Rh5DG486600

Phosphoinositide phospholipase C

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
76558745 .. 76562613
3869 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG486600.1

Sequence Viewer

Length: 1431 bp
ATGGGGAGTTACCGGATGTGCGTCTGCTTCACTCGCAAGTTCAGGATCACAGAGGCGGAGCCGCCTTCTGACGTGAAGGCGTATTTCGATAAGTACGCCGAGGGAGGGACCCACATGACCGCCGAGCAGCTCAGGAGCTTCCTGGCGGATGTCCAGGGCTACGGCGGCTCGTCGACCTCGGACGCCGAGCGGATCGTCGAGCAGGTGCTGCAGAAGAGGCACCACCACATTGCCAAGTTGATAACAAGGCGCACGCTCACTCTAGAAGACTTCCACCATTACTTGTTCTCCGCCGATCTCAATCCTCCAATCGAGAACCAGGTTCATCAGGATATGAAGGCTCCATTGTCTCATTACTACATTTATACTGGACATAATTCATACCTGACTGGAAATCAACTCAGTAGTGACTGTAGTCATGTGCCAATCATAAAGGCGCTGAAGAGAGGTGTGAGAGTGGTGGAGCTTGATCTTTGGCCAAATTCCAAAAAGGATGATGTTAATGTTCTTCATGGAAGGACCTTGACAACCCCTGTGGAACTTGTTAAATGCTTGAAATCAATTAAGGAGCATGCTTTTACTGATTCTCCATACCCTGTAGTCATAACTCTTGAAGACCACCTTACCCCTGATCTCCAAGCTAAAGTAGCAAAGCTGCTCATGAAGACATTTAAGGATATGTTGTTTATTCCTGATTCCGAATGTTTCAAAAAATTACCTTCACCAGAAGAACTGAAGTATCGAATTATCATATCTACCAAACCTCCTAAGGAGTACCTTGAGGATAAATGTGTCACTGTCAAGGCAGATAACATACACAAGAGAAAAGATAGCGAAGAAGATGCATGGGGGAATGAACCTTCAGAGCTTACGGAGGAACACGAAGATGTTGATACGAGTGAAAGTGAAGCAAGTGAACAAAATATGGATTACGAGGATAACAATAACTCTAATCGTGGAGCAGAACCCGCATCATACAAACGTCTCATTGCACTCCATGCTGGGAAACCAAATGGTGGTTTAAAGGAGGCACTAAAAGTTGAAGTTGATAGAGTTAGACGCCTTAGTTTGAGTGAACAAGCACTTGAGAAGGCTGCTGAATCTCATGGAACTGATGTTGTTAGATTCACCCAGAAGAACATTTTAAGGGTGTATCCAAAAGGAACTCGGTTCAACTCCTCCAACTACAAGCCGCTTATTGGCTGGATGCATGGTGCTCAAATGGTTGCATTTAATATGCAGGGATATGGTAAATCTCTTTGGCTGATGCATGGGATGTTTAGAGCAAATGGGGGCTGTGGTTATGTGAAAAAGCCTGATTTTGTTATGAACGATGAGCAGATTTTCGATCCTAAAGCAAAATTGCCAGTAAAGAAGACTTTAAAGGTGAGCACACTTCTATCCTTTTCTCCGAGTCTGAAGTTGAAGTAA

Protein Analysis

476

Amino Acids

54.08

Weight (kDa)

