Rh5DG364100

Saccharopine dehydrogenase NADP binding domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
54529271 .. 54534939
5669 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG364100.1

Sequence Viewer

Length: 1095 bp
ATGGCGGGAGCTTCACTGTCATCACTGCATTTGAAGAGCGCCGCTATCAGAATCAGGACAAGTACTACAATTGTTAATGTGGCCAGTGCTACGGAGACCCAAACCAGTACTCGGGTCCAACTCCCCCAGAAGACCCGGAATTCCAGGGTGTTAGTGCTCGGTGGAACCGGTCGGGTCGGAGGATCCACTTCTATTGCCCTCTCCAACCTCTGCCCCGACCTCCAAATTATCGTTGCCGGCCGGAACAGGGAGAAAGGCGCTGAAATGCTGACTACTCTTGGGGCGAACTCGGAGTTCTGTGAAGTCGATATTAACAATGAAAAATCATTGGAAGCAGCTCTGGAAGATGCGGATCTTGTAGTTCATGCTGCTGGCCCATTCCAACAGGCAGAGAAGTGCACTGTATTGGAAGCTGCCTTAAAGACCAAGACAGCCTATGTTGATGTTTGTGATGATACAGCCTATGCATTCCGTGCAAAATCTTTCCACGATAGAGCAGTTGCAGCTAATGTTCCAGCCATAACAACTGGTGGAATATATCCAGGAGTGAGCAATGTGATGGCTGCAGAACTAGTTCGTGTCGCAAGAAGTGAAAACAAAGGAAAACCAGAAAGGCTAAGGTTCTTCTACTACACAGCAGGTACTGGTGGGGCTGGTCCAACCATCTTAGCTACTAGTTTTTTGCTTCTTGGAGAGGAGGTTGTTGCATTTAATAAAGGAGAAAAGATCAAACTAAGGCCATATAGTGGAATGCTGAAGATTGACTTTGGAAAAGGCATTGGAAAGAAAGATGTTTATCTATTGAATTTGCCAGAGGTAAGAAGTACTCACGAGGTCCTAGGAGTACCTACTGTCAGTGCCCGGTTTGGAACTGCCCCCTTCTTTTGGAATTGGGCAATGGAAGCCATGACTATTCTTCCTGCAGAGTTGTTGAGAGACAGAAGCAAAGTCCAACAGATGGTTCAAATGTTTGACCCTGTAGTCAGAGCAGTTGATGAGATTGCTGGAGAGCGTGTATCAATGCGGGTTGATTTGGACTGTTCTGGCGGCCGCAATACAGTAAGTGTATTCAGTCACAAGAGGCTTTCTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

364

Amino Acids

39.23

Weight (kDa)

9.02

Isoelectric Point (pI)

28.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NmrA PF05368 47 - 127 9.2e-06 NmrA-like family
Sacchrp_dh_NADP PF03435 50 - 171 1.3e-17 Saccharopine dehydrogenase NADP binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 980
Acc36I ACCTGC 1 cut(s) 629
AccB7I CCANNNNNTGG 2 cut(s) 746, 958
AciI CCGC 6 cut(s) 5, 42, 350, 1024, 1047, 1051
AclWI GGATC 3 cut(s) 177, 190, 360
AcoI YGGCCR 3 cut(s) 81, 238, 1048
AcsI RAATTY 2 cut(s) 139, 805
AcuI CTGAAG 1 cut(s) 776
AfaI GTAC 5 cut(s) 64, 109, 643, 826, 846
AfiI CCNNNNNNNGG 5 cut(s) 111, 247, 746, 885, 958
AgeI ACCGGT 1 cut(s) 167
