No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0295551 |
| rosa_laevigata | RLG00000009400 |
| rosa_multiflora | Rmu_sc0002935.1_g000010 Rmu_sc0016819.1_g000001 Rmu_sc0031479.1_g000001 |
| rosa_samantha | Rh5BG325300 Rh5BG493900 Rh5DG336100 Rh6CG379700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 80, 124 |
| AgsI | TTSAA | 2 cut(s) | 161, 166 |
| AluBI | AGCT | 2 cut(s) | 107, 291 |
| AluI | AGCT | 2 cut(s) | 107, 291 |
| Alw26I | GTCTC | 3 cut(s) | 84, 134, 222 |
| ApeKI | GCWGC | 2 cut(s) | 142, 181 |
| AsuHPI | GGTGA | 2 cut(s) | 212, 224 |
| AsuII | TTCGAA | 1 cut(s) | 119 |
| BbvI | GCAGC | 2 cut(s) | 129, 193 |
| BccI | CCATC | 2 cut(s) | 184, 262 |
| BceAI | ACGGC | 1 cut(s) | 45 |
| BcoDI | GTCTC | 3 cut(s) | 84, 134, 222 |
| BisI | GCNGC | 2 cut(s) | 143, 182 |
| BlsI | GCNGC | 2 cut(s) | 144, 183 |
| BmsI | GCATC | 2 cut(s) | 238, 246 |
| Bpu14I | TTCGAA | 1 cut(s) | 119 |
| Bsa29I | ATCGAT | 2 cut(s) | 31, 52 |
| Bse3DI | GCAATG | 1 cut(s) | 137 |
| BseCI | ATCGAT | 2 cut(s) | 31, 52 |
| BseMI | GCAATG | 1 cut(s) | 137 |
| BseMII | CTCAG | 1 cut(s) | 184 |
| BseXI | GCAGC | 2 cut(s) | 129, 193 |
| Bsh1285I | CGRYCG | 1 cut(s) | 84 |
| BshVI | ATCGAT | 2 cut(s) | 31, 52 |
| BsiEI | CGRYCG | 1 cut(s) | 84 |
| BslFI | GGGAC | 1 cut(s) | 236 |
| BsmAI | GTCTC | 3 cut(s) | 84, 134, 222 |
| BsmFI | GGGAC | 1 cut(s) | 236 |
| Bsp119I | TTCGAA | 1 cut(s) | 119 |
| BspACI | CCGC | 2 cut(s) | 80, 124 |
| BspCNI | CTCAG | 1 cut(s) | 183 |
| BspDI | ATCGAT | 2 cut(s) | 31, 52 |
| BspT104I | TTCGAA | 1 cut(s) | 119 |
| BsrDI | GCAATG | 1 cut(s) | 137 |
| Bst4CI | ACNGT | 1 cut(s) | 199 |
| BstBI | TTCGAA | 1 cut(s) | 119 |
| BstDEI | CTNAG | 1 cut(s) | 170 |
| BstMAI | GTCTC | 3 cut(s) | 84, 134, 222 |
| BstMCI | CGRYCG | 1 cut(s) | 84 |
| BstV1I | GCAGC | 2 cut(s) | 129, 193 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 192 |
| Bsu15I | ATCGAT | 2 cut(s) | 31, 52 |
| BsuTUI | ATCGAT | 2 cut(s) | 31, 52 |
| BtgZI | GCGATG | 1 cut(s) | 162 |
| ClaI | ATCGAT | 2 cut(s) | 31, 52 |
| CviJI | RGCY | 4 cut(s) | 60, 107, 184, 291 |
| CviKI_1 | RGCY | 4 cut(s) | 60, 107, 184, 291 |
| DdeI | CTNAG | 1 cut(s) | 170 |
| FaqI | GGGAC | 1 cut(s) | 236 |
| Fnu4HI | GCNGC | 2 cut(s) | 143, 182 |
| Fsp4HI | GCNGC | 2 cut(s) | 143, 182 |
| GluI | GCNGC | 2 cut(s) | 143, 182 |
| HinfI | GANTC | 2 cut(s) | 54, 215 |
| HphI | GGTGA | 2 cut(s) | 212, 224 |
| Hpy166II | GTNNAC | 1 cut(s) | 195 |
| Hpy188I | TCNGA | 1 cut(s) | 68 |
| Hpy188III | TCNNGA | 1 cut(s) | 74 |
| Hpy8I | GTNNAC | 1 cut(s) | 195 |
| HpyAV | CCTTC | 4 cut(s) | 16, 48, 203, 233 |
| HpyCH4III | ACNGT | 1 cut(s) | 199 |
| HpyCH4V | TGCA | 1 cut(s) | 237 |
| HpyF3I | CTNAG | 1 cut(s) | 170 |
| LmnI | GCTCC | 1 cut(s) | 112 |
| LpnPI | CCDG | 2 cut(s) | 59, 226 |
| Lsp1109I | GCAGC | 2 cut(s) | 129, 193 |
| LweI | GCATC | 2 cut(s) | 238, 246 |
| MfeI | CAATTG | 2 cut(s) | 186, 255 |
| MluCI | AATT | 5 cut(s) | 97, 114, 161, 186, 255 |
| MlyI | GAGTC | 1 cut(s) | 224 |
| MnlI | CCTC | 3 cut(s) | 62, 265, 278 |
| MseI | TTAA | 1 cut(s) | 279 |
| MunI | CAATTG | 2 cut(s) | 186, 255 |
| NspV | TTCGAA | 1 cut(s) | 119 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 58 |
| PfeI | GAWTC | 1 cut(s) | 54 |
| PkrI | GCNGC | 2 cut(s) | 144, 183 |
| PleI | GAGTC | 1 cut(s) | 223 |
| PpsI | GAGTC | 1 cut(s) | 223 |
| SaqAI | TTAA | 1 cut(s) | 279 |
| SatI | GCNGC | 2 cut(s) | 143, 182 |
| SchI | GAGTC | 1 cut(s) | 224 |
| SetI | ASST | 5 cut(s) | 73, 109, 214, 225, 293 |
| SfaNI | GCATC | 2 cut(s) | 238, 246 |
| SfuI | TTCGAA | 1 cut(s) | 119 |
| SgeI | CNNG | 3 cut(s) | 86, 253, 257 |
| Sse9I | AATT | 5 cut(s) | 97, 114, 161, 186, 255 |
| SsiI | CCGC | 2 cut(s) | 80, 124 |
| TaaI | ACNGT | 1 cut(s) | 199 |
| TaqI | TCGA | 3 cut(s) | 31, 52, 119 |
| TasI | AATT | 5 cut(s) | 97, 114, 161, 186, 255 |
| TfiI | GAWTC | 1 cut(s) | 54 |
| Tru1I | TTAA | 1 cut(s) | 279 |
| Tru9I | TTAA | 1 cut(s) | 279 |
| TseI | GCWGC | 2 cut(s) | 142, 181 |