8.01

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PI-PLC-X PF00388 112 - 254 1.1e-53 Phosphatidylinositol-specific phospholipase C, X domain
PI-PLC-Y PF00387 355 - 441 5.8e-29 Phosphatidylinositol-specific phospholipase C, Y domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 193
Acc36I ACCTGC 1 cut(s) 193
AccB1I GGYRCC 1 cut(s) 219
AccB7I CCANNNNNTGG 1 cut(s) 1016
AccBSI CCGCTC 1 cut(s) 190
AccI GTMKAC 1 cut(s) 173
AciI CCGC 9 cut(s) 56, 62, 120, 146, 165, 190, 291, 969, 1193
AclWI GGATC 3 cut(s) 53, 200, 1343
AcoI YGGCCR 1 cut(s) 476
AcsI RAATTY 1 cut(s) 481
AcuI CTGAAG 3 cut(s) 461, 755, 846
AcyI GRCGYC 2 cut(s) 183, 1060
AfaI GTAC 2 cut(s) 95, 776
AfiI CCNNNNNNNGG 3 cut(s) 105, 1016, 1199
AgsI TTSAA 6 cut(s) 556, 614, 709, 1043, 1174, 1426
AjiI CACGTC 1 cut(s) 73
AjnI CCWGG 3 cut(s) 141, 153, 318
AluBI AGCT 6 cut(s) 130, 138, 466, 641, 655, 868
AluI AGCT 6 cut(s) 130, 138, 466, 641, 655, 868
Alw21I GWGCWC 2 cut(s) 1219, 1394
Alw26I GTCTC 2 cut(s) 354, 989
AlwI GGATC 3 cut(s) 53, 200, 1343
AlwNI CAGNNNCTG 1 cut(s) 208
AoxI GGCC 1 cut(s) 476
ApeKI GCWGC 4 cut(s) 127, 208, 655, 1094
ApoI RAATTY 1 cut(s) 481
AspLEI GCGC 2 cut(s) 252, 439
AspS9I GGNCC 2 cut(s) 108, 519
AsuHPI GGTGA 3 cut(s) 714, 1120, 1399
AvaII GGWCC 2 cut(s) 108, 519
AxyI CCTNAGG 1 cut(s) 768
BaeI ACNNNNGTAYC 2 cut(s) 722, 755
BalI TGGCCA 1 cut(s) 478
BanI GGYRCC 1 cut(s) 219
BbsI GAAGAC 4 cut(s) 273, 621, 671, 1382
Bbv12I GWGCWC 2 cut(s) 1219, 1394
BbvI GCAGC 4 cut(s) 139, 195, 642, 1081
BceAI ACGGC 1 cut(s) 178
BcgI CGANNNNNNTGC 2 cut(s) 824, 858
BciT130I CCWGG 3 cut(s) 143, 155, 320
BciVI GTATCC 1 cut(s) 1164
BcoDI GTCTC 2 cut(s) 354, 989
BfaI CTAG 1 cut(s) 263
BfmI CTRYAG 3 cut(s) 209, 412, 597
BfoI RGCGCY 1 cut(s) 440
BfuAI ACCTGC 1 cut(s) 193
BfuI GTATCC 1 cut(s) 1164
BisI GCNGC 7 cut(s) 62, 128, 166, 209, 656, 1095, 1193
BlsI GCNGC 7 cut(s) 63, 129, 167, 210, 657, 1096, 1194
Bme1390I CCNGG 3 cut(s) 143, 155, 320
Bme18I GGWCC 2 cut(s) 108, 519
BmgBI CACGTC 1 cut(s) 73
BmgT120I GGNCC 2 cut(s) 108, 519
BmiI GGNNCC 5 cut(s) 60, 109, 110, 221, 342
BmrFI CCNGG 3 cut(s) 143, 155, 320
