Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0006152

Physical Location & Seq

Genomic Coordinates Forward (+)

66770818 .. 66776636

Gene Structure 5819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG419600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGGAATTTGATCTGAACCATGCAGTAGTGGGTGATGTGGTGGAGAAGAATGCATATTGTAATGGGGATTGTGACAAGGGTGGTTGTGCTCATTGTTTGTCCTCTTCAACTTCTTCTTGTTCTTCAAATTCATCATCAGTTCCTGTGATTTCTTCAATCTATTTGGAGCTTTGGCATGCTTGTGCTGGTCCACTCATTTCACTACCCAAGAAAGGAAATGTGGTTGTCTACTTCCCACAAGGTCACTTGGAACAAGTTGCCTCATCATCCCCTCCTTTCTCATCCATGGAGAAGCTTCACTTTGATCTCCAGCCACAGATCTTCTGCAAGGTTGTCAATGTCCAGCTGCTTGCTAACAAGGAGAATGATGAGGTCTATACACATGTTACTTTGCTTCCTCAGGCAGAGTCGGCAGGAATGAATTTGGAAGGCAAAGAGCTTGAAGAGTTGGGGGTGGATGAGGGGGATGGAGGATCACCTACAAAATCAACCCCTCACATGTTTTGCAAAACACTTACAGCTTCTGATACCAGTACCCATGGAGGGTTCTCTGTTCCTCGCAGAGCTGCAGAAGACTGTTTCCCTCCTCTGGATTATAAGCAGCAAAGGCCCTCTCAAGAGCTTGTTGCAAAGGACCTACATGGTGTAGAATGGAGGTTTCGACACATTTATAGAGGTCAGCCACGGCGGCATCTGCTCACCACAGGGTGGAGTATTTTTATAAGCCAAAAGAATCTTGTCTCAGGGGATGCTGTGCTCTTTCTGAGGGGTGAAAATGGAGAGCTTAGGTTGGGCATTAGAAGAGCTGGTCGGCCTAGAAATGGCCTTCCTGATTCAGTTATCGGCAACCAGAATTCTTATTCTAGTGTTCTTTCCCCAGTCGCTAATGCTGTATCCACCAAGAGCATGTTCCATGTATTCTACAGTCCAAGGGCAAGCCATGCGGAGTTTGTTATTCCCTACCAAAAATATGTTAGAAGCATTGCTACTCCGGTGACCATGGGGACAAGATTCAAAATGAGATTTGATAGGGATGATTCACCAGAAAGAAGGTGCAGTGGTGTAGTGACCGGCATCAGTGACTTGGATCCCTATCGATGGCCAAAATCAAAATGGAGATGCTTAATGGTGAGATGGGATGACGATATAGGAAATGATCATCAAGAACGAGTCTCTTTGTGGGAGATTGATCATTCTGTTTCTCTCCCACCTTTGAGCATTCAGTCTTCTCCAAGATTGAAGAAACTGCGGACAAGTCTGCAGGCATTCCCACCTAACCACTCCATTCCTGCTGGAAGTTGTGGGCTTATGGACTTTGAGGAGACAGTTAAATCCTCTAAGGTCTTGCAAGGTCAAGAAAATATGGGTTTCATATCACCCCACTATGGATGTGATGCATTAAAGAGCCCTGTGGATTTTGAGATGCAGCCTTCGGCACATCAAAATCTTGCATCACATGTATCCCAGAAGGCTACTATTGGCGAGTTCATGAGAGCTCACCACAACAGTTACACAGGATTTGCGGAATCTGACAGATTTCCGAAAGTCTTGCAAGGTCAAGAAATATGCCCGTTGAGATCTTTGACAGGAAAAGCAAATTTCAATCTGGGCAATTGGGAGTCCAATCTTGGTAGCACATCTTTCAACAGTTATCAGGCACCCAAACCGAATATGTTCACTCTGGGTTCTGAATCACTTCTAAACATGTATTTTCCTTATGGTGACATTCACAAGGTTGGCCAAGATCCCATGATATGCTCTAATACTACCAACTTTCCCAGAGAGAGTATCAAAGCGAACCCATATTCTATTCAGATGGGAGTTACAAGAAATGAAGTTGGAAGGCCAAAAAAACCTAGTGAGCATCAGCCACAGGAAAGTACCTCTGCTCTTCCTACTTTAGTGACAAATATAAAAAATCCGAAAGAGGTCAGTGCTGATGGAACTGCTAATGGATGTAAACTTTTCGGTTTTTCCTTATCGGGGGAAACTCCCACACTAAGTCAGAGTTCTAGTAAGAGGAGTTGTACAAAGGTTCACAAGCAAGGCAGCTTAGTGGGAAGAGCCATTGATCTCTCAAAACTGAATGGCTATGGTGACCTGCTGAGCGAACTAGAGCGGCTATTTAGCATGGAAGGCCTTCTACGAGATCCTAATAAAGGATGGCGGATCTTGTATACTGACAGTGAGAATGATGTCATGGTTGTAGGGGATGACCCATGGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001708 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0009987 GO:0010050 GO:0010158 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045165 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

742

Amino Acids

82.15

Weight (kDa)

6.92

Isoelectric Point (pI)

47.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	168 - 269	3.1e-22	B3 DNA binding domain
ARF_AD	PF06507	317 - 398	9.2e-33	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60450 AT5G60450
fragaria_vesca	FvH4_3g32860 FvH4_3g32860 FvH4_3g32860 FvH4_3g32860 FvH4_3g32860
malus_domestica	MD03G1116000.v1.1 MD11G1132400.v1.1
prunus_persica	Prupe.6G097700_v2.0.a1 Prupe.6G097700_v2.0.a1 Prupe.6G097700_v2.0.a1 Prupe.6G097700_v2.0.a1 Prupe.6G097700_v2.0.a1
pyrus_communis	pycom11g10920
rosa_chinensis	RchiOBHm_Chr5g0060011
rosa_laevigata	RLG00000035338
rosa_multiflora	Rmu_sc0000493.1_g000006
rosa_roxburghii	Rroxscaffold_1G00020650
rosa_rugosa	Rorug05G0327400 Rorug05G0327500 Rorug05G0327600
rosa_samantha	Rh5AG391400 Rh5BG404000 Rh5CG427800 Rh5DG419600
rosa_wichuraiana	Rw5G036880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	597, 722
Acc36I	ACCTGC	1 cut(s)	2109
AccB1I	GGYRCC	1 cut(s)	1657
AccB7I	CCANNNNNTGG	1 cut(s)	708
AccBSI	CCGCTC	1 cut(s)	2119
AccI	GTMKAC	2 cut(s)	228, 2177
AciI	CCGC	6 cut(s)	688, 944, 1249, 1523, 2119, 2167
AclWI	GGATC	6 cut(s)	481, 1082, 1095, 1739, 2144, 2177
AcoI	YGGCCR	2 cut(s)	1100, 1738
AcsI	RAATTY	5 cut(s)	5, 127, 421, 853, 1597
AdeI	CACNNNGTG	1 cut(s)	708
AfaI	GTAC	3 cut(s)	535, 1882, 2029
AfiI	CCNNNNNNNGG	9 cut(s)	212, 543, 589, 708, 821, 1098, 1385, 1983, 2159
AflIII	ACRYGT	4 cut(s)	382, 498, 1456, 1704
AgsI	TTSAA	8 cut(s)	108, 126, 156, 443, 1015, 1240, 1603, 1645
AjuI	GAANNNNNNNTTGG	2 cut(s)	893, 925
Alw21I	GWGCWC	3 cut(s)	91, 759, 1498
Alw26I	GTCTC	3 cut(s)	745, 1177, 1316
AlwI	GGATC	6 cut(s)	481, 1082, 1095, 1739, 2144, 2177
