Rh5CG430300

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0018611
Physical Location & Seq
Forward (+)
59595088 .. 59597535
2448 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG430300.1

Sequence Viewer

Length: 2100 bp
ATGGCTCACTGCAAAAATATTTTGAGAATTCCTAGTGTCATTTCAAGTTTGACAAGGCTTACAACAATCATTCTTTCAGGCTGCTCTAATCTTATTGAAATTCCCGAGAACATTGGGAATGTGGAATGTCTTGAAGAGTTGGATATAAGCAGAACTGCTATAAGGCAAATGCCATCATCCATTGTGTATCTCAAAAACCTTAAAGAGTTATCCTGGTCAAGGTGCAGTGGTCAAGTTTCTACATCACTGCTCTTTCCCTGTCTTCCAGAAGTATGCGCTGGACCGAACTTCTTGTTGCCTGCTTCATTATCTCCTTTTAGCTCTTTAGTGTCATTGAATTTAAGTTACTGCAATCTGATTGATGGAGCTCTCCCTAATTATATGGACCGCATGTCATCATTGATGCAGTTGAATTTAGGGGGAAACAATTTTACAAGCATACCTGAAAGTATTTCCCGACTTTCCAAGCTTGTAAGTCTTTACTTGAGGGGTTGTATCCTGTTGCAGTCATTGCGAGAGCTTCCATTGAGTATAAAATTGGTTTCTGCATTTGGTTGTATGTCACTTAAAAGTGATTCTGATCAGTATGAAGTATATTGTTCAAAATATGAAAACCAAGTTCTGATTCATAAGCGCACAACATCAACCAGATTTTGCCTTCTCATAACCAATTCACAATTTGCAGCATGGCTGAACAGATATCATGAGGTTAATGAGGTGGAGATAAGTTTACCGGTGAGAACTGCATATGGTTTATCACATAGAACTCATGGAAATATTCCATATTGGTTCAACAATAGAAGCAGCAACTTTTCTATAACAATCCCGCTTTCAGAGGACTTGACTAATAAGAGTAGGCTATGGATGGGATGTGCTTTCTATGTCGATTTGGAAGTTAATGAGAATTTTGATAGCAGTCCATATTTCAAAGTCAGGCACAAGTTTGATTGTTGTTTTGATACCATGGAAGGTCCTGGTGACACACAAACTCTATACCACGAGGTAAATGCTAAAGGTGTCCATTTGACTGGGTCAATTGGATATTGGATAATAATACCGCATCTGTGGTTTTCAGCCAGGTTGAATGCCTTCAATCAGTGCAGTAGCATCGAGGCTAACACAACAGTTGATAGCCCATACGTGGAGGTTAAAATGAGTGGTGCCCGTCTACTGTACAAAAGAGCAGATTTTATAGGGTTTATCCGAGCAATAAAATCGATGAATAAACTATCAAGAATTATGCAGAATAACAGTTCCTCTATAAGTCTGTTGGCTGAGGATGGTAGCTGCAAAATTGACTCGAGCATTTTGTTGAAAGAACATCTTAGCTCACTGCCTTCAGATTTAAAATGCTATGAGGGGCACGCCGGCTATGCGGGAAGAAATTACTACGTTATTAAAGGCAAAGTCGTTCATCCCCAGACCTCGTCTCTGTTAGGAGAAATCCTTCAGAAATATTCTGGTCAGCACTCGGTGTTTTATACAGAAATTTTTCCTCAATATGGAATTCCAGAATGGTTCTTCAGTGTGAATGGTTCCTCCGCAGCCTTCCCGCTAAATCCTATGAATGGGTGGAAAGGAATAGCTGCATGTGCCGTTTTCACAGTCCTTGACAATTTGGATCCTGAAAAGCCTGACATAGGCTTTGAGTTGAAAATTGGCGGTCGGAATATCAGTGGACCCATCACTGAATCCCTTACTAGTTTGAAGGTTGGTGGTTTCATGGGTATGTTTTATGGATCACGTGGGTCACTTTCACATCTTATGTCATCTGATTGCACTTCCACCATCAAAGTCAGGTTTTATAGTAAGAGCAAGAACATAACGGTGCAGAGTTGTGGGTATCAAATTGTATTCCATGAAAATATGGAAGAATTTATGGAAACAATACTGCAATGTTCAGTCGCATCGCAGACTTCTCAGTTGTCAAAAGATACAAGTAGAGAAGAACCACCGAAAGAAAAGGGGAACTCTCTCTACCCAAATAGAAAAGGAGAAAAGATACAAGTAGAGAAGAAACACCGAAAGAAAAGGAGAACTCTCTCTACCCGACTTTTGAAGTCTCCCTGTAGATCGATCTGTTGCTTCCTGTGTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