BmsI GCATC 4 cut(s) 832, 980, 1197, 1257
BoxI GACNNNNGTC 1 cut(s) 414
BpiI GAAGAC 4 cut(s) 273, 621, 671, 1382
Bpu10I CCTNAGC 1 cut(s) 131
BpuEI CTTGAG 2 cut(s) 800, 1106
BsaBI GATNNNNATC 1 cut(s) 300
BsaHI GRCGYC 2 cut(s) 183, 1060
BsaJI CCNNGG 3 cut(s) 99, 154, 177
BsaWI WCCGGW 1 cut(s) 12
BsaXI ACNNNNNCTCC 6 cut(s) 272, 302, 571, 601, 748, 778
Bsc4I CCNNNNNNNGG 3 cut(s) 105, 1016, 1199
Bse1I ACTGG 3 cut(s) 373, 394, 1367
Bse21I CCTNAGG 1 cut(s) 768
Bse3DI GCAATG 2 cut(s) 228, 987
Bse8I GATNNNNATC 1 cut(s) 300
BseBI CCWGG 3 cut(s) 143, 155, 320
BseDI CCNNGG 3 cut(s) 99, 154, 177
BseGI GGATG 5 cut(s) 21, 154, 499, 1212, 1281
BseJI GATNNNNATC 1 cut(s) 300
BseLI CCNNNNNNNGG 3 cut(s) 105, 1016, 1199
BseMI GCAATG 2 cut(s) 228, 987
BseMII CTCAG 2 cut(s) 145, 415
BseNI ACTGG 3 cut(s) 373, 394, 1367
BseRI GAGGAG 1 cut(s) 1168
BseXI GCAGC 4 cut(s) 139, 195, 642, 1081
BseYI CCCAGC 1 cut(s) 1001
BshFI GGCC 1 cut(s) 478
BshNI GGYRCC 1 cut(s) 219
BsiHKAI GWGCWC 2 cut(s) 1219, 1394
BsiSI CCGG 1 cut(s) 13
BslFI GGGAC 1 cut(s) 121
BslI CCNNNNNNNGG 3 cut(s) 105, 1016, 1199
BsmAI GTCTC 2 cut(s) 354, 989
BsmBI CGTCTC 1 cut(s) 989
BsmFI GGGAC 1 cut(s) 121
BsnI GGCC 1 cut(s) 478
Bsp1286I GDGCHC 2 cut(s) 1219, 1394
Bsp143I GATC 6 cut(s) 45, 192, 295, 469, 631, 1348
BspACI CCGC 9 cut(s) 56, 62, 120, 146, 165, 190, 291, 969, 1193
BspANI GGCC 1 cut(s) 478
BspCNI CTCAG 2 cut(s) 144, 414
BspHI TCATGA 1 cut(s) 660
BspLI GGNNCC 5 cut(s) 60, 109, 110, 221, 342
BspMAI CTGCAG 1 cut(s) 213
BspMI ACCTGC 1 cut(s) 193
BspPI GGATC 3 cut(s) 53, 200, 1343
BspT107I GGYRCC 1 cut(s) 219
BsrBI CCGCTC 1 cut(s) 190
BsrDI GCAATG 2 cut(s) 228, 987
BsrI ACTGG 3 cut(s) 373, 394, 1367
BssECI CCNNGG 3 cut(s) 99, 154, 177
BssMI GATC 6 cut(s) 45, 192, 295, 469, 631, 1348
BssNI GRCGYC 2 cut(s) 183, 1060
Bst2UI CCWGG 3 cut(s) 143, 155, 320
Bst4CI ACNGT 2 cut(s) 413, 799
Bst6I CTCTTC 2 cut(s) 209, 437
BstACI GRCGYC 2 cut(s) 183, 1060
BstAPI GCANNNNNTGC 2 cut(s) 208, 998
BstC8I GCNNGC 2 cut(s) 254, 573
BstDEI CTNAG 4 cut(s) 131, 401, 768, 1064
BstF5I GGATG 5 cut(s) 21, 154, 499, 1212, 1281
BstH2I RGCGCY 1 cut(s) 440
BstHHI GCGC 2 cut(s) 252, 439
