SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom16g06030 |
| rosa_laevigata | RLG00000013339 |
| rosa_multiflora | Rmu_co8303975.1_g000001 Rmu_sc0000206.1_g000003 Rmu_sc0007276.1_g000001 Rmu_sc0040007.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00191700 |
| rosa_samantha | Rh6AG216100 Rh6CG223500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 82 |
| AciI | CCGC | 1 cut(s) | 215 |
| AcsI | RAATTY | 1 cut(s) | 120 |
| AfaI | GTAC | 2 cut(s) | 46, 128 |
| AflIII | ACRYGT | 1 cut(s) | 29 |
| AluBI | AGCT | 2 cut(s) | 142, 203 |
| AluI | AGCT | 2 cut(s) | 142, 203 |
| Alw21I | GWGCWC | 1 cut(s) | 205 |
| ApoI | RAATTY | 1 cut(s) | 120 |
| AxyI | CCTNAGG | 1 cut(s) | 78 |
| BanI | GGYRCC | 1 cut(s) | 82 |
| BanII | GRGCYC | 1 cut(s) | 205 |
| Bbv12I | GWGCWC | 1 cut(s) | 205 |
| BisI | GCNGC | 1 cut(s) | 215 |
| BlsI | GCNGC | 1 cut(s) | 216 |
| BmiI | GGNNCC | 1 cut(s) | 84 |
| BmsI | GCATC | 2 cut(s) | 136, 201 |
| Bse21I | CCTNAGG | 1 cut(s) | 78 |
| BseGI | GGATG | 2 cut(s) | 76, 178 |
| BseMII | CTCAG | 2 cut(s) | 69, 78 |
| BshNI | GGYRCC | 1 cut(s) | 82 |
| BsiHKAI | GWGCWC | 1 cut(s) | 205 |
| Bsp1286I | GDGCHC | 1 cut(s) | 205 |
| Bsp143I | GATC | 1 cut(s) | 90 |
| BspACI | CCGC | 1 cut(s) | 215 |
| BspCNI | CTCAG | 2 cut(s) | 70, 79 |
| BspLI | GGNNCC | 1 cut(s) | 84 |
| BspT107I | GGYRCC | 1 cut(s) | 82 |
| BssMI | GATC | 1 cut(s) | 90 |
| BstDEI | CTNAG | 3 cut(s) | 78, 87, 197 |
| BstF5I | GGATG | 2 cut(s) | 76, 178 |
| BstKTI | GATC | 1 cut(s) | 93 |
| BstMBI | GATC | 1 cut(s) | 90 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 82 |
| BstNSI | RCATGY | 1 cut(s) | 33 |
| Bsu36I | CCTNAGG | 1 cut(s) | 78 |
| BtsCI | GGATG | 2 cut(s) | 76, 178 |
| Csp6I | GTAC | 2 cut(s) | 45, 127 |
| CviAII | CATG | 2 cut(s) | 30, 231 |
| CviJI | RGCY | 5 cut(s) | 14, 76, 106, 142, 203 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 76, 106, 142, 203 |
| CviQI | GTAC | 2 cut(s) | 45, 127 |
| DdeI | CTNAG | 3 cut(s) | 78, 87, 197 |
| DpnI | GATC | 1 cut(s) | 92 |
| DpnII | GATC | 1 cut(s) | 90 |
| Ecl136II | GAGCTC | 1 cut(s) | 203 |
| Eco24I | GRGCYC | 1 cut(s) | 205 |
| Eco53kI | GAGCTC | 1 cut(s) | 203 |
| Eco81I | CCTNAGG | 1 cut(s) | 78 |
| EcoICRI | GAGCTC | 1 cut(s) | 203 |
| EcoT38I | GRGCYC | 1 cut(s) | 205 |