699

Amino Acids

78.4

Weight (kDa)

8.72

Isoelectric Point (pI)

46.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 14 - 74 1.8e-07 Leucine-rich repeat region
LRR_8 PF13855 108 - 165 4.6e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018611)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0060391
rosa_roxburghii Rroxscaffold_1G00020430
rosa_samantha Rh5AG394100 Rh5AG394300 Rh5BG406500 Rh5CG398000 Rh5CG430300 Rh5DG421100 Rh5DG421400 Rh5DG421600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1160
AccI GTMKAC 1 cut(s) 1168
AciI CCGC 7 cut(s) 388, 827, 1058, 1376, 1542, 1553, 1662
AclWI GGATC 3 cut(s) 1616, 1629, 1747
AcsI RAATTY 8 cut(s) 27, 99, 337, 412, 904, 1488, 1506, 1874
AcuI CTGAAG 3 cut(s) 1323, 1433, 1507
AcvI CACGTG 1 cut(s) 1745
AdeI CACNNNGTG 1 cut(s) 1474
AfaI GTAC 1 cut(s) 1175
AfiI CCNNNNNNNGG 5 cut(s) 219, 1141, 1502, 1568, 1640
AgeI ACCGGT 1 cut(s) 733
AhdI GACNNNNNGTC 1 cut(s) 391
AhlI ACTAGT 1 cut(s) 1700
AjnI CCWGG 3 cut(s) 212, 973, 1076
AjuI GAANNNNNNNTTGG 2 cut(s) 609, 641
AluBI AGCT 7 cut(s) 321, 368, 469, 520, 1287, 1329, 1586
AluI AGCT 7 cut(s) 321, 368, 469, 520, 1287, 1329, 1586
Alw21I GWGCWC 1 cut(s) 370
Alw26I GTCTC 2 cut(s) 1434, 2067
AlwI GGATC 3 cut(s) 1616, 1629, 1747
Ama87I CYCGRG 2 cut(s) 104, 1300
ApeKI GCWGC 6 cut(s) 81, 683, 804, 1287, 1544, 1586
ApoI RAATTY 8 cut(s) 27, 99, 337, 412, 904, 1488, 1506, 1874
ArsI GACNNNNNNTTYG 2 cut(s) 1628, 1660
AsiGI ACCGGT 1 cut(s) 733
Asp700I GAANNNNTTC 3 cut(s) 1088, 1446, 1491
AspLEI GCGC 2 cut(s) 278, 636
AspS9I GGNCC 4 cut(s) 281, 385, 971, 1679
AsuHPI GGTGA 2 cut(s) 748, 989
AvaI CYCGRG 2 cut(s) 104, 1300
AvaII GGWCC 4 cut(s) 281, 385, 971, 1679
BaeGI GKGCMC 2 cut(s) 1165, 1365
BamHI GGATCC 1 cut(s) 1621
BanI GGYRCC 1 cut(s) 1160
BanII GRGCYC 1 cut(s) 370
BauI CACGAG 1 cut(s) 998
BbrPI CACGTG 1 cut(s) 1745
BbsI GAAGAC 1 cut(s) 254
Bbv12I GWGCWC 1 cut(s) 370
BbvCI CCTCAGC 1 cut(s) 1275
BbvI GCAGC 6 cut(s) 68, 695, 816, 1274, 1556, 1573