BstKTI GATC 6 cut(s) 48, 195, 298, 472, 634, 1351
BstMAI GTCTC 2 cut(s) 354, 989
BstMBI GATC 6 cut(s) 45, 192, 295, 469, 631, 1348
BstMWI GCNNNNNNNGC 7 cut(s) 33, 165, 208, 217, 647, 968, 998
BstNI CCWGG 3 cut(s) 143, 155, 320
BstNSI RCATGY 1 cut(s) 575
BstPAI GACNNNNGTC 1 cut(s) 414
BstSCI CCNGG 3 cut(s) 141, 153, 318
BstSFI CTRYAG 3 cut(s) 209, 412, 597
BstV1I GCAGC 4 cut(s) 139, 195, 642, 1081
BstV2I GAAGAC 4 cut(s) 273, 621, 671, 1382
Bsu36I CCTNAGG 1 cut(s) 768
BsuI GTATCC 1 cut(s) 1164
BsuRI GGCC 1 cut(s) 478
BtrI CACGTC 1 cut(s) 73
BtsCI GGATG 5 cut(s) 21, 154, 499, 1212, 1281
BtsIMutI CAGTG 1 cut(s) 795
BveI ACCTGC 1 cut(s) 193
Cac8I GCNNGC 2 cut(s) 254, 573
CaiI CAGNNNCTG 1 cut(s) 208
CciI TCATGA 1 cut(s) 660
CfoI GCGC 2 cut(s) 252, 439
Cfr13I GGNCC 2 cut(s) 108, 519
CseI GACGC 3 cut(s) 10, 191, 1068
CsiI ACCWGGT 1 cut(s) 318
Csp6I GTAC 2 cut(s) 94, 775
CspCI CAANNNNNGTGG 2 cut(s) 516, 551
CviQI GTAC 2 cut(s) 94, 775
DdeI CTNAG 4 cut(s) 131, 401, 768, 1064
DpnI GATC 6 cut(s) 47, 194, 297, 471, 633, 1350
DpnII GATC 6 cut(s) 45, 192, 295, 469, 631, 1348
DraI TTTAAA 2 cut(s) 1023, 1383
EaeI YGGCCR 1 cut(s) 476
Eam1104I CTCTTC 2 cut(s) 209, 437
EarI CTCTTC 2 cut(s) 209, 437
EciI GGCGGA 3 cut(s) 71, 161, 280
Eco47I GGWCC 2 cut(s) 108, 519
Eco57I CTGAAG 3 cut(s) 461, 755, 846
Eco81I CCTNAGG 1 cut(s) 768
EcoO109I RGGNCCY 2 cut(s) 108, 519
EcoRII CCWGG 3 cut(s) 141, 153, 318
EcoT22I ATGCAT 3 cut(s) 847, 1212, 1272
Esp3I CGTCTC 1 cut(s) 989
FalI AAGNNNNNCTT 2 cut(s) 606, 638
FaqI GGGAC 1 cut(s) 121
FauI CCCGC 1 cut(s) 976
FblI GTMKAC 1 cut(s) 173
Fnu4HI GCNGC 7 cut(s) 62, 128, 166, 209, 656, 1095, 1193
FokI GGATG 5 cut(s) 28, 161, 506, 1219, 1288
Fsp4HI GCNGC 7 cut(s) 62, 128, 166, 209, 656, 1095, 1193
FspBI CTAG 1 cut(s) 263
GlaI GCGC 2 cut(s) 251, 438
GluI GCNGC 7 cut(s) 62, 128, 166, 209, 656, 1095, 1193
GsaI CCCAGC 1 cut(s) 1005
HaeII RGCGCY 1 cut(s) 440
HaeIII GGCC 1 cut(s) 478
HapII CCGG 1 cut(s) 13
HgaI GACGC 3 cut(s) 10, 191, 1068
HhaI GCGC 2 cut(s) 252, 439
Hin1I GRCGYC 2 cut(s) 183, 1060
Hin6I GCGC 2 cut(s) 250, 437
HinP1I GCGC 2 cut(s) 250, 437
HincII GTYRAC 1 cut(s) 174