| FaeI | CATG | 2 cut(s) | 33, 234 |
| FaiI | YATR | 2 cut(s) | 31, 232 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 95, 127 |
| FatI | CATG | 2 cut(s) | 29, 230 |
| Fnu4HI | GCNGC | 1 cut(s) | 215 |
| FokI | GGATG | 2 cut(s) | 83, 185 |
| FriOI | GRGCYC | 1 cut(s) | 205 |
| Fsp4HI | GCNGC | 1 cut(s) | 215 |
| GluI | GCNGC | 1 cut(s) | 215 |
| Hin1II | CATG | 2 cut(s) | 33, 234 |
| HincII | GTYRAC | 1 cut(s) | 190 |
| HindII | GTYRAC | 1 cut(s) | 190 |
| HindIII | AAGCTT | 1 cut(s) | 140 |
| Hpy166II | GTNNAC | 1 cut(s) | 190 |
| Hpy188III | TCNNGA | 1 cut(s) | 24 |
| Hpy8I | GTNNAC | 1 cut(s) | 190 |
| HpyAV | CCTTC | 1 cut(s) | 228 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 82 |
| HpyF3I | CTNAG | 3 cut(s) | 78, 87, 197 |
| Hsp92II | CATG | 2 cut(s) | 33, 234 |
| Kzo9I | GATC | 1 cut(s) | 90 |
| LmnI | GCTCC | 2 cut(s) | 115, 208 |
| LpnPI | CCDG | 3 cut(s) | 90, 99, 120 |
| LweI | GCATC | 2 cut(s) | 136, 201 |
| MalI | GATC | 1 cut(s) | 92 |
| MboI | GATC | 1 cut(s) | 90 |
| MhlI | GDGCHC | 1 cut(s) | 205 |
| MluCI | AATT | 2 cut(s) | 120, 178 |
| MnlI | CCTC | 2 cut(s) | 61, 73 |
| MseI | TTAA | 2 cut(s) | 102, 161 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 82 |
| NdeII | GATC | 1 cut(s) | 90 |
| NlaIII | CATG | 2 cut(s) | 33, 234 |
| NlaIV | GGNNCC | 1 cut(s) | 84 |
| NspI | RCATGY | 1 cut(s) | 33 |
| PciI | ACATGT | 1 cut(s) | 29 |
| PkrI | GCNGC | 1 cut(s) | 216 |
| PscI | ACATGT | 1 cut(s) | 29 |
| Psp124BI | GAGCTC | 1 cut(s) | 205 |
| PspN4I | GGNNCC | 1 cut(s) | 84 |
| RsaI | GTAC | 2 cut(s) | 46, 128 |
| RsaNI | GTAC | 2 cut(s) | 45, 127 |
| SacI | GAGCTC | 1 cut(s) | 205 |
| SaqAI | TTAA | 2 cut(s) | 102, 161 |
| SatI | GCNGC | 1 cut(s) | 215 |
| Sau3AI | GATC | 1 cut(s) | 90 |
| SduI | GDGCHC | 1 cut(s) | 205 |
| SetI | ASST | 3 cut(s) | 84, 144, 205 |
| SfaNI | GCATC | 2 cut(s) | 136, 201 |
| SgeI | CNNG | 9 cut(s) | 36, 42, 66, 89, 98, 119, 124, 155, 162 |
| Sse9I | AATT | 2 cut(s) | 120, 178 |
| SsiI | CCGC | 1 cut(s) | 215 |
| SstI | GAGCTC | 1 cut(s) | 205 |
| TaqI | TCGA | 3 cut(s) | 23, 182, 221 |
| TasI | AATT | 2 cut(s) | 120, 178 |
| TauI | GCSGC | 1 cut(s) | 217 |
| Tru1I | TTAA | 2 cut(s) | 102, 161 |
| Tru9I | TTAA | 2 cut(s) | 102, 161 |
| XapI | RAATTY | 1 cut(s) | 120 |
| XceI | RCATGY | 1 cut(s) | 33 |