BccI CCATC 6 cut(s) 181, 356, 859, 1274, 1691, 1796
BceAI ACGGC 1 cut(s) 1580
BcgI CGANNNNNNTGC 6 cut(s) 989, 1023, 1090, 1124, 1197, 1231
BciT130I CCWGG 3 cut(s) 214, 975, 1078
BciVI GTATCC 1 cut(s) 506
BclI TGATCA 1 cut(s) 580
BcoDI GTCTC 2 cut(s) 1434, 2067
BcuI ACTAGT 1 cut(s) 1700
BfaI CTAG 2 cut(s) 33, 1701
BfmI CTRYAG 1 cut(s) 2068
BfuI GTATCC 1 cut(s) 506
BisI GCNGC 6 cut(s) 82, 684, 805, 1288, 1545, 1587
BlsI GCNGC 6 cut(s) 83, 685, 806, 1289, 1546, 1588
Bme1390I CCNGG 3 cut(s) 214, 975, 1078
Bme18I GGWCC 4 cut(s) 281, 385, 971, 1679
BmeRI GACNNNNNGTC 1 cut(s) 391
BmeT110I CYCGRG 2 cut(s) 104, 1300
BmgT120I GGNCC 4 cut(s) 281, 385, 971, 1679
BmiI GGNNCC 4 cut(s) 1162, 1537, 1623, 1681
BmrFI CCNGG 3 cut(s) 214, 975, 1078
BmrI ACTGGG 1 cut(s) 1038
BmsI GCATC 4 cut(s) 393, 1069, 1116, 1916
BmuI ACTGGG 1 cut(s) 1038
BpiI GAAGAC 1 cut(s) 254
Bpu10I CCTNAGC 1 cut(s) 1275
BpuEI CTTGAG 1 cut(s) 505
Bsa29I ATCGAT 2 cut(s) 1217, 2075
BsaAI YACGTR 2 cut(s) 1141, 1745
BsaBI GATNNNNATC 1 cut(s) 579
BsaJI CCNNGG 1 cut(s) 963
BsaWI WCCGGW 1 cut(s) 733
Bsc4I CCNNNNNNNGG 5 cut(s) 219, 1141, 1502, 1568, 1640
Bse118I RCCGGY 2 cut(s) 733, 1367
Bse1I ACTGG 1 cut(s) 1033
Bse3DI GCAATG 2 cut(s) 509, 1901
Bse8I GATNNNNATC 1 cut(s) 579
BseBI CCWGG 3 cut(s) 214, 975, 1078
BseCI ATCGAT 2 cut(s) 1217, 2075
BseDI CCNNGG 1 cut(s) 963
BseGI GGATG 5 cut(s) 176, 870, 875, 1285, 1414
BseJI GATNNNNATC 1 cut(s) 579
BseLI CCNNNNNNNGG 5 cut(s) 219, 1141, 1502, 1568, 1640
BseMI GCAATG 2 cut(s) 509, 1901
BseMII CTCAG 2 cut(s) 1266, 1934
BseNI ACTGG 1 cut(s) 1033
BseSI GKGCMC 2 cut(s) 1165, 1365
BseXI GCAGC 6 cut(s) 68, 695, 816, 1274, 1556, 1573
BsgI GTGCAG 3 cut(s) 244, 1120, 1850
Bsh1285I CGRYCG 1 cut(s) 1666
BshNI GGYRCC 1 cut(s) 1160
BshTI ACCGGT 1 cut(s) 733
BshVI ATCGAT 2 cut(s) 1217, 2075
BsiEI CGRYCG 1 cut(s) 1666
BsiHKAI GWGCWC 1 cut(s) 370
BsiHKCI CYCGRG 2 cut(s) 104, 1300
BsiSI CCGG 2 cut(s) 734, 1368
BslI CCNNNNNNNGG 5 cut(s) 219, 1141, 1502, 1568, 1640
BsmAI GTCTC 2 cut(s) 1434, 2067
BsmBI CGTCTC 1 cut(s) 1434
BsmI GAATGC 1 cut(s) 1090
BsoBI CYCGRG 2 cut(s) 104, 1300
Bsp1286I GDGCHC 3 cut(s) 370, 1165, 1365
Bsp1407I TGTACA 1 cut(s) 1173
Bsp143I GATC 5 cut(s) 580, 1621, 1739, 2072, 2076