HindII GTYRAC 1 cut(s) 174
HinfI GANTC 5 cut(s) 584, 695, 1100, 1125, 1414
HpaII CCGG 1 cut(s) 13
HphI GGTGA 3 cut(s) 714, 1120, 1399
Hpy166II GTNNAC 3 cut(s) 174, 917, 1076
Hpy188I TCNGA 6 cut(s) 70, 181, 700, 865, 1413, 1419
Hpy188III TCNNGA 8 cut(s) 43, 133, 263, 313, 329, 611, 661, 692
Hpy8I GTNNAC 3 cut(s) 174, 917, 1076
Hpy99I CGWCG 2 cut(s) 175, 200
HpyAV CCTTC 7 cut(s) 70, 75, 331, 510, 729, 870, 1084
HpyCH4III ACNGT 2 cut(s) 413, 799
HpyCH4IV ACGT 2 cut(s) 72, 982
HpyCH4V TGCA 7 cut(s) 211, 845, 992, 1210, 1229, 1240, 1270
HpyF10VI GCNNNNNNNGC 7 cut(s) 33, 165, 208, 217, 647, 968, 998
HpyF3I CTNAG 4 cut(s) 131, 401, 768, 1064
HpySE526I ACGT 2 cut(s) 72, 982
Hsp92I GRCGYC 2 cut(s) 183, 1060
HspAI GCGC 2 cut(s) 250, 437
KflI GGGWCCC 1 cut(s) 108
Kzo9I GATC 6 cut(s) 45, 192, 295, 469, 631, 1348
LmnI GCTCC 6 cut(s) 58, 135, 346, 463, 568, 959
Lsp1109I GCAGC 4 cut(s) 139, 195, 642, 1081
LweI GCATC 4 cut(s) 832, 980, 1197, 1257
MabI ACCWGGT 1 cut(s) 318
MaeI CTAG 1 cut(s) 263
MaeII ACGT 2 cut(s) 72, 982
MaeIII GTNAC 3 cut(s) 8, 407, 793
MalI GATC 6 cut(s) 47, 194, 297, 471, 633, 1350
MbiI CCGCTC 1 cut(s) 190
MboI GATC 6 cut(s) 45, 192, 295, 469, 631, 1348
MhlI GDGCHC 2 cut(s) 1219, 1394
MlsI TGGCCA 1 cut(s) 478
MluCI AATT 6 cut(s) 376, 481, 561, 713, 744, 1361
MluNI TGGCCA 1 cut(s) 478
MlyI GAGTC 1 cut(s) 1423
MmeI TCCRAC 1 cut(s) 1206
Mox20I TGGCCA 1 cut(s) 478
Mph1103I ATGCAT 3 cut(s) 847, 1212, 1272
MscI TGGCCA 1 cut(s) 478
MseI TTAA 8 cut(s) 501, 546, 564, 672, 1022, 1145, 1233, 1382
MslI CAYNNNNRTG 1 cut(s) 885
Msp20I TGGCCA 1 cut(s) 478
MspI CCGG 1 cut(s) 13
MspR9I CCNGG 3 cut(s) 143, 155, 320
MvaI CCWGG 3 cut(s) 143, 155, 320
MwoI GCNNNNNNNGC 7 cut(s) 33, 165, 208, 217, 647, 968, 998
NdeII GATC 6 cut(s) 45, 192, 295, 469, 631, 1348
NlaIV GGNNCC 5 cut(s) 60, 109, 110, 221, 342
NmeAIII GCCGAG 3 cut(s) 124, 148, 211
NmuCI GTSAC 2 cut(s) 407, 793
NsiI ATGCAT 3 cut(s) 847, 1212, 1272
NspI RCATGY 1 cut(s) 575
PaeI GCATGC 1 cut(s) 575
PagI TCATGA 1 cut(s) 660
PaqCI CACCTGC 1 cut(s) 193
PfeI GAWTC 4 cut(s) 584, 695, 1100, 1125
PflMI CCANNNNNTGG 1 cut(s) 1016
PkrI GCNGC 7 cut(s) 63, 129, 167, 210, 657, 1096, 1194
