Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0008274

Physical Location & Seq

Genomic Coordinates Forward (+)

64648394 .. 64654979

Gene Structure 6586 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG463700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGCCTGTGAGCGATGCAATGAAACTGCGAAGGTTTGATATGTCTCACAGATCAAAGGAAGAAAAGGATAAGTGGTCTGATTTCAAGTACTATGAGGACAAGTATTATAATGAGTTAAAGAAAGGTAGTTATAAAATAAAAAATTCTGATTCAACTTACAGATGTCCGTTTTGCCATGAGAAAAGGAGGCAAAGTTACCAACTTAGGGAGCTTTCACGACATGCTTCTTCTATCGGCAGAGGCTCACATAGCAGGGGTATAAAAGATGAAGCCAAGCACTGGGCTTTGAAGAGTTATATAGATAAATATGTTGCTGTGAAGAGTCGGTTAGAATCTGCAGACAAGATAGAACGGCCTAGAGAACTTGCACCCAAGGTAGGAGGACCTGAACAATCTGCAGTCAAGCTAGAAGGGCCTAGAGATCCTGCTCCCAAGAGAGAACGGGAACCTGCACCCATCAGAGAACTTCCTATAGAGCCTGCACCAAAGAGAGAACGCCATTTAGAGCCTGCACCACAGACAGAATCCCCTAGACTGAATGATGATAAATTGTTTGTATGGCCTGTGATGGGCGTTTTGGCAAACATTAAAACTGAGTTCAAAGGTGGGAAACATGTTGGCGAAAGTGGTTCTAAAATGAAAGCTGAGTTGACAGCAAAAGGTTTTAACCCTGTGAGGGTTCATCCGTTATGGAATTTTCGGGGTCACTCTGGTTTTGCAATTGTTGAATTTGAGAATAACTGGGAGGGTTTCAACAATGGAATGTCCTTTGAGAAAAGTTTTGAAGTTGAGCGCCATGGAAAAAGGGACTATAATCTGATGAGGAATAAAGGTGATCAATTATATGGATGGGTTGCTCGGGATGATGATTACAATTCAAGAAGCATTGTAAGTGATTATCTTTGCAAGAATGGAGATTTGAAAACTCTTTCTGGTCAGCAAGCTGAGGAACAGAGAAAAACTACAAAGCTTGTATCCAATCTTAAAAACACCTTGGAGATAAAGAATTCACATCTTGAGGAGATGCAAAACAAATATCATAAGACTGCTAATTCCTTAAACAAGGTAGTGCTTGAAAGGGATGCGATACTTAAAGCTTTCAATGACGAAAGAGAGAAAAGGGAACAAATGGAAAAAGAACAGCTCAGCAGAATATTAAGGGACCATGAGAAAGCCGCAGAGCAGTTGGAAAATCAAAAAAAAGAGCTTGCGCGCCGTGAGAAGCAACTGCAACAACGCAGAGCACAAAATGATAGCGAGAGGAGGAAACTCCATCATGATAGGCAAATGAATGCAAGGGCTACACTGGAACAGAAAAAAGCTGATGAAAATATGTTACGGTTGGCTGAAGAACAAAAGAAACAAAAGGAGGAACTTCGTAAAAAAGTCATTCAATTGGAAAAGGAGCTGGAAAAAAAACAAGCACTGGAGCTGGAGATAGAGCAGATGAGAGGTGCTATAAAGACGATGAAACACATGGATGAGGATGAGGACATGGATGCCAAGAAGAAGATTGATGAGATCGAACAAAACTTGGAGGAGAAGGAGCAGGAGTATGATGCTGTTGAAGCACTTCATCAAGCGCTTGTGGTCAAGGAGCGGAGAAATAATGATGAAGTGCAGGAGGCTCGCAAGGAGCTAGTCAATGGATTATGGGATTCAACAAGCCAGGGCAATAAGACCCGTGTTCTTATTGGTGTGAAGAGAATGGGAGACCTTGACGTCAGACCATTTCAGATTGCTATCAAGAACAGATATTCTAAAAAAGAAGCGGATGTGAAGACATTGGAGGTATGCTCTCTTTGGGAGACATATCTTGCGGATCCAAACTGGCATCCATTCAAGATCATTACTGATAAAGAAGGGCATTTTAAGGAGATTATAGATGAAGAAGATGAAAAACTGGCAGGTTTGAAGAATGAGCTTGGTGATGAAGTGGCCCAGGCAGTTGTCACTGCCATGATGGAACTGAATGAGTATAATCCCAGTGGCAGGTATTCAGTAAGAGAGCTATGGAACTACAAAGAAGGGAGGAAGGCGACTTTGAAAGAGGGAGCAAGTTATATTCTGAAGCAGTGGAAACTGCAGAAGGGTCGGAGAAGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016458 GO:0019222 GO:0030677 GO:0030681 GO:0031047 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044728 GO:0046483 GO:0048519 GO:0050789 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080188 GO:0090304 GO:1901360 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