AgsI TTSAA 3 cut(s) 34, 805, 965
AhlI ACTAGT 2 cut(s) 571, 674
AjnI CCWGG 2 cut(s) 143, 541
AjuI GAANNNNNNNTTGG 2 cut(s) 945, 977
AluBI AGCT 5 cut(s) 11, 338, 413, 506, 671
AluI AGCT 5 cut(s) 11, 338, 413, 506, 671
Alw21I GWGCWC 2 cut(s) 159, 401
Alw26I GTCTC 2 cut(s) 89, 930
Alw44I GTGCAC 1 cut(s) 397
AlwI GGATC 3 cut(s) 177, 190, 360
AlwNI CAGNNNCTG 1 cut(s) 644
Ama87I CYCGRG 1 cut(s) 111
AoxI GGCC 5 cut(s) 81, 238, 373, 737, 1048
ApaLI GTGCAC 1 cut(s) 397
ApeKI GCWGC 5 cut(s) 335, 368, 413, 503, 563
ApoI RAATTY 2 cut(s) 139, 805
AsiGI ACCGGT 1 cut(s) 167
Asp700I GAANNNNTTC 1 cut(s) 573
AspA2I CCTAGG 1 cut(s) 838
AspLEI GCGC 2 cut(s) 41, 260
AspS9I GGNCC 4 cut(s) 115, 374, 656, 835
AsuC2I CCSGG 2 cut(s) 136, 862
AvaI CYCGRG 1 cut(s) 111
AvaII GGWCC 3 cut(s) 115, 656, 835
AvrII CCTAGG 1 cut(s) 838
BaeGI GKGCMC 2 cut(s) 401, 862
BalI TGGCCA 1 cut(s) 83
BamHI GGATCC 1 cut(s) 182
BauI CACGAG 1 cut(s) 830
BbsI GAAGAC 1 cut(s) 137
Bbv12I GWGCWC 2 cut(s) 159, 401
BbvI GCAGC 5 cut(s) 347, 355, 400, 515, 550
BccI CCATC 3 cut(s) 553, 671, 952
BciT130I CCWGG 2 cut(s) 145, 543
BcnI CCSGG 2 cut(s) 136, 862
BcoDI GTCTC 2 cut(s) 89, 930
BcuI ACTAGT 2 cut(s) 571, 674
BfaI CTAG 3 cut(s) 572, 675, 839
BfmI CTRYAG 3 cut(s) 564, 921, 978
BfoI RGCGCY 2 cut(s) 42, 261
BfuAI ACCTGC 1 cut(s) 629
BisI GCNGC 8 cut(s) 42, 336, 369, 414, 504, 564, 1048, 1051
BlnI CCTAGG 1 cut(s) 838
BlsI GCNGC 8 cut(s) 43, 337, 370, 415, 505, 565, 1049, 1052
BmcAI AGTACT 3 cut(s) 64, 109, 826
Bme1390I CCNGG 4 cut(s) 136, 145, 543, 862
Bme18I GGWCC 3 cut(s) 115, 656, 835
BmeT110I CYCGRG 1 cut(s) 111
BmgT120I GGNCC 4 cut(s) 115, 374, 656, 835
BmiI GGNNCC 3 cut(s) 116, 166, 184
BmrFI CCNGG 4 cut(s) 136, 145, 543, 862
BmsI GCATC 1 cut(s) 337
BpiI GAAGAC 1 cut(s) 137
BpmI CTGGAG 1 cut(s) 1026
Bpu10I CCTNAGC 1 cut(s) 617
BpuMI CCSGG 2 cut(s) 136, 862
BsaBI GATNNNNATC 2 cut(s) 351, 795
BsaI GGTCTC 1 cut(s) 89
BsaJI CCNNGG 2 cut(s) 144, 838
BsaWI WCCGGW 1 cut(s) 167
BsaXI ACNNNNNCTCC 4 cut(s) 684, 714, 999, 1029
Bsc4I CCNNNNNNNGG 5 cut(s) 111, 247, 746, 885, 958