PleI GAGTC 1 cut(s) 1422
PpsI GAGTC 1 cut(s) 1422
PpuMI RGGWCCY 2 cut(s) 108, 519
PshAI GACNNNNGTC 1 cut(s) 414
Psp5II RGGWCCY 2 cut(s) 108, 519
Psp6I CCWGG 3 cut(s) 141, 153, 318
PspFI CCCAGC 1 cut(s) 1001
PspGI CCWGG 3 cut(s) 141, 153, 318
PspN4I GGNNCC 5 cut(s) 60, 109, 110, 221, 342
PspPI GGNCC 2 cut(s) 108, 519
PspPPI RGGWCCY 2 cut(s) 108, 519
PstI CTGCAG 1 cut(s) 213
PstNI CAGNNNCTG 1 cut(s) 208
RsaI GTAC 2 cut(s) 95, 776
RsaNI GTAC 2 cut(s) 94, 775
RseI CAYNNNNRTG 1 cut(s) 885
SalI GTCGAC 1 cut(s) 172
SaqAI TTAA 8 cut(s) 501, 546, 564, 672, 1022, 1145, 1233, 1382
SatI GCNGC 7 cut(s) 62, 128, 166, 209, 656, 1095, 1193
Sau3AI GATC 6 cut(s) 45, 192, 295, 469, 631, 1348
Sau96I GGNCC 2 cut(s) 108, 519
SchI GAGTC 1 cut(s) 1423
ScrFI CCNGG 3 cut(s) 143, 155, 320
SduI GDGCHC 2 cut(s) 1219, 1394
SexAI ACCWGGT 1 cut(s) 318
SfaNI GCATC 4 cut(s) 832, 980, 1197, 1257
SfcI CTRYAG 3 cut(s) 209, 412, 597
SinI GGWCC 2 cut(s) 108, 519
SmiMI CAYNNNNRTG 1 cut(s) 885
SmlI CTYRAG 2 cut(s) 779, 1085
SmoI CTYRAG 2 cut(s) 779, 1085
SphI GCATGC 1 cut(s) 575
Sse9I AATT 6 cut(s) 376, 481, 561, 713, 744, 1361
SsiI CCGC 9 cut(s) 56, 62, 120, 146, 165, 190, 291, 969, 1193
SspMI CTAG 1 cut(s) 263
StyD4I CCNGG 3 cut(s) 141, 153, 318
TaaI ACNGT 2 cut(s) 413, 799
TaiI ACGT 2 cut(s) 75, 985
TaqI TCGA 6 cut(s) 87, 173, 198, 312, 742, 1347
TasI AATT 6 cut(s) 376, 481, 561, 713, 744, 1361
TauI GCSGC 3 cut(s) 64, 168, 1195
TfiI GAWTC 4 cut(s) 584, 695, 1100, 1125
Tru1I TTAA 8 cut(s) 501, 546, 564, 672, 1022, 1145, 1233, 1382
Tru9I TTAA 8 cut(s) 501, 546, 564, 672, 1022, 1145, 1233, 1382
TscAI CASTG 1 cut(s) 802
TseFI GTSAC 2 cut(s) 407, 793
TseI GCWGC 4 cut(s) 127, 208, 655, 1094
Tsp45I GTSAC 2 cut(s) 407, 793
TspDTI ATGAA 7 cut(s) 314, 350, 369, 500, 677, 870, 1343
TspGWI ACGGA 1 cut(s) 887
TspRI CASTG 1 cut(s) 802
Van91I CCANNNNNTGG 1 cut(s) 1016
VpaK11BI GGWCC 2 cut(s) 108, 519
XapI RAATTY 1 cut(s) 481
XbaI TCTAGA 1 cut(s) 262
XceI RCATGY 1 cut(s) 575
XmiI GTMKAC 1 cut(s) 173
XspI CTAG 1 cut(s) 263
Zsp2I ATGCAT 3 cut(s) 847, 1212, 1272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.