Rh5DG301300

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0014696
Physical Location & Seq
Reverse (-)
37888274 .. 37892951
4678 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG301300.1

Sequence Viewer

Length: 1803 bp
ATGAAGAGCAGGAGCCGTTTCAATCTGTTTCTCAAGGGCCTAATATTCATTGGAGTCCTTTCCTTCTGCACTGCGGTATGTAAGGGAGGTGAGTCATCGGAATTTGAATCATTGCTGAGGTTCATTAGAGCTGTTGATCCTGAACATGTATTGAATGTTGGCCACAATGTGCCATATTCCTGCAAGCTCAAGTTGAAAGGTGTGGAATGCAACCCCGAGGGTAATAGCATAACAGAAATAAGGCTTGAAAATCTGCATCTTAGTGGTACACTTGATGTAGATTCACTATGCAAGCTCCCGAATCTACGAGTTGTTAGCTTAGCAAGAAACCGCATCCGAGGAACTATTTCTAACTCCATAGTGCACTGCACAAGACTAGCCTATTTGGATCTAAGCAACAATCTTCTGAGTGGGAGTGTGCCTAAGGCTCTGAATAAACTGAAGTATCAAAGGAGATTGTACATCGCCAACAATTATTTTACTAGGGACATCCCAAGTTCGAGAGAGGAATATCAACTTCATCCACATTTCAAGGAATCAAAGACATCACAGCGATATGATGCCATGGACAAAGTAGAGGCTGGGCATCCAATGCGGATAATGACAGAGTCTGGGAGCCCTAGTTCTCCTCCTAAACCTGATGGTAAAAAGTGGTACAAGAGATGGTGGAGCATGTTACCAGTAGTTTGTGTGATAGGACTATTTCTGGTGTTCATATTCTTTGCGGGAAGGAAGGCTGCTAATTTAGCCACTCAGAGGGAGATTTTGAAGTCAATTCAAGAGTACTCTACTCCGAAATCACCTCCAGCTAAGGTTCGACAGGAAGAGAAGCCAGTTGAGAATCGGTCAGAGCTCGTGTTCTTTGTTGAAGAGCATGAAAGTTTCAAGTTGGAGGACCTGTTTGAAGCCACAGCAGACTTGAGAAACCAGAGTTTTTGCAGCAGCCTTTACAAGGTAATACTCAAGAACAATGCACTGTATGCAGTCAAAAGGCTGAAGAAGTTGCAGGTACCCTTTGAGGAGTTTGGCCAAGCAATGAATCAGATAGGGAACAGAAAGCATCCCAACATTCTGCCTCTTGTTGGTTACAATTCTACCAACGACGAAAAGCTTGTGATATATAAGTATCAAAACAATGGGAGTCTGCTAAACCTGCTTCAGGACTACACAGAAGGCAAGAGGGATTTCCCATGGAGGGTGCGGCTGTCCATAGCACACGGAATTGCAAGGGGCTTAGATTTCATATACCAGAGGTCTGATGAGTGCATCCCTCATGGGAACCTAAAGCTTTCGAACATCCTTCTTGATGAAAAGGATGAACCACTGATCAGTGAGTATGGAATTTCAAAGTTCTTTGACCCCCTGAAAGGATGTGTCATCGTCTCCAATGGTTATACAGCCCCGGAGAAAGATTTATCTGAGAAAGGCGATGTTTATAGTTTTGGAGTGATTCTTCTTGAGTTACTGACTGGCAAAACTGTAGAAACAAGTGGGATGGACCTTCCTAAGTGGGTTACTGCCATGGTTAAGGAGGAGTGGACTGGTGAAGTCTTTGACAAGGAGGTTGCTAAAGCTGCAAAAGAGTGGGCATTTCCTTTGCTCAACATTGCTCTCAAGTGTGTATCAGCATTGCCACAAAATCGGCCGAGTGTAGCAGAAATTTATAAGAAGATTGAAGAGGTTATGCAGGATAATTTGAATACATCAGATTGTACTGTTGAGTGTGGAACCGATGAAGACAACTTTTGTATGCTTCACTCCATCATCCCTGAGACCTGGGATACTCCTGGATCAAATTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