Bse118I RCCGGY 2 cut(s) 167, 236
Bse1I ACTGG 4 cut(s) 84, 105, 532, 649
Bse3DI GCAATG 2 cut(s) 559, 903
Bse8I GATNNNNATC 2 cut(s) 351, 795
BseBI CCWGG 2 cut(s) 145, 543
BseDI CCNNGG 2 cut(s) 144, 838
BseJI GATNNNNATC 2 cut(s) 351, 795
BseLI CCNNNNNNNGG 5 cut(s) 111, 247, 746, 885, 958
BseMI GCAATG 2 cut(s) 559, 903
BseNI ACTGG 4 cut(s) 84, 105, 532, 649
BseRI GAGGAG 1 cut(s) 710
BseSI GKGCMC 2 cut(s) 401, 862
BseX3I CGGCCG 2 cut(s) 238, 1048
BseXI GCAGC 5 cut(s) 347, 355, 400, 515, 550
Bsh1285I CGRYCG 3 cut(s) 172, 241, 1051
BshFI GGCC 5 cut(s) 83, 240, 375, 739, 1050
BshTI ACCGGT 1 cut(s) 167
BsiEI CGRYCG 3 cut(s) 172, 241, 1051
BsiHKAI GWGCWC 2 cut(s) 159, 401
BsiHKCI CYCGRG 1 cut(s) 111
BsiSI CCGG 5 cut(s) 136, 168, 237, 241, 862
BslI CCNNNNNNNGG 5 cut(s) 111, 247, 746, 885, 958
BsmAI GTCTC 2 cut(s) 89, 930
BsmI GAATGC 2 cut(s) 467, 756
BsnI GGCC 5 cut(s) 83, 240, 375, 739, 1050
Bso31I GGTCTC 1 cut(s) 89
BsoBI CYCGRG 1 cut(s) 111
Bsp1286I GDGCHC 3 cut(s) 159, 401, 862
Bsp143I GATC 3 cut(s) 182, 352, 726
BspACI CCGC 6 cut(s) 5, 42, 350, 1024, 1047, 1051
BspANI GGCC 5 cut(s) 83, 240, 375, 739, 1050
BspLI GGNNCC 3 cut(s) 116, 166, 184
BspMAI CTGCAG 2 cut(s) 568, 925
BspMI ACCTGC 1 cut(s) 629
BspPI GGATC 3 cut(s) 177, 190, 360
BspQI GCTCTTC 1 cut(s) 29
BspTNI GGTCTC 1 cut(s) 89
BsrDI GCAATG 2 cut(s) 559, 903
BsrFI RCCGGY 2 cut(s) 167, 236
BsrI ACTGG 4 cut(s) 84, 105, 532, 649
BssAI RCCGGY 2 cut(s) 167, 236
BssECI CCNNGG 2 cut(s) 144, 838
BssMI GATC 3 cut(s) 182, 352, 726
BssSI CACGAG 1 cut(s) 830
BssT1I CCWWGG 1 cut(s) 838
Bst2BI CACGAG 1 cut(s) 830
Bst2UI CCWGG 2 cut(s) 145, 543
Bst4CI ACNGT 5 cut(s) 18, 403, 853, 1040, 1060
Bst6I CTCTTC 1 cut(s) 29
BstAPI GCANNNNNTGC 1 cut(s) 473
BstC8I GCNNGC 2 cut(s) 238, 373
BstDEI CTNAG 3 cut(s) 617, 667, 734
BstH2I RGCGCY 2 cut(s) 42, 261
BstHHI GCGC 2 cut(s) 41, 260
BstKTI GATC 3 cut(s) 185, 355, 729
BstMAI GTCTC 2 cut(s) 89, 930
BstMBI GATC 3 cut(s) 182, 352, 726
BstMCI CGRYCG 3 cut(s) 172, 241, 1051
BstMWI GCNNNNNNNGC 3 cut(s) 473, 503, 902