XH XS zf-XS

Protein Analysis

702

Amino Acids

82.39

Weight (kDa)

9.06

Isoelectric Point (pI)

48.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-XS	PF03470	55 - 96	2.7e-11	XS zinc finger domain
XS	PF03468	182 - 293	1.9e-36	XS domain
XH	PF03469	568 - 697	1.5e-54	XH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13790 AT1G13790
fragaria_vesca	FvH4_3g36250 FvH4_3g36250 FvH4_3g36250 FvH4_3g36250 FvH4_3g36250 FvH4_3g36250 FvH4_3g36250
malus_domestica	MD00G1012600.v1.1
prunus_persica	Prupe.6G075800_v2.0.a1
pyrus_communis	pycom11g08830
rosa_chinensis	RchiOBHm_Chr5g0065061
rosa_laevigata	RLG00000035749
rosa_multiflora	Rmu_sc0029223.1_g000001
rosa_roxburghii	Rroxscaffold_1G00016260
rosa_rugosa	Rorug05G0367300 Rorug05G0367400
rosa_samantha	Rh5AG426000 Rh5BG441100 Rh5CG463700 Rh5DG453800
rosa_wichuraiana	Rw5G040010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	108, 132
AasI	GACNNNNNNGTC	1 cut(s)	1721
AatII	GACGTC	1 cut(s)	1725
Acc36I	ACCTGC	3 cut(s)	457, 1898, 1983
AccB7I	CCANNNNNTGG	1 cut(s)	279
AccBSI	CCGCTC	1 cut(s)	1600
AccII	CGCG	1 cut(s)	1213
AciI	CCGC	4 cut(s)	1176, 1600, 1772, 1820
AclWI	GGATC	3 cut(s)	416, 1817, 1830
AcsI	RAATTY	4 cut(s)	142, 694, 728, 1006
AcuI	CTGAAG	2 cut(s)	1368, 2090
AcyI	GRCGYC	1 cut(s)	1722
AfaI	GTAC	1 cut(s)	89
AfeI	AGCGCT	1 cut(s)	1584
AfiI	CCNNNNNNNGG	6 cut(s)	205, 279, 377, 569, 676, 1992
AflIII	ACRYGT	1 cut(s)	613
AjnI	CCWGG	2 cut(s)	1668, 1941
Alw21I	GWGCWC	1 cut(s)	1246
Alw26I	GTCTC	3 cut(s)	48, 1707, 1802
AlwI	GGATC	3 cut(s)	416, 1817, 1830
Ama87I	CYCGRG	1 cut(s)	858
Aor51HI	AGCGCT	1 cut(s)	1584
AoxI	GGCC	4 cut(s)	353, 413, 560, 1938
ApoI	RAATTY	4 cut(s)	142, 694, 728, 1006
Asp700I	GAANNNNTTC	1 cut(s)	1572
AspLEI	GCGC	4 cut(s)	795, 1213, 1215, 1585
AspS9I	GGNCC	4 cut(s)	383, 413, 1162, 1939
AsuHPI	GGTGA	2 cut(s)	845, 1940
AvaI	CYCGRG	1 cut(s)	858
AvaII	GGWCC	2 cut(s)	383, 1162
BamHI	GGATCC	1 cut(s)	1822
BbsI	GAAGAC	1 cut(s)	1787
Bbv12I	GWGCWC	1 cut(s)	1246
BbvCI	CCTCAGC	1 cut(s)	945
BccI	CCATC	5 cut(s)	464, 562, 843, 1281, 1957