600

Amino Acids

68.15

Weight (kDa)

8.06

Isoelectric Point (pI)

39.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 100 - 159 1.2e-06 Leucine rich repeat
Pkinase PF00069 315 - 556 9.5e-23 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 323 - 557 1.4e-22 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014696)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g23970
malus_domestica MD03G1189100.v1.1 MD11G1205400.v1.1
prunus_persica Prupe.4G232000_v2.0.a1
pyrus_communis pycom11g17810
rosa_chinensis RchiOBHm_Chr5g0042511
rosa_laevigata RLG00000034134
rosa_multiflora Rmu_co8185866.1_g000001 Rmu_sc0009319.1_g000001 Rmu_sc0041109.1_g000002
rosa_roxburghii Rroxscaffold_1G00038130
rosa_rugosa Rorug05G0201200
rosa_samantha Rh5AG287100 Rh5BG291500 Rh5CG323800 Rh5DG301300
rosa_wichuraiana Rw5G026660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1665
Acc36I ACCTGC 2 cut(s) 997, 1161
Acc65I GGTACC 1 cut(s) 1009
AccB1I GGYRCC 1 cut(s) 1009
AciI CCGC 5 cut(s) 74, 331, 595, 725, 1201
AclWI GGATC 3 cut(s) 131, 396, 1798
AcoI YGGCCR 3 cut(s) 160, 1027, 1643
AcsI RAATTY 3 cut(s) 101, 1341, 1659
AcuI CTGAAG 3 cut(s) 461, 1016, 1142
AdeI CACNNNGTG 1 cut(s) 169
AfaI GTAC 6 cut(s) 268, 461, 656, 785, 1011, 1714
AfiI CCNNNNNNNGG 6 cut(s) 756, 952, 1082, 1159, 1195, 1367
AflIII ACRYGT 1 cut(s) 145
AjnI CCWGG 2 cut(s) 1775, 1786
AloI GAACNNNNNNTCC 2 cut(s) 607, 639
AluBI AGCT 9 cut(s) 131, 187, 295, 318, 809, 853, 1111, 1288, 1574
AluI AGCT 9 cut(s) 131, 187, 295, 318, 809, 853, 1111, 1288, 1574
Alw21I GWGCWC 2 cut(s) 366, 855
Alw26I GTCTC 2 cut(s) 1387, 1766
Alw44I GTGCAC 1 cut(s) 362
AlwI GGATC 3 cut(s) 131, 396, 1798
AlwNI CAGNNNCTG 1 cut(s) 611
Ama87I CYCGRG 1 cut(s) 215
AoxI GGCC 4 cut(s) 37, 160, 1027, 1643
ApaLI GTGCAC 1 cut(s) 362
ApeKI GCWGC 4 cut(s) 737, 939, 942, 1574
ApoI RAATTY 3 cut(s) 101, 1341, 1659
Asp700I GAANNNNTTC 1 cut(s) 346
Asp718I GGTACC 1 cut(s) 1009
AspS9I GGNCC 3 cut(s) 37, 895, 1498
AsuC2I CCSGG 1 cut(s) 1403
AsuHPI GGTGA 3 cut(s) 101, 792, 1556
AsuII TTCGAA 1 cut(s) 1292
AvaI CYCGRG 1 cut(s) 215
AvaII GGWCC 2 cut(s) 895, 1498