Bsp19I CCATGG 1 cut(s) 963
BspACI CCGC 7 cut(s) 388, 827, 1058, 1376, 1542, 1553, 1662
BspCNI CTCAG 2 cut(s) 1267, 1933
BspDI ATCGAT 2 cut(s) 1217, 2075
BspHI TCATGA 1 cut(s) 703
BspLI GGNNCC 4 cut(s) 1162, 1537, 1623, 1681
BspPI GGATC 3 cut(s) 1616, 1629, 1747
BspT107I GGYRCC 1 cut(s) 1160
BsrDI GCAATG 2 cut(s) 509, 1901
BsrFI RCCGGY 2 cut(s) 733, 1367
BsrGI TGTACA 1 cut(s) 1173
BsrI ACTGG 1 cut(s) 1033
BssAI RCCGGY 2 cut(s) 733, 1367
BssECI CCNNGG 1 cut(s) 963
BssMI GATC 5 cut(s) 580, 1621, 1739, 2072, 2076
BssSI CACGAG 1 cut(s) 998
BssT1I CCWWGG 1 cut(s) 963
Bst2BI CACGAG 1 cut(s) 998
Bst2UI CCWGG 3 cut(s) 214, 975, 1078
Bst4CI ACNGT 5 cut(s) 1126, 1173, 1253, 1606, 1828
Bst6I CTCTTC 1 cut(s) 129
BstAPI GCANNNNNTGC 1 cut(s) 511
BstAUI TGTACA 1 cut(s) 1173
BstBAI YACGTR 2 cut(s) 1141, 1745
BstC8I GCNNGC 3 cut(s) 300, 1365, 1369
BstDEI CTNAG 3 cut(s) 1275, 1325, 1920
BstDSI CCRYGG 1 cut(s) 963
BstENI CCTNNNNNAGG 2 cut(s) 217, 1638
BstF5I GGATG 5 cut(s) 176, 870, 875, 1285, 1414
BstHHI GCGC 2 cut(s) 278, 636
BstKTI GATC 5 cut(s) 583, 1624, 1742, 2075, 2079
BstMAI GTCTC 2 cut(s) 1434, 2067
BstMBI GATC 5 cut(s) 580, 1621, 1739, 2072, 2076
BstMCI CGRYCG 1 cut(s) 1666
BstMWI GCNNNNNNNGC 3 cut(s) 511, 1373, 1592
BstNI CCWGG 3 cut(s) 214, 975, 1078
BstNSI RCATGY 2 cut(s) 394, 1593
BstSCI CCNGG 3 cut(s) 212, 973, 1076
BstSFI CTRYAG 1 cut(s) 2068
BstSLI GKGCMC 2 cut(s) 1165, 1365
BstV1I GCAGC 6 cut(s) 68, 695, 816, 1274, 1556, 1573
BstV2I GAAGAC 1 cut(s) 254
BstX2I RGATCY 1 cut(s) 1621
BstXI CCANNNNNNTGG 1 cut(s) 1028
BstYI RGATCY 1 cut(s) 1621
Bsu15I ATCGAT 2 cut(s) 1217, 2075
BsuI GTATCC 1 cut(s) 506
BsuTUI ATCGAT 2 cut(s) 1217, 2075
BtgI CCRYGG 1 cut(s) 963
BtgZI GCGATG 1 cut(s) 1893
BtsCI GGATG 5 cut(s) 176, 870, 875, 1285, 1414
BtsI GCAGTG 4 cut(s) 7, 232, 245, 1331
BtsIMutI CAGTG 8 cut(s) 7, 232, 245, 1103, 1331, 1531, 1681, 1686
Cac8I GCNNGC 3 cut(s) 300, 1365, 1369
CciI TCATGA 1 cut(s) 703
CfoI GCGC 2 cut(s) 278, 636
Cfr10I RCCGGY 2 cut(s) 733, 1367
Cfr13I GGNCC 4 cut(s) 281, 385, 971, 1679
ClaI ATCGAT 2 cut(s) 1217, 2075
Csp6I GTAC 1 cut(s) 1174
CspAI ACCGGT 1 cut(s) 733
CviAII CATG 8 cut(s) 391, 687, 704, 770, 964, 1590, 1723, 1859