BceAI	ACGGC	2 cut(s)	368, 1200
BcgI	CGANNNNNNTGC	4 cut(s)	1610, 1644, 2075, 2109
BciT130I	CCWGG	2 cut(s)	1670, 1943
BciVI	GTATCC	1 cut(s)	985
BclI	TGATCA	1 cut(s)	835
BcoDI	GTCTC	3 cut(s)	48, 1707, 1802
BfaI	CTAG	5 cut(s)	357, 407, 417, 531, 1640
BfmI	CTRYAG	4 cut(s)	336, 396, 471, 2084
BfoI	RGCGCY	2 cut(s)	796, 1586
BfuAI	ACCTGC	3 cut(s)	457, 1898, 1983
BfuI	GTATCC	1 cut(s)	985
BisI	GCNGC	1 cut(s)	1176
BlpI	GCTNAGC	1 cut(s)	1145
BlsI	GCNGC	1 cut(s)	1177
BmcAI	AGTACT	1 cut(s)	89
Bme1390I	CCNGG	2 cut(s)	1670, 1943
Bme18I	GGWCC	2 cut(s)	383, 1162
BmeT110I	CYCGRG	1 cut(s)	858
BmgT120I	GGNCC	4 cut(s)	383, 413, 1162, 1939
BmiI	GGNNCC	3 cut(s)	447, 1163, 1824
BmrFI	CCNGG	2 cut(s)	1670, 1943
BmrI	ACTGGG	3 cut(s)	289, 751, 1980
BmsI	GCATC	6 cut(s)	4, 1014, 1072, 1489, 1549, 1843
BmuI	ACTGGG	3 cut(s)	289, 751, 1980
BpiI	GAAGAC	1 cut(s)	1787
BplI	GAGNNNNNCTC	2 cut(s)	1781, 1813
BpmI	CTGGAG	2 cut(s)	1448, 1454
Bpu10I	CCTNAGC	1 cut(s)	945
Bpu1102I	GCTNAGC	1 cut(s)	1145
BpuEI	CTTGAG	1 cut(s)	1037
BsaBI	GATNNNNATC	1 cut(s)	1742
BsaHI	GRCGYC	1 cut(s)	1722
BsaI	GGTCTC	1 cut(s)	1707
BsaJI	CCNNGG	5 cut(s)	372, 796, 993, 1669, 1941
BsaXI	ACNNNNNCTCC	4 cut(s)	178, 208, 1538, 1568
Bsc4I	CCNNNNNNNGG	6 cut(s)	205, 279, 377, 569, 676, 1992
Bse1I	ACTGG	7 cut(s)	284, 746, 1311, 1431, 1835, 1908, 1986
Bse3DI	GCAATG	1 cut(s)	24
Bse8I	GATNNNNATC	1 cut(s)	1742
BseBI	CCWGG	2 cut(s)	1670, 1943
BseDI	CCNNGG	5 cut(s)	372, 796, 993, 1669, 1941
BseGI	GGATG	9 cut(s)	682, 854, 868, 1087, 1486, 1492, 1504, 1780, 1834
BseJI	GATNNNNATC	1 cut(s)	1742
BseLI	CCNNNNNNNGG	6 cut(s)	205, 279, 377, 569, 676, 1992
BseMI	GCAATG	1 cut(s)	24
BseMII	CTCAG	4 cut(s)	585, 636, 936, 1159
BseNI	ACTGG	7 cut(s)	284, 746, 1311, 1431, 1835, 1908, 1986
BsePI	GCGCGC	1 cut(s)	1211
BseRI	GAGGAG	3 cut(s)	1034, 1276, 1553
BsgI	GTGCAG	4 cut(s)	435, 465, 495, 1640
Bsh1236I	CGCG	1 cut(s)	1213
BshFI	GGCC	4 cut(s)	355, 415, 562, 1940
BsiHKAI	GWGCWC	1 cut(s)	1246
BsiHKCI	CYCGRG	1 cut(s)	858
BslFI	GGGAC	2 cut(s)	821, 1175