AxyI CCTNAGG 1 cut(s) 423
BaeGI GKGCMC 1 cut(s) 366
BaeI ACNNNNGTAYC 2 cut(s) 428, 461
BalI TGGCCA 2 cut(s) 162, 1029
BanI GGYRCC 1 cut(s) 1009
BanII GRGCYC 2 cut(s) 620, 855
BauI CACGAG 1 cut(s) 854
BbsI GAAGAC 1 cut(s) 1743
Bbv12I GWGCWC 2 cut(s) 366, 855
BbvCI CCTCAGC 1 cut(s) 116
BbvI GCAGC 4 cut(s) 724, 951, 954, 1561
BccI CCATC 4 cut(s) 635, 657, 1489, 1769
BciT130I CCWGG 2 cut(s) 1777, 1788
BciVI GTATCC 1 cut(s) 1774
BclI TGATCA 1 cut(s) 1326
BcnI CCSGG 1 cut(s) 1403
BcoDI GTCTC 2 cut(s) 1387, 1766
BfaI CTAG 3 cut(s) 377, 483, 621
BfmI CTRYAG 1 cut(s) 1479
BfuAI ACCTGC 2 cut(s) 997, 1161
BfuI GTATCC 1 cut(s) 1774
BisI GCNGC 5 cut(s) 738, 940, 943, 1202, 1575
BlpI GCTNAGC 1 cut(s) 319
BlsI GCNGC 5 cut(s) 739, 941, 944, 1203, 1576
BmcAI AGTACT 1 cut(s) 785
Bme1390I CCNGG 3 cut(s) 1403, 1777, 1788
Bme18I GGWCC 2 cut(s) 895, 1498
BmeT110I CYCGRG 1 cut(s) 215
BmgT120I GGNCC 3 cut(s) 37, 895, 1498
BmiI GGNNCC 5 cut(s) 14, 617, 1011, 1280, 1729
BmrFI CCNGG 3 cut(s) 1403, 1777, 1788
BmsI GCATC 6 cut(s) 265, 342, 550, 595, 1069, 1275
BpiI GAAGAC 1 cut(s) 1743
BpmI CTGGAG 1 cut(s) 789
Bpu10I CCTNAGC 2 cut(s) 116, 810
Bpu1102I GCTNAGC 1 cut(s) 319
Bpu14I TTCGAA 1 cut(s) 1292
BpuEI CTTGAG 6 cut(s) 17, 173, 940, 947, 1478, 1598
BpuMI CCSGG 1 cut(s) 1403
BsaI GGTCTC 1 cut(s) 1766
BsaJI CCNNGG 7 cut(s) 216, 337, 564, 1190, 1401, 1521, 1776
BsaXI ACNNNNNCTCC 4 cut(s) 607, 637, 884, 914
Bsc4I CCNNNNNNNGG 6 cut(s) 756, 952, 1082, 1159, 1195, 1367
Bse1I ACTGG 4 cut(s) 680, 833, 1474, 1546
Bse21I CCTNAGG 1 cut(s) 423
Bse3DI GCAATG 4 cut(s) 110, 1041, 1605, 1628
BseBI CCWGG 2 cut(s) 1777, 1788
BseDI CCNNGG 7 cut(s) 216, 337, 564, 1190, 1401, 1521, 1776
BseLI CCNNNNNNNGG 6 cut(s) 756, 952, 1082, 1159, 1195, 1367
BseMI GCAATG 4 cut(s) 110, 1041, 1605, 1628
BseMII CTCAG 5 cut(s) 107, 398, 767, 1410, 1761
BseNI ACTGG 4 cut(s) 680, 833, 1474, 1546
BseRI GAGGAG 3 cut(s) 618, 1034, 1547
BseSI GKGCMC 1 cut(s) 366
BseX3I CGGCCG 1 cut(s) 1643
BseXI GCAGC 4 cut(s) 724, 951, 954, 1561
BseYI CCCAGC 1 cut(s) 581
BsgI GTGCAG 2 cut(s) 52, 352
Bsh1285I CGRYCG 1 cut(s) 1646