CviQI GTAC 1 cut(s) 1174
DdeI CTNAG 3 cut(s) 1275, 1325, 1920
DpnI GATC 5 cut(s) 582, 1623, 1741, 2074, 2078
DpnII GATC 5 cut(s) 580, 1621, 1739, 2072, 2076
DraI TTTAAA 1 cut(s) 1347
DraIII CACNNNGTG 1 cut(s) 1474
DriI GACNNNNNGTC 1 cut(s) 391
Eam1104I CTCTTC 1 cut(s) 129
Eam1105I GACNNNNNGTC 1 cut(s) 391
EarI CTCTTC 1 cut(s) 129
Ecl136II GAGCTC 1 cut(s) 368
Eco130I CCWWGG 1 cut(s) 963
Eco24I GRGCYC 1 cut(s) 370
Eco32I GATATC 1 cut(s) 701
Eco47I GGWCC 4 cut(s) 281, 385, 971, 1679
Eco53kI GAGCTC 1 cut(s) 368
Eco57I CTGAAG 3 cut(s) 1323, 1433, 1507
Eco72I CACGTG 1 cut(s) 1745
Eco88I CYCGRG 2 cut(s) 104, 1300
EcoICRI GAGCTC 1 cut(s) 368
EcoNI CCTNNNNNAGG 2 cut(s) 217, 1638
EcoO109I RGGNCCY 1 cut(s) 971
EcoRI GAATTC 2 cut(s) 27, 1506
EcoRII CCWGG 3 cut(s) 212, 973, 1076
EcoRV GATATC 1 cut(s) 701
EcoT14I CCWWGG 1 cut(s) 963
EcoT38I GRGCYC 1 cut(s) 370
ErhI CCWWGG 1 cut(s) 963
Esp3I CGTCTC 1 cut(s) 1434
FaeI CATG 8 cut(s) 394, 690, 707, 773, 967, 1593, 1726, 1862
FalI AAGNNNNNCTT 2 cut(s) 1308, 1340
FatI CATG 8 cut(s) 390, 686, 703, 769, 963, 1589, 1722, 1858
FauI CCCGC 3 cut(s) 834, 1369, 1560
FauNDI CATATG 1 cut(s) 748
FbaI TGATCA 1 cut(s) 580
FblI GTMKAC 1 cut(s) 1168
Fnu4HI GCNGC 6 cut(s) 82, 684, 805, 1288, 1545, 1587
FokI GGATG 5 cut(s) 163, 877, 882, 1292, 1401
FriOI GRGCYC 1 cut(s) 370
Fsp4HI GCNGC 6 cut(s) 82, 684, 805, 1288, 1545, 1587
FspBI CTAG 2 cut(s) 33, 1701
GlaI GCGC 2 cut(s) 277, 635
GluI GCNGC 6 cut(s) 82, 684, 805, 1288, 1545, 1587
HapII CCGG 2 cut(s) 734, 1368
HhaI GCGC 2 cut(s) 278, 636
Hin1II CATG 8 cut(s) 394, 690, 707, 773, 967, 1593, 1726, 1862
Hin6I GCGC 2 cut(s) 276, 634
HinP1I GCGC 2 cut(s) 276, 634
HindIII AAGCTT 1 cut(s) 467
HinfI GANTC 4 cut(s) 575, 625, 1298, 1691
HpaII CCGG 2 cut(s) 734, 1368
HphI GGTGA 2 cut(s) 748, 989
Hpy166II GTNNAC 3 cut(s) 731, 1169, 1679
Hpy188I TCNGA 9 cut(s) 357, 580, 624, 835, 1205, 1342, 1452, 1668, 1774
Hpy188III TCNNGA 8 cut(s) 104, 131, 266, 456, 704, 1233, 1511, 1625
Hpy8I GTNNAC 3 cut(s) 731, 1169, 1679
HpyAV CCTTC 7 cut(s) 668, 962, 1099, 1347, 1457, 1558, 1702
HpyCH4III ACNGT 5 cut(s) 1126, 1173, 1253, 1606, 1828
HpyCH4IV ACGT 3 cut(s) 1140, 1392, 1744
HpyF10VI GCNNNNNNNGC 3 cut(s) 511, 1373, 1592
