transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12870 |
| fragaria_vesca | FvH4_3g28890 |
| malus_domestica | MD03G1176000.v1.1 MD11G1196500.v1.1 |
| prunus_persica | Prupe.4G247800_v2.0.a1 |
| pyrus_communis | pycom03g13330 pycom11g16920 |
| rosa_chinensis | RchiOBHm_Chr5g0051961 |
| rosa_laevigata | RLG00000034850 |
| rosa_multiflora | Rmu_sc0005990.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00027530 Rroxscaffold_1G00027670 |
| rosa_rugosa | Rorug05G0276100 |
| rosa_samantha | Rh5AG348000 Rh5BG358700 Rh5CG384100 Rh5DG374100 |
| rosa_wichuraiana | Rw0G008290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 84 |
| AclWI | GGATC | 5 cut(s) | 53, 133, 264, 384, 420 |
| AfaI | GTAC | 1 cut(s) | 89 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 11, 12 |
| AflIII | ACRYGT | 1 cut(s) | 51 |
| AgsI | TTSAA | 3 cut(s) | 164, 176, 365 |
| AjnI | CCWGG | 1 cut(s) | 252 |
| AlwI | GGATC | 5 cut(s) | 53, 133, 264, 384, 420 |
| AsuHPI | GGTGA | 1 cut(s) | 344 |
| BbsI | GAAGAC | 1 cut(s) | 216 |
| BciT130I | CCWGG | 1 cut(s) | 254 |
| BclI | TGATCA | 1 cut(s) | 370 |
| BfaI | CTAG | 1 cut(s) | 230 |
| BfmI | CTRYAG | 1 cut(s) | 304 |
| Bme1390I | CCNGG | 1 cut(s) | 254 |
| BmrFI | CCNGG | 1 cut(s) | 254 |
| BpiI | GAAGAC | 1 cut(s) | 216 |
| BsaBI | GATNNNNATC | 2 cut(s) | 261, 375 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 11, 12 |
| Bse8I | GATNNNNATC | 2 cut(s) | 261, 375 |
| BseBI | CCWGG | 1 cut(s) | 254 |
| BseGI | GGATG | 1 cut(s) | 20 |
| BseJI | GATNNNNATC | 2 cut(s) | 261, 375 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 11, 12 |
| BsgI | GTGCAG | 1 cut(s) | 99 |
| BslFI | GGGAC | 1 cut(s) | 416 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 11, 12 |
| BsmFI | GGGAC | 1 cut(s) | 416 |
| Bsp143I | GATC | 8 cut(s) | 58, 120, 125, 256, 342, 370, 376, 412 |
| BspACI | CCGC | 1 cut(s) | 84 |
| BspPI | GGATC | 5 cut(s) | 53, 133, 264, 384, 420 |
| BssMI | GATC | 8 cut(s) | 58, 120, 125, 256, 342, 370, 376, 412 |
| Bst2UI | CCWGG | 1 cut(s) | 254 |
| Bst4CI | ACNGT | 2 cut(s) | 308, 314 |
| BstF5I | GGATG | 1 cut(s) | 20 |
| BstKTI | GATC | 8 cut(s) | 61, 123, 128, 259, 345, 373, 379, 415 |
| BstMBI | GATC | 8 cut(s) | 58, 120, 125, 256, 342, 370, 376, 412 |
| BstNI | CCWGG | 1 cut(s) | 254 |
| BstNSI | RCATGY | 1 cut(s) | 55 |
| BstSCI | CCNGG | 1 cut(s) | 252 |
| BstSFI | CTRYAG | 1 cut(s) | 304 |
| BstV2I | GAAGAC | 1 cut(s) | 216 |
| BstX2I | RGATCY | 1 cut(s) | 412 |
| BstYI | RGATCY | 1 cut(s) | 412 |
| BtsCI | GGATG | 1 cut(s) | 20 |
| BtsI | GCAGTG | 1 cut(s) | 111 |
| BtsIMutI | CAGTG | 2 cut(s) | 111, 246 |
| Csp6I | GTAC | 1 cut(s) | 88 |
| CviAII | CATG | 5 cut(s) | 25, 52, 80, 108, 340 |
| CviJI | RGCY | 1 cut(s) | 385 |
| CviKI_1 | RGCY | 1 cut(s) | 385 |
| CviQI | GTAC | 1 cut(s) | 88 |
| DpnI | GATC | 8 cut(s) | 60, 122, 127, 258, 344, 372, 378, 414 |