AlwNI	CAGNNNCTG	2 cut(s)	143, 524
AoxI	GGCC	7 cut(s)	608, 812, 823, 1100, 1738, 1844, 2137
ApeKI	GCWGC	5 cut(s)	346, 566, 601, 1426, 2049
ApoI	RAATTY	5 cut(s)	5, 127, 421, 853, 1597
Asp700I	GAANNNNTTC	3 cut(s)	1673, 1695, 2139
AspS9I	GGNCC	3 cut(s)	188, 609, 634
AvaII	GGWCC	2 cut(s)	188, 634
AxyI	CCTNAGG	1 cut(s)	399
BalI	TGGCCA	2 cut(s)	1102, 1740
BamHI	GGATCC	1 cut(s)	1087
BanI	GGYRCC	1 cut(s)	1657
BanII	GRGCYC	2 cut(s)	1409, 1498
BarI	GAAGNNNNNNTAC	4 cut(s)	970, 1002, 2127, 2159
BbsI	GAAGAC	2 cut(s)	579, 1218
Bbv12I	GWGCWC	3 cut(s)	91, 759, 1498
BbvI	GCAGC	5 cut(s)	333, 553, 613, 1438, 2061
BccI	CCATC	6 cut(s)	461, 1092, 1128, 1810, 1934, 2157
BceAI	ACGGC	1 cut(s)	701
BcgI	CGANNNNNNTGC	2 cut(s)	1531, 1565
BciVI	GTATCC	2 cut(s)	904, 1471
BclI	TGATCA	2 cut(s)	1156, 1189
BcoDI	GTCTC	3 cut(s)	745, 1177, 1316
BfaI	CTAG	5 cut(s)	816, 864, 1857, 2013, 2114
BfmI	CTRYAG	3 cut(s)	567, 922, 1259
BfuAI	ACCTGC	1 cut(s)	2109
BfuI	GTATCC	2 cut(s)	904, 1471
BglI	GCCNNNNNGGC	1 cut(s)	688
BglII	AGATCT	2 cut(s)	318, 1577
BisI	GCNGC	7 cut(s)	347, 567, 602, 689, 1427, 2050, 2120
BlpI	GCTNAGC	1 cut(s)	2105
BlsI	GCNGC	7 cut(s)	348, 568, 603, 690, 1428, 2051, 2121
Bme18I	GGWCC	2 cut(s)	188, 634
BmgT120I	GGNCC	3 cut(s)	188, 609, 634
BmiI	GGNNCC	2 cut(s)	1089, 1659
BmrI	ACTGGG	1 cut(s)	872
BmsI	GCATC	8 cut(s)	700, 739, 1083, 1109, 1384, 1413, 1460, 1873
BmuI	ACTGGG	1 cut(s)	872
BpiI	GAAGAC	2 cut(s)	579, 1218
BpmI	CTGGAG	1 cut(s)	293
Bpu10I	CCTNAGC	1 cut(s)	785
Bpu1102I	GCTNAGC	1 cut(s)	2105
BpuEI	CTTGAG	1 cut(s)	600
Bsa29I	ATCGAT	1 cut(s)	1096
BsaBI	GATNNNNATC	1 cut(s)	1092
BsaJI	CCNNGG	6 cut(s)	285, 538, 683, 929, 999, 2219
BsaWI	WCCGGW	1 cut(s)	991
Bsc4I	CCNNNNNNNGG	9 cut(s)	212, 543, 589, 708, 821, 1098, 1385, 1983, 2159
Bse118I	RCCGGY	1 cut(s)	1070
Bse1I	ACTGG	2 cut(s)	531, 878
Bse21I	CCTNAGG	1 cut(s)	399
Bse3DI	GCAATG	1 cut(s)	981
Bse8I	GATNNNNATC	1 cut(s)	1092
BseCI	ATCGAT	1 cut(s)	1096
BseDI	CCNNGG	6 cut(s)	285, 538, 683, 929, 999, 2219
BseJI	GATNNNNATC	1 cut(s)	1092
BseLI	CCNNNNNNNGG	9 cut(s)	212, 543, 589, 708, 821, 1098, 1385, 1983, 2159
BseMI	GCAATG	1 cut(s)	981
BseMII	CTCAG	4 cut(s)	413, 755, 756, 2096
BseNI	ACTGG	2 cut(s)	531, 878
BseRI	GAGGAG	3 cut(s)	576, 1334, 2035