HpyF3I CTNAG 3 cut(s) 1275, 1325, 1920
HpySE526I ACGT 3 cut(s) 1140, 1392, 1744
Hsp92II CATG 8 cut(s) 394, 690, 707, 773, 967, 1593, 1726, 1862
HspAI GCGC 2 cut(s) 276, 634
KroI GCCGGC 1 cut(s) 1367
KroNI GCCGGC 1 cut(s) 1369
Ksp22I TGATCA 1 cut(s) 580
Kzo9I GATC 5 cut(s) 580, 1621, 1739, 2072, 2076
LmnI GCTCC 1 cut(s) 365
Lsp1109I GCAGC 6 cut(s) 68, 695, 816, 1274, 1556, 1573
LweI GCATC 4 cut(s) 393, 1069, 1116, 1916
MaeI CTAG 2 cut(s) 33, 1701
MaeII ACGT 3 cut(s) 1140, 1392, 1744
MaeIII GTNAC 4 cut(s) 344, 561, 977, 1749
MalI GATC 5 cut(s) 582, 1623, 1741, 2074, 2078
MboI GATC 5 cut(s) 580, 1621, 1739, 2072, 2076
MboII GAAGA 7 cut(s) 146, 254, 1392, 1513, 1883, 1958, 2026
MfeI CAATTG 1 cut(s) 1035
MflI RGATCY 1 cut(s) 1621
MhlI GDGCHC 3 cut(s) 370, 1165, 1365
MlyI GAGTC 1 cut(s) 1292
MmeI TCCRAC 2 cut(s) 120, 1646
MroNI GCCGGC 1 cut(s) 1367
MroXI GAANNNNTTC 3 cut(s) 1088, 1446, 1491
MseI TTAA 8 cut(s) 201, 341, 567, 711, 897, 1149, 1346, 1398
MslI CAYNNNNRTG 2 cut(s) 1727, 1826
MspI CCGG 2 cut(s) 734, 1368
MspR9I CCNGG 3 cut(s) 214, 975, 1078
MunI CAATTG 1 cut(s) 1035
Mva1269I GAATGC 1 cut(s) 1090
MvaI CCWGG 3 cut(s) 214, 975, 1078
MwoI GCNNNNNNNGC 3 cut(s) 511, 1373, 1592
NaeI GCCGGC 1 cut(s) 1369
NcoI CCATGG 1 cut(s) 963
NdeI CATATG 1 cut(s) 748
NdeII GATC 5 cut(s) 580, 1621, 1739, 2072, 2076
NgoMIV GCCGGC 1 cut(s) 1367
NlaIII CATG 8 cut(s) 394, 690, 707, 773, 967, 1593, 1726, 1862
NlaIV GGNNCC 4 cut(s) 1162, 1537, 1623, 1681
NmuCI GTSAC 3 cut(s) 561, 977, 1749
NspI RCATGY 2 cut(s) 394, 1593
PaeR7I CTCGAG 1 cut(s) 1300
PagI TCATGA 1 cut(s) 703
PctI GAATGC 1 cut(s) 1090
PdiI GCCGGC 1 cut(s) 1369
PdmI GAANNNNTTC 3 cut(s) 1088, 1446, 1491
PfeI GAWTC 3 cut(s) 575, 625, 1691
PflFI GACNNNGTC 2 cut(s) 1030, 1426
PinAI ACCGGT 1 cut(s) 733
PkrI GCNGC 6 cut(s) 83, 685, 806, 1289, 1546, 1588
PleI GAGTC 1 cut(s) 1292
PmaCI CACGTG 1 cut(s) 1745
PmlI CACGTG 1 cut(s) 1745
PpsI GAGTC 1 cut(s) 1292
Ppu21I YACGTR 2 cut(s) 1141, 1745
PpuMI RGGWCCY 1 cut(s) 971
Psp124BI GAGCTC 1 cut(s) 370
Psp5II RGGWCCY 1 cut(s) 971
Psp6I CCWGG 3 cut(s) 212, 973, 1076
PspCI CACGTG 1 cut(s) 1745
PspGI CCWGG 3 cut(s) 212, 973, 1076
PspN4I GGNNCC 4 cut(s) 1162, 1537, 1623, 1681