BshFI GGCC 4 cut(s) 39, 162, 1029, 1645
BshNI GGYRCC 1 cut(s) 1009
BsiEI CGRYCG 1 cut(s) 1646
BsiHKAI GWGCWC 2 cut(s) 366, 855
BsiHKCI CYCGRG 1 cut(s) 215
BsiSI CCGG 1 cut(s) 1403
BslFI GGGAC 1 cut(s) 500
BslI CCNNNNNNNGG 6 cut(s) 756, 952, 1082, 1159, 1195, 1367
BsmAI GTCTC 2 cut(s) 1387, 1766
BsmBI CGTCTC 1 cut(s) 1387
BsmFI GGGAC 1 cut(s) 500
BsmI GAATGC 1 cut(s) 212
BsnI GGCC 4 cut(s) 39, 162, 1029, 1645
Bso31I GGTCTC 1 cut(s) 1766
BsoBI CYCGRG 1 cut(s) 215
Bsp119I TTCGAA 1 cut(s) 1292
Bsp1286I GDGCHC 3 cut(s) 366, 620, 855
Bsp1407I TGTACA 1 cut(s) 459
Bsp143I GATC 4 cut(s) 136, 388, 1326, 1790
Bsp1720I GCTNAGC 1 cut(s) 319
Bsp19I CCATGG 3 cut(s) 564, 1190, 1521
BspACI CCGC 5 cut(s) 74, 331, 595, 725, 1201
BspANI GGCC 4 cut(s) 39, 162, 1029, 1645
BspCNI CTCAG 5 cut(s) 108, 399, 766, 1411, 1762
BspLI GGNNCC 5 cut(s) 14, 617, 1011, 1280, 1729
BspMI ACCTGC 2 cut(s) 997, 1161
BspPI GGATC 3 cut(s) 131, 396, 1798
BspQI GCTCTTC 1 cut(s) 864
BspT104I TTCGAA 1 cut(s) 1292
BspT107I GGYRCC 1 cut(s) 1009
BspTNI GGTCTC 1 cut(s) 1766
BsrDI GCAATG 4 cut(s) 110, 1041, 1605, 1628
BsrGI TGTACA 1 cut(s) 459
BsrI ACTGG 4 cut(s) 680, 833, 1474, 1546
BssECI CCNNGG 7 cut(s) 216, 337, 564, 1190, 1401, 1521, 1776
BssMI GATC 4 cut(s) 136, 388, 1326, 1790
BssSI CACGAG 1 cut(s) 854
BssT1I CCWWGG 3 cut(s) 564, 1190, 1521
Bst2BI CACGAG 1 cut(s) 854
Bst2UI CCWGG 2 cut(s) 1777, 1788
Bst4CI ACNGT 3 cut(s) 978, 1480, 1717
Bst6I CTCTTC 3 cut(s) 819, 864, 1671
BstAPI GCANNNNNTGC 2 cut(s) 592, 980
BstAUI TGTACA 1 cut(s) 459
BstBI TTCGAA 1 cut(s) 1292
BstC8I GCNNGC 2 cut(s) 185, 293
BstDSI CCRYGG 3 cut(s) 564, 1190, 1521
BstENI CCTNNNNNAGG 2 cut(s) 950, 1157
BstKTI GATC 4 cut(s) 139, 391, 1329, 1793
BstMAI GTCTC 2 cut(s) 1387, 1766
BstMBI GATC 4 cut(s) 136, 388, 1326, 1790
BstMCI CGRYCG 1 cut(s) 1646
BstMWI GCNNNNNNNGC 5 cut(s) 592, 746, 980, 1153, 1574
BstNI CCWGG 2 cut(s) 1777, 1788
BstNSI RCATGY 2 cut(s) 149, 676
BstSCI CCNGG 3 cut(s) 1401, 1775, 1786
BstSFI CTRYAG 1 cut(s) 1479
BstSLI GKGCMC 1 cut(s) 366
BstV1I GCAGC 4 cut(s) 724, 951, 954, 1561
BstV2I GAAGAC 1 cut(s) 1743