BseXI	GCAGC	5 cut(s)	333, 553, 613, 1438, 2061
BsgI	GTGCAG	1 cut(s)	1075
BshFI	GGCC	7 cut(s)	610, 814, 825, 1102, 1740, 1846, 2139
BshNI	GGYRCC	1 cut(s)	1657
BshVI	ATCGAT	1 cut(s)	1096
BsiHKAI	GWGCWC	3 cut(s)	91, 759, 1498
BsiSI	CCGG	2 cut(s)	992, 1071
BslFI	GGGAC	1 cut(s)	1018
BslI	CCNNNNNNNGG	9 cut(s)	212, 543, 589, 708, 821, 1098, 1385, 1983, 2159
BsmAI	GTCTC	3 cut(s)	745, 1177, 1316
BsmFI	GGGAC	1 cut(s)	1018
BsmI	GAATGC	3 cut(s)	55, 1218, 1265
BsnI	GGCC	7 cut(s)	610, 814, 825, 1102, 1740, 1846, 2139
Bsp1286I	GDGCHC	4 cut(s)	91, 759, 1409, 1498
Bsp1407I	TGTACA	1 cut(s)	2027
Bsp1720I	GCTNAGC	1 cut(s)	2105
Bsp19I	CCATGG	4 cut(s)	285, 538, 999, 2219
BspACI	CCGC	6 cut(s)	688, 944, 1249, 1523, 2119, 2167
BspANI	GGCC	7 cut(s)	610, 814, 825, 1102, 1740, 1846, 2139
BspCNI	CTCAG	4 cut(s)	412, 755, 756, 2097
BspDI	ATCGAT	1 cut(s)	1096
BspHI	TCATGA	1 cut(s)	1488
BspLI	GGNNCC	2 cut(s)	1089, 1659
BspMAI	CTGCAG	2 cut(s)	571, 1263
BspMI	ACCTGC	1 cut(s)	2109
BspPI	GGATC	6 cut(s)	481, 1082, 1095, 1739, 2144, 2177
BspQI	GCTCTTC	3 cut(s)	796, 1896, 2056
BspT107I	GGYRCC	1 cut(s)	1657
BsrBI	CCGCTC	1 cut(s)	2119
BsrDI	GCAATG	1 cut(s)	981
BsrFI	RCCGGY	1 cut(s)	1070
BsrGI	TGTACA	1 cut(s)	2027
BsrI	ACTGG	2 cut(s)	531, 878
BssAI	RCCGGY	1 cut(s)	1070
BssECI	CCNNGG	6 cut(s)	285, 538, 683, 929, 999, 2219
BssNAI	GTATAC	1 cut(s)	2178
BssT1I	CCWWGG	5 cut(s)	285, 538, 929, 999, 2219
Bst1107I	GTATAC	1 cut(s)	2178
Bst4CI	ACNGT	6 cut(s)	578, 926, 1327, 1508, 1649, 2186
Bst6I	CTCTTC	5 cut(s)	109, 438, 796, 1896, 2056
BstAPI	GCANNNNNTGC	1 cut(s)	941
BstAUI	TGTACA	1 cut(s)	2027
BstC8I	GCNNGC	4 cut(s)	177, 351, 937, 1263
BstDEI	CTNAG	8 cut(s)	399, 742, 764, 785, 1338, 2000, 2053, 2105
BstDSI	CCRYGG	5 cut(s)	285, 538, 683, 999, 2219
BstEII	GGTNACC	2 cut(s)	994, 2096
BstENI	CCTNNNNNAGG	1 cut(s)	2157
BstMAI	GTCTC	3 cut(s)	745, 1177, 1316
BstMWI	GCNNNNNNNGC	6 cut(s)	410, 607, 688, 694, 941, 2136
BstNSI	RCATGY	6 cut(s)	179, 386, 502, 910, 1460, 1708
BstPI	GGTNACC	2 cut(s)	994, 2096
BstSFI	CTRYAG	3 cut(s)	567, 922, 1259
BstV1I	GCAGC	5 cut(s)	333, 553, 613, 1438, 2061
BstV2I	GAAGAC	2 cut(s)	579, 1218
BstX2I	RGATCY	6 cut(s)	318, 1087, 1577, 1744, 2149, 2169
BstYI	RGATCY	6 cut(s)	318, 1087, 1577, 1744, 2149, 2169
BstZ17I	GTATAC	1 cut(s)	2178
