60S ribosomal Protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0123311 RchiOBHm_Chr3g0464741 RchiOBHm_Chr3g0464751 |
| rosa_roxburghii | Rroxscaffold_4G00290860 Rroxscaffold_6G00419990 |
| rosa_samantha | Rh1CG259100 Rh3BG055800 Rh3BG136300 Rh3CG138900 Rh3DG137800 Rh4CG123200 Rh5AG130600 Rh5BG543600 Rh6AG286100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 65 |
| AccII | CGCG | 1 cut(s) | 116 |
| AclWI | GGATC | 2 cut(s) | 110, 208 |
| AfaI | GTAC | 2 cut(s) | 17, 110 |
| AluBI | AGCT | 2 cut(s) | 58, 167 |
| AluI | AGCT | 2 cut(s) | 58, 167 |
| Alw26I | GTCTC | 1 cut(s) | 214 |
| AlwI | GGATC | 2 cut(s) | 110, 208 |
| AoxI | GGCC | 1 cut(s) | 79 |
| AspS9I | GGNCC | 1 cut(s) | 80 |
| AsuHPI | GGTGA | 1 cut(s) | 131 |
| BcoDI | GTCTC | 1 cut(s) | 214 |
| BmcAI | AGTACT | 1 cut(s) | 110 |
| BmgT120I | GGNCC | 1 cut(s) | 80 |
| BmsI | GCATC | 1 cut(s) | 108 |
| BsaBI | GATNNNNATC | 2 cut(s) | 38, 65 |
| BsaJI | CCNNGG | 1 cut(s) | 126 |
| Bse8I | GATNNNNATC | 2 cut(s) | 38, 65 |
| BseDI | CCNNGG | 1 cut(s) | 126 |
| BseGI | GGATG | 1 cut(s) | 162 |
| BseJI | GATNNNNATC | 2 cut(s) | 38, 65 |
| BseMII | CTCAG | 2 cut(s) | 80, 209 |
| BseRI | GAGGAG | 1 cut(s) | 75 |
| Bsh1236I | CGCG | 1 cut(s) | 116 |
| BshFI | GGCC | 1 cut(s) | 81 |
| BsmAI | GTCTC | 1 cut(s) | 214 |
| BsnI | GGCC | 1 cut(s) | 81 |
| Bsp143I | GATC | 3 cut(s) | 33, 102, 200 |
| BspANI | GGCC | 1 cut(s) | 81 |
| BspCNI | CTCAG | 2 cut(s) | 81, 210 |
| BspFNI | CGCG | 1 cut(s) | 116 |
| BspPI | GGATC | 2 cut(s) | 110, 208 |
| BssECI | CCNNGG | 1 cut(s) | 126 |
| BssMI | GATC | 3 cut(s) | 33, 102, 200 |
| BssT1I | CCWWGG | 1 cut(s) | 126 |
| Bst6I | CTCTTC | 1 cut(s) | 54 |
| BstC8I | GCNNGC | 1 cut(s) | 123 |
| BstDEI | CTNAG | 2 cut(s) | 89, 218 |
| BstF5I | GGATG | 1 cut(s) | 162 |
| BstFNI | CGCG | 1 cut(s) | 116 |
| BstKTI | GATC | 3 cut(s) | 36, 105, 203 |
| BstMAI | GTCTC | 1 cut(s) | 214 |
| BstMBI | GATC | 3 cut(s) | 33, 102, 200 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 122, 189 |
| BstUI | CGCG | 1 cut(s) | 116 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 149 |
| BsuRI | GGCC | 1 cut(s) | 81 |
| BtgZI | GCGATG | 1 cut(s) | 131 |
| BtsCI | GGATG | 1 cut(s) | 162 |
| Cac8I | GCNNGC | 1 cut(s) | 123 |
| Cfr13I | GGNCC | 1 cut(s) | 80 |
| Csp6I | GTAC | 2 cut(s) | 16, 109 |
| CviJI | RGCY | 4 cut(s) | 27, 58, 81, 167 |
| CviKI_1 | RGCY | 4 cut(s) | 27, 58, 81, 167 |
| CviQI | GTAC | 2 cut(s) | 16, 109 |
| DdeI | CTNAG | 2 cut(s) | 89, 218 |
| DpnI | GATC | 3 cut(s) | 35, 104, 202 |
| DpnII | GATC | 3 cut(s) | 33, 102, 200 |
| Eam1104I | CTCTTC | 1 cut(s) | 54 |
| EarI | CTCTTC | 1 cut(s) | 54 |
| Eco130I | CCWWGG | 1 cut(s) | 126 |
| EcoT14I | CCWWGG | 1 cut(s) | 126 |
| ErhI | CCWWGG | 1 cut(s) | 126 |
| FaiI | YATR | 1 cut(s) | 65 |
| FokI | GGATG | 1 cut(s) | 169 |
| HaeIII | GGCC | 1 cut(s) | 81 |
| HindIII | AAGCTT | 1 cut(s) | 165 |
| HphI | GGTGA | 1 cut(s) | 131 |
| Hpy166II | GTNNAC | 2 cut(s) | 18, 139 |
| Hpy188I | TCNGA | 4 cut(s) | 54, 90, 205, 219 |
| Hpy188III | TCNNGA | 1 cut(s) | 70 |
| Hpy8I | GTNNAC | 2 cut(s) | 18, 139 |
| HpyAV | CCTTC | 1 cut(s) | 147 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 122, 189 |
| HpyF3I | CTNAG | 2 cut(s) | 89, 218 |
| Kzo9I | GATC | 3 cut(s) | 33, 102, 200 |
| LpnPI | CCDG | 3 cut(s) | 8, 174, 191 |
| LweI | GCATC | 1 cut(s) | 108 |
| MalI | GATC | 3 cut(s) | 35, 104, 202 |
| MboI | GATC | 3 cut(s) | 33, 102, 200 |
| MboII | GAAGA | 3 cut(s) | 16, 41, 206 |
| MmeI | TCCRAC | 1 cut(s) | 141 |
| MnlI | CCTC | 2 cut(s) | 93, 96 |
| MseI | TTAA | 1 cut(s) | 232 |
| MslI | CAYNNNNRTG | 1 cut(s) | 147 |
| MvnI | CGCG | 1 cut(s) | 116 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 122, 189 |
| NdeII | GATC | 3 cut(s) | 33, 102, 200 |
| PsiI | TTATAA | 1 cut(s) | 65 |
| PspPI | GGNCC | 1 cut(s) | 80 |
| RsaI | GTAC | 2 cut(s) | 17, 110 |
| RsaNI | GTAC | 2 cut(s) | 16, 109 |
| RseI | CAYNNNNRTG | 1 cut(s) | 147 |
| SaqAI | TTAA | 1 cut(s) | 232 |
| Sau3AI | GATC | 3 cut(s) | 33, 102, 200 |
| Sau96I | GGNCC | 1 cut(s) | 80 |
| ScaI | AGTACT | 1 cut(s) | 110 |
| SetI | ASST | 3 cut(s) | 60, 132, 169 |
| SfaNI | GCATC | 1 cut(s) | 108 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 147 |
| StyI | CCWWGG | 1 cut(s) | 126 |
| TaqI | TCGA | 3 cut(s) | 42, 71, 105 |
| TatI | WGTACW | 2 cut(s) | 15, 108 |
| Tru1I | TTAA | 1 cut(s) | 232 |
| Tru9I | TTAA | 1 cut(s) | 232 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| ZrmI | AGTACT | 1 cut(s) | 110 |