BstNI CCWGG 2 cut(s) 145, 543
BstSCI CCNGG 4 cut(s) 134, 143, 541, 860
BstSFI CTRYAG 3 cut(s) 564, 921, 978
BstSLI GKGCMC 2 cut(s) 401, 862
BstV1I GCAGC 5 cut(s) 347, 355, 400, 515, 550
BstV2I GAAGAC 1 cut(s) 137
BstX2I RGATCY 2 cut(s) 182, 352
BstYI RGATCY 2 cut(s) 182, 352
BstZI CGGCCG 2 cut(s) 238, 1048
BsuRI GGCC 5 cut(s) 83, 240, 375, 739, 1050
BtsI GCAGTG 1 cut(s) 23
BtsIMutI CAGTG 5 cut(s) 14, 23, 91, 399, 862
BveI ACCTGC 1 cut(s) 629
Cac8I GCNNGC 2 cut(s) 238, 373
CaiI CAGNNNCTG 1 cut(s) 644
CciNI GCGGCCGC 1 cut(s) 1048
CfoI GCGC 2 cut(s) 41, 260
Cfr10I RCCGGY 2 cut(s) 167, 236
Cfr13I GGNCC 4 cut(s) 115, 374, 656, 835
Csp6I GTAC 5 cut(s) 63, 108, 642, 825, 845
CspAI ACCGGT 1 cut(s) 167
CspCI CAANNNNNGTGG 2 cut(s) 175, 210
CviAII CATG 2 cut(s) 365, 907
CviQI GTAC 5 cut(s) 63, 108, 642, 825, 845
DdeI CTNAG 3 cut(s) 617, 667, 734
DpnI GATC 3 cut(s) 184, 354, 728
DpnII GATC 3 cut(s) 182, 352, 726
DrdI GACNNNNNNGTC 1 cut(s) 980
DseDI GACNNNNNNGTC 1 cut(s) 980
EaeI YGGCCR 3 cut(s) 81, 238, 1048
EagI CGGCCG 2 cut(s) 238, 1048
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
EclXI CGGCCG 2 cut(s) 238, 1048
Eco130I CCWWGG 1 cut(s) 838
Eco31I GGTCTC 1 cut(s) 89
Eco47I GGWCC 3 cut(s) 115, 656, 835
Eco52I CGGCCG 2 cut(s) 238, 1048
Eco57I CTGAAG 1 cut(s) 776
Eco88I CYCGRG 1 cut(s) 111
EcoO109I RGGNCCY 1 cut(s) 835
EcoRI GAATTC 1 cut(s) 139
EcoRII CCWGG 2 cut(s) 143, 541
EcoT14I CCWWGG 1 cut(s) 838
EcoT22I ATGCAT 1 cut(s) 469
ErhI CCWWGG 1 cut(s) 838
FaeI CATG 2 cut(s) 368, 910
FaiI YATR 8 cut(s) 366, 438, 465, 521, 538, 742, 744, 908
FalI AAGNNNNNCTT 2 cut(s) 749, 781
FatI CATG 2 cut(s) 364, 906
FauI CCCGC 1 cut(s) 1017
Fnu4HI GCNGC 8 cut(s) 42, 336, 369, 414, 504, 564, 1048, 1051
Fsp4HI GCNGC 8 cut(s) 42, 336, 369, 414, 504, 564, 1048, 1051
FspBI CTAG 3 cut(s) 572, 675, 839
GlaI GCGC 2 cut(s) 40, 259
GluI GCNGC 8 cut(s) 42, 336, 369, 414, 504, 564, 1048, 1051
GsuI CTGGAG 1 cut(s) 1026
HaeII RGCGCY 2 cut(s) 42, 261
HaeIII GGCC 5 cut(s) 83, 240, 375, 739, 1050
HapII CCGG 5 cut(s) 136, 168, 237, 241, 862