Bsu15I	ATCGAT	1 cut(s)	1096
Bsu36I	CCTNAGG	1 cut(s)	399
BsuI	GTATCC	2 cut(s)	904, 1471
BsuRI	GGCC	7 cut(s)	610, 814, 825, 1102, 1740, 1846, 2139
BsuTUI	ATCGAT	1 cut(s)	1096
BtgI	CCRYGG	5 cut(s)	285, 538, 683, 999, 2219
BtsI	GCAGTG	1 cut(s)	1063
BtsIMutI	CAGTG	4 cut(s)	1063, 1084, 1939, 2191
BveI	ACCTGC	1 cut(s)	2109
Cac8I	GCNNGC	4 cut(s)	177, 351, 937, 1263
CaiI	CAGNNNCTG	2 cut(s)	143, 524
CciI	TCATGA	1 cut(s)	1488
Cfr10I	RCCGGY	1 cut(s)	1070
Cfr13I	GGNCC	3 cut(s)	188, 609, 634
ClaI	ATCGAT	1 cut(s)	1096
Csp6I	GTAC	3 cut(s)	534, 1881, 2028
CviQI	GTAC	3 cut(s)	534, 1881, 2028
DdeI	CTNAG	8 cut(s)	399, 742, 764, 785, 1338, 2000, 2053, 2105
DraIII	CACNNNGTG	1 cut(s)	708
EaeI	YGGCCR	2 cut(s)	1100, 1738
Eam1104I	CTCTTC	5 cut(s)	109, 438, 796, 1896, 2056
EarI	CTCTTC	5 cut(s)	109, 438, 796, 1896, 2056
EciI	GGCGGA	1 cut(s)	2182
Ecl136II	GAGCTC	1 cut(s)	1496
Eco130I	CCWWGG	5 cut(s)	285, 538, 929, 999, 2219
Eco147I	AGGCCT	1 cut(s)	2139
Eco24I	GRGCYC	2 cut(s)	1409, 1498
Eco47I	GGWCC	2 cut(s)	188, 634
Eco53kI	GAGCTC	1 cut(s)	1496
Eco81I	CCTNAGG	1 cut(s)	399
Eco91I	GGTNACC	2 cut(s)	994, 2096
EcoICRI	GAGCTC	1 cut(s)	1496
EcoNI	CCTNNNNNAGG	1 cut(s)	2157
EcoO109I	RGGNCCY	2 cut(s)	609, 634
EcoO65I	GGTNACC	2 cut(s)	994, 2096
EcoRI	GAATTC	1 cut(s)	853
EcoT14I	CCWWGG	5 cut(s)	285, 538, 929, 999, 2219
EcoT22I	ATGCAT	2 cut(s)	55, 1399
EcoT38I	GRGCYC	2 cut(s)	1409, 1498
ErhI	CCWWGG	5 cut(s)	285, 538, 929, 999, 2219
FalI	AAGNNNNNCTT	2 cut(s)	284, 316
FaqI	GGGAC	1 cut(s)	1018
FbaI	TGATCA	2 cut(s)	1156, 1189
FblI	GTMKAC	2 cut(s)	228, 2177
Fnu4HI	GCNGC	7 cut(s)	347, 567, 602, 689, 1427, 2050, 2120
FriOI	GRGCYC	2 cut(s)	1409, 1498
Fsp4HI	GCNGC	7 cut(s)	347, 567, 602, 689, 1427, 2050, 2120
FspBI	CTAG	5 cut(s)	816, 864, 1857, 2013, 2114
GluI	GCNGC	7 cut(s)	347, 567, 602, 689, 1427, 2050, 2120
GsuI	CTGGAG	1 cut(s)	293
HaeIII	GGCC	7 cut(s)	610, 814, 825, 1102, 1740, 1846, 2139
HapII	CCGG	2 cut(s)	992, 1071
HindIII	AAGCTT	1 cut(s)	293
HinfI	GANTC	9 cut(s)	407, 733, 833, 1011, 1037, 1170, 1526, 1619, 1691
HpaII	CCGG	2 cut(s)	992, 1071
Hpy166II	GTNNAC	6 cut(s)	191, 229, 1677, 1961, 2038, 2178
Hpy188I	TCNGA	9 cut(s)	15, 526, 765, 1531, 1542, 1690, 1815, 1923, 2007