PspPI GGNCC 4 cut(s) 281, 385, 971, 1679
PspPPI RGGWCCY 1 cut(s) 971
PspXI VCTCGAGB 1 cut(s) 1300
PsrI GAACNNNNNNTAC 4 cut(s) 1961, 1993, 2029, 2061
PsuI RGATCY 1 cut(s) 1621
PsyI GACNNNGTC 2 cut(s) 1030, 1426
RsaI GTAC 1 cut(s) 1175
RsaNI GTAC 1 cut(s) 1174
RseI CAYNNNNRTG 2 cut(s) 1727, 1826
SacI GAGCTC 1 cut(s) 370
SaqAI TTAA 8 cut(s) 201, 341, 567, 711, 897, 1149, 1346, 1398
SatI GCNGC 6 cut(s) 82, 684, 805, 1288, 1545, 1587
Sau3AI GATC 5 cut(s) 580, 1621, 1739, 2072, 2076
Sau96I GGNCC 4 cut(s) 281, 385, 971, 1679
SchI GAGTC 1 cut(s) 1292
ScrFI CCNGG 3 cut(s) 214, 975, 1078
SduI GDGCHC 3 cut(s) 370, 1165, 1365
SfaNI GCATC 4 cut(s) 393, 1069, 1116, 1916
SfcI CTRYAG 1 cut(s) 2068
Sfr274I CTCGAG 1 cut(s) 1300
SinI GGWCC 4 cut(s) 281, 385, 971, 1679
SlaI CTCGAG 1 cut(s) 1300
SmiMI CAYNNNNRTG 2 cut(s) 1727, 1826
SmlI CTYRAG 2 cut(s) 484, 1300
SmoI CTYRAG 2 cut(s) 484, 1300
SpeI ACTAGT 1 cut(s) 1700
SsiI CCGC 7 cut(s) 388, 827, 1058, 1376, 1542, 1553, 1662
SspI AATATT 3 cut(s) 19, 778, 1457
SspMI CTAG 2 cut(s) 33, 1701
SstI GAGCTC 1 cut(s) 370
StyD4I CCNGG 3 cut(s) 212, 973, 1076
StyI CCWWGG 1 cut(s) 963
TaaI ACNGT 5 cut(s) 1126, 1173, 1253, 1606, 1828
TaiI ACGT 3 cut(s) 1143, 1395, 1747
TaqI TCGA 5 cut(s) 885, 1110, 1217, 1301, 2075
TaqII GACCGA 1 cut(s) 298
TatI WGTACW 1 cut(s) 1173
TfiI GAWTC 3 cut(s) 575, 625, 1691
Tru1I TTAA 8 cut(s) 201, 341, 567, 711, 897, 1149, 1346, 1398
Tru9I TTAA 8 cut(s) 201, 341, 567, 711, 897, 1149, 1346, 1398
TscAI CASTG 8 cut(s) 14, 232, 252, 1103, 1338, 1531, 1681, 1693
TseFI GTSAC 3 cut(s) 561, 977, 1749
TseI GCWGC 6 cut(s) 81, 683, 804, 1287, 1544, 1586
Tsp45I GTSAC 3 cut(s) 561, 977, 1749
TspDTI ATGAA 9 cut(s) 294, 603, 617, 624, 1235, 1403, 1580, 1711, 1875
TspRI CASTG 8 cut(s) 14, 232, 252, 1103, 1338, 1531, 1681, 1693
Tth111I GACNNNGTC 2 cut(s) 1030, 1426
VpaK11BI GGWCC 4 cut(s) 281, 385, 971, 1679
XagI CCTNNNNNAGG 2 cut(s) 217, 1638
XapI RAATTY 8 cut(s) 27, 99, 337, 412, 904, 1488, 1506, 1874
XceI RCATGY 2 cut(s) 394, 1593
XhoI CTCGAG 1 cut(s) 1300
XmiI GTMKAC 1 cut(s) 1168
XmnI GAANNNNTTC 3 cut(s) 1088, 1446, 1491
XspI CTAG 2 cut(s) 33, 1701
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.