HhaI GCGC 2 cut(s) 41, 260
Hin1II CATG 2 cut(s) 368, 910
Hin6I GCGC 2 cut(s) 39, 258
HinP1I GCGC 2 cut(s) 39, 258
HinfI GANTC 1 cut(s) 51
HpaII CCGG 5 cut(s) 136, 168, 237, 241, 862
Hpy166II GTNNAC 1 cut(s) 399
Hpy188I TCNGA 4 cut(s) 50, 179, 292, 986
Hpy188III TCNNGA 3 cut(s) 55, 341, 830
Hpy8I GTNNAC 1 cut(s) 399
HpyAV CCTTC 1 cut(s) 889
HpyCH4III ACNGT 5 cut(s) 18, 403, 853, 1040, 1060
HpyCH4V TGCA 8 cut(s) 28, 399, 467, 476, 503, 566, 707, 923
HpyF10VI GCNNNNNNNGC 3 cut(s) 473, 503, 902
HpyF3I CTNAG 3 cut(s) 617, 667, 734
Hsp92II CATG 2 cut(s) 368, 910
HspAI GCGC 2 cut(s) 39, 258
KroI GCCGGC 1 cut(s) 236
KroNI GCCGGC 1 cut(s) 238
Kzo9I GATC 3 cut(s) 182, 352, 726
LguI GCTCTTC 1 cut(s) 29
LmnI GCTCC 1 cut(s) 8
Lsp1109I GCAGC 5 cut(s) 347, 355, 400, 515, 550
LweI GCATC 1 cut(s) 337
MaeI CTAG 3 cut(s) 572, 675, 839
MaeIII GTNAC 1 cut(s) 1073
MalI GATC 3 cut(s) 184, 354, 728
MboI GATC 3 cut(s) 182, 352, 726
MboII GAAGA 6 cut(s) 46, 142, 356, 616, 769, 908
MfeI CAATTG 1 cut(s) 69
MflI RGATCY 2 cut(s) 182, 352
MhlI GDGCHC 3 cut(s) 159, 401, 862
MlsI TGGCCA 1 cut(s) 83
MluCI AATT 5 cut(s) 69, 139, 225, 805, 889
MluNI TGGCCA 1 cut(s) 83
MmeI TCCRAC 6 cut(s) 142, 157, 228, 406, 683, 976
MnlI CCTC 9 cut(s) 173, 209, 218, 230, 688, 691, 808, 826, 1074
Mox20I TGGCCA 1 cut(s) 83
Mph1103I ATGCAT 1 cut(s) 469
MroNI GCCGGC 1 cut(s) 236
MroXI GAANNNNTTC 1 cut(s) 573
MscI TGGCCA 1 cut(s) 83
MseI TTAA 4 cut(s) 75, 312, 419, 711
Msp20I TGGCCA 1 cut(s) 83
MspI CCGG 5 cut(s) 136, 168, 237, 241, 862
MspR9I CCNGG 4 cut(s) 136, 145, 543, 862
MunI CAATTG 1 cut(s) 69
Mva1269I GAATGC 2 cut(s) 467, 756
MvaI CCWGG 2 cut(s) 145, 543
MwoI GCNNNNNNNGC 3 cut(s) 473, 503, 902
NaeI GCCGGC 1 cut(s) 238
NciI CCSGG 2 cut(s) 136, 862
NdeII GATC 3 cut(s) 182, 352, 726
NgoMIV GCCGGC 1 cut(s) 236
NlaIII CATG 2 cut(s) 368, 910
NlaIV GGNNCC 3 cut(s) 116, 166, 184
NmuCI GTSAC 1 cut(s) 1073
NotI GCGGCCGC 1 cut(s) 1048
NsiI ATGCAT 1 cut(s) 469
PciSI GCTCTTC 1 cut(s) 29
PctI GAATGC 2 cut(s) 467, 756
PdiI GCCGGC 1 cut(s) 238
PdmI GAANNNNTTC 1 cut(s) 573