BstX2I RGATCY 1 cut(s) 388
BstYI RGATCY 1 cut(s) 388
BstZI CGGCCG 1 cut(s) 1643
Bsu36I CCTNAGG 1 cut(s) 423
BsuI GTATCC 1 cut(s) 1774
BsuRI GGCC 4 cut(s) 39, 162, 1029, 1645
BtgI CCRYGG 3 cut(s) 564, 1190, 1521
BtgZI GCGATG 2 cut(s) 448, 1443
BtsI GCAGTG 2 cut(s) 69, 364
BtsIMutI CAGTG 5 cut(s) 69, 364, 974, 1322, 1336
BveI ACCTGC 2 cut(s) 997, 1161
Cac8I GCNNGC 2 cut(s) 185, 293
CaiI CAGNNNCTG 1 cut(s) 611
Cfr13I GGNCC 3 cut(s) 37, 895, 1498
Csp6I GTAC 6 cut(s) 267, 460, 655, 784, 1010, 1713
CviAII CATG 7 cut(s) 146, 565, 673, 875, 1191, 1274, 1522
CviQI GTAC 6 cut(s) 267, 460, 655, 784, 1010, 1713
DpnI GATC 4 cut(s) 138, 390, 1328, 1792
DpnII GATC 4 cut(s) 136, 388, 1326, 1790
DraIII CACNNNGTG 1 cut(s) 169
EaeI YGGCCR 3 cut(s) 160, 1027, 1643
EagI CGGCCG 1 cut(s) 1643
Eam1104I CTCTTC 3 cut(s) 819, 864, 1671
EarI CTCTTC 3 cut(s) 819, 864, 1671
Ecl136II GAGCTC 1 cut(s) 853
EclXI CGGCCG 1 cut(s) 1643
Eco130I CCWWGG 3 cut(s) 564, 1190, 1521
Eco24I GRGCYC 2 cut(s) 620, 855
Eco31I GGTCTC 1 cut(s) 1766
Eco47I GGWCC 2 cut(s) 895, 1498
Eco52I CGGCCG 1 cut(s) 1643
Eco53kI GAGCTC 1 cut(s) 853
Eco57I CTGAAG 3 cut(s) 461, 1016, 1142
Eco81I CCTNAGG 1 cut(s) 423
Eco88I CYCGRG 1 cut(s) 215
EcoICRI GAGCTC 1 cut(s) 853
EcoNI CCTNNNNNAGG 2 cut(s) 950, 1157
EcoO109I RGGNCCY 2 cut(s) 37, 895
EcoRII CCWGG 2 cut(s) 1775, 1786
EcoT14I CCWWGG 3 cut(s) 564, 1190, 1521
EcoT38I GRGCYC 2 cut(s) 620, 855
ErhI CCWWGG 3 cut(s) 564, 1190, 1521
Esp3I CGTCTC 1 cut(s) 1387
FaeI CATG 7 cut(s) 149, 568, 676, 878, 1194, 1277, 1525
FaqI GGGAC 1 cut(s) 500
FatI CATG 7 cut(s) 145, 564, 672, 874, 1190, 1273, 1521
FauI CCCGC 1 cut(s) 718
FbaI TGATCA 1 cut(s) 1326
Fnu4HI GCNGC 5 cut(s) 738, 940, 943, 1202, 1575
FriOI GRGCYC 2 cut(s) 620, 855
Fsp4HI GCNGC 5 cut(s) 738, 940, 943, 1202, 1575
FspBI CTAG 3 cut(s) 377, 483, 621
GluI GCNGC 5 cut(s) 738, 940, 943, 1202, 1575
GsaI CCCAGC 1 cut(s) 585
GsuI CTGGAG 1 cut(s) 789
HaeIII GGCC 4 cut(s) 39, 162, 1029, 1645
HapII CCGG 1 cut(s) 1403
Hin1II CATG 7 cut(s) 149, 568, 676, 878, 1194, 1277, 1525
HindIII AAGCTT 2 cut(s) 1109, 1286
HpaII CCGG 1 cut(s) 1403