Hpy188III	TCNNGA	7 cut(s)	590, 617, 830, 1163, 1355, 1489, 1559
Hpy8I	GTNNAC	6 cut(s)	191, 229, 1677, 1961, 2038, 2178
HpyAV	CCTTC	8 cut(s)	422, 836, 1044, 1440, 1462, 1836, 2129, 2150
HpyCH4III	ACNGT	6 cut(s)	578, 926, 1327, 1508, 1649, 2186
HpyF10VI	GCNNNNNNNGC	6 cut(s)	410, 607, 688, 694, 941, 2136
HpyF3I	CTNAG	8 cut(s)	399, 742, 764, 785, 1338, 2000, 2053, 2105
Ksp22I	TGATCA	2 cut(s)	1156, 1189
LguI	GCTCTTC	3 cut(s)	796, 1896, 2056
LmnI	GCTCC	1 cut(s)	166
Lsp1109I	GCAGC	5 cut(s)	333, 553, 613, 1438, 2061
LweI	GCATC	8 cut(s)	700, 739, 1083, 1109, 1384, 1413, 1460, 1873
MaeI	CTAG	5 cut(s)	816, 864, 1857, 2013, 2114
MbiI	CCGCTC	1 cut(s)	2119
MfeI	CAATTG	1 cut(s)	1612
MflI	RGATCY	6 cut(s)	318, 1087, 1577, 1744, 2149, 2169
MhlI	GDGCHC	4 cut(s)	91, 759, 1409, 1498
MlsI	TGGCCA	2 cut(s)	1102, 1740
MluCI	AATT	6 cut(s)	5, 127, 421, 853, 1597, 1612
MluNI	TGGCCA	2 cut(s)	1102, 1740
MlyI	GAGTC	3 cut(s)	416, 1179, 1628
MmeI	TCCRAC	1 cut(s)	1819
Mox20I	TGGCCA	2 cut(s)	1102, 1740
Mph1103I	ATGCAT	2 cut(s)	55, 1399
MroXI	GAANNNNTTC	3 cut(s)	1673, 1695, 2139
MscI	TGGCCA	2 cut(s)	1102, 1740
MseI	TTAA	3 cut(s)	1124, 1329, 1400
MslI	CAYNNNNRTG	2 cut(s)	180, 2224
Msp20I	TGGCCA	2 cut(s)	1102, 1740
MspA1I	CMGCKG	1 cut(s)	346
MspI	CCGG	2 cut(s)	992, 1071
MunI	CAATTG	1 cut(s)	1612
Mva1269I	GAATGC	3 cut(s)	55, 1218, 1265
MwoI	GCNNNNNNNGC	6 cut(s)	410, 607, 688, 694, 941, 2136
NcoI	CCATGG	4 cut(s)	285, 538, 999, 2219
NlaIV	GGNNCC	2 cut(s)	1089, 1659
NmuCI	GTSAC	8 cut(s)	71, 242, 994, 1066, 1079, 1721, 1903, 2096
NsiI	ATGCAT	2 cut(s)	55, 1399
NspI	RCATGY	6 cut(s)	179, 386, 502, 910, 1460, 1708
PaeI	GCATGC	1 cut(s)	179
PagI	TCATGA	1 cut(s)	1488
PceI	AGGCCT	1 cut(s)	2139
PciI	ACATGT	4 cut(s)	382, 498, 1456, 1704
PciSI	GCTCTTC	3 cut(s)	796, 1896, 2056
PctI	GAATGC	3 cut(s)	55, 1218, 1265
PdmI	GAANNNNTTC	3 cut(s)	1673, 1695, 2139
PfeI	GAWTC	6 cut(s)	733, 833, 1011, 1037, 1526, 1691
PflMI	CCANNNNNTGG	1 cut(s)	708
PkrI	GCNGC	7 cut(s)	348, 568, 603, 690, 1428, 2051, 2121
PleI	GAGTC	3 cut(s)	415, 1178, 1627
PpsI	GAGTC	3 cut(s)	415, 1178, 1627
PpuMI	RGGWCCY	1 cut(s)	634
PscI	ACATGT	4 cut(s)	382, 498, 1456, 1704
PsiI	TTATAA	2 cut(s)	597, 722
Psp124BI	GAGCTC	1 cut(s)	1498
Psp5II	RGGWCCY	1 cut(s)	634
PspEI	GGTNACC	2 cut(s)	994, 2096