BslI	CCNNNNNNNGG	6 cut(s)	205, 279, 377, 569, 676, 1992
BsmAI	GTCTC	3 cut(s)	48, 1707, 1802
BsmFI	GGGAC	2 cut(s)	821, 1175
BsmI	GAATGC	1 cut(s)	1297
BsnI	GGCC	4 cut(s)	355, 415, 562, 1940
Bso31I	GGTCTC	1 cut(s)	1707
BsoBI	CYCGRG	1 cut(s)	858
Bsp1286I	GDGCHC	1 cut(s)	1246
Bsp143I	GATC	6 cut(s)	50, 421, 835, 1521, 1822, 1845
Bsp1720I	GCTNAGC	1 cut(s)	1145
Bsp19I	CCATGG	1 cut(s)	796
BspACI	CCGC	4 cut(s)	1176, 1600, 1772, 1820
BspANI	GGCC	4 cut(s)	355, 415, 562, 1940
BspCNI	CTCAG	4 cut(s)	586, 637, 937, 1158
BspFNI	CGCG	1 cut(s)	1213
BspHI	TCATGA	1 cut(s)	1276
BspLI	GGNNCC	3 cut(s)	447, 1163, 1824
BspMAI	CTGCAG	3 cut(s)	340, 400, 2088
BspMI	ACCTGC	3 cut(s)	457, 1898, 1983
BspPI	GGATC	3 cut(s)	416, 1817, 1830
BspTNI	GGTCTC	1 cut(s)	1707
BsrBI	CCGCTC	1 cut(s)	1600
BsrDI	GCAATG	1 cut(s)	24
BsrI	ACTGG	7 cut(s)	284, 746, 1311, 1431, 1835, 1908, 1986
BssECI	CCNNGG	5 cut(s)	372, 796, 993, 1669, 1941
BssHII	GCGCGC	1 cut(s)	1211
BssMI	GATC	6 cut(s)	50, 421, 835, 1521, 1822, 1845
BssNI	GRCGYC	1 cut(s)	1722
BssT1I	CCWWGG	3 cut(s)	372, 796, 993
Bst2UI	CCWGG	2 cut(s)	1670, 1943
Bst4CI	ACNGT	1 cut(s)	1341
Bst6I	CTCTTC	3 cut(s)	284, 314, 1697
BstACI	GRCGYC	1 cut(s)	1722
BstC8I	GCNNGC	6 cut(s)	480, 510, 942, 1209, 1213, 1630
BstDEI	CTNAG	5 cut(s)	203, 594, 645, 945, 1145
BstDSI	CCRYGG	1 cut(s)	796
BstF5I	GGATG	9 cut(s)	682, 854, 868, 1087, 1486, 1492, 1504, 1780, 1834
BstFNI	CGCG	1 cut(s)	1213
BstH2I	RGCGCY	2 cut(s)	796, 1586
BstHHI	GCGC	4 cut(s)	795, 1213, 1215, 1585
BstKTI	GATC	6 cut(s)	53, 424, 838, 1524, 1825, 1848
BstMAI	GTCTC	3 cut(s)	48, 1707, 1802
BstMBI	GATC	6 cut(s)	50, 421, 835, 1521, 1822, 1845
BstMWI	GCNNNNNNNGC	3 cut(s)	249, 412, 1568
BstNI	CCWGG	2 cut(s)	1670, 1943
BstNSI	RCATGY	2 cut(s)	224, 617
BstSCI	CCNGG	2 cut(s)	1668, 1941
BstSFI	CTRYAG	4 cut(s)	336, 396, 471, 2084
BstUI	CGCG	1 cut(s)	1213
BstV2I	GAAGAC	1 cut(s)	1787
BstX2I	RGATCY	2 cut(s)	421, 1822
BstYI	RGATCY	2 cut(s)	421, 1822
BsuI	GTATCC	1 cut(s)	985
BsuRI	GGCC	4 cut(s)	355, 415, 562, 1940
BtgI	CCRYGG	1 cut(s)	796