HphI GGTGA 3 cut(s) 101, 792, 1556
Hpy166II GTNNAC 3 cut(s) 269, 364, 1539
Hpy188III TCNNGA 8 cut(s) 140, 298, 501, 779, 964, 1160, 1304, 1457
Hpy8I GTNNAC 3 cut(s) 269, 364, 1539
Hpy99I CGWCG 1 cut(s) 1106
HpyAV CCTTC 6 cut(s) 73, 723, 727, 1166, 1310, 1511
HpyCH4III ACNGT 3 cut(s) 978, 1480, 1717
HpyF10VI GCNNNNNNNGC 5 cut(s) 592, 746, 980, 1153, 1574
Hsp92II CATG 7 cut(s) 149, 568, 676, 878, 1194, 1277, 1525
KpnI GGTACC 1 cut(s) 1013
Ksp22I TGATCA 1 cut(s) 1326
Kzo9I GATC 4 cut(s) 136, 388, 1326, 1790
LguI GCTCTTC 1 cut(s) 864
LmnI GCTCC 4 cut(s) 12, 300, 615, 669
Lsp1109I GCAGC 4 cut(s) 724, 951, 954, 1561
LweI GCATC 6 cut(s) 265, 342, 550, 595, 1069, 1275
MaeI CTAG 3 cut(s) 377, 483, 621
MaeIII GTNAC 4 cut(s) 675, 1085, 1461, 1513
MalI GATC 4 cut(s) 138, 390, 1328, 1792
MboI GATC 4 cut(s) 136, 388, 1326, 1790
MboII GAAGA 9 cut(s) 16, 395, 836, 881, 1009, 1445, 1681, 1688, 1748
MflI RGATCY 1 cut(s) 388
MhlI GDGCHC 3 cut(s) 366, 620, 855
MlsI TGGCCA 2 cut(s) 162, 1029
MluNI TGGCCA 2 cut(s) 162, 1029
MlyI GAGTC 4 cut(s) 63, 101, 617, 1150
MmeI TCCRAC 1 cut(s) 870
Mox20I TGGCCA 2 cut(s) 162, 1029
MroXI GAANNNNTTC 1 cut(s) 346
MscI TGGCCA 2 cut(s) 162, 1029
MseI TTAA 1 cut(s) 1527
MslI CAYNNNNRTG 1 cut(s) 261
Msp20I TGGCCA 2 cut(s) 162, 1029
MspI CCGG 1 cut(s) 1403
MspR9I CCNGG 3 cut(s) 1403, 1777, 1788
Mva1269I GAATGC 1 cut(s) 212
MvaI CCWGG 2 cut(s) 1777, 1788
MwoI GCNNNNNNNGC 5 cut(s) 592, 746, 980, 1153, 1574
NciI CCSGG 1 cut(s) 1403
NcoI CCATGG 3 cut(s) 564, 1190, 1521
NdeII GATC 4 cut(s) 136, 388, 1326, 1790
NlaIII CATG 7 cut(s) 149, 568, 676, 878, 1194, 1277, 1525
NlaIV GGNNCC 5 cut(s) 14, 617, 1011, 1280, 1729
NmeAIII GCCGAG 1 cut(s) 1671
NspI RCATGY 2 cut(s) 149, 676
NspV TTCGAA 1 cut(s) 1292
PciI ACATGT 1 cut(s) 145
PciSI GCTCTTC 1 cut(s) 864
PctI GAATGC 1 cut(s) 212
PdmI GAANNNNTTC 1 cut(s) 346
PfeI GAWTC 7 cut(s) 107, 281, 301, 536, 841, 1039, 1450
PflFI GACNNNGTC 1 cut(s) 607
PfoI TCCNGGA 1 cut(s) 1786
PkrI GCNGC 5 cut(s) 739, 941, 944, 1203, 1576
PleI GAGTC 4 cut(s) 62, 100, 616, 1149
PpsI GAGTC 4 cut(s) 62, 100, 616, 1149
PpuMI RGGWCCY 1 cut(s) 895