| DpnII | GATC | 8 cut(s) | 58, 120, 125, 256, 342, 370, 376, 412 |
| EcoRII | CCWGG | 1 cut(s) | 252 |
| FaeI | CATG | 5 cut(s) | 28, 55, 83, 111, 343 |
| FaiI | YATR | 6 cut(s) | 26, 53, 81, 109, 288, 341 |
| FaqI | GGGAC | 1 cut(s) | 416 |
| FatI | CATG | 5 cut(s) | 24, 51, 79, 107, 339 |
| FauI | CCCGC | 1 cut(s) | 77 |
| FbaI | TGATCA | 1 cut(s) | 370 |
| FokI | GGATG | 1 cut(s) | 7 |
| FspBI | CTAG | 1 cut(s) | 230 |
| Hin1II | CATG | 5 cut(s) | 28, 55, 83, 111, 343 |
| HinfI | GANTC | 1 cut(s) | 17 |
| HphI | GGTGA | 1 cut(s) | 344 |
| Hpy188I | TCNGA | 2 cut(s) | 125, 417 |
| Hpy188III | TCNNGA | 2 cut(s) | 374, 446 |
| HpyCH4III | ACNGT | 2 cut(s) | 308, 314 |
| HpyCH4IV | ACGT | 1 cut(s) | 189 |
| HpyCH4V | TGCA | 3 cut(s) | 28, 111, 116 |
| HpySE526I | ACGT | 1 cut(s) | 189 |
| Hsp92II | CATG | 5 cut(s) | 28, 55, 83, 111, 343 |
| Ksp22I | TGATCA | 1 cut(s) | 370 |
| Kzo9I | GATC | 8 cut(s) | 58, 120, 125, 256, 342, 370, 376, 412 |
| LpnPI | CCDG | 3 cut(s) | 239, 266, 359 |
| MaeI | CTAG | 1 cut(s) | 230 |
| MaeII | ACGT | 1 cut(s) | 189 |
| MaeIII | GTNAC | 2 cut(s) | 308, 314 |
| MalI | GATC | 8 cut(s) | 60, 122, 127, 258, 344, 372, 378, 414 |
| MboI | GATC | 8 cut(s) | 58, 120, 125, 256, 342, 370, 376, 412 |
| MboII | GAAGA | 5 cut(s) | 176, 218, 221, 274, 377 |
| MflI | RGATCY | 1 cut(s) | 412 |
| MluCI | AATT | 2 cut(s) | 298, 355 |
| MnlI | CCTC | 5 cut(s) | 46, 50, 234, 403, 442 |
| MslI | CAYNNNNRTG | 1 cut(s) | 218 |
| MspR9I | CCNGG | 1 cut(s) | 254 |
| MvaI | CCWGG | 1 cut(s) | 254 |
| NdeII | GATC | 8 cut(s) | 58, 120, 125, 256, 342, 370, 376, 412 |
| NlaIII | CATG | 5 cut(s) | 28, 55, 83, 111, 343 |
| NspI | RCATGY | 1 cut(s) | 55 |
| PciI | ACATGT | 1 cut(s) | 51 |
| PfeI | GAWTC | 1 cut(s) | 17 |
| PscI | ACATGT | 1 cut(s) | 51 |
| Psp6I | CCWGG | 1 cut(s) | 252 |
| PspGI | CCWGG | 1 cut(s) | 252 |
| PsuI | RGATCY | 1 cut(s) | 412 |
| RsaI | GTAC | 1 cut(s) | 89 |
| RsaNI | GTAC | 1 cut(s) | 88 |
| RseI | CAYNNNNRTG | 1 cut(s) | 218 |
| Sau3AI | GATC | 8 cut(s) | 58, 120, 125, 256, 342, 370, 376, 412 |
| ScrFI | CCNGG | 1 cut(s) | 254 |
| SetI | ASST | 3 cut(s) | 38, 192, 334 |
| SfcI | CTRYAG | 1 cut(s) | 304 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 218 |
| Sse9I | AATT | 2 cut(s) | 298, 355 |
| SsiI | CCGC | 1 cut(s) | 84 |
| SspI | AATATT | 1 cut(s) | 172 |
| SspMI | CTAG | 1 cut(s) | 230 |
| StyD4I | CCNGG | 1 cut(s) | 252 |
| TaaI | ACNGT | 2 cut(s) | 308, 314 |
| TaiI | ACGT | 1 cut(s) | 192 |
| TaqI | TCGA | 1 cut(s) | 75 |
| TasI | AATT | 2 cut(s) | 298, 355 |
| TfiI | GAWTC | 1 cut(s) | 17 |
| TscAI | CASTG | 2 cut(s) | 118, 253 |
| TspDTI | ATGAA | 2 cut(s) | 9, 434 |
| TspGWI | ACGGA | 1 cut(s) | 287 |
| TspRI | CASTG | 2 cut(s) | 118, 253 |
| XceI | RCATGY | 1 cut(s) | 55 |
| XspI | CTAG | 1 cut(s) | 230 |