BtgZI	GCGATG	1 cut(s)	27
BtsCI	GGATG	9 cut(s)	682, 854, 868, 1087, 1486, 1492, 1504, 1780, 1834
BtsI	GCAGTG	2 cut(s)	1953, 2081
BtsIMutI	CAGTG	6 cut(s)	277, 1304, 1424, 1953, 1993, 2081
BveI	ACCTGC	3 cut(s)	457, 1898, 1983
Cac8I	GCNNGC	6 cut(s)	480, 510, 942, 1209, 1213, 1630
CciI	TCATGA	1 cut(s)	1276
CfoI	GCGC	4 cut(s)	795, 1213, 1215, 1585
Cfr13I	GGNCC	4 cut(s)	383, 413, 1162, 1939
Csp6I	GTAC	1 cut(s)	88
CviAII	CATG	9 cut(s)	176, 221, 614, 797, 1166, 1277, 1477, 1495, 1960
CviQI	GTAC	1 cut(s)	88
DdeI	CTNAG	5 cut(s)	203, 594, 645, 945, 1145
DpnI	GATC	6 cut(s)	52, 423, 837, 1523, 1824, 1847
DpnII	GATC	6 cut(s)	50, 421, 835, 1521, 1822, 1845
DrdI	GACNNNNNNGTC	1 cut(s)	1721
DseDI	GACNNNNNNGTC	1 cut(s)	1721
Eam1104I	CTCTTC	3 cut(s)	284, 314, 1697
EarI	CTCTTC	3 cut(s)	284, 314, 1697
Eco130I	CCWWGG	3 cut(s)	372, 796, 993
Eco31I	GGTCTC	1 cut(s)	1707
Eco47I	GGWCC	2 cut(s)	383, 1162
Eco47III	AGCGCT	1 cut(s)	1584
Eco57I	CTGAAG	2 cut(s)	1368, 2090
Eco88I	CYCGRG	1 cut(s)	858
EcoO109I	RGGNCCY	2 cut(s)	383, 413
EcoRI	GAATTC	1 cut(s)	1006
EcoRII	CCWGG	2 cut(s)	1668, 1941
EcoT14I	CCWWGG	3 cut(s)	372, 796, 993
ErhI	CCWWGG	3 cut(s)	372, 796, 993
FaeI	CATG	9 cut(s)	179, 224, 617, 800, 1169, 1280, 1480, 1498, 1963
FaqI	GGGAC	2 cut(s)	821, 1175
FatI	CATG	9 cut(s)	175, 220, 613, 796, 1165, 1276, 1476, 1494, 1959
FbaI	TGATCA	1 cut(s)	835
Fnu4HI	GCNGC	1 cut(s)	1176
FokI	GGATG	9 cut(s)	669, 861, 875, 1094, 1493, 1499, 1511, 1787, 1821
Fsp4HI	GCNGC	1 cut(s)	1176
FspBI	CTAG	5 cut(s)	357, 407, 417, 531, 1640
GlaI	GCGC	4 cut(s)	794, 1212, 1214, 1584
GluI	GCNGC	1 cut(s)	1176
GsuI	CTGGAG	2 cut(s)	1448, 1454
HaeII	RGCGCY	2 cut(s)	796, 1586
HaeIII	GGCC	4 cut(s)	355, 415, 562, 1940
HhaI	GCGC	4 cut(s)	795, 1213, 1215, 1585
Hin1I	GRCGYC	1 cut(s)	1722
Hin1II	CATG	9 cut(s)	179, 224, 617, 800, 1169, 1280, 1480, 1498, 1963
Hin6I	GCGC	4 cut(s)	793, 1211, 1213, 1583
HinP1I	GCGC	4 cut(s)	793, 1211, 1213, 1583
HincII	GTYRAC	1 cut(s)	651
HindII	GTYRAC	1 cut(s)	651
HindIII	AAGCTT	2 cut(s)	968, 1095