PscI ACATGT 1 cut(s) 145
PsiI TTATAA 1 cut(s) 1665
Psp124BI GAGCTC 1 cut(s) 855
Psp5II RGGWCCY 1 cut(s) 895
Psp6I CCWGG 2 cut(s) 1775, 1786
PspFI CCCAGC 1 cut(s) 581
PspGI CCWGG 2 cut(s) 1775, 1786
PspN4I GGNNCC 5 cut(s) 14, 617, 1011, 1280, 1729
PspPI GGNCC 3 cut(s) 37, 895, 1498
PspPPI RGGWCCY 1 cut(s) 895
PstNI CAGNNNCTG 1 cut(s) 611
PsuI RGATCY 1 cut(s) 388
PsyI GACNNNGTC 1 cut(s) 607
RsaI GTAC 6 cut(s) 268, 461, 656, 785, 1011, 1714
RsaNI GTAC 6 cut(s) 267, 460, 655, 784, 1010, 1713
RseI CAYNNNNRTG 1 cut(s) 261
SacI GAGCTC 1 cut(s) 855
SapI GCTCTTC 1 cut(s) 864
SaqAI TTAA 1 cut(s) 1527
SatI GCNGC 5 cut(s) 738, 940, 943, 1202, 1575
Sau3AI GATC 4 cut(s) 136, 388, 1326, 1790
Sau96I GGNCC 3 cut(s) 37, 895, 1498
ScaI AGTACT 1 cut(s) 785
SchI GAGTC 4 cut(s) 63, 101, 617, 1150
ScrFI CCNGG 3 cut(s) 1403, 1777, 1788
SduI GDGCHC 3 cut(s) 366, 620, 855
SfaNI GCATC 6 cut(s) 265, 342, 550, 595, 1069, 1275
SfcI CTRYAG 1 cut(s) 1479
SfuI TTCGAA 1 cut(s) 1292
SinI GGWCC 2 cut(s) 895, 1498
SmiMI CAYNNNNRTG 1 cut(s) 261
SmlI CTYRAG 6 cut(s) 32, 188, 919, 962, 1457, 1613
SmoI CTYRAG 6 cut(s) 32, 188, 919, 962, 1457, 1613
SsiI CCGC 5 cut(s) 74, 331, 595, 725, 1201
SspI AATATT 1 cut(s) 45
SspMI CTAG 3 cut(s) 377, 483, 621
SstI GAGCTC 1 cut(s) 855
StyD4I CCNGG 3 cut(s) 1401, 1775, 1786
StyI CCWWGG 3 cut(s) 564, 1190, 1521
TaaI ACNGT 3 cut(s) 978, 1480, 1717
TaqI TCGA 3 cut(s) 500, 817, 1292
TaqII GACCGA 1 cut(s) 834
TatI WGTACW 3 cut(s) 459, 783, 1712
TauI GCSGC 1 cut(s) 1204
TfiI GAWTC 7 cut(s) 107, 281, 301, 536, 841, 1039, 1450
Tru1I TTAA 1 cut(s) 1527
Tru9I TTAA 1 cut(s) 1527
TscAI CASTG 5 cut(s) 76, 371, 981, 1329, 1336
TseI GCWGC 4 cut(s) 737, 939, 942, 1574
TspGWI ACGGA 1 cut(s) 1233
TspRI CASTG 5 cut(s) 76, 371, 981, 1329, 1336
Tth111I GACNNNGTC 1 cut(s) 607
VneI GTGCAC 1 cut(s) 362
VpaK11BI GGWCC 2 cut(s) 895, 1498
XagI CCTNNNNNAGG 2 cut(s) 950, 1157
XapI RAATTY 3 cut(s) 101, 1341, 1659
XceI RCATGY 2 cut(s) 149, 676
XmnI GAANNNNTTC 1 cut(s) 346
XspI CTAG 3 cut(s) 377, 483, 621
ZrmI AGTACT 1 cut(s) 785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.