpy99I CGWCG 5 cut(s) 140, 146, 149, 260, 1388
HpyCH4IV ACGT 4 cut(s) 219, 1424, 3340, 3391
HpySE526I ACGT 4 cut(s) 219, 1424, 3340, 3391
Hsp92I GRCGYC 2 cut(s) 141, 255
Kpn2I TCCGGA 1 cut(s) 2086
LguI GCTCTTC 1 cut(s) 417
MaeI CTAG 6 cut(s) 822, 867, 929, 986, 1059, 1622
MaeII ACGT 4 cut(s) 219, 1424, 3340, 3391
MflI RGATCY 3 cut(s) 204, 1615, 3199
MhlI GDGCHC 5 cut(s) 176, 429, 878, 1856, 2753
MlsI TGGCCA 1 cut(s) 2760
MluNI TGGCCA 1 cut(s) 2760
MlyI GAGTC 8 cut(s) 206, 386, 404, 685, 827, 1163, 1958, 3456
MmeI TCCRAC 4 cut(s) 240, 1481, 1623, 1821
Mox20I TGGCCA 1 cut(s) 2760
Mph1103I ATGCAT 1 cut(s) 1108
MroI TCCGGA 1 cut(s) 2086
MroXI GAANNNNTTC 2 cut(s) 1277, 2882
MscI TGGCCA 1 cut(s) 2760
MslI CAYNNNNRTG 1 cut(s) 1983
Msp20I TGGCCA 1 cut(s) 2760
MspA1I CMGCKG 5 cut(s) 1349, 1409, 1706, 2447, 2476
MspI CCGG 6 cut(s) 32, 238, 277, 396, 2087, 2928
Mva1269I GAATGC 1 cut(s) 1249
MvaI CCWGG 6 cut(s) 266, 446, 669, 753, 3021, 3547
NciI CCSGG 4 cut(s) 32, 239, 278, 397
NcoI CCATGG 1 cut(s) 2887
NheI GCTAGC 1 cut(s) 928
NmeAIII GCCGAG 4 cut(s) 164, 195, 231, 815
NmuCI GTSAC 3 cut(s) 769, 1950, 2093
NsiI ATGCAT 1 cut(s) 1108
NspI RCATGY 7 cut(s) 560, 688, 1790, 1817, 2345, 2630, 2720
NspV TTCGAA 3 cut(s) 420, 653, 1604
PacI TTAATTAA 1 cut(s) 1011
PaeI GCATGC 2 cut(s) 560, 1790
PceI AGGCCT 1 cut(s) 631
PciI ACATGT 1 cut(s) 2626
PciSI GCTCTTC 1 cut(s) 417
PcsI WCGNNNNNNNCGW 4 cut(s) 144, 216, 426, 2032
PctI GAATGC 1 cut(s) 1249
PdmI GAANNNNTTC 2 cut(s) 1277, 2882
PflFI GACNNNGTC 1 cut(s) 140
PflMI CCANNNNNTGG 1 cut(s) 1801
PfoI TCCNGGA 2 cut(s) 276, 751
PleI GAGTC 8 cut(s) 206, 386, 404, 685, 827, 1162, 1957, 3456
PpsI GAGTC 8 cut(s) 206, 386, 404, 685, 827, 1162, 1957, 3456
PpuMI RGGWCCY 3 cut(s) 46, 1695, 2802
PscI ACATGT 1 cut(s) 2626
PshBI ATTAAT 1 cut(s) 3102
Psp5II RGGWCCY 3 cut(s) 46, 1695, 2802
Psp6I CCWGG 6 cut(s) 264, 444, 667, 751, 3019, 3545
PspFI CCCAGC 3 cut(s) 189, 815, 1052
PspGI CCWGG 6 cut(s) 264, 444, 667, 751, 3019, 3545
PspPPI RGGWCCY 3 cut(s) 46, 1695, 2802
PstI CTGCAG 5 cut(s) 978, 1381, 2248, 2452, 3179
PstNI CAGNNNCTG 4 cut(s) 1037, 1352, 1412, 2447
PsuI RGATCY 3 cut(s) 204, 1615, 3199
PsyI GACNNNGTC 1 cut(s) 140
PvuII CAGCTG 5 cut(s) 1349, 1409, 1706, 2447, 2476
RsaI GTAC 4 cut(s) 763, 2260, 2542, 3595
RsaNI GTAC 4 cut(s) 762, 2259, 2541, 3594
RseI CAYNNNNRTG 1 cut(s) 1983
SapI GCTCTTC 1 cut(s) 417
ScaI AGTACT 1 cut(s) 3595
SchI GAGTC 8 cut(s) 206, 386, 404, 685, 827, 1163, 1958, 3456
SduI GDGCHC 5 cut(s) 176, 429, 878, 1856, 2753
SfcI CTRYAG 5 cut(s) 974, 1377, 2244, 2448, 3175
SfuI TTCGAA 3 cut(s) 420, 653, 1604
SinI GGWCC 7 cut(s) 4, 46, 1695, 2662, 2691, 2802, 3017
SmiMI CAYNNNNRTG 1 cut(s) 1983
SmlI CTYRAG 3 cut(s) 625, 1160, 2829
SmoI CTYRAG 3 cut(s) 625, 1160, 2829
SphI GCATGC 2 cut(s) 560, 1790
SseBI AGGCCT 1 cut(s) 631
SspI AATATT 1 cut(s) 3106
SspMI CTAG 6 cut(s) 822, 867, 929, 986, 1059, 1622
StuI AGGCCT 1 cut(s) 631
StyI CCWWGG 2 cut(s) 561, 2887
TaiI ACGT 4 cut(s) 222, 1427, 3343, 3394
TatI WGTACW 2 cut(s) 2540, 3593
TauI GCSGC 1 cut(s) 169
TseFI GTSAC 3 cut(s) 769, 1950, 2093
Tsp45I GTSAC 3 cut(s) 769, 1950, 2093
TspGWI ACGGA 2 cut(s) 2041, 3259
Tth111I GACNNNGTC 1 cut(s) 140
Van91I CCANNNNNTGG 1 cut(s) 1801
VneI GTGCAC 1 cut(s) 1852
VpaK11BI GGWCC 7 cut(s) 4, 46, 1695, 2662, 2691, 2802, 3017
VspI ATTAAT 1 cut(s) 3102
XagI CCTNNNNNAGG 1 cut(s) 903
XapI RAATTY 7 cut(s) 658, 996, 1078, 1467, 2905, 2989, 3145
XbaI TCTAGA 1 cut(s) 1058
XceI RCATGY 7 cut(s) 560, 688, 1790, 1817, 2345, 2630, 2720
XcmI CCANNNNNNNNNTGG 2 cut(s) 559, 823
XmiI GTMKAC 3 cut(s) 1136, 2392, 3319
XmnI GAANNNNTTC 2 cut(s) 1277, 2882
XspI CTAG 6 cut(s) 822, 867, 929, 986, 1059, 1622
ZrmI AGTACT 1 cut(s) 3595
Zsp2I ATGCAT 1 cut(s) 1108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.