HinfI	GANTC	5 cut(s)	149, 322, 332, 524, 1658
HphI	GGTGA	2 cut(s)	845, 1940
Hpy166II	GTNNAC	1 cut(s)	651
Hpy188I	TCNGA	8 cut(s)	79, 148, 461, 819, 1727, 1737, 2070, 2097
Hpy188III	TCNNGA	7 cut(s)	216, 860, 879, 1016, 1277, 1747, 1843
Hpy8I	GTNNAC	1 cut(s)	651
HpyAV	CCTTC	7 cut(s)	24, 404, 1537, 1856, 2021, 2029, 2083
HpyCH4III	ACNGT	1 cut(s)	1341
HpyCH4IV	ACGT	1 cut(s)	1722
HpyF10VI	GCNNNNNNNGC	3 cut(s)	249, 412, 1568
HpyF3I	CTNAG	5 cut(s)	203, 594, 645, 945, 1145
HpySE526I	ACGT	1 cut(s)	1722
Hsp92I	GRCGYC	1 cut(s)	1722
Hsp92II	CATG	9 cut(s)	179, 224, 617, 800, 1169, 1280, 1480, 1498, 1963
HspAI	GCGC	4 cut(s)	793, 1211, 1213, 1583
Ksp22I	TGATCA	1 cut(s)	835
Kzo9I	GATC	6 cut(s)	50, 421, 835, 1521, 1822, 1845
LmnI	GCTCC	8 cut(s)	208, 433, 1405, 1429, 1546, 1597, 1636, 2054
LweI	GCATC	6 cut(s)	4, 1014, 1072, 1489, 1549, 1843
MaeI	CTAG	5 cut(s)	357, 407, 417, 531, 1640
MaeII	ACGT	1 cut(s)	1722
MaeIII	GTNAC	4 cut(s)	194, 704, 1335, 1951
MalI	GATC	6 cut(s)	52, 423, 837, 1523, 1824, 1847
MbiI	CCGCTC	1 cut(s)	1600
MboI	GATC	6 cut(s)	50, 421, 835, 1521, 1822, 1845
MfeI	CAATTG	2 cut(s)	720, 1394
MflI	RGATCY	2 cut(s)	421, 1822
MhlI	GDGCHC	1 cut(s)	1246
MlyI	GAGTC	1 cut(s)	331
MmeI	TCCRAC	2 cut(s)	1167, 2075
MroXI	GAANNNNTTC	1 cut(s)	1572
MseI	TTAA	8 cut(s)	116, 588, 666, 984, 1058, 1092, 1157, 1872
MslI	CAYNNNNRTG	2 cut(s)	1479, 1958
MspR9I	CCNGG	2 cut(s)	1670, 1943
MunI	CAATTG	2 cut(s)	720, 1394
Mva1269I	GAATGC	1 cut(s)	1297
MvaI	CCWGG	2 cut(s)	1670, 1943
MvnI	CGCG	1 cut(s)	1213
MwoI	GCNNNNNNNGC	3 cut(s)	249, 412, 1568
NcoI	CCATGG	1 cut(s)	796
NdeII	GATC	6 cut(s)	50, 421, 835, 1521, 1822, 1845
NlaIII	CATG	9 cut(s)	179, 224, 617, 800, 1169, 1280, 1480, 1498, 1963
NlaIV	GGNNCC	3 cut(s)	447, 1163, 1824
NmuCI	GTSAC	2 cut(s)	704, 1951
NspI	RCATGY	2 cut(s)	224, 617
PagI	TCATGA	1 cut(s)	1276
PauI	GCGCGC	1 cut(s)	1211
PciI	ACATGT	1 cut(s)	613
PctI	GAATGC	1 cut(s)	1297
PdmI	GAANNNNTTC	1 cut(s)	1572
PfeI	GAWTC	4 cut(s)	149, 332, 524, 1658
PflMI	CCANNNNNTGG	1 cut(s)	279
PkrI	GCNGC	1 cut(s)	1177