PspN4I	GGNNCC	2 cut(s)	1089, 1659
PspPI	GGNCC	3 cut(s)	188, 609, 634
PspPPI	RGGWCCY	1 cut(s)	634
PstI	CTGCAG	2 cut(s)	571, 1263
PstNI	CAGNNNCTG	2 cut(s)	143, 524
PsuI	RGATCY	6 cut(s)	318, 1087, 1577, 1744, 2149, 2169
PvuII	CAGCTG	1 cut(s)	346
RsaI	GTAC	3 cut(s)	535, 1882, 2029
RsaNI	GTAC	3 cut(s)	534, 1881, 2028
RseI	CAYNNNNRTG	2 cut(s)	180, 2224
SacI	GAGCTC	1 cut(s)	1498
SapI	GCTCTTC	3 cut(s)	796, 1896, 2056
SaqAI	TTAA	3 cut(s)	1124, 1329, 1400
SatI	GCNGC	7 cut(s)	347, 567, 602, 689, 1427, 2050, 2120
Sau96I	GGNCC	3 cut(s)	188, 609, 634
SchI	GAGTC	3 cut(s)	416, 1179, 1628
SduI	GDGCHC	4 cut(s)	91, 759, 1409, 1498
SfaNI	GCATC	8 cut(s)	700, 739, 1083, 1109, 1384, 1413, 1460, 1873
SfcI	CTRYAG	3 cut(s)	567, 922, 1259
SinI	GGWCC	2 cut(s)	188, 634
SmiMI	CAYNNNNRTG	2 cut(s)	180, 2224
SmlI	CTYRAG	1 cut(s)	615
SmoI	CTYRAG	1 cut(s)	615
SphI	GCATGC	1 cut(s)	179
Sse9I	AATT	6 cut(s)	5, 127, 421, 853, 1597, 1612
SseBI	AGGCCT	1 cut(s)	2139
SsiI	CCGC	6 cut(s)	688, 944, 1249, 1523, 2119, 2167
SspMI	CTAG	5 cut(s)	816, 864, 1857, 2013, 2114
SstI	GAGCTC	1 cut(s)	1498
StuI	AGGCCT	1 cut(s)	2139
StyI	CCWWGG	5 cut(s)	285, 538, 929, 999, 2219
TaaI	ACNGT	6 cut(s)	578, 926, 1327, 1508, 1649, 2186
TaqI	TCGA	2 cut(s)	661, 1096
TasI	AATT	6 cut(s)	5, 127, 421, 853, 1597, 1612
TatI	WGTACW	1 cut(s)	2027
TauI	GCSGC	2 cut(s)	691, 2122
TfiI	GAWTC	6 cut(s)	733, 833, 1011, 1037, 1526, 1691
Tru1I	TTAA	3 cut(s)	1124, 1329, 1400
Tru9I	TTAA	3 cut(s)	1124, 1329, 1400
TscAI	CASTG	4 cut(s)	1063, 1084, 1939, 2191
TseFI	GTSAC	8 cut(s)	71, 242, 994, 1066, 1079, 1721, 1903, 2096
TseI	GCWGC	5 cut(s)	346, 566, 601, 1426, 2049
Tsp45I	GTSAC	8 cut(s)	71, 242, 994, 1066, 1079, 1721, 1903, 2096
TspDTI	ATGAA	5 cut(s)	120, 434, 1360, 1477, 1848
TspRI	CASTG	4 cut(s)	1063, 1084, 1939, 2191
Van91I	CCANNNNNTGG	1 cut(s)	708
VpaK11BI	GGWCC	2 cut(s)	188, 634
XagI	CCTNNNNNAGG	1 cut(s)	2157
XapI	RAATTY	5 cut(s)	5, 127, 421, 853, 1597
XceI	RCATGY	6 cut(s)	179, 386, 502, 910, 1460, 1708
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1110
XmiI	GTMKAC	2 cut(s)	228, 2177
XmnI	GAANNNNTTC	3 cut(s)	1673, 1695, 2139
XspI	CTAG	5 cut(s)	816, 864, 1857, 2013, 2114
Zsp2I	ATGCAT	2 cut(s)	55, 1399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.