PfeI GAWTC 1 cut(s) 51
PflMI CCANNNNNTGG 2 cut(s) 746, 958
PfoI TCCNGGA 1 cut(s) 541
PinAI ACCGGT 1 cut(s) 167
PkrI GCNGC 8 cut(s) 43, 337, 370, 415, 505, 565, 1049, 1052
PpuMI RGGWCCY 1 cut(s) 835
Psp5II RGGWCCY 1 cut(s) 835
Psp6I CCWGG 2 cut(s) 143, 541
PspGI CCWGG 2 cut(s) 143, 541
PspN4I GGNNCC 3 cut(s) 116, 166, 184
PspPI GGNCC 4 cut(s) 115, 374, 656, 835
PspPPI RGGWCCY 1 cut(s) 835
PstI CTGCAG 2 cut(s) 568, 925
PstNI CAGNNNCTG 1 cut(s) 644
PsuI RGATCY 2 cut(s) 182, 352
RsaI GTAC 5 cut(s) 64, 109, 643, 826, 846
RsaNI GTAC 5 cut(s) 63, 108, 642, 825, 845
SapI GCTCTTC 1 cut(s) 29
SaqAI TTAA 4 cut(s) 75, 312, 419, 711
SatI GCNGC 8 cut(s) 42, 336, 369, 414, 504, 564, 1048, 1051
Sau3AI GATC 3 cut(s) 182, 352, 726
Sau96I GGNCC 4 cut(s) 115, 374, 656, 835
ScaI AGTACT 3 cut(s) 64, 109, 826
ScrFI CCNGG 4 cut(s) 136, 145, 543, 862
SduI GDGCHC 3 cut(s) 159, 401, 862
SfaNI GCATC 1 cut(s) 337
SfcI CTRYAG 3 cut(s) 564, 921, 978
SinI GGWCC 3 cut(s) 115, 656, 835
SpeI ACTAGT 2 cut(s) 571, 674
Sse9I AATT 5 cut(s) 69, 139, 225, 805, 889
SsiI CCGC 6 cut(s) 5, 42, 350, 1024, 1047, 1051
SspMI CTAG 3 cut(s) 572, 675, 839
StyD4I CCNGG 4 cut(s) 134, 143, 541, 860
StyI CCWWGG 1 cut(s) 838
TaaI ACNGT 5 cut(s) 18, 403, 853, 1040, 1060
TaqI TCGA 1 cut(s) 306
TasI AATT 5 cut(s) 69, 139, 225, 805, 889
TatI WGTACW 3 cut(s) 62, 107, 824
TauI GCSGC 3 cut(s) 44, 1050, 1053
TfiI GAWTC 1 cut(s) 51
Tru1I TTAA 4 cut(s) 75, 312, 419, 711
Tru9I TTAA 4 cut(s) 75, 312, 419, 711
TscAI CASTG 5 cut(s) 21, 30, 91, 406, 862
TseFI GTSAC 1 cut(s) 1073
TseI GCWGC 5 cut(s) 335, 368, 413, 503, 563
Tsp45I GTSAC 1 cut(s) 1073
TspDTI ATGAA 2 cut(s) 333, 353
TspGWI ACGGA 2 cut(s) 107, 461
TspRI CASTG 5 cut(s) 21, 30, 91, 406, 862
Van91I CCANNNNNTGG 2 cut(s) 746, 958
VneI GTGCAC 1 cut(s) 397
VpaK11BI GGWCC 3 cut(s) 115, 656, 835
XapI RAATTY 2 cut(s) 139, 805
XmaJI CCTAGG 1 cut(s) 838
XmnI GAANNNNTTC 1 cut(s) 573
XspI CTAG 3 cut(s) 572, 675, 839
ZrmI AGTACT 3 cut(s) 64, 109, 826
Zsp2I ATGCAT 1 cut(s) 469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.