PleI	GAGTC	1 cut(s)	330
PpsI	GAGTC	1 cut(s)	330
PpuMI	RGGWCCY	1 cut(s)	383
PscI	ACATGT	1 cut(s)	613
PsiI	TTATAA	2 cut(s)	108, 132
Psp5II	RGGWCCY	1 cut(s)	383
Psp6I	CCWGG	2 cut(s)	1668, 1941
PspGI	CCWGG	2 cut(s)	1668, 1941
PspN4I	GGNNCC	3 cut(s)	447, 1163, 1824
PspPI	GGNCC	4 cut(s)	383, 413, 1162, 1939
PspPPI	RGGWCCY	1 cut(s)	383
PstI	CTGCAG	3 cut(s)	340, 400, 2088
PsuI	RGATCY	2 cut(s)	421, 1822
PteI	GCGCGC	1 cut(s)	1211
RsaI	GTAC	1 cut(s)	89
RsaNI	GTAC	1 cut(s)	88
RseI	CAYNNNNRTG	2 cut(s)	1479, 1958
SaqAI	TTAA	8 cut(s)	116, 588, 666, 984, 1058, 1092, 1157, 1872
SatI	GCNGC	1 cut(s)	1176
Sau3AI	GATC	6 cut(s)	50, 421, 835, 1521, 1822, 1845
Sau96I	GGNCC	4 cut(s)	383, 413, 1162, 1939
ScaI	AGTACT	1 cut(s)	89
SchI	GAGTC	1 cut(s)	331
ScrFI	CCNGG	2 cut(s)	1670, 1943
SduI	GDGCHC	1 cut(s)	1246
SfaNI	GCATC	6 cut(s)	4, 1014, 1072, 1489, 1549, 1843
SfcI	CTRYAG	4 cut(s)	336, 396, 471, 2084
SinI	GGWCC	2 cut(s)	383, 1162
SmiMI	CAYNNNNRTG	2 cut(s)	1479, 1958
SmlI	CTYRAG	1 cut(s)	1016
SmoI	CTYRAG	1 cut(s)	1016
SsiI	CCGC	4 cut(s)	1176, 1600, 1772, 1820
SspI	AATATT	1 cut(s)	1155
SspMI	CTAG	5 cut(s)	357, 407, 417, 531, 1640
StyD4I	CCNGG	2 cut(s)	1668, 1941
StyI	CCWWGG	3 cut(s)	372, 796, 993
TaaI	ACNGT	1 cut(s)	1341
TaiI	ACGT	1 cut(s)	1725
TaqI	TCGA	1 cut(s)	1524
TatI	WGTACW	1 cut(s)	87
TauI	GCSGC	1 cut(s)	1178
TfiI	GAWTC	4 cut(s)	149, 332, 524, 1658
Tru1I	TTAA	8 cut(s)	116, 588, 666, 984, 1058, 1092, 1157, 1872
Tru9I	TTAA	8 cut(s)	116, 588, 666, 984, 1058, 1092, 1157, 1872
TscAI	CASTG	6 cut(s)	284, 1311, 1431, 1960, 1993, 2081
TseFI	GTSAC	2 cut(s)	704, 1951
Tsp45I	GTSAC	2 cut(s)	704, 1951
TspGWI	ACGGA	2 cut(s)	156, 675
TspRI	CASTG	6 cut(s)	284, 1311, 1431, 1960, 1993, 2081
Van91I	CCANNNNNTGG	1 cut(s)	279
VpaK11BI	GGWCC	2 cut(s)	383, 1162
XapI	RAATTY	4 cut(s)	142, 694, 728, 1006
XceI	RCATGY	2 cut(s)	224, 617
XmnI	GAANNNNTTC	1 cut(s)	1572
XspI	CTAG	5 cut(s)	357, 407, 417, 531, 1640
ZraI	GACGTC	1 cut(s)	1723
ZrmI	AGTACT	1 cut